BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00015851
         (270 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO16606.1| gag protein [Feline immunodeficiency virus] gi|13...    63   5e-08
gb|ABO16607.1| gag protein [Feline immunodeficiency virus] gi|13...    63   5e-08
gb|AGG09041.1| gag protein, partial [Visna/maedi virus]                62   6e-08
gb|AGG09036.1| gag protein, partial [Visna/maedi virus]                62   8e-08
gb|AGG09030.1| gag protein, partial [Visna/maedi virus]                61   1e-07
emb|CAM35540.2| gag protein [Small ruminant lentivirus]                61   1e-07
gb|ABO16616.1| gag protein [Feline immunodeficiency virus] gi|13...    61   1e-07
gb|AFM72675.1| gag protein, partial [Small ruminant lentivirus]        61   2e-07
gb|ABO16604.1| gag protein [Feline immunodeficiency virus] gi|13...    61   2e-07
gb|AGS54790.1| gag protein, partial [Small ruminant lentivirus]        60   2e-07
gb|AGS54760.1| gag protein, partial [Small ruminant lentivirus]        60   3e-07
gb|AGG09029.1| gag protein, partial [Visna/maedi virus]                60   3e-07
gb|AEY84732.1| gag protein [Small ruminant lentivirus]                 60   3e-07
dbj|BAO52518.1| gag protein [Visna/maedi virus]                        60   4e-07
gb|AGS54476.1| gag protein, partial [Small ruminant lentivirus]        60   4e-07
gb|AFU55231.1| gag protein, partial [Small ruminant lentivirus]        60   4e-07
gb|AFU55230.1| gag protein, partial [Small ruminant lentivirus]        60   4e-07
gb|ABO16605.1| gag protein [Feline immunodeficiency virus] gi|13...    60   4e-07
gb|AGS54686.1| gag protein, partial [Small ruminant lentivirus]        59   5e-07
gb|AGS54652.1| gag protein, partial [Small ruminant lentivirus]        59   5e-07

>gb|ABO16606.1| gag protein [Feline immunodeficiency virus]
           gi|134284761|gb|ABO69457.1| gag [Feline immunodeficiency
           virus]
          Length = 462

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 22/44 (50%), Positives = 32/44 (72%)
 Frame = -2

Query: 167 RQEQKRGNSFSCYRCGKLGHMRKDCRAKIECSRCGKSGHIRQNC 36
           R++Q RG    C+ CGK+GH+ ++CRA   C++CGKSGHI  +C
Sbjct: 376 RKQQNRGGPLKCFNCGKIGHLARNCRAPKRCNKCGKSGHISTDC 419


>gb|ABO16607.1| gag protein [Feline immunodeficiency virus]
           gi|134284768|gb|ABO69463.1| gag [Feline immunodeficiency
           virus]
          Length = 462

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 24/44 (54%), Positives = 31/44 (70%)
 Frame = -2

Query: 167 RQEQKRGNSFSCYRCGKLGHMRKDCRAKIECSRCGKSGHIRQNC 36
           R+ Q RG    C+ CGK+GHM K+CRA   C++CGKSGHI  +C
Sbjct: 376 RKLQNRGGPLKCFNCGKVGHMAKNCRAPKRCNKCGKSGHISTDC 419


>gb|AGG09041.1| gag protein, partial [Visna/maedi virus]
          Length = 401

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/79 (34%), Positives = 41/79 (51%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++        R    RG+   CY CGKLGH+ + CR  
Sbjct: 310 QQATVEEKMQACRDVGSEGFKMQLLAQALRPQRSAGNRGSGQKCYNCGKLGHLARQCRQG 369

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C RCGK GH++++CR K
Sbjct: 370 IICHRCGKRGHMQKDCRQK 388


>gb|AGG09036.1| gag protein, partial [Visna/maedi virus]
          Length = 401

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/82 (32%), Positives = 42/82 (51%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++        R    RG+   CY CGKLGH+ + CR  
Sbjct: 310 QQATVEEKMQACRDVGSEGFKMQLLAQALRPQRSAGNRGSGQKCYNCGKLGHLARQCRQG 369

