BLASTX nr result
ID: Paeonia24_contig00018069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00018069
(1360 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22720.3| unnamed protein product [Vitis vinifera] 422 e-115
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s... 407 e-111
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr... 385 e-104
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s... 375 e-101
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s... 374 e-101
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot... 372 e-100
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s... 370 1e-99
emb|CBI26210.3| unnamed protein product [Vitis vinifera] 344 5e-92
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s... 339 1e-90
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor... 338 3e-90
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun... 323 1e-85
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s... 322 2e-85
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s... 322 2e-85
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas... 317 6e-84
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s... 315 3e-83
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp... 314 5e-83
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s... 313 1e-82
gb|EYU39326.1| hypothetical protein MIMGU_mgv1a008161mg [Mimulus... 308 3e-81
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei... 302 2e-79
ref|XP_002872419.1| RNA polymerase III subunit RPC82 family prot... 293 2e-76
>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
Length = 524
Score = 422 bits (1085), Expect = e-115
Identities = 228/426 (53%), Positives = 305/426 (71%), Gaps = 18/426 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLE-SQSDKVE----VQGALRVNFVRLVNAHFL 166
IVSEE KEC+ I+E LL+HGRLTLEQ+L+ ++S++ E VQ ALR +F++LV AHF+
Sbjct: 104 IVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFV 163
Query: 167 EHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEAERL 346
E CPA +P + PPS+EE A K+ +++P TIE+ AI AA P +A+RF V
Sbjct: 164 ERCPASEPFLAPPSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTG 223
Query: 347 YDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDS-KKEVIWRVNFEKLVDRLRHKACIAN 523
D +D+ P VT GEKRKQ+A E+D++ S +K+V+WR NFE+ V LRHKACIAN
Sbjct: 224 TD-----VDDSPNVTAGEKRKQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIAN 278
Query: 524 VRSRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHVRA 676
V++RLD+G IVLSA+LE SE S++TI+E VM++E GR+MTL+ VR
Sbjct: 279 VKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRG 338
Query: 677 SLAELDCD---KTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLL 847
SL +L C + ++ YS+DLKNII+ A+N+EVE++ LKRYGRDAY+IFRLLSKS LL
Sbjct: 339 SLIQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLL 398
Query: 848 ETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLN 1027
ETD+ISD TF++K DT KILY+LWKD YL MEK+ L RQS+ +LWKV K T+W VLN
Sbjct: 399 ETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLN 458
Query: 1028 DTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDAL 1207
+ YH+ALNL R+A E EQ E+ ++P +KRVG + R++R K +LLESSLMK+DDA+
Sbjct: 459 EMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAI 518
Query: 1208 MLFQNF 1225
MLF +F
Sbjct: 519 MLFNDF 524
>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
vinifera]
Length = 511
Score = 407 bits (1045), Expect = e-111
Identities = 220/424 (51%), Positives = 295/424 (69%), Gaps = 16/424 (3%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLE---SQSDKVEVQGALRVNFVRLVNAHFLEH 172
IVSEE KEC+ I+E LL+HGRLTLEQ+L+ S + VQ ALR +F++LV AHF+E
Sbjct: 99 IVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQREPVVQDALRESFLKLVRAHFVER 158
Query: 173 CPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEAERLYD 352
CPA +P + PPS+EE A K+ +++P TIE+ AI AA P +A+RF V D
Sbjct: 159 CPASEPFLAPPSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTD 218
Query: 353 EEENNMDNLPRVTIGEKRKQNAFEMDEDLEDS-KKEVIWRVNFEKLVDRLRHKACIANVR 529
+++ RKQ+A E+D++ S +K+V+WR NFE+ V LRHKACIANV+
Sbjct: 219 VDDS-----------PNRKQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIANVK 267
Query: 530 SRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHVRASL 682
+RLD+G IVLSA+LE SE S++TI+E VM++E GR+MTL+ VR SL
Sbjct: 268 TRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSL 327
Query: 683 AELDCD---KTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLET 853
+L C + ++ YS+DLKNII+ A+N+EVE++ LKRYGRDAY+IFRLLSKS LLET
Sbjct: 328 IQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLET 387
Query: 854 DRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLNDT 1033
