BLASTX nr result

ID: Paeonia24_contig00018992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00018992
         (1436 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   514   e-143
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   502   e-139
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   502   e-139
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   500   e-139
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   497   e-138
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   492   e-136
ref|XP_007009964.1| Pseudouridine synthase family protein isofor...   490   e-136
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...   488   e-135
ref|XP_007009963.1| Pseudouridine synthase family protein isofor...   483   e-134
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   483   e-134
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   476   e-131
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              475   e-131
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   474   e-131
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   473   e-130
gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus...   472   e-130
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   471   e-130
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   469   e-129
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   468   e-129
ref|XP_007143753.1| hypothetical protein PHAVU_007G098900g [Phas...   456   e-125
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   454   e-125

>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  514 bits (1323), Expect = e-143
 Identities = 257/366 (70%), Positives = 296/366 (80%), Gaps = 2/366 (0%)
 Frame = -2

Query: 1279 SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQSGQLFIPWIVRDENGNLTLQ 1100
            ++  EFNI+FA                     + +  +PQS  L IPWIVRDENGNL +Q
Sbjct: 48   TTSAEFNISFAP--------------------KSKNPKPQSETLLIPWIVRDENGNLRVQ 87

Query: 1099 SQPPARFVQAMAFADXXXXXXXXXXXXXKD--AGAQPKHSKAARRFYNENFREPPQRLSK 926
            S PP R++Q MA A                     +PK+SKAARRFYNENFR+PPQRLSK
Sbjct: 88   STPPERYLQDMAKAKALSAKKKKKKEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSK 147

Query: 925  VLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYF 746
            VLAAAGVASRR+SEELIF+GRVTVNGSVCNTPQTRVDP RD+IYVNGNRLPKKLPPKVY 
Sbjct: 148  VLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYL 207

Query: 745  ALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVT 566
            ALNKPKGYICS+GEKESKSV+CLFD Y+KSW K+NPG+PKPR+FTVGRLDVATTGLII+T
Sbjct: 208  ALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILT 267

Query: 565  NDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPD 386
            NDGDFAQ+++HPSS++ KEYIATIDGVVNKRHL+A+S GTVIEG HC PDSVELLP  P+
Sbjct: 268  NDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPN 327

Query: 385  ISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQ 206
            IS+PRLR+VVHEGRNHEVRELVK+AGL I+SLKR+RIG F+LP DLG GK+VELKQGDL+
Sbjct: 328  ISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLK 387

Query: 205  NLGWKT 188
             LGWK+
Sbjct: 388  ALGWKS 393


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  502 bits (1292), Expect = e-139
 Identities = 268/394 (68%), Positives = 296/394 (75%), Gaps = 18/394 (4%)
 Frame = -2

Query: 1315 CFCRTRPSFRIF--SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQP--QSG-- 1154
            C  RT P  RI   SS  +FNI+FA                   P   +TQQ   +SG  
Sbjct: 26   CIHRTFPRSRITCSSSSLQFNISFAP------------------PKRKKTQQDDFESGEG 67

Query: 1153 ---QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAGAQ----- 998
               QLFIPWIVR E+GNL LQ+ PPAR V  +A A                A A      
Sbjct: 68   SEQQLFIPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGG 127

Query: 997  ----PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 830
                PK SKAARRFYN+NFR+ P+RLSKVLAAAGVASRRSSEELIFQG+VTVNGSVCNTP
Sbjct: 128  PKAAPKLSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTP 187

Query: 829  QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWG 650
            QTRVDP RDIIYVNG RLPKKLPPKVY ALNKPKGYICSAGEKE KSVM LFD Y+KSW 
Sbjct: 188  QTRVDPARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWD 247

Query: 649  KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRH 470
            KRNPGLP+PRLFTVGRLDVATTGLIIVTNDGDFAQ V+HPSS++ KEYIATIDG VNKRH
Sbjct: 248  KRNPGLPRPRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRH 307

Query: 469  LVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSL 290
            L+A+S GTVIEG+HC PD VELLP  PDI RPR+RIVVHEGRNHEVRELVKNAGL +YSL
Sbjct: 308  LIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSL 367

Query: 289  KRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWKT 188
            KR+RIG F+LP DLG+G +VELKQ DL+ +GWK+
Sbjct: 368  KRLRIGGFRLPSDLGIGMHVELKQSDLKLMGWKS 401


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
            gi|557538690|gb|ESR49734.1| hypothetical protein
            CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  502 bits (1292), Expect = e-139
 Identities = 268/394 (68%), Positives = 296/394 (75%), Gaps = 18/394 (4%)
 Frame = -2

Query: 1315 CFCRTRPSFRIF--SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQP--QSG-- 1154
            C  RT P  RI   SS  +FNI+FA                   P   +TQQ   +SG  
Sbjct: 76   CIHRTFPRSRITCSSSSLQFNISFAP------------------PKRKKTQQDDFESGEG 117

