BLASTX nr result

ID: Paeonia24_contig00019270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00019270
         (342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    59   7e-07
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    59   9e-07
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    57   2e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    57   2e-06
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    57   3e-06
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    56   6e-06

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/108 (30%), Positives = 54/108 (50%)
 Frame = -1

Query: 336 ISWNIRGKGMHGYLYKIRYVNRISQPDVFFFCDTRDQIGSVDMYGY*SLFDGFLAVNSIG 157
           ++WN RG G    +  +R + + +   + F C+TR  +  +        F GF+ V+S G
Sbjct: 639 LAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEG 698

Query: 156 ILGGLALFWKRDVVELNVLKSHLRYIHVYIVKKSTGENTYCTFIYGYP 13
             GGLAL+W  + V ++V   + RYI  Y+         + TF+YG P
Sbjct: 699 KSGGLALYWD-ESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEP 745


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
 Frame = -1

Query: 342 KIISWNIRGKGMHGYLYKIRYVNRISQPDVFFFCDTRDQIGSVD-MYGY*SLFDGFLAVN 166
           +I+SWN +G G    +  +R +  +  P+V F C+T+ +   ++ + G+   FD    V 
Sbjct: 2   RILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFD-LHTVE 60

Query: 165 SIGILGGLALFWKRDVVELNVLKSHLRYIHVYIVKKSTGENTYCTFIYGYP 13
            IG  GGLAL WK D V++ VL+S  R I   ++ +   +  Y T IYG P
Sbjct: 61  PIGKSGGLALMWK-DSVQIKVLQSDKRLIDALLIWQD--KEFYLTCIYGEP 108


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/108 (30%), Positives = 52/108 (48%)
 Frame = -1

Query: 336 ISWNIRGKGMHGYLYKIRYVNRISQPDVFFFCDTRDQIGSVDMYGY*SLFDGFLAVNSIG 157
           +SWN RG G    + ++  + + +     F C+TR  +  +          GF  V+S G
Sbjct: 437 LSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDG 496

Query: 156 ILGGLALFWKRDVVELNVLKSHLRYIHVYIVKKSTGENTYCTFIYGYP 13
           + GGLALFW  + V + +L  + R+I  YI         + TF+YG P
Sbjct: 497 MSGGLALFW-HESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEP 543


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/108 (30%), Positives = 52/108 (48%)
 Frame = -1

Query: 336 ISWNIRGKGMHGYLYKIRYVNRISQPDVFFFCDTRDQIGSVDMYGY*SLFDGFLAVNSIG 157
           +SWN RG G    + ++  + + +     F C+TR  +  +          GF  V+S G
Sbjct: 465 LSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDG 524

Query: 156 ILGGLALFWKRDVVELNVLKSHLRYIHVYIVKKSTGENTYCTFIYGYP 13
           + GGLALFW  + V + +L  + R+I  YI         + TF+YG P
Sbjct: 525 MSGGLALFW-HESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEP 571


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/108 (33%), Positives = 57/108 (52%)
 Frame = -1

Query: 336 ISWNIRGKGMHGYLYKIRYVNRISQPDVFFFCDTRDQIGSVDMYGY*SLFDGFLAVNSIG 157
           +SWN RG G    + ++  + +  +P V F  +TR   G V+   +     G LAVN IG
Sbjct: 95  LSWNCRGLGRPRAVQELVCMVQTHRPKVVFLSETRQNQGFVENIKWQIGLRGCLAVNGIG 154

Query: 156 ILGGLALFWKRDVVELNVLKSHLRYIHVYIVKKSTGENTYCTFIYGYP 13
             GG+ALFW  + V + +   +LR+I   I +++  +    TF+YG P
Sbjct: 155 KGGGIALFWD-ESVNVTIKSYNLRHIDAVITEQNQ-DPWRATFVYGEP 200


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/111 (33%), Positives = 53/111 (47%)
 Frame = -1

Query: 342 KIISWNIRGKGMHGYLYKIRYVNRISQPDVFFFCDTRDQIGSVDMYGY*SLFDGFLAVNS 163
           K + WN RG G    + ++R + +   P V F  +T+     V+   Y   FD   AVNS
Sbjct: 2   KTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNS 61

Query: 162 IGILGGLALFWKRDVVELNVLKSHLRYIHVYIVKKSTGENTYCTFIYGYPD 10
            G  GGL LFW  DV  L  ++ +  Y    I+ +   E    +FIYG P+
Sbjct: 62  SGRSGGLGLFWNNDV--LLSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPN 110


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