D+ISD TF++K DT KILY+LWKD YL MEK+ L RQS+ +LWKV K T+W VLN+
Sbjct: 388 DKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEM 447
Query: 1034 YHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDALML 1213
YH+ALNL R+A E EQ E+ ++P +KRVG + R++R K +LLESSLMK+DDA+ML
Sbjct: 448 YHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIML 507
Query: 1214 FQNF 1225
F +F
Sbjct: 508 FNDF 511
>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC3-like isoform X1 [Citrus
sinensis] gi|557523806|gb|ESR35173.1| hypothetical
protein CICLE_v10004721mg [Citrus clementina]
Length = 527
Score = 385 bits (990), Expect = e-104
Identities = 210/428 (49%), Positives = 291/428 (67%), Gaps = 20/428 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVL------ESQSDKVEVQGALRVNFVRLVNAHF 163
I+S+EF ++C +V+ LL+HGRLTL+Q+ E + + V++ +LR V+LV AH+
Sbjct: 104 ILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLD-SLRETLVKLVTAHY 162
Query: 164 LEHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHV--EA 337
+E CPA +P ++P S+EE A KK +I +P TIE+ + AA+P EA RF V
Sbjct: 163 VERCPASEPLLMPISEEEGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNV 222
Query: 338 ERLYDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACI 517
E E+E N +N VT GEKRK + E+DE ++ V++R NFE + RLRHK CI
Sbjct: 223 ESDVGEKEKNSNN---VTPGEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCI 279
Query: 518 ANVRSRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHV 670
+VR+ LD+G VLSA+L+ +S SL++IYE+V+++E GR MTLDHV
Sbjct: 280 DHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHV 339
Query: 671 RASLA---ELDCDKTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSH 841
RASL EL SD YSID + II+ A+N EVE++V KRYGRDAY+IFRLLSKS
Sbjct: 340 RASLVQLGELSFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGR 399
Query: 842 LLETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERV 1021
LLETD+ISD TF++K D PKILYKLWKDGYL MEK+V+ RQS+ +LWKVN++ +W+ V
Sbjct: 400 LLETDKISDTTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHV 459
Query: 1022 LNDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDD 1201
L++ +HAALNL R++ E ++ EL +P+DKR G +++RY R K +LLESS MK+DD
Sbjct: 460 LDEMFHAALNLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDD 519
Query: 1202 ALMLFQNF 1225
A++LF +F
Sbjct: 520 AILLFHDF 527
>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
X2 [Citrus sinensis]
Length = 512
Score = 375 bits (963), Expect = e-101
Identities = 205/425 (48%), Positives = 287/425 (67%), Gaps = 17/425 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVL------ESQSDKVEVQGALRVNFVRLVNAHF 163
I+S+EF ++C +V+ LL+HGRLTL+Q+ E + + V++ +LR V+LV AH+
Sbjct: 104 ILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGNLVDLD-SLRETLVKLVTAHY 162
Query: 164 LEHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHV--EA 337
+E CPA +P ++P S+EE A KK +I +P TIE+ + AA+P EA RF V
Sbjct: 163 VERCPASEPLLMPISEEEGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNV 222
Query: 338 ERLYDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACI 517
E E+E N +N VT GEKRK + E+DE ++ V++R NFE + RLRHK CI
Sbjct: 223 ESDVGEKEKNSNN---VTPGEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCI 279
Query: 518 ANVRSRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHV 670
+VR+ LD+G VLSA+L+ +S SL++IYE+V+++E GR MTLDHV
Sbjct: 280 DHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHV 339
Query: 671 RASLAELDCDKTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLE 850
RASL +LD +K II+ A+N EVE++V KRYGRDAY+IFRLLSKS LLE
Sbjct: 340 RASLVQLDFEK------------IIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLE 387
Query: 851 TDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLND 1030
TD+ISD TF++K D PKILYKLWKDGYL MEK+V+ RQS+ +LWKVN++ +W+ VL++
Sbjct: 388 TDKISDTTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDE 447
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDALM 1210
+HAALNL R++ E ++ EL +P+DKR G +++RY R K +LLESS MK+DDA++
Sbjct: 448 MFHAALNLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAIL 507
Query: 1211 LFQNF 1225
LF +F
Sbjct: 508 LFHDF 512
>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
tuberosum]
Length = 525
Score = 374 bits (959), Expect = e-101
Identities = 211/426 (49%), Positives = 288/426 (67%), Gaps = 18/426 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQG-----ALRVNFVRLVNAHFL 166
IVSEE GKEC+ I E LL+HGRLTL +++E + + QG A R +F LVNA F+
Sbjct: 104 IVSEEMGKECEEIFEGLLQHGRLTLTEIIERYKEASK-QGDSSADAARDSFNSLVNARFV 162
Query: 167 EHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEAERL 346
E CPA P + PP+ EE +A KKR AK +I + T+E+ A+ AA P E+ RF VE +