Query: 1153 ---QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAGAQ----- 998
               QLFIPWIVR E+GNL LQ+ PPAR V  +A A                A A      
Sbjct: 118  SEQQLFIPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGG 177

Query: 997  ----PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 830
                PK SKAARRFYN+NFR+ P+RLSKVLAAAGVASRRSSEELIFQG+VTVNGSVCNTP
Sbjct: 178  PKAAPKLSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTP 237

Query: 829  QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWG 650
            QTRVDP RDIIYVNG RLPKKLPPKVY ALNKPKGYICSAGEKE KSVM LFD Y+KSW 
Sbjct: 238  QTRVDPARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWD 297

Query: 649  KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRH 470
            KRNPGLP+PRLFTVGRLDVATTGLIIVTNDGDFAQ V+HPSS++ KEYIATIDG VNKRH
Sbjct: 298  KRNPGLPRPRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRH 357

Query: 469  LVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSL 290
            L+A+S GTVIEG+HC PD VELLP  PDI RPR+RIVVHEGRNHEVRELVKNAGL +YSL
Sbjct: 358  LIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSL 417

Query: 289  KRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWKT 188
            KR+RIG F+LP DLG+G +VELKQ DL+ +GWK+
Sbjct: 418  KRLRIGGFRLPSDLGIGMHVELKQSDLKLMGWKS 451


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
            gi|550332354|gb|EEE89362.2| hypothetical protein
            POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  500 bits (1287), Expect = e-139
 Identities = 270/393 (68%), Positives = 296/393 (75%), Gaps = 10/393 (2%)
 Frame = -2

Query: 1339 SPSILTKACFCRTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQ 1160
            S S+L K+     RP+ RI +S  EFNITFA                  LP+  QT    
Sbjct: 21   SLSLLNKSI----RPT-RITAS-LEFNITFAPPKPKPK-----------LPANLQTDAAS 63

Query: 1159 ----SGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAG---- 1004
                 GQLFIPWIVR E+GNL LQS PPAR + A+A A                      
Sbjct: 64   LSLPPGQLFIPWIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAK 123

Query: 1003 --AQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 830
              A+P  SKAARRFYNENFR+  QRLSKVLAAAGVASRRSSE LIF+G+VTVNGSVCNTP
Sbjct: 124  LEAEPTRSKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTP 183

Query: 829  QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWG 650
            QTRVDPGRD IYVNGNRLPKKLPPK+Y ALNKPKGYICS GEKESKSVMCL D Y +SW 
Sbjct: 184  QTRVDPGRDAIYVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWD 243

Query: 649  KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRH 470
            KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQ++AHPSS + KEYIAT+DGVV+KRH
Sbjct: 244  KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRH 303

Query: 469  LVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSL 290
            L A+S GTVIEG  C+PDSVELLP+ PD  RPRLRIVVHEGRNHEVRELVKNAGL I+SL
Sbjct: 304  LFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVRELVKNAGLEIHSL 363

Query: 289  KRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWK 191
            KRVRIG F+LP DLGLGK+ ELKQ DL+ LGWK
Sbjct: 364  KRVRIGGFRLPSDLGLGKHAELKQTDLKTLGWK 396


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  497 bits (1279), Expect = e-138
 Identities = 257/382 (67%), Positives = 290/382 (75%), Gaps = 9/382 (2%)
 Frame = -2

Query: 1306 RTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQ-----SGQLFI 1142
            RT  +  + SS T+FNITFA                      D    P        QL+I
Sbjct: 32   RTFITSSLSSSSTKFNITFAPPKPKPKPKPEPAIPINSDSDSDSNSVPNLEAEIGDQLYI 91

Query: 1141 PWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAGA----QPKHSKAAR 974
            PWIVRDE GNLTLQS PPAR +  MA A              K A      +PKHSKAAR
Sbjct: 92   PWIVRDEKGNLTLQSTPPARLLHEMANASTSKKKKKGKEVASKAATVVPTPEPKHSKAAR 151

Query: 973  RFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIY 794
            RFYNENFR+PPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVC TPQT+VDP RD+IY
Sbjct: 152  RFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIY 211

Query: 793  VNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLF 614
            VNGNRLPKKLP KVY ALNKPKGYICS+GEKE+KSVM LFD ++KSW KR+PG PKPRLF
Sbjct: 212  VNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLF 271

Query: 613  TVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEG 434
            TVGRLDVATTGLIIVTNDG+F  +++HPSS + KEYIATIDG V+KRHL+A+S GTVI+G
Sbjct: 272  TVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIAISEGTVIDG 331

Query: 433  SHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPP 254
             HCIPD+VELLP  PD+SRPRLRIVVHEGRNHEVRELVKNAGL + +LKR+RIG F+LP 
Sbjct: 332  VHCIPDNVELLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPA 391

Query: 253  DLGLGKYVELKQGDLQNLGWKT 188
            DL LGK+VEL Q +L+ LGWK+
Sbjct: 392  DLALGKHVELNQANLKALGWKS 413


>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Solanum lycopersicum]
          Length = 414

