BLASTX nr result

ID: Paeonia24_contig00018251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00018251
         (678 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...    91   3e-16
emb|CBI37849.3| unnamed protein product [Vitis vinifera]               91   3e-16
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag...    82   2e-13
ref|XP_007201184.1| hypothetical protein PRUPE_ppa003064mg [Prun...    80   5e-13
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...    79   2e-12
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu...    78   3e-12
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu...    75   2e-11
ref|XP_007041784.1| Splicing factor isoform 3 [Theobroma cacao] ...    66   1e-08
ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao] ...    66   1e-08
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...    64   5e-08
gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus...    63   8e-08
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops...    63   1e-07
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops...    63   1e-07
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]         63   1e-07
ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis ...    63   1e-07
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps...    62   2e-07
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab...    62   2e-07
ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutr...    61   4e-07
ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isofo...    60   8e-07
ref|XP_006486688.1| PREDICTED: RNA-binding protein 39-like isofo...    60   8e-07

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 44/64 (68%), Positives = 50/64 (78%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYHRSK 321
           MDFDEYDYLEKTVENPE  K+ +T NGGDETVKSGEKE      H+ +DND+DLD  R K
Sbjct: 1   MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLD-RRLK 59

Query: 322 RAKS 333
           R+KS
Sbjct: 60  RSKS 63


>emb|CBI37849.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 44/64 (68%), Positives = 50/64 (78%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYHRSK 321
           MDFDEYDYLEKTVENPE  K+ +T NGGDETVKSGEKE      H+ +DND+DLD  R K
Sbjct: 1   MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLD-RRLK 59

Query: 322 RAKS 333
           R+KS
Sbjct: 60  RSKS 63


>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
           vesca]
          Length = 588

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYHRSK 321
           MDFDEYDYLEKTVENPEP    + ANGGDET+KSG+K       HR DD D D +  RSK
Sbjct: 1   MDFDEYDYLEKTVENPEPLASKENANGGDETLKSGDKGRSRSSKHRSDDKDHDGE-RRSK 59

Query: 322 RAKS 333
           R+KS
Sbjct: 60  RSKS 63


>ref|XP_007201184.1| hypothetical protein PRUPE_ppa003064mg [Prunus persica]
           gi|462396584|gb|EMJ02383.1| hypothetical protein
           PRUPE_ppa003064mg [Prunus persica]
          Length = 607

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 39/64 (60%), Positives = 47/64 (73%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYHRSK 321
           MDFDEY+YLEKTVENPEP K  +TANGG+ET+KSGEK       H+ D+   D + H SK
Sbjct: 1   MDFDEYEYLEKTVENPEPQKAKETANGGEETLKSGEKGRSRSSKHKSDEKGHDEERH-SK 59

Query: 322 RAKS 333
           R+KS
Sbjct: 60  RSKS 63


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDE-DLDYHRS 318
           MDFDEY+YLEKTVENPEP K  + ANGGD  +KSGEK+      HR ++ D+ D D  RS
Sbjct: 1   MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS 60

Query: 319 KRAKS 333
           KR KS
Sbjct: 61  KRPKS 65


>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
           gi|550341316|gb|EEE86704.2| hypothetical protein
           POPTR_0004s18320g [Populus trichocarpa]
          Length = 609

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDND--EDLDYHR 315
           M+FDEYDYLEKTVEN EPPK  +TANGGD+ VKS EK+      HR D+ D   D +  R
Sbjct: 1   MEFDEYDYLEKTVENLEPPKAKETANGGDDKVKSREKDRSRSSKHRSDEKDLGNDDERSR 60

Query: 316 SKRAKS 333
           SKR++S
Sbjct: 61  SKRSRS 66


>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
           gi|550331684|gb|EEE86903.2| hypothetical protein
           POPTR_0009s13940g [Populus trichocarpa]
          Length = 599

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDE-DLDYHRS 318
           M+FDEYDYLEKTVENPEPPK+ +TANG  + VKS EK+       R DD D+ D +  RS
Sbjct: 1   MEFDEYDYLEKTVENPEPPKVRETANGEGDIVKSREKDRLRSSKRRSDDKDDGDDERRRS 60

Query: 319 KRAKS 333
           K+++S
Sbjct: 61  KQSRS 65


>ref|XP_007041784.1| Splicing factor isoform 3 [Theobroma cacao]
           gi|508705719|gb|EOX97615.1| Splicing factor isoform 3
           [Theobroma cacao]
          Length = 545

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDL--DYHR 315
           MDFDEY+YLEKTVEN EP K  +  NGG ++VKS E+       H+ ++  +D   ++ R
Sbjct: 1   MDFDEYEYLEKTVENTEPQKAKEDGNGGIDSVKSEERNRSRSSKHKREERADDYENEHRR 60

Query: 316 SKRAKS 333
           SKR+KS
Sbjct: 61  SKRSKS 66


>ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao]
           gi|590684187|ref|XP_007041783.1| Splicing factor isoform
           1 [Theobroma cacao] gi|508705717|gb|EOX97613.1| Splicing
           factor isoform 1 [Theobroma cacao]
           gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
           [Theobroma cacao]
          Length = 581