Sbjct: 163 ERCPAPDPLLEPPAAEETAA-KKRGAKSAKI-QAQTMEQQALAAAAPMESMRFLVE-DIW 219
Query: 347 YDEEENNMDNLPRVTIGEKRKQNAFEMD-EDLEDSKKEVIWRVNFEKLVDRLRHKACIAN 523
D E V G KRKQ E + +D KKEV+WR NFE+ + RLRHKAC+AN
Sbjct: 220 NDSVERADKRTTDVKCGMKRKQGDLESNTKDSATGKKEVLWRANFEEFIRRLRHKACVAN 279
Query: 524 VRSRLDEGTVIVLSAVLETNT-SETNF--------SLNTIYEKVMQNERGRTMTLDHVRA 676
V+ R++ +VL+A LE + SET S+N IY++V++ E G M L+ +RA
Sbjct: 280 VKVRVNNDAAVVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRA 339
Query: 677 SLAELDCDKT--ESDE-YSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLL 847
SL +L C+ E DE YS+DLKNII+QAR EVE++VLKRYGR+AY++FRLLSK+ L+
Sbjct: 340 SLDDLGCEAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLV 399
Query: 848 ETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLN 1027
ETD+ISD TF++K D KIL+KLWKD YL M+K++ A +QSE +LWK+NK+++WE +L+
Sbjct: 400 ETDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILD 459
Query: 1028 DTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDAL 1207
+ YHAALNL R+ E+EQ E+ ++P DK VGE+ +Y R K ++LESSLM +DD+L
Sbjct: 460 EMYHAALNLRLRITHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSL 519
Query: 1208 MLFQNF 1225
MLF +F
Sbjct: 520 MLFHDF 525
>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
[Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
polymerase III subunit RPC82 family protein, putative
isoform 1 [Theobroma cacao]
Length = 523
Score = 372 bits (956), Expect = e-100
Identities = 212/432 (49%), Positives = 293/432 (67%), Gaps = 24/432 (5%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQV------LESQSDKVEVQGALRVNFVRLVNAHF 163
IVS++ K+C ++E LL HGRLTL+Q+ +++ D V + A+R F++L+NAHF
Sbjct: 104 IVSQKLDKQCVELIEALLLHGRLTLKQMSDRAKSAQNEGDDV-ILDAVREAFIKLLNAHF 162
Query: 164 LEHCPAGKPSVVPPSKEEASAGKKRVAKFTRI-DKPMTIEELAITAAIPEEAERF----H 328
+E CPA +P + P++EE SA +KRV K +I + T+E+ + AA P EA RF
Sbjct: 163 VERCPAAEPVLTKPTEEETSA-RKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTR 221
Query: 329 VEAERLYDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVI-WRVNFEKLVDRLRH 505
E ++ENN ++ T+G+KRK +A E + + E + ++V+ WR NFE+ + RLRH
Sbjct: 222 TEPAADGGKDENNSSSM---TVGKKRKLDALESETEGEATDEQVVLWRANFEEFIRRLRH 278
Query: 506 KACIANVRSRLDEGTVIVLSAVLE-TNTSETN--------FSLNTIYEKVMQNERGRTMT 658
KA I NVR+ LD+G VIV+SA+LE T T+E SLN+IYE+V+++E GR +T
Sbjct: 279 KAFIENVRACLDDGAVIVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNIT 338
Query: 659 LDHVRASLAELDCD---KTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLS 829
D VRASL +L C K ++ YSID K II+ A+N+EVE++VLKRYGRDAY++FRLLS
Sbjct: 339 FDRVRASLVQLSCPPFVKAVNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLS 398
Query: 830 KSSHLLETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTV 1009
++ LLETD+I+D F++K DT KILYKLWKD YLHMEK+ L RQS+ +LWKVNK T+
Sbjct: 399 STARLLETDKIADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTL 458
Query: 1010 WERVLNDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLM 1189
WE VL++ +HAALNL R+A E EQ EL +P DKRV R K +LLESS M
Sbjct: 459 WEHVLDEMFHAALNLSLRVAHELEQEKELLNLPQDKRV-------NRLRKVRLLLESSQM 511
Query: 1190 KIDDALMLFQNF 1225
K+DDA+MLF +F
Sbjct: 512 KLDDAIMLFHDF 523
>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
lycopersicum]
Length = 525
Score = 370 bits (949), Expect = 1e-99
Identities = 209/427 (48%), Positives = 290/427 (67%), Gaps = 19/427 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQG-----ALRVNFVRLVNAHFL 166
IVSEE GKEC+ I+E LL+HGRL+L Q++ + QG A + +F RLVNA F+
Sbjct: 104 IVSEELGKECEEILEWLLQHGRLSLSQIIVKYK-QASKQGDSSADAAQDSFNRLVNARFV 162
Query: 167 EHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEAERL 346
E CPA P + PP++EE +A KKR AK +I + T+E+ A+ AA P E+ RF VE +
Sbjct: 163 ERCPAPDPLLEPPAEEETAA-KKRGAKSAKI-QAQTMEQQALAAAAPMESMRFLVE--NI 218
Query: 347 YDEEENNMDNLPR-VTIGEKRKQNAFEMD-EDLEDSKKEVIWRVNFEKLVDRLRHKACIA 520
+++ D V G KRKQ E + +D +KEV+WR NFE+ + RLRHKAC+A
Sbjct: 219 WNDSVEKADKRTTDVKCGMKRKQEDLESNTKDPATGEKEVLWRANFEEFIRRLRHKACVA 278
Query: 521 NVRSRLDEGTVIVLSAVLETNT-SETNF--------SLNTIYEKVMQNERGRTMTLDHVR 673
NV+ R++ IVL+A LE + SET S+N IY++V++ E G M L+ +R
Sbjct: 279 NVKVRVNNDAAIVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIR 338
Query: 674 ASLAELDCDKT--ESDE-YSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHL 844
ASL +L C+ E DE YS+DLKNII+QAR EVE++VLKRYGR+AY++FRLLSK+ L
Sbjct: 339 ASLDDLGCEAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRL 398
Query: 845 LETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVL 1024
+ETD+ISD TF++K D KIL+KLWKD YL M+K++ A +QSE +LWK+NK+++WE +L
Sbjct: 399 VETDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHIL 458
Query: 1025 NDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDA 1204