 Score =  492 bits (1267), Expect = e-136
 Identities = 254/383 (66%), Positives = 292/383 (76%), Gaps = 10/383 (2%)
 Frame = -2

Query: 1306 RTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQS------GQLF 1145
            RT  +  + SS T+FNITFA                 +  S+  +    +       QL+
Sbjct: 32   RTFITSSLSSSSTKFNITFAPPKPKPKTKPEPAIPIINPNSDSNSDSVPNLDAEVGDQLY 91

Query: 1144 IPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAGA----QPKHSKAA 977
            IPWIVRDE GNLTLQS PPAR +  MA A              K A      +PKHSKAA
Sbjct: 92   IPWIVRDEKGNLTLQSTPPARLLHEMANASTGKKKKKGKEVASKAATVVPTPEPKHSKAA 151

Query: 976  RRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDII 797
            RRFYNENFR+PPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVC TPQT+VDP RD+I
Sbjct: 152  RRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVI 211

Query: 796  YVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRL 617
            YVNGNRLPKKLP KVY ALNKPKGYICS+GEKE+KSVM LFD ++KSW KR+PG PKPRL
Sbjct: 212  YVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRL 271

Query: 616  FTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIE 437
            FTVGRLDVATTGLIIVTNDG+F  +++HPSS + KEYIATIDG V+KRHL+A+S GT+I+
Sbjct: 272  FTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIAISEGTIID 331

Query: 436  GSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLP 257
            G HC PD+VELLP  PD+SRPRLRIVVHEGRNHEVRELVKNAGL + +LKR+RIG F+LP
Sbjct: 332  GVHCTPDNVELLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLP 391

Query: 256  PDLGLGKYVELKQGDLQNLGWKT 188
             DL LGK+VEL Q +L+ LGWK+
Sbjct: 392  ADLALGKHVELNQANLKALGWKS 414


>ref|XP_007009964.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
            cacao] gi|508726877|gb|EOY18774.1| Pseudouridine synthase
            family protein isoform 2, partial [Theobroma cacao]
          Length = 398

 Score =  490 bits (1261), Expect = e-136
 Identities = 253/374 (67%), Positives = 286/374 (76%), Gaps = 10/374 (2%)
 Frame = -2

Query: 1279 SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQ-PQSGQLFIPWIVRDENGNLTL 1103
            SS  +FNITFA                  +  + ++   P +GQLFIPWIVR E+GNL L
Sbjct: 25   SSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGNLKL 84

Query: 1102 QSQPPARFVQAMAFA---------DXXXXXXXXXXXXXKDAGAQPKHSKAARRFYNENFR 950
            Q+ PPAR + A+A A         D               +   PK SKAARRFYNENF 
Sbjct: 85   QAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNENFT 144

Query: 949  EPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPK 770
            EPPQRLSKVLAAAGVASRR SEELIF G+VTVNGSVCN PQTRVDP +DIIYVNG+RLPK
Sbjct: 145  EPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKDIIYVNGSRLPK 204

Query: 769  KLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLFTVGRLDVA 590
            KLPPK+Y ALNKPKGYICS+GEKE KSV+ LF+ Y+K W K N G PKPRLFTVGRLDVA
Sbjct: 205  KLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPKPRLFTVGRLDVA 264

Query: 589  TTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEGSHCIPDSV 410
            TTGLIIVTNDGDFAQ+++HPSS + KEYIATIDG V KRHL+A+S GT IEG HCIPDSV
Sbjct: 265  TTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGTEIEGIHCIPDSV 324

Query: 409  ELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPPDLGLGKYV 230
            ELLP+ PD+SRPRLRIVVHEGRNHEVRELVKNAGL I+SLKRVRIG F+LP DLGLGK+V
Sbjct: 325  ELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPADLGLGKHV 384

Query: 229  ELKQGDLQNLGWKT 188
            ELKQ DL+ +GWK+
Sbjct: 385  ELKQSDLRAMGWKS 398


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
            gi|462414524|gb|EMJ19261.1| hypothetical protein
            PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  488 bits (1257), Expect = e-135
 Identities = 251/364 (68%), Positives = 288/364 (79%)
 Frame = -2

Query: 1279 SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQSGQLFIPWIVRDENGNLTLQ 1100
            SS  EFNITFA                    S +   +  +GQL IPWIVR E+GNL LQ
Sbjct: 43   SSSLEFNITFAPSKPKPKLKPD---------SAEPDPEALAGQLIIPWIVRGEDGNLKLQ 93

Query: 1099 SQPPARFVQAMAFADXXXXXXXXXXXXXKDAGAQPKHSKAARRFYNENFREPPQRLSKVL 920
            S PPARF+QA+                   A  +PK+SKAARRFYNENFR+  QRLSKVL
Sbjct: 94   SHPPARFLQAIETKSKTKKKKEGAEKRVPTA--EPKYSKAARRFYNENFRDASQRLSKVL 151