Query: 83  IECSRCGKSGHIRQNCRVKLTE 18
           I C RCGK GH++++CR +  E
Sbjct: 370 IICHRCGKRGHMQKDCRQRQKE 391


>gb|AGG09030.1| gag protein, partial [Visna/maedi virus]
          Length = 401

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++        R  + RG    CY CGK GH+ K CR  
Sbjct: 310 QQATVEEKMQACRDVGSEGFKMQLLAQALRSERSSRSRGQGQKCYNCGKPGHLAKQCRQG 369

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH++++CR K
Sbjct: 370 IICHHCGKKGHMKRDCRQK 388


>emb|CAM35540.2| gag protein [Small ruminant lentivirus]
          Length = 241

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/82 (30%), Positives = 43/82 (52%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++       +++ +  G    CY CGK+GH+ + CR  
Sbjct: 136 QQASVEEKMQACRDVGSEGFKMQLLAQALRTSKKGENAGGQQKCYNCGKIGHLARQCRQG 195

Query: 83  IECSRCGKSGHIRQNCRVKLTE 18
           I C RCGK GH++++CR K  E
Sbjct: 196 IICHRCGKKGHMQRDCRQKXNE 217


>gb|ABO16616.1| gag protein [Feline immunodeficiency virus]
           gi|134284831|gb|ABO69517.1| gag [Feline immunodeficiency
           virus]
          Length = 462

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 32/52 (61%)
 Frame = -2

Query: 191 QGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAKIECSRCGKSGHIRQNC 36
           Q       R+ Q RG    C+ CGK+GH+ ++CRA   C++CGKSGHI  +C
Sbjct: 368 QVQVKTKGRKLQNRGGPLKCFNCGKIGHLARNCRAPKRCNKCGKSGHISTDC 419


>gb|AFM72675.1| gag protein, partial [Small ruminant lentivirus]
          Length = 137

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       D    ++        R++  +G    CY CGKLGH+ + CR  
Sbjct: 58  QQATVEEKMQACRDVGSDGFKMQLLAQALRPERRQGNKGPGQKCYNCGKLGHLARQCRQG 117

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH+ ++CR K
Sbjct: 118 IICHHCGKRGHMEKDCRQK 136


>gb|ABO16604.1| gag protein [Feline immunodeficiency virus]
           gi|134284743|gb|ABO69441.1| gag [Feline immunodeficiency
           virus]
          Length = 462

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = -2

Query: 167 RQEQKRGNSFSCYRCGKLGHMRKDCRAKIECSRCGKSGHIRQNC 36
           R+ Q RG    C+ CGK GHM ++CRA   C++CGKSGHI  +C
Sbjct: 376 RKLQNRGGPLKCFNCGKAGHMARNCRAPKRCNKCGKSGHISTDC 419


>gb|AGS54790.1| gag protein, partial [Small ruminant lentivirus]
          Length = 165

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/82 (31%), Positives = 43/82 (52%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       + L  ++        ++   RG+   CY CGK GH+ + CR  
Sbjct: 77  QQATVEEKMQACRDVGSEGLKMQLLAQALRPEKRSGNRGSGQKCYNCGKPGHLARQCRQG 136

Query: 83  IECSRCGKSGHIRQNCRVKLTE 18
           I C  CGK GH++++CR K +E
Sbjct: 137 IICHHCGKRGHMQKDCRKKKSE 158


>gb|AGS54760.1| gag protein, partial [Small ruminant lentivirus]
          Length = 165

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = -2

Query: 152 RGNSFSCYRCGKLGHMRKDCRAKIECSRCGKSGHIRQNCRVKLTE 18
           RG+   CY CGKLGH+ + CR  I C  CGK GH++++CR K +E
Sbjct: 114 RGSGQKCYNCGKLGHLARQCRQGIICHHCGKRGHMQKDCRKKKSE 158


>gb|AGG09029.1| gag protein, partial [Visna/maedi virus]
          Length = 401

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/79 (32%), Positives = 38/79 (48%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++        R    RG    CY CGK GH+ K CR  
Sbjct: 310 QQATVEEKMQACRDVGSEGFKMQLLAQALRSERSSGNRGQGQKCYNCGKPGHLAKQCRQG 369

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH++++CR K
Sbjct: 370 IICHHCGKKGHMKRDCRQK 388