++ YHAALNL R E+EQ E+ ++P DK VGE+ +Y R K ++LESSLM +DD+
Sbjct: 459 DEMYHAALNLRLRTTHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDS 518
Query: 1205 LMLFQNF 1225
LMLF +F
Sbjct: 519 LMLFHDF 525
>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 344 bits (883), Expect = 5e-92
Identities = 205/427 (48%), Positives = 274/427 (64%), Gaps = 19/427 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLE-----SQSDKVEVQGALRVNFVRLVNAHFL 166
IVS+E KEC+ + E LKHG LTL+Q+L+ VQ ALR +F +LVNAH++
Sbjct: 104 IVSKELDKECEELFEAFLKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYV 163
Query: 167 EHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEAERL 346
E CPA P +VPP +E+ A K +++ E+ I A P +A+ F V +
Sbjct: 164 ERCPAPDPFLVPPDEEKTPARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTC 223
Query: 347 YD-EEENNMDNLPRVTIGEKRKQNAFEMD-EDLEDSKKEVIWRVNFEKLVDRLRHKACIA 520
D + ++ N P V IG+KRKQ+A ++D E S+K+V WR N+++LV LRHKACI
Sbjct: 224 GDINGDKSIGNPPGVVIGKKRKQDALKLDTESGAASEKDVPWRANYKELVCHLRHKACIE 283
Query: 521 NVRSRLDEGTVIVLSAVLE-TNTSETN--------FSLNTIYEKVMQNERGRTMTLDHVR 673
NVR+RLD G IVLSA+LE T ++E N S++TI E VMQ+E G +MTL+ +R
Sbjct: 284 NVRARLDSGAAIVLSAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIR 343
Query: 674 ASLAELDCDKT---ESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHL 844
ASL +L C Y+IDLK II+ A+N+EVE++VLKRYGR+A++IFRLLSKS
Sbjct: 344 ASLVQLGCHPNGVGADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCP 403
Query: 845 LETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVL 1024
LET +ISD TF++K + KILYKLWKD LHMEKIVL RQS+ +LWKV K T W +L
Sbjct: 404 LETTKISDTTFIEKKEAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHIL 463
Query: 1025 NDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDA 1204
++ YHAALNL ++ EL R DK VG + ER R +LL++SLMK+DDA
Sbjct: 464 DEMYHAALNLSIQII-------ELRR---DKHVGALRERDVR---LAILLQASLMKLDDA 510
Query: 1205 LMLFQNF 1225
LMLF +F
Sbjct: 511 LMLFHDF 517
>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
[Fragaria vesca subsp. vesca]
Length = 534
Score = 339 bits (870), Expect = 1e-90
Identities = 190/439 (43%), Positives = 285/439 (64%), Gaps = 31/439 (7%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLE-----SQSDKVEVQ--GALRVNFVRLVNAH 160
+V++E G EC+ +V LL+HGRLT +Q+++ S+SD EVQ A + NFVRLVNA
Sbjct: 99 VVAQELGDECKQLVAGLLEHGRLTQQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNAR 158
Query: 161 FLEHCPAGKPSVV-PPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEA 337
F+E CPA +P + PP +E + + AK ++ P TIE+ + AA P EA RF +
Sbjct: 159 FVERCPAPEPLLEEPPEQEGPKKPRGKSAKMVQV--PETIEQRVLAAARPMEAIRFLITT 216
Query: 338 ERLYDEE-ENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKAC 514
E D+ + + +N + +GEKRK + + +E + K ++WR NFE+ + LRHKAC
Sbjct: 217 ESETDDPLQKSENNFSSMGVGEKRKFDDLDSEEHGSNDKGVILWRANFEQFIRCLRHKAC 276
Query: 515 IANVRSRLDEGTVIVLSAVLETNTSE-----TNFS----LNTIYEKVMQNERGRTMTLDH 667
I +VR+R D+G +VL AVL+ ++ T++S ++ IYE+VM +E ++ +
Sbjct: 277 IESVRARHDDGAAVVLRAVLKATRNQETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQEC 336
Query: 668 VRASLAELDC----------DKTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIF 817
VRA L L C D+ E YS+DLK II+ +N+EVE++VLKRYG+DAY+IF
Sbjct: 337 VRAHLRLL-CGAPLVTGEYEDENEDVLYSVDLKKIIELLQNDEVESIVLKRYGKDAYRIF 395
Query: 818 RLLSKSSH---LLETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLW 988
RLL+ S+ ETD+IS++ +DK +TPKILYKLWKD Y+HMEK+ L A +QS++++W
Sbjct: 396 RLLTSQSNAGRFFETDKISEMALVDKKETPKILYKLWKDDYVHMEKLSLTAAKQSQVMVW 455
Query: 989 KVNKKTVWERVLNDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMV 1168
KV+K VWE VL++ YHAA NL++R E E+ E++ P +KR+GE+E++ R+
Sbjct: 456 KVHKSIVWEHVLDEMYHAAYNLVKRYDHEREENKEVTNTPKEKRIGELEKKANRFLAVRK 515
Query: 1169 LLESSLMKIDDALMLFQNF 1225
++ SSL+K+DDALMLF +F
Sbjct: 516 IMASSLLKLDDALMLFHDF 534
>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
Length = 564
Score = 338 bits (867), Expect = 3e-90
Identities = 200/466 (42%), Positives = 280/466 (60%), Gaps = 58/466 (12%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQGALRVNFVRLVNAHFLEHCPA 181
IVSEE K C I+E LL+HGRLTLEQ+ E D VQ A+R +F +L+N+ F+E CPA
Sbjct: 103 IVSEELDKNCGEILEGLLQHGRLTLEQIYERARDNA-VQDAVRESFQKLLNSRFVERCPA 161
Query: 182 GKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPE-EAERFHV--EAERLYD 352
+P V P + + ++ KR AK ++D+ EE + AA + RF + + +D
Sbjct: 162 PEPFVEPSTIKSSN---KRGAKSAKLDEVSETEEQRVLAAAASLDTLRFSILTPSGTEFD 218
Query: 353 EEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVI-WRVNFEKLVDRLRHKACIANVR 529
E++ + D+ + +GEKRK A + D+ ++ EVI WR NFE+ LRHKACI NVR
Sbjct: 219 EDKKDGDSSSSMGVGEKRKHGAADSDDAFGSNENEVILWRANFEEFTRYLRHKACIENVR 278