Query: 919  AAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFAL 740
            AAAGVASRRSSE+LIF G+VTVNGSVCNTPQ+RVDPGRDIIYVNGNRLPK+LPPKVY AL
Sbjct: 152  AAAGVASRRSSEQLIFDGKVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLPPKVYLAL 211

Query: 739  NKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTND 560
            NKPKGYIC++GE  +KSV+ LF+ Y+K+W KRN G+P+PRLFTVGRLDVATTGLIIVTND
Sbjct: 212  NKPKGYICASGE--NKSVLSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATTGLIIVTND 269

Query: 559  GDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDIS 380
            GDFAQ+++HPSS + KEYIA I+GVV+KRHL+A+S GTVIEG HC PDSVELLP+ PD+S
Sbjct: 270  GDFAQKISHPSSNLSKEYIAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVELLPQQPDMS 329

Query: 379  RPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNL 200
            RPRLRIVVHEGRNHEVRELVKNAGL I+SLKRVRIG F+LP DLGLGK++ LKQGDL  L
Sbjct: 330  RPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHMALKQGDLSAL 389

Query: 199  GWKT 188
            GWK+
Sbjct: 390  GWKS 393


>ref|XP_007009963.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508726876|gb|EOY18773.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  483 bits (1244), Expect = e-134
 Identities = 253/380 (66%), Positives = 286/380 (75%), Gaps = 16/380 (4%)
 Frame = -2

Query: 1279 SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQ-PQSGQLFIPWIVRDENGNLTL 1103
            SS  +FNITFA                  +  + ++   P +GQLFIPWIVR E+GNL L
Sbjct: 74   SSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGNLKL 133

Query: 1102 QSQPPARFVQAMAFA---------DXXXXXXXXXXXXXKDAGAQPKHSKAARRFYNENFR 950
            Q+ PPAR + A+A A         D               +   PK SKAARRFYNENF 
Sbjct: 134  QAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNENFT 193

Query: 949  EPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQ------TRVDPGRDIIYVN 788
            EPPQRLSKVLAAAGVASRR SEELIF G+VTVNGSVCN PQ      TRVDP +DIIYVN
Sbjct: 194  EPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQTRVDPAKDIIYVN 253

Query: 787  GNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLFTV 608
            G+RLPKKLPPK+Y ALNKPKGYICS+GEKE KSV+ LF+ Y+K W K N G PKPRLFTV
Sbjct: 254  GSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPKPRLFTV 313

Query: 607  GRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEGSH 428
            GRLDVATTGLIIVTNDGDFAQ+++HPSS + KEYIATIDG V KRHL+A+S GT IEG H
Sbjct: 314  GRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGTEIEGIH 373

Query: 427  CIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPPDL 248
            CIPDSVELLP+ PD+SRPRLRIVVHEGRNHEVRELVKNAGL I+SLKRVRIG F+LP DL
Sbjct: 374  CIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPADL 433

Query: 247  GLGKYVELKQGDLQNLGWKT 188
            GLGK+VELKQ DL+ +GWK+
Sbjct: 434  GLGKHVELKQSDLRAMGWKS 453


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  483 bits (1243), Expect = e-134
 Identities = 252/364 (69%), Positives = 279/364 (76%)
 Frame = -2

Query: 1279 SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQSGQLFIPWIVRDENGNLTLQ 1100
            SS  EFNITFA                 D  S         GQLFIPWIVR E+GNL LQ
Sbjct: 45   SSSLEFNITFAPPKPKPKSEVEDPFQFIDRNS--------GGQLFIPWIVRGEDGNLKLQ 96

Query: 1099 SQPPARFVQAMAFADXXXXXXXXXXXXXKDAGAQPKHSKAARRFYNENFREPPQRLSKVL 920
            S PP RF+ +++  +             K     PKHSKAARRFYNEN RE  QRLSKVL
Sbjct: 97   SHPPTRFLHSVS--EDETKPKKKKVSAGKPITEPPKHSKAARRFYNENIRESSQRLSKVL 154

Query: 919  AAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFAL 740
            AAAGVASRRSSEELIF GRVTVNGSVCNTPQTRVDP RDIIYVNGNRLPKKLPPKVY AL
Sbjct: 155  AAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLAL 214

Query: 739  NKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTND 560
            NKPKGYICS+G+KESKSV+ LFD Y+KSW K  PG PKPRLFTVGRLDVATTGLIIVTND
Sbjct: 215  NKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTND 274

Query: 559  GDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDIS 380
            GDFAQ ++HPSS + KEYIA IDG V+K++L+A+S GT+I+G HC PDSVELLP+ PDIS
Sbjct: 275  GDFAQGISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDIS 334

Query: 379  RPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNL 200
            + RLRIVVHEGRNHEVRELVK AGL IYSLKRVRIG F+LP DLGLG Y ELKQ +L+ +
Sbjct: 335  KSRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAI 394

