BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00015103
         (599 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              201   1e-49
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   201   1e-49
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   199   5e-49
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   199   5e-49
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   198   1e-48
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   195   9e-48
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   195   9e-48
ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polyme...   195   9e-48
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   195   9e-48
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   194   1e-47
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun...   187   3e-45
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...   185   7e-45
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme...   182   6e-44
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no...   181   1e-43
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr...   179   5e-43
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar...   178   1e-42
gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]            178   1e-42
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid...   177   3e-42
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   176   3e-42
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr...   175   8e-42

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  201 bits (511), Expect = 1e-49
 Identities = 103/166 (62%), Positives = 124/166 (74%)
 Frame = +3

Query: 3   NGSSDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASS 182
           N S+D N+ YNKI +EGI VGLR+YRFFVF          NPT+S VKCYFV  ES A S
Sbjct: 226 NCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNPTSS-VKCYFVFMESSALS 284

Query: 183 DFNKPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIED 362
                     KT+HEARC+FMH H VS++AKYMARFSLILSKT KL+VDL++VN++RI+D
Sbjct: 285 G---------KTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDD 335

Query: 363 IPCRDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
            P RD+DGHVVY ED +PLI TDGTGFISEDLA +CP NL +G ++
Sbjct: 336 EPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYM 381


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  201 bits (511), Expect = 1e-49
 Identities = 103/166 (62%), Positives = 124/166 (74%)
 Frame = +3

Query: 3   NGSSDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASS 182
           N S+D N+ YNKI +EGI VGLR+YRFFVF          NPT+S VKCYFV  ES A S
Sbjct: 234 NCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNPTSS-VKCYFVFMESSALS 292

Query: 183 DFNKPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIED 362
                     KT+HEARC+FMH H VS++AKYMARFSLILSKT KL+VDL++VN++RI+D
Sbjct: 293 G---------KTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDD 343

Query: 363 IPCRDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
            P RD+DGHVVY ED +PLI TDGTGFISEDLA +CP NL +G ++
Sbjct: 344 EPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYM 389


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843311|ref|XP_006475557.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
           sinensis] gi|557554498|gb|ESR64512.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  199 bits (506), Expect = 5e-49
 Identities = 103/162 (63%), Positives = 119/162 (73%)
 Frame = +3

Query: 3   NGSSDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASS 182
           N  +D  S YN+I +EGILVGLR Y FFVF          +P+TSPVKCYFV  ES A  
Sbjct: 273 NNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPSTSPVKCYFVRMESSAFI 332

Query: 183 DFNKPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIED 362
           D    YIL  KT+HEAR MFMHV TVS++A YM+R SLILSKT KLEVD + +N+ERIED
Sbjct: 333 DMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIED 392

Query: 363 IPCRDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFK 488
            PCRD DG+VVY +DGE LIHTDGTGFISEDLA KCP  ++K
Sbjct: 393 EPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYK 433


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843309|ref|XP_006475556.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
           sinensis] gi|557554497|gb|ESR64511.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  199 bits (506), Expect = 5e-49
 Identities = 103/162 (63%), Positives = 119/162 (73%)
 Frame = +3

Query: 3   NGSSDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASS 182
           N  +D  S YN+I +EGILVGLR Y FFVF          +P+TSPVKCYFV  ES A  
Sbjct: 275 NNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPSTSPVKCYFVRMESSAFI 334

Query: 183 DFNKPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIED 362
           D    YIL  KT+HEAR MFMHV TVS++A YM+R SLILSKT KLEVD + +N+ERIED
Sbjct: 335 DMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIED 394

Query: 363 IPCRDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFK 488
            PCRD DG+VVY +DGE LIHTDGTGFISEDLA KCP  ++K
Sbjct: 395 EPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYK 435


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
           gi|548857326|gb|ERN15132.1| hypothetical protein
           AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  198 bits (503), Expect = 1e-48
 Identities = 99/157 (63%), Positives = 114/157 (72%)
 Frame = +3

Query: 30  YNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYILY 209
           + +I K+GILVGLRRY FFVF          N  T+ VKCYFVC +SDA SD + PYIL 
Sbjct: 261 FRRIAKDGILVGLRRYHFFVFKDGGKEEKRKNANTTGVKCYFVCMKSDAESDMHTPYILS 320