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDL--DYHR 315
           MDFDEY+YLEKTVEN EP K  +  NGG ++VKS E+       H+ ++  +D   ++ R
Sbjct: 1   MDFDEYEYLEKTVENTEPQKAKEDGNGGIDSVKSEERNRSRSSKHKREERADDYENEHRR 60

Query: 316 SKRAKS 333
           SKR+KS
Sbjct: 61  SKRSKS 66


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYH 312
           MDFDEY+YLEK VENPE   +N  ANGGD+ VKS E+       H+ DD+D+ +D H
Sbjct: 1   MDFDEYEYLEKAVENPE---VNHRANGGDKNVKSEERGRNGSSKHKDDDDDDVVDLH 54


>gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus guttatus]
          Length = 600

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 32/64 (50%), Positives = 40/64 (62%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYHRSK 321
           MDFDEY+YLE TVENPE  K  D  NGG    +S EK+      H  DD+ +DL+   SK
Sbjct: 1   MDFDEYEYLENTVENPELKKSEDKVNGGHRIAESKEKDRSRSSKHTSDDDGDDLE-RLSK 59

Query: 322 RAKS 333
           R++S
Sbjct: 60  RSRS 63


>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 610

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTAN-GGDETVKSGEKEXXXXXXHRID---DNDEDLDY 309
           MDFDEY+YLEKTVENP     N+  N GGDE VKS  KE      HR D   + DED D 
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58

Query: 310 HRSKRAKS 333
            RSKR++S
Sbjct: 59  RRSKRSRS 66


>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 599

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTAN-GGDETVKSGEKEXXXXXXHRID---DNDEDLDY 309
           MDFDEY+YLEKTVENP     N+  N GGDE VKS  KE      HR D   + DED D 
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58

Query: 310 HRSKRAKS 333
            RSKR++S
Sbjct: 59  RRSKRSRS 66


>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
          Length = 560

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTAN-GGDETVKSGEKEXXXXXXHRID---DNDEDLDY 309
           MDFDEY+YLEKTVENP     N+  N GGDE VKS  KE      HR D   + DED D 
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58

Query: 310 HRSKRAKS 333
            RSKR++S
Sbjct: 59  RRSKRSRS 66


>ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|20197280|gb|AAC64224.2| putative splicing factor
           [Arabidopsis thaliana] gi|133778824|gb|ABO38752.1|
           At2g16940 [Arabidopsis thaliana]
           gi|330251464|gb|AEC06558.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 561

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTAN-GGDETVKSGEKEXXXXXXHRID---DNDEDLDY 309
           MDFDEY+YLEKTVENP     N+  N GGDE VKS  KE      HR D   + DED D 
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58

Query: 310 HRSKRAKS 333
            RSKR++S
Sbjct: 59  RRSKRSRS 66


>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
           gi|482568547|gb|EOA32736.1| hypothetical protein
           CARUB_v10016041mg [Capsella rubella]
          Length = 550

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 35/64 (54%), Positives = 41/64 (64%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDLDYHRSK 321
           MDFDEY+YLEKTVENP     N+  NGGDE  KS  KE      HR   +DED +  RSK
Sbjct: 1   MDFDEYEYLEKTVENPLLE--NEVVNGGDEKAKSEGKERSRSSRHR---SDEDEEGRRSK 55

Query: 322 RAKS 333
           R++S
Sbjct: 56  RSRS 59


>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
           lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
           ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTAN-GGDETVKSGEKEXXXXXXHRID---DNDEDLDY 309
           MDFDEY+YLEKTVENP     N+  N GGDE VKS  +E      HR D   + DED D 
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGRERSRSSRHRGDEKKERDEDEDG 58

Query: 310 HRSKRAKS 333
            RSKR++S
Sbjct: 59  RRSKRSRS 66


>ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
           gi|557110532|gb|ESQ50823.1| hypothetical protein
           EUTSA_v10022624mg [Eutrema salsugineum]
          Length = 566

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 36/66 (54%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTAN-GGDETVKSGEKEXXXXXXHRIDD-NDEDLDYHR 315
           MDFDEY+YLEKTVENP     N+  N GGDE  K   KE      HR D+  DED D  R
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKAKPEVKERSRSSRHRSDEKRDEDEDGRR 58

Query: 316 SKRAKS 333
           SKR++S
Sbjct: 59  SKRSRS 64


>ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isoform X5 [Citrus sinensis]
          Length = 639

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDL--DYHR 315
           MDFDEY+YLEK VENPEP K  +TAN GD  VKS ++        + D+  ED   D HR
Sbjct: 1   MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59

Query: 316 SKRAKS 333
           S+ +KS
Sbjct: 60  SRGSKS 65


>ref|XP_006486688.1| PREDICTED: RNA-binding protein 39-like isoform X4 [Citrus sinensis]
          Length = 647

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +1

Query: 142 MDFDEYDYLEKTVENPEPPKLNDTANGGDETVKSGEKEXXXXXXHRIDDNDEDL--DYHR 315
           MDFDEY+YLEK VENPEP K  +TAN GD  VKS ++        + D+  ED   D HR
Sbjct: 1   MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59

Query: 316 SKRAKS 333
           S+ +KS
Sbjct: 60  SRGSKS 65


Top