Query: 199  GWKT 188
            GWK+
Sbjct: 395  GWKS 398


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  476 bits (1225), Expect = e-131
 Identities = 254/372 (68%), Positives = 282/372 (75%), Gaps = 8/372 (2%)
 Frame = -2

Query: 1279 SSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQSG-----QLFIPWIVRDENG 1115
            SS  EFNITFA                   P  D    P S      QLFIPWIVR E+G
Sbjct: 35   SSSLEFNITFAPAPK---------------PKPDPNSLPASSSSSGQQLFIPWIVRGEDG 79

Query: 1114 NLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAG---AQPKHSKAARRFYNENFREP 944
             L LQS PPAR +  MA AD             K      A+PKHSKAARRFYNENFRE 
Sbjct: 80   KLKLQSHPPARLLHEMAQADTKTKSKKNKDTAQKKQRVLTAEPKHSKAARRFYNENFRES 139

Query: 943  PQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKL 764
             QRLSKVLAAAGVASRRSSE+LIF G+VTVNGSVCNTPQT VDPGRDIIYVNGNRLPKKL
Sbjct: 140  -QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPVDPGRDIIYVNGNRLPKKL 198

Query: 763  PPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRLFTVGRLDVATT 584
            PPKVY ALNKPKGYIC+AGEK  KSV+ LFD Y+KSW KRNPG P+PRLFTVGRLDVATT
Sbjct: 199  PPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWDKRNPGTPRPRLFTVGRLDVATT 256

Query: 583  GLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIEGSHCIPDSVEL 404
            GLI+VTNDGDFAQ ++HPS+ + KEYIA I+G V+K+ L+A+S GTVI+G HC PDSVEL
Sbjct: 257  GLIVVTNDGDFAQSISHPSANLTKEYIAVIEGSVSKKSLIAISEGTVIDGVHCTPDSVEL 316

Query: 403  LPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLPPDLGLGKYVEL 224
            LP+ P+ISR RLRIVVHEGRNHEVRELVK AGL I+SLKRVRIG F+LP +LGLG ++EL
Sbjct: 317  LPQQPEISRSRLRIVVHEGRNHEVRELVKKAGLEIHSLKRVRIGGFRLPTNLGLGTHMEL 376

Query: 223  KQGDLQNLGWKT 188
            +QGDL  LGWKT
Sbjct: 377  RQGDLSALGWKT 388


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  475 bits (1222), Expect = e-131
 Identities = 226/271 (83%), Positives = 256/271 (94%)
 Frame = -2

Query: 1000 QPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTR 821
            +PK+SKAARRFYNENFR+PPQRLSKVLAAAGVASRR+SEELIF+GRVTVNGSVCNTPQTR
Sbjct: 26   EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 820  VDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRN 641
            VDP RD+IYVNGNRLPKKLPPKVY ALNKPKGYICS+GEKESKSV+CLFD Y+KSW K+N
Sbjct: 86   VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 640  PGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVA 461
            PG+PKPR+FTVGRLDVATTGLII+TNDGDFAQ+++HPSS++ KEYIATIDGVVNKRHL+A
Sbjct: 146  PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 205

Query: 460  LSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRV 281
            +S GTVIEG HC PDSVELLP  P+IS+PRLR+VVHEGRNHEVRELVK+AGL I+SLKR+
Sbjct: 206  ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 265

Query: 280  RIGSFKLPPDLGLGKYVELKQGDLQNLGWKT 188
            RIG F+LP DLG GK+VELKQGDL+ LGWK+
Sbjct: 266  RIGGFRLPSDLGHGKHVELKQGDLKALGWKS 296


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  474 bits (1220), Expect = e-131
 Identities = 252/403 (62%), Positives = 294/403 (72%), Gaps = 17/403 (4%)
 Frame = -2

Query: 1345 HFSPSILTKACFCRTRPSFR---------IFSSHTEFNITFAXXXXXXXXXXXXXXXXPD 1193
            H S S+L+ +     RPS R         + SS +EFNI+FA                 +
Sbjct: 14   HLSSSLLSLSSLS-LRPSIRHILPRVLCSLSSSTSEFNISFAPAKPKPQP---------E 63

Query: 1192 LPSEDQTQQPQSGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXK 1013
                D        QLFIPWI+R ++GNL LQS PPAR + AMA AD             K
Sbjct: 64   ATEVDSLFGADGSQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAEK 123

Query: 1012 D--------AGAQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVT 857
                     + A+PK+SKAARRFYNENFRE  QRLSKVLAAAGVASRR+SEELI +GRVT
Sbjct: 124  KKKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVT 183

Query: 856  VNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCL 677
            VNGSVCNTPQTRVDP +D+IYVNGNRLPK+LPPKVY ALNKPKGYICS G+K  KSVM L
Sbjct: 184  VNGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMSL 241