Query: 530 SRLDEGTVIVLSAVLETNTS---------ETNFSLNTIYEKVMQNERGRTMTLDHVRASL 682
+RLD G VL A+L+ S + S++TI+E+VM++E GR++TLD VRASL
Sbjct: 279 ARLDVGAATVLKAMLDATRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASL 338
Query: 683 AELDCDKTESDE-YSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLETDR 859
+L C + +D+ YSIDLK II+ A+ EVE++VL+RYGRDAY++FRLLSK+ L ETD+
Sbjct: 339 VQLGCSSSGTDDTYSIDLKQIIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDK 398
Query: 860 ISDITFMDKMDTPKILYKLWKDGYLHME-------------------------KIVLPAL 964
I+D+TF++K + PKIL KLWKD YLHME ++ L +
Sbjct: 399 IADMTFVEKKEAPKILGKLWKDEYLHMEVEYFNLLIKFTLSSNMAICDVVDKPRLTLSGM 458
Query: 965 -------------------RQSELVLWKVNKKTVWERVLNDTYHAALNLIQRMASEEEQG 1087
R + LWKVNK +W+ VL++ YHAALNL R+ E +Q
Sbjct: 459 SDLVLMDQNKEIVNKFVVDRNTTFYLWKVNKPILWQHVLDEMYHAALNLSLRVIHELDQK 518
Query: 1088 GELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDALMLFQNF 1225
EL IP +KR G +E+ +KR LESSLMK+DDALMLF++F
Sbjct: 519 KELLTIPPEKRTGPLEKEFKRLKNAKFFLESSLMKLDDALMLFRHF 564
>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
gi|462415465|gb|EMJ20202.1| hypothetical protein
PRUPE_ppa004195mg [Prunus persica]
Length = 524
Score = 323 bits (827), Expect = 1e-85
Identities = 177/432 (40%), Positives = 283/432 (65%), Gaps = 24/432 (5%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLE------SQSDKVEVQGALRVNFVRLVNAHF 163
+VS+E + + I++ LL++GRLTL+Q++E SQ D + + +++ +F++LVNAHF
Sbjct: 100 VVSQELDTDRELILKDLLENGRLTLKQIIEGAESSKSQGDSAD-KDSVQESFLKLVNAHF 158
Query: 164 LEHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIPEEAERFHVEAER 343
+E CPA +P + +K+E A K+ ++ P TIE+ I AA P EA RF + +
Sbjct: 159 VERCPAPEPVLGQATKQEGPAKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDS 218
Query: 344 LYDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIAN 523
D DN+ ++GEK + + + V+WR NFE+ + LRHKAC+ N
Sbjct: 219 EADAPGGKSDNM---SVGEKVGIGI--VISIYQGYDEVVLWRANFEEFIRCLRHKACVEN 273
Query: 524 VRSRLDEGTVIVLSAVLE-TNTSETN--------FSLNTIYEKVMQNERGRTMTLDHVRA 676
VR+RLD+ +VL A+L+ T T+E SLNTIYE+V+ +E GR++T+ VR
Sbjct: 274 VRARLDDEAAVVLRAMLKATRTAEKKVKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRD 333
Query: 677 SLAELDCDKT------ESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSS 838
SL+ L CD + E + YS DLK I++ A+++EVE +VLKRYG+DAY +FR+LS +
Sbjct: 334 SLSGL-CDSSQERDVDEDESYSADLKKILELAQDDEVELIVLKRYGKDAYTMFRILSLAG 392
Query: 839 HLLETDRISD---ITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTV 1009
+ETD+ISD ++ ++K +TPKILY LWKD YLHME++V+ RQS+ ++W+V+K +
Sbjct: 393 RPIETDKISDMSQLSLVEKNETPKILYNLWKDDYLHMERLVVTGARQSQFLVWRVDKPII 452
Query: 1010 WERVLNDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLM 1189
W+ VL++ +H ALNL R+A EEE+ E++ +P+ K +GE+ ++++ + +++L++SL+
Sbjct: 453 WKHVLDEMFHTALNLSLRLACEEERFKEITDLPAHKLLGEMAKQWQLYRNVILVLQASLL 512
Query: 1190 KIDDALMLFQNF 1225
K+DDALMLF +F
Sbjct: 513 KLDDALMLFHDF 524
>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
sativus]
Length = 518
Score = 322 bits (826), Expect = 2e-85
Identities = 182/425 (42%), Positives = 269/425 (63%), Gaps = 17/425 (4%)
Frame = +2
Query: 2 IVSEEFG--KECQAIVEHLLKHGRLTLEQVLE-SQSDKVEVQGALRVNFVRLVNAHFLEH 172
I S++ G K CQ ++E LL++GRL++EQ++E ++S + + + +L+NAHF+E
Sbjct: 100 IASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESRNHPISDVVHDSLFKLLNAHFVER 159
Query: 173 CPAGKPSVVPPSKEEASAGKKRVAKFTRIDK-PMTIEELAITAAIPEEAERFHVEAERLY 349
CPA +P++ P K E +KR AK +I + P T+E+ I AA P E RF +
Sbjct: 160 CPAPEPTLSP--KVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPE 217
Query: 350 DEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIANVR 529
E+ + + G+KRK + E+ +D D+ ++WR N+++ + LRHKACI +VR
Sbjct: 218 AEKSEHHSQIS----GQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVR 273
Query: 530 SRLDEGTVIVLSAVLETNTSETNF---------SLNTIYEKVMQNERGRTMTLDHVRASL 682
S+ D+G V VLSA+LE S SL+ IYE+VM+NE GR+MTLD V ASL
Sbjct: 274 SQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL 333
Query: 683 AELDCDKTESDEYS----IDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLE 850
A L C + + S +D II+QA+ +EVE++VLKRYGRDAY++FR LSK+ L+E
Sbjct: 334 AALGCPGIDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVE 393
Query: 851 TDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLND 1030
T++ISD +F+DK + PKILY+LWKD YL+MEK+ L R S +LW+V++ +WE VL++
Sbjct: 394 TEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDE 453
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDALM 1210
YHA+LNL R+A E E+ EL +P D + ++ + LL SSL+K+DDALM
Sbjct: 454 MYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALM 513
Query: 1211 LFQNF 1225
LF +F
Sbjct: 514 LFHDF 518
>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
