BLASTX nr result

ID: Paeonia24_contig00016288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00016288
         (516 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004503804.1| PREDICTED: signal recognition particle 68 kD...    42   1e-06
ref|XP_003630590.1| Signal recognition particle 68 kDa protein [...    41   6e-06
gb|ACJ85551.1| unknown [Medicago truncatula]                           41   6e-06
ref|XP_003532354.1| PREDICTED: signal recognition particle subun...    41   8e-06
ref|XP_006584688.1| PREDICTED: signal recognition particle subun...    41   8e-06

>ref|XP_004503804.1| PREDICTED: signal recognition particle 68 kDa protein-like isoform
           X1 [Cicer arietinum] gi|502139532|ref|XP_004503805.1|
           PREDICTED: signal recognition particle 68 kDa
           protein-like isoform X2 [Cicer arietinum]
          Length = 603

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 18/30 (60%), Positives = 26/30 (86%)
 Frame = -3

Query: 154 VGKKSKASSIEVEDPKLNNSDQIISKFSIN 65
           +GK+++ S++EV+DPK  NSDQI+ KFSIN
Sbjct: 1   MGKENQLSAMEVDDPKSTNSDQILPKFSIN 30



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -2

Query: 65  RRYFSA*LRRLYKLLTFTHGR 3
           RRY SA LRRLYK L FTHGR
Sbjct: 53  RRYCSARLRRLYKSLKFTHGR 73


>ref|XP_003630590.1| Signal recognition particle 68 kDa protein [Medicago truncatula]
           gi|355524612|gb|AET05066.1| Signal recognition particle
           68 kDa protein [Medicago truncatula]
          Length = 603

 Score = 41.2 bits (95), Expect(2) = 6e-06
 Identities = 17/29 (58%), Positives = 26/29 (89%)
 Frame = -3

Query: 154 VGKKSKASSIEVEDPKLNNSDQIISKFSI 68
           +GK++++S++EV+DPK  NSDQI+ KFSI
Sbjct: 1   MGKENQSSAMEVDDPKSTNSDQIVPKFSI 29



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 65  RRYFSA*LRRLYKLLTFTHGR 3
           RRY +A LRRLYK L FTHGR
Sbjct: 53  RRYCTARLRRLYKSLKFTHGR 73


>gb|ACJ85551.1| unknown [Medicago truncatula]
          Length = 217

 Score = 41.2 bits (95), Expect(2) = 6e-06
 Identities = 17/29 (58%), Positives = 26/29 (89%)
 Frame = -3

Query: 154 VGKKSKASSIEVEDPKLNNSDQIISKFSI 68
           +GK++++S++EV+DPK  NSDQI+ KFSI
Sbjct: 1   MGKENQSSAMEVDDPKSTNSDQIVPKFSI 29



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 65  RRYFSA*LRRLYKLLTFTHGR 3
           RRY +A LRRLYK L FTHGR
Sbjct: 53  RRYCTARLRRLYKSLKFTHGR 73


>ref|XP_003532354.1| PREDICTED: signal recognition particle subunit SRP68-like isoform
           X1 [Glycine max]
          Length = 603

 Score = 40.8 bits (94), Expect(2) = 8e-06
 Identities = 17/30 (56%), Positives = 26/30 (86%)
 Frame = -3

Query: 154 VGKKSKASSIEVEDPKLNNSDQIISKFSIN 65
           +GK+S+AS++E++ PK  +SDQI+ KFSIN
Sbjct: 1   MGKESRASAMEIDAPKSTSSDQIVPKFSIN 30



 Score = 34.3 bits (77), Expect(2) = 8e-06
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 65  RRYFSA*LRRLYKLLTFTHGR 3
           RRY +A LRRLYK L FTHGR
Sbjct: 53  RRYCTARLRRLYKSLKFTHGR 73


>ref|XP_006584688.1| PREDICTED: signal recognition particle subunit SRP68-like isoform
           X2 [Glycine max]
          Length = 492

 Score = 40.8 bits (94), Expect(2) = 8e-06
 Identities = 17/30 (56%), Positives = 26/30 (86%)
 Frame = -3

Query: 154 VGKKSKASSIEVEDPKLNNSDQIISKFSIN 65
           +GK+S+AS++E++ PK  +SDQI+ KFSIN
Sbjct: 1   MGKESRASAMEIDAPKSTSSDQIVPKFSIN 30



 Score = 34.3 bits (77), Expect(2) = 8e-06
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -2

Query: 65  RRYFSA*LRRLYKLLTFTHGR 3
           RRY +A LRRLYK L FTHGR
Sbjct: 53  RRYCTARLRRLYKSLKFTHGR 73


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