Query: 676  FDAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIAT 497
            FD Y+K W KRN G  KPRLFTVGRLDVATTGLIIVTNDGDFAQ+++HPSS + KEYIAT
Sbjct: 242  FDDYLKIWDKRNLGQSKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIAT 301

Query: 496  IDGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVK 317
            I+G V+K+HL+ +S GT I+G HC+PDSVELLP  P++ RPRLR+VVH+GR HEVREL+K
Sbjct: 302  IEGTVSKKHLLVISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVRELMK 361

Query: 316  NAGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWKT 188
            NAGL I+SLKRVRIG ++LP DLGLGK+VELKQGDL  LGWK+
Sbjct: 362  NAGLEIHSLKRVRIGGYRLPSDLGLGKHVELKQGDLSALGWKS 404


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  473 bits (1216), Expect = e-130
 Identities = 237/341 (69%), Positives = 271/341 (79%), Gaps = 20/341 (5%)
 Frame = -2

Query: 1153 QLFIPWIVRDENGNLTLQSQPPARFVQAMAF---------ADXXXXXXXXXXXXXKDAGA 1001
            QLFIPWIVR ++G L LQSQPPAR +  +A           D               A A
Sbjct: 71   QLFIPWIVRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATA 130

Query: 1000 -----------QPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTV 854
                       +PK SKAARRFYNENF+EPPQRLSKVLAAAGVASRR+SEELIF G+VTV
Sbjct: 131  SASSPASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTV 190

Query: 853  NGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLF 674
            NG +CNTPQTRVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KSV+ LF
Sbjct: 191  NGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLF 250

Query: 673  DAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATI 494
            D Y+ SW KRNPG PKPRLFTVGRLDVATTGLI+VTNDGDFAQ+++HPSS + KEYI T+
Sbjct: 251  DEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTV 310

Query: 493  DGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKN 314
             G ++KRHL+A+S GT++EG HC+PDSVEL+PK  DI R RLRIVVHEGRNHEVRELVKN
Sbjct: 311  VGDIHKRHLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKN 370

Query: 313  AGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWK 191
            AGL ++SLKRVRIG F+LP DLGLGK+VELKQ +L+ +GWK
Sbjct: 371  AGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMGWK 411


>gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus guttatus]
          Length = 409

 Score =  472 bits (1215), Expect = e-130
 Identities = 250/400 (62%), Positives = 288/400 (72%), Gaps = 18/400 (4%)
 Frame = -2

Query: 1342 FSPSILTKACFCRTRPSFRIF----------SSHTEFNITFAXXXXXXXXXXXXXXXXPD 1193
            F+   L+K  F   R  FR            ++  EF ITFA                  
Sbjct: 11   FTTLHLSKTSFILPRRHFRTVITSSLSTTTTTAAAEFKITFAPPKPKP-----------Q 59

Query: 1192 LPSEDQTQQP---QSGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXX 1022
            L   D T  P      QL +PWI+RDENGN++LQ  PP RF++AMA              
Sbjct: 60   LQKSDPTNAPGIDSGDQLLVPWILRDENGNISLQKMPPQRFLKAMANESTQKKKKRDDKT 119

Query: 1021 XXKDAGA-----QPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVT 857
              K A A     +PK+SKAARRFYNE FREPPQRL+KVLA AGVASRRSSEELIFQG+VT
Sbjct: 120  PAKKAKAAMQYVEPKYSKAARRFYNERFREPPQRLAKVLATAGVASRRSSEELIFQGKVT 179

Query: 856  VNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCL 677
            VNGSVCNTPQTRVDP RDIIYVNG+RL KKLPPKVY ALNKPKGYICSAGE+E+KSV  L
Sbjct: 180  VNGSVCNTPQTRVDPARDIIYVNGSRLAKKLPPKVYLALNKPKGYICSAGEEETKSVFSL 239

Query: 676  FDAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIAT 497
            FD +MK W KRNPG+PKPRLFTVGRLDVATTGLIIVTNDG+FA +V+HPSS + KEYIAT
Sbjct: 240  FDDFMKGWDKRNPGIPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIAT 299

Query: 496  IDGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVK 317
            I+G V KR+L+ +S GT +EG  C+PDSVELLP+ PDISRPRLRIVVHEGRNHEVRELVK
Sbjct: 300  INGAVTKRNLLTISEGTFVEGVKCVPDSVELLPQQPDISRPRLRIVVHEGRNHEVRELVK 359

Query: 316  NAGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNLG 197
            NAGL I++LKR+RIG F+LP DL LGK++EL    ++ LG
Sbjct: 360  NAGLQIHALKRIRIGGFRLPSDLALGKHIELTPAHMRALG 399


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
            gi|482562896|gb|EOA27086.1| hypothetical protein
            CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  471 bits (1211), Expect = e-130
 Identities = 237/341 (69%), Positives = 269/341 (78%), Gaps = 20/341 (5%)
 Frame = -2