sativus]
Length = 518
Score = 322 bits (826), Expect = 2e-85
Identities = 182/425 (42%), Positives = 269/425 (63%), Gaps = 17/425 (4%)
Frame = +2
Query: 2 IVSEEFG--KECQAIVEHLLKHGRLTLEQVLE-SQSDKVEVQGALRVNFVRLVNAHFLEH 172
I S++ G K CQ ++E LL++GRL++EQ++E ++S + + + +L+NAHF+E
Sbjct: 100 IASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESRNHPISDVVHDSLFKLLNAHFVER 159
Query: 173 CPAGKPSVVPPSKEEASAGKKRVAKFTRIDK-PMTIEELAITAAIPEEAERFHVEAERLY 349
CPA +P++ P K E +KR AK +I + P T+E+ I AA P E RF +
Sbjct: 160 CPAPEPTLSP--KVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPE 217
Query: 350 DEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIANVR 529
E+ + + G+KRK + E+ +D D+ ++WR N+++ + LRHKACI +VR
Sbjct: 218 AEKSEHHSQIS----GQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVR 273
Query: 530 SRLDEGTVIVLSAVLETNTSETNF---------SLNTIYEKVMQNERGRTMTLDHVRASL 682
S+ D+G V VLSA+LE S SL+ IYE+VM+NE GR+MTLD V ASL
Sbjct: 274 SQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL 333
Query: 683 AELDCDKTESDEYS----IDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLE 850
A L C + + S +D II+QA+ +EVE++VLKRYGRDAY++FR LSK+ L+E
Sbjct: 334 AALGCPGMDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVE 393
Query: 851 TDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLND 1030
T++ISD +F+DK + PKILY+LWKD YL+MEK+ L R S +LW+V++ +WE VL++
Sbjct: 394 TEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDE 453
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDALM 1210
YHA+LNL R+A E E+ EL +P D + ++ + LL SSL+K+DDALM
Sbjct: 454 MYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALM 513
Query: 1211 LFQNF 1225
LF +F
Sbjct: 514 LFHDF 518
>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
gi|561016615|gb|ESW15419.1| hypothetical protein
PHAVU_007G071300g [Phaseolus vulgaris]
Length = 517
Score = 317 bits (813), Expect = 6e-84
Identities = 186/427 (43%), Positives = 270/427 (63%), Gaps = 20/427 (4%)
Frame = +2
Query: 5 VSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQGALRVNFVR-----LVNAHFLE 169
VS + +EC +++ LL+ GRLTL+Q+++ S E A+ VR L+ A +E
Sbjct: 107 VSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKE--NAVDTKVVREILSKLLTARLVE 164
Query: 170 HCPAGKPSVVPPSKEEASAGKKRVAKFTRI-DKPMTIEELAITAAIPEEAERFHVEAERL 346
CPA +P V KE + +KR AK +I + P T+E+ + AA+P A RF A+
Sbjct: 165 RCPAPEPVVSTSFKETTT--RKRGAKSAKIFEAPETLEQRVLEAAVPGNAIRFSFTADM- 221
Query: 347 YDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKE-VIWRVNFEKLVDRLRHKACIAN 523
+N+D GE + + D+K+E ++WR NFE+ + +RHKA I N
Sbjct: 222 ----RSNVD-------GETNSDDDQITSVEQNDAKEEEILWRANFEEFIRHIRHKALIEN 270
Query: 524 VRSRLDEGTVIVLSAVLE-TNTSETN--------FSLNTIYEKVMQNERGRTMTLDHVRA 676
+R++ D+GT VLSAVLE T T E SL+TI +VM+ + GRTMT+D +RA
Sbjct: 271 IRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRA 330
Query: 677 SLAELDCDKTE--SDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLE 850
SL++L C + D YSIDLK II++A+N EVE++VLKRYGRDAY++FRLLSK +
Sbjct: 331 SLSQLGCSQRMIVDDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHD 390
Query: 851 TDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLND 1030
TD+I+ T ++K + PK+LY+LWKD YL+MEK++ ++Q+ +++WKVNK VWE VL++
Sbjct: 391 TDQIAASTLVEKKEAPKLLYRLWKDNYLYMEKVIATGVKQTTILMWKVNKPLVWEHVLDE 450
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSD--KRVGEVEERYKRWGKTMVLLESSLMKIDDA 1204
YHAALNL RMA E+E+ EL +P D K G ++++YKR +LL SSLMK+D+A
Sbjct: 451 MYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDEA 510
Query: 1205 LMLFQNF 1225
LMLF +F
Sbjct: 511 LMLFHDF 517
>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
max]
Length = 518
Score = 315 bits (807), Expect = 3e-83
Identities = 180/427 (42%), Positives = 266/427 (62%), Gaps = 19/427 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVE---VQGALRVNFVRLVNAHFLEH 172
IVS + +EC +++ LL+ GRLTL+Q+++ +S + E +R +L+ A F+E
Sbjct: 106 IVSRKLDEECVKLLDGLLRDGRLTLKQMVDRESQRKENAVPTKVVRETLCKLLTARFVER 165
Query: 173 CPAGKPSVVPPSKEEASAGKKRVAKFTRI-DKPMTIEELAITAAIPEEAERFHVEAE-RL 346
CPA +P V KE + +KR AK +I + P T+E+ + AA+P + RF + A+ R
Sbjct: 166 CPAPEPVVSTSFKETTT--RKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLAADTRC 223
Query: 347 YDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIANV 526
+ E N D+ +++ E+ + +++WR NFE+ + LRHK I NV
Sbjct: 224 SVDRETNSDDAQMISVEEEVAKEG------------QILWRANFEEFIRHLRHKVLIENV 271
Query: 527 RSRLDEGTVIVLSAVLETNTS---------ETNFSLNTIYEKVMQNERGRTMTLDHVRAS 679
R++ D+GT VLSAVLE S SL+TI +VM+ + GRTMT+D +RAS
Sbjct: 272 RTQHDDGTATVLSAVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRAS 331
Query: 680 LAELDCDKTE--SDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLET 853