>gb|AEY84732.1| gag protein [Small ruminant lentivirus]
          Length = 442

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/79 (31%), Positives = 41/79 (51%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++        R+ Q++G    CY CGK GH+ + CR  
Sbjct: 344 QQATVEEKMQACRDVGSEGFKMQLLAQALRPERKSQRQGXGQKCYNCGKPGHLARQCRQG 403

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH++++CR K
Sbjct: 404 IICHHCGKKGHMQKDCRQK 422


>dbj|BAO52518.1| gag protein [Visna/maedi virus]
          Length = 435

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/82 (32%), Positives = 40/82 (48%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++        R    RG    CY CGK GH+ + CR  
Sbjct: 333 QQATVEEKMQACRDVGSEGFKMQLLAQALKPERNIGNRGGGQKCYNCGKPGHLARQCRQG 392

Query: 83  IECSRCGKSGHIRQNCRVKLTE 18
           I C  CGK GHI+++CR K +E
Sbjct: 393 IICHHCGKKGHIQRDCRKKKSE 414


>gb|AGS54476.1| gag protein, partial [Small ruminant lentivirus]
          Length = 165

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++    S   R    RG   +CY CGK GH+ + CR  
Sbjct: 77  QQATVEEKMQACRDVGSEGFKMQLLAQASRPERNSGNRGAGQNCYNCGKPGHLARQCRQG 136

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH++++CR K
Sbjct: 137 IICHHCGKRGHMQKDCRQK 155


>gb|AFU55231.1| gag protein, partial [Small ruminant lentivirus]
          Length = 198

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++       NR+    G+   CY CGK GH+ + CR  
Sbjct: 94  QQATVEEKMQACRDVGSEGFKMQLLAQALRPNRKVGNAGSGQKCYNCGKTGHLARQCRQG 153

Query: 83  IECSRCGKSGHIRQNCRVKLTE 18
           I C +CGK GH++++CR K  E
Sbjct: 154 IICHQCGKRGHMKKDCRQKQGE 175


>gb|AFU55230.1| gag protein, partial [Small ruminant lentivirus]
          Length = 198

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++       NR+    G+   CY CGK GH+ + CR  
Sbjct: 94  QQATVEEKMQACRDVGSEGFKMQLLAQALRPNRKVGNAGSGQKCYNCGKTGHLARQCRQG 153

Query: 83  IECSRCGKSGHIRQNCRVKLTE 18
           I C +CGK GH++++CR K  E
Sbjct: 154 IICHQCGKRGHMKKDCRQKQGE 175


>gb|ABO16605.1| gag protein [Feline immunodeficiency virus]
           gi|134284754|gb|ABO69451.1| gag [Feline immunodeficiency
           virus]
          Length = 462

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -2

Query: 158 QKRGNSFSCYRCGKLGHMRKDCRAKIECSRCGKSGHIRQNC 36
           Q RG    C+ CGK GHM ++CRA   C++CGKSGHI  +C
Sbjct: 379 QNRGGPLKCFNCGKAGHMARNCRAPKRCNKCGKSGHISTDC 419


>gb|AGS54686.1| gag protein, partial [Small ruminant lentivirus]
          Length = 165

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +    ++   T    R    RG    CY CGK GH+ + CR  
Sbjct: 77  QQASVEEKMQACRDVGSEGFKMQLLAQTLRPERNSGNRGTGQKCYNCGKPGHLARQCRQG 136

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH++++CR K
Sbjct: 137 IICHHCGKRGHMQKDCRQK 155


>gb|AGS54652.1| gag protein, partial [Small ruminant lentivirus]
          Length = 165

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = -2

Query: 263 QEALVKQMSKHAISPVEDALYTKIQGNTSNDNRQEQKRGNSFSCYRCGKLGHMRKDCRAK 84
           Q+A V++  +       +   T++        R    RG    CY CGK GH+ + CR  
Sbjct: 77  QQATVEEKMQACRDVGSEGFKTQLLAQALRPERNSGNRGAGQKCYNCGKPGHLARQCRQG 136

Query: 83  IECSRCGKSGHIRQNCRVK 27
           I C  CGK GH++++CR K
Sbjct: 137 IICHHCGKRGHMQKDCRQK 155