Query: 1153 QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAGAQ-------- 998
            QLFIPWIVR ++G L LQSQPPAR + ++A                K   A         
Sbjct: 115  QLFIPWIVRGDDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASS 174

Query: 997  ------------PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTV 854
                        PK SKAARRFYNENF+EPPQRLSKVLAAAGVASRR+SEELIF G+VTV
Sbjct: 175  SASASSPPPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTV 234

Query: 853  NGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLF 674
            NG +CNTPQTRVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KSV+ LF
Sbjct: 235  NGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLF 294

Query: 673  DAYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATI 494
            D YM SW KRNPG PKPRLFTVGRLDVATTGLIIVTNDGDFAQ+++HPSS + KEYI T+
Sbjct: 295  DEYMASWDKRNPGTPKPRLFTVGRLDVATTGLIIVTNDGDFAQQLSHPSSSLPKEYITTV 354

Query: 493  DGVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKN 314
             G ++KRHL+A+S GT++EG HC+PD VEL+PK  DI R RLRIVVHEGRNHEVRELVKN
Sbjct: 355  VGDIHKRHLMAISEGTIVEGVHCVPDLVELMPKQHDIPRARLRIVVHEGRNHEVRELVKN 414

Query: 313  AGLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWK 191
            AGL+++SLKRVRIG F+LP DLGLGK+ ELKQ +L+ LGWK
Sbjct: 415  AGLVVHSLKRVRIGGFRLPSDLGLGKHAELKQSELKVLGWK 455


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
            gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana]
            gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis
            thaliana] gi|330254545|gb|AEC09639.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 410

 Score =  469 bits (1207), Expect = e-129
 Identities = 234/340 (68%), Positives = 268/340 (78%), Gaps = 19/340 (5%)
 Frame = -2

Query: 1153 QLFIPWIVRDENGNLTLQSQPPARFVQAMAF-------------------ADXXXXXXXX 1031
            QLFIPWIVR ++G L LQSQPPAR +  +A                    A         
Sbjct: 70   QLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTT 129

Query: 1030 XXXXXKDAGAQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVN 851
                   +  +PK SKAARRFYNENF+E PQRLSKVLAAAGVASRR+SEELIF G+VTVN
Sbjct: 130  ASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVN 189

Query: 850  GSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFD 671
            G +CNTPQTRVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KS + LFD
Sbjct: 190  GILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFD 249

Query: 670  AYMKSWGKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATID 491
             Y+ SW KRNPG PKPRLFTVGRLDVATTGLI+VTNDGDFAQ+++HPSS + KEYI T+ 
Sbjct: 250  EYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVV 309

Query: 490  GVVNKRHLVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNA 311
            G ++KRHL+A+S GT++EG HC+PDSVEL+PK  DI R RLRIVVHEGRNHEVRELVKNA
Sbjct: 310  GDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNA 369

Query: 310  GLMIYSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWK 191
            GL ++SLKRVRIG F+LP DLGLGK+VELKQ +L+ LGWK
Sbjct: 370  GLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGWK 409


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
            gi|557112308|gb|ESQ52592.1| hypothetical protein
            EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  468 bits (1203), Expect = e-129
 Identities = 232/334 (69%), Positives = 271/334 (81%), Gaps = 12/334 (3%)
 Frame = -2

Query: 1153 QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKD------------ 1010
            QLFIPWIVR E+G L +QSQPPAR + A+A A              K             
Sbjct: 70   QLFIPWIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSASTPSSPA 129

Query: 1009 AGAQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 830
            + ++PK SKAARRFYNENF++PPQRLSKVLAAAGVASRR+SEELIF G+VTVNGS+C  P
Sbjct: 130  SHSKPKLSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAP 189

Query: 829  QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWG 650
            Q RVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KSV+ LFD ++ SW 
Sbjct: 190  QIRVDPTRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWD 249

Query: 649  KRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRH 470
            KRNPG PKPRLFTVGRLDVATTGLI+VTNDGDFAQ+++HPSS + KEYI T+ G V+KRH
Sbjct: 250  KRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDVHKRH 309

Query: 469  LVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSL 290
            L+ +S GT++EG HC+PDSVEL+PK  DI R RLRIVVHEGRNHEVRE+VKNAGL ++SL
Sbjct: 310  LMTISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVREIVKNAGLEVHSL 369

Query: 289  KRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWKT 188
            KRVRIG F+LP DLGLGK+VELKQ +L+ +GWK+
Sbjct: 370  KRVRIGGFRLPSDLGLGKHVELKQSELKAMGWKS 403


>ref|XP_007143753.1| hypothetical protein PHAVU_007G098900g [Phaseolus vulgaris]
            gi|561016943|gb|ESW15747.1| hypothetical protein
            PHAVU_007G098900g [Phaseolus vulgaris]
          Length = 403

 Score =  456 bits (1173), Expect = e-125
 Identities = 240/397 (60%), Positives = 285/397 (71%), Gaps = 21/397 (5%)
 Frame = -2