L +L C + + YSIDLK II+ ARN EVE++VLKRYG D Y+IFRLL+K +T
Sbjct: 332 LVQLGCSPSMILEESYSIDLKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDT 391
Query: 854 DRISDITFMDKMDTPKILYKLWKDGYLHMEKI-VLPALRQSELVLWKVNKKTVWERVLND 1030
D+I+ T ++K + K+LYKLWKD YL+MEK+ +Q+ +++WKVNK +WE VL++
Sbjct: 392 DQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATVGAKQTTILMWKVNKPLLWEYVLDE 451
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSDKR--VGEVEERYKRWGKTMVLLESSLMKIDDA 1204
YHAALNL RMA E+E+ EL ++P DKR G ++++YK+ +LL SSLMK+DDA
Sbjct: 452 MYHAALNLSLRMAFEQEKDEELLKVPKDKRQGPGPLQKKYKKLLNVWLLLGSSLMKLDDA 511
Query: 1205 LMLFQNF 1225
LMLF +F
Sbjct: 512 LMLFHDF 518
>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative [Ricinus
communis] gi|223549895|gb|EEF51382.1| DNA-directed RNA
polymerase III 62 kDa polypeptide, putative [Ricinus
communis]
Length = 485
Score = 314 bits (805), Expect = 5e-83
Identities = 171/380 (45%), Positives = 255/380 (67%), Gaps = 16/380 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQ-GALRVNFVRLVNAHFLEHCP 178
I+S++F K C IVE LL+HGRLT++Q+++ + + + +++ N +LVN ++EHCP
Sbjct: 99 IISQDFHKSCVDIVEGLLEHGRLTVKQIVDRANSRNSIGLDSVKENLCKLVNGRYIEHCP 158
Query: 179 AGKPSVVPPSKEEASAGKKRVAKFTRID-KPMTIEELAITAAIPEEAERFHVEAE-RLYD 352
A +P + PP++EE A KKR AK +I + T+E+ + A+P +A+RF V+ + L D
Sbjct: 159 ASEPVLAPPTEEEDRA-KKRSAKSAKIVIESETLEQRVLAVAVPMDAKRFSVDLDTELKD 217
Query: 353 EEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIANVRS 532
+ EN+ + +G+K ++ + V+WR NFE+ + RLRHKACI NVR
Sbjct: 218 DAENDQNKSSDKHVGDKVAED------------QVVLWRANFEEFIRRLRHKACIENVRG 265
Query: 533 RLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHVRASLA 685
RLD+G IVLSA+L+ + +E SLN+IYE+V++NE GR MT+DH+ ++L
Sbjct: 266 RLDDGAAIVLSAMLDASRTEEKKVKTASSVPLSLNSIYEEVIKNENGRNMTIDHIESALG 325
Query: 686 ELDCD----KTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLET 853
+L K D Y+ID K+II+ A+++EVE++VLKRYGRDAY+IFRLLSK+S LLET
Sbjct: 326 QLGSPPPFVKAVEDLYTIDFKHIIEAAQSDEVESIVLKRYGRDAYRIFRLLSKASRLLET 385
Query: 854 DRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLNDT 1033
D+ISD F++K +T KILYK+W+D YL MEK+V + +LWKVNK T+W++VL++
Sbjct: 386 DKISDTIFVEKKETTKILYKMWQDDYLLMEKLVAGT---ATFLLWKVNKHTLWKQVLDEM 442
Query: 1034 YHAALNLIQRMASEEEQGGE 1093
+HA+LNL R+A E EQ E
Sbjct: 443 FHASLNLSIRVAYELEQQKE 462
>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
max]
Length = 518
Score = 313 bits (802), Expect = 1e-82
Identities = 181/427 (42%), Positives = 268/427 (62%), Gaps = 19/427 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVE---VQGALRVNFVRLVNAHFLEH 172
IVS + +EC ++ LL+ GRLTL+Q+++ +S E +R +L+ A F+E
Sbjct: 106 IVSRKLDEECVKLLVGLLRDGRLTLKQMVDRESQGKENAVPTKVVRETLCKLLTARFVER 165
Query: 173 CPAGKPSVVPPSKEEASAGKKRVAKFTRI-DKPMTIEELAITAAIPEEAERFHVEAERLY 349
CPA +P V KE + KKR AK +I + P T+E+ + AA+P + RF + A
Sbjct: 166 CPAPEPVVSTSFKETTT--KKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLTANMGS 223
Query: 350 D-EEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIANV 526
+ + E N D++P +++ +ED+ +++++WR NFE+ + LRHK I NV
Sbjct: 224 NVDRETNSDDVPMISV-----------EEDVA-KEEQILWRANFEEFIRHLRHKVLIENV 271
Query: 527 RSRLDEGTVIVLSAVLETNTS---------ETNFSLNTIYEKVMQNERGRTMTLDHVRAS 679
R++ D+GT VLSAVLE S SL+TI +VM+ + GRTMT+D +RAS
Sbjct: 272 RTQHDDGTATVLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRAS 331
Query: 680 LAELDCDKTE--SDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLET 853
L +L C + + Y IDLK II+ ARN EVE++VLKRYGRDAY++FRLL+K +T
Sbjct: 332 LVQLGCSPSMILEESYCIDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDT 391
Query: 854 DRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPA-LRQSELVLWKVNKKTVWERVLND 1030
D+I+ T ++K + K+LYKLWKD YL+MEK+ A +Q +++WKVNK +WE VL++
Sbjct: 392 DQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYVLDE 451
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSDK--RVGEVEERYKRWGKTMVLLESSLMKIDDA 1204
YHAALNL RMA E+E+ EL ++P DK G ++++YKR +L+ SSL+K+DDA
Sbjct: 452 MYHAALNLSLRMAFEQEKDEELLKVPKDKLREPGPLQKKYKRLLNVRLLMGSSLLKLDDA 511
Query: 1205 LMLFQNF 1225
LMLF +F
Sbjct: 512 LMLFHDF 518
>gb|EYU39326.1| hypothetical protein MIMGU_mgv1a008161mg [Mimulus guttatus]
Length = 383
Score = 308 bits (790), Expect = 3e-81
Identities = 169/378 (44%), Positives = 248/378 (65%), Gaps = 12/378 (3%)
Frame = +2
Query: 128 RVNFVRLVNAHFLEHCPAGKPSVVPPSKEEASAGKKRVAKFTRIDKPMTIEELAITAAIP 307
R +F +LVNA F+EHCPA P + PP +E KK T++++P +++ + AA P
Sbjct: 17 RESFTKLVNARFVEHCPAPDPHLEPPVVDEKGKKKK-----TQVEEP-PLDQRVLAAAAP 70
Query: 308 EEAERFHVEAERLYDEEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKL 487
E+ RF +E + + EE+ N + V G+KRKQ+ E+D D KKEV+WRVN E+