Query: 1315 CFCRTRP----SFRI-------FSSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQ 1169
            CF ++      SFRI       FSS   FNI+FA                   P  D + 
Sbjct: 15   CFSKSHTLSLASFRILPRLTCSFSSSINFNISFAPPKPKPKPNNLH-------PHPDLSN 67

Query: 1168 QPQSGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXKDAG----- 1004
            +P  G L IPWIVR E+GNL LQS+PP   + A+A A                A      
Sbjct: 68   EPD-GPLLIPWIVRGEDGNLKLQSEPPPSLLNAIATAQTGTRKDSNQKTKTTAATTKPQK 126

Query: 1003 ----AQPKHSKAARRFYNENFREPP-QRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVC 839
                A P+HSKAARRFYN+N +E    RLSKVLAA+GVASRRS EELIF+G+VTVNGSVC
Sbjct: 127  IRATAPPQHSKAARRFYNQNIKESSGARLSKVLAASGVASRRSCEELIFEGKVTVNGSVC 186

Query: 838  NTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMK 659
            NTPQTRVDP +D+IYVNGNRLPK+ P KVY ALNKPKGYICS+GE ESKSV+ LFD ++ 
Sbjct: 187  NTPQTRVDPAKDVIYVNGNRLPKRQPQKVYLALNKPKGYICSSGENESKSVISLFDDFLN 246

Query: 658  SWGKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVN 479
            +WGK+ PG+P PRLFTVGRLDVATTGLIIVTNDGDFAQ+++HPSS + KEYIAT+DG+V 
Sbjct: 247  TWGKKRPGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATVDGLVY 306

Query: 478  KRHLVALSAGTVIEGSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMI 299
            KRHL+A+S GT IEG HC+PD+VE+LP+  D+ R R+RIVVHEGR HEVRELVKNAGL I
Sbjct: 307  KRHLMAISEGTTIEGVHCVPDAVEILPRQADMQRARIRIVVHEGRKHEVRELVKNAGLEI 366

Query: 298  YSLKRVRIGSFKLPPDLGLGKYVELKQGDLQNLGWKT 188
            +SLKR+RIG F+LPPDLGLGKY+EL   +L  LGWK+
Sbjct: 367  HSLKRIRIGGFRLPPDLGLGKYIELNPTNLNALGWKS 403


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cicer arietinum]
          Length = 410

 Score =  454 bits (1169), Expect = e-125
 Identities = 235/380 (61%), Positives = 277/380 (72%), Gaps = 10/380 (2%)
 Frame = -2

Query: 1306 RTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXPDLPSEDQTQQPQSGQLFIPWIVR 1127
            RT P F   SS  +FNI+F+                    S +Q      GQL IPWIVR
Sbjct: 27   RTLPRFTCSSSPFKFNISFSPSKPKPNPKPEP-----QTESPNQFPDDNEGQLIIPWIVR 81

Query: 1126 DENGNLTLQSQPPARFVQAMA----------FADXXXXXXXXXXXXXKDAGAQPKHSKAA 977
             E+GN  L S+PP  F++AMA                            A A P++SKAA
Sbjct: 82   GEDGNFKLLSEPPPSFLKAMANDKTGTKKSDKNQTTKNKKKSENETKVRATAPPQYSKAA 141

Query: 976  RRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDII 797
            RRFYNENF++   RLSKVLAA+GVASRRS E+LIF+G+VTVNGSVCNTPQTRVDP +D+I
Sbjct: 142  RRFYNENFKDSGTRLSKVLAASGVASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVI 201

Query: 796  YVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSWGKRNPGLPKPRL 617
            YVNG+RLPK+ P KVY ALNKPKGYICS+GEKESKSV+ LFD ++ SW K++PG+P PRL
Sbjct: 202  YVNGSRLPKRQPHKVYLALNKPKGYICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRL 261

Query: 616  FTVGRLDVATTGLIIVTNDGDFAQRVAHPSSEVLKEYIATIDGVVNKRHLVALSAGTVIE 437
            FTVGRLDVATTGL+IVTNDGDFAQR++HPSS   KEYIAT++G+V+KRHL A+S GT IE
Sbjct: 262  FTVGRLDVATTGLLIVTNDGDFAQRLSHPSSNFSKEYIATVNGLVHKRHLTAISEGTTIE 321

Query: 436  GSHCIPDSVELLPKLPDISRPRLRIVVHEGRNHEVRELVKNAGLMIYSLKRVRIGSFKLP 257
            G HC+PDSVELLP +PD  R RLRIVVH+GR HEVRELVKNAGL I+SLKRVRIG F+LP
Sbjct: 322  GVHCVPDSVELLPSMPDAQRARLRIVVHDGRKHEVRELVKNAGLEIHSLKRVRIGGFRLP 381

Query: 256  PDLGLGKYVELKQGDLQNLG 197
            PDLGLGKY+EL    L+ LG
Sbjct: 382  PDLGLGKYIELNPTKLKALG 401


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