Sbjct: 71 MESMRFFLEMDD-HSEEKGN-ETTTSVRSGQKRKQDEGELDAD---KKKEVLWRVNVEEF 125
Query: 488 VDRLRHKACIANVRSRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNE 640
+ RLRHKACIA+V+S+++E IVLSA+LE + + S+N IY++V++ E
Sbjct: 126 LRRLRHKACIAHVKSKINEEAAIVLSAMLELSKQSESGLKAEKSEYLSINAIYDEVIKKE 185
Query: 641 RGRTMTLDHVRASLAELDCD--KTESDE-YSIDLKNIIDQARNNEVETLVLKRYGRDAYK 811
G M + VR+ L +L C+ T DE Y ID+K II+ ++N EVE+LV++RYG +AY+
Sbjct: 186 GGLGMDFERVRSLLDQLGCETLSTGMDESYCIDIKEIIELSQNEEVESLVMRRYGPEAYR 245
Query: 812 IFRLLSKSSHLLETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWK 991
I+RLLSK+ L+ET++ISD TF++K T ILYKLWKD +L ME + +QS+ LW
Sbjct: 246 IYRLLSKAGRLMETEKISDSTFVEKKATIAILYKLWKDDFLQMEHVKTSTAKQSDFRLWT 305
Query: 992 VNKKTVWERVLNDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVL 1171
+NK+ + ++VLN+ YHAALNL R+A E++Q E+ ++P DK VGE +Y RW +
Sbjct: 306 INKEQLQKQVLNEMYHAALNLKLRIAHEKDQAKEVIKLPKDKLVGESNTKYVRWANVTRI 365
Query: 1172 LESSLMKIDDALMLFQNF 1225
LES LM +DDA+MLF +F
Sbjct: 366 LESCLMDLDDAIMLFHHF 383
>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
RPC82 family protein [Populus trichocarpa]
Length = 520
Score = 302 bits (774), Expect = 2e-79
Identities = 177/425 (41%), Positives = 265/425 (62%), Gaps = 17/425 (4%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQG--ALRVNFVRLVNAHFLEHC 175
IVS+EF K C ++E LL+HGRL+ EQ+ + D+ G AL+ N +LV A ++E C
Sbjct: 104 IVSQEFDKLCVDLIETLLQHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVMARYVERC 163
Query: 176 PAGKPSVVPPSKEEASAGKKRVAKFTRID-KPMTIEELAITAAIPEEAERFHVEAERLYD 352
P +P + PS+EEA+ ++R AK + +P T+E+ + AA+P E RF E
Sbjct: 164 PISEPFLALPSEEEAAPVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSFELNPEIG 223
Query: 353 EEENNMDNLPRVTIGEKRKQNAFEMDEDLEDSKKEV-IWRVNFEKLVDRLRHKACIANVR 529
+ + ++N IG+KRK +A E D D + K+V +WRVNFE+ + RLRHK CI VR
Sbjct: 224 ADRDKVENNSSSNIGDKRKLDALESDIDGGVADKQVALWRVNFEEFIRRLRHKICIETVR 283
Query: 530 SRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHVRASL 682
+RLD+ V +A+L+ + SE S N+IY +V+++E+GR MTLD+V + L
Sbjct: 284 TRLDDEAATVFTAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVL 343
Query: 683 AELDCD----KTESDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKSSHLLE 850
L + + YSID K+ I+ A+ +E ++V K+YG+DAY++FRLLSK+ LLE
Sbjct: 344 VGLSSSPPFVRVVDNSYSIDFKHTIEVAQTDE--SIVYKKYGKDAYRMFRLLSKAGCLLE 401
Query: 851 TDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWERVLND 1030
TD+ISD F++K +T IL K+W+ YL MEK++ ++ +LWKVN + ERVL+D
Sbjct: 402 TDKISDSIFLEKKETANILSKMWQGDYLQMEKLI---AGPTQFLLWKVNMINLRERVLDD 458
Query: 1031 TYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKIDDALM 1210
+HAALNL R+A E EQ E+ + D G ++E+Y++ K LLESS MK+DDA+M
Sbjct: 459 MFHAALNLSLRVAYELEQQKEILHLGVD---GPMKEKYEKLKKVRFLLESSRMKLDDAIM 515
Query: 1211 LFQNF 1225
+F +F
Sbjct: 516 IFHDF 520
>ref|XP_002872419.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata
subsp. lyrata] gi|297318256|gb|EFH48678.1| RNA polymerase
III subunit RPC82 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 521
Score = 293 bits (749), Expect = 2e-76
Identities = 175/430 (40%), Positives = 259/430 (60%), Gaps = 22/430 (5%)
Frame = +2
Query: 2 IVSEEFGKECQAIVEHLLKHGRLTLEQVLESQSDKVEVQG--ALRVNFVRLVNAHFLEHC 175
IV+EE G EC A+++ LL +GRLTL Q++E D + G A+R + +LV A F+E
Sbjct: 105 IVNEELGSECGAVLDGLLSNGRLTLGQLIERDRDSGKTIGSEAIRDSLQKLVAARFVERI 164
Query: 176 PAGKPSVVPPSKEEASAGKKRVAKFTRIDK-PMTIEELAITAAIPEEAERFHVEAERLYD 352
P+ +P + +E A KKR AK +I K P T+EE + AA P +A RF + +++
Sbjct: 165 PSPEPVLGNKDQEPA---KKRGAKAAKILKEPETLEERVVEAATPVDAIRFPL----IFE 217
Query: 353 EEENNM--DNLPRVTIGEKRKQNAFEMDEDLEDSKKEVIWRVNFEKLVDRLRHKACIANV 526
E+ N+ D+ +T G KRKQ D D D VIWR NFE+ + RLRHKAC+ V
Sbjct: 218 EDFNSSLADDDSNITEG-KRKQR----DVDSSDPSSRVIWRPNFEEFIHRLRHKACVEIV 272
Query: 527 RSRLDEGTVIVLSAVLETNTSETN---------FSLNTIYEKVMQNERGRTMTLDHVRAS 679
+ R DEG IVL A+LE + S+ +IYE+V++ E GRTM + V A
Sbjct: 273 KERRDEGCAIVLRAMLEVGRPQEKKVKTDNSAPMSVGSIYEEVIKTEAGRTMLQERVEAC 332
Query: 680 LAELDCDKTE--------SDEYSIDLKNIIDQARNNEVETLVLKRYGRDAYKIFRLLSKS 835
L +L + +D Y +D K+II A+ +E+E +V++RYG++A+++FR LS+
Sbjct: 333 LDQLSATSSYLPAFVTEMNDSYIVDFKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQE 392
Query: 836 SHLLETDRISDITFMDKMDTPKILYKLWKDGYLHMEKIVLPALRQSELVLWKVNKKTVWE 1015
++TD+I+D +K DTP+IL K+WKDGYLHM+K+ + +LWKVNK V
Sbjct: 393 GRFVDTDKIADAALTEKKDTPQILLKMWKDGYLHMQKLAITG-TYVPFLLWKVNKLIVTR 451
Query: 1016 RVLNDTYHAALNLIQRMASEEEQGGELSRIPSDKRVGEVEERYKRWGKTMVLLESSLMKI 1195
++L++ YHA+LNL R+A E E EL +PSDK G ++ER K+ +LL S++ K+
Sbjct: 452 QMLDEMYHASLNLNLRLAHELESEKELLMLPSDKLEGPLKERVKKVRAKRLLLSSTMFKL 511
Query: 1196 DDALMLFQNF 1225
DDA+MLF +F
Sbjct: 512 DDAIMLFHDF 521