Query: 210 KKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDDGH 389
            KTI EAR MFM VHTV  +AKYMARFSLILSKT KLEVDL SVN+ERI D PC D+   
Sbjct: 321 NKTIQEARSMFMDVHTVPNLAKYMARFSLILSKTIKLEVDLGSVNIERINDKPCLDNHNE 380

Query: 390 VVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
           +VY ++G+ LIHTDGTGFISEDL  K  KN+FK  +L
Sbjct: 381 IVYDQNGQCLIHTDGTGFISEDLMSKFSKNIFKERYL 417


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334280|gb|ERP58267.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  195 bits (495), Expect = 9e-48
 Identities = 103/162 (63%), Positives = 119/162 (73%)
 Frame = +3

Query: 15  DINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNK 194
           D  S YNK+L EGI VGLR YRFFVF          +PTTSPVKC+FV  ES AS D N+
Sbjct: 148 DYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCFFVRMESVASID-NQ 206

Query: 195 PYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCR 374
             IL  KTI +AR +FMHV  +S+++ YMARFSLILSKT  LEVDL+ V+++ I D PCR
Sbjct: 207 DNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSCVDIKTIADEPCR 266

Query: 375 DDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
           D DG+VVYG DG+PLIHTDGTGFIS DLA KCPKN FKG  L
Sbjct: 267 DKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFKGTCL 308


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334279|gb|ERP58266.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  195 bits (495), Expect = 9e-48
 Identities = 103/162 (63%), Positives = 119/162 (73%)
 Frame = +3

Query: 15  DINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNK 194
           D  S YNK+L EGI VGLR YRFFVF          +PTTSPVKC+FV  ES AS D N+
Sbjct: 170 DYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCFFVRMESVASID-NQ 228

Query: 195 PYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCR 374
             IL  KTI +AR +FMHV  +S+++ YMARFSLILSKT  LEVDL+ V+++ I D PCR
Sbjct: 229 DNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSCVDIKTIADEPCR 288

Query: 375 DDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
           D DG+VVYG DG+PLIHTDGTGFIS DLA KCPKN FKG  L
Sbjct: 289 DKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFKGTCL 330


>ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Cucumis
           sativus]
          Length = 560

 Score =  195 bits (495), Expect = 9e-48
 Identities = 97/154 (62%), Positives = 118/154 (76%)
 Frame = +3

Query: 30  YNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYILY 209
           Y+KI ++GIL+GLRRY FFVF          NPTTS VKCYFV  ESDA  D  +PY L 
Sbjct: 350 YSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLS 409

Query: 210 KKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDDGH 389
            +T+ EAR +FMH H VS++A YMARFSLILSKT  L++DL++VNV+RI DIPC+D  G+
Sbjct: 410 NRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGN 469

Query: 390 VVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKG 491
           V+Y  DG+PLIHTDGTGFISEDLA +CP N+FKG
Sbjct: 470 VIY-RDGKPLIHTDGTGFISEDLALECPMNVFKG 502


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score =  195 bits (495), Expect = 9e-48
 Identities = 97/154 (62%), Positives = 118/154 (76%)
 Frame = +3

Query: 30  YNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYILY 209
           Y+KI ++GIL+GLRRY FFVF          NPTTS VKCYFV  ESDA  D  +PY L 
Sbjct: 325 YSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLS 384

Query: 210 KKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDDGH 389
            +T+ EAR +FMH H VS++A YMARFSLILSKT  L++DL++VNV+RI DIPC+D  G+
Sbjct: 385 NRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGN 444

Query: 390 VVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKG 491
           V+Y  DG+PLIHTDGTGFISEDLA +CP N+FKG
Sbjct: 445 VIY-RDGKPLIHTDGTGFISEDLALECPMNVFKG 477


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
           gi|550336519|gb|ERP59562.1| hypothetical protein
           POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  194 bits (494), Expect = 1e-47
 Identities = 100/157 (63%), Positives = 117/157 (74%)
 Frame = +3

Query: 30  YNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYILY 209
           YNK+L+EGI VGLR YRFFVF          +PTTSPVKC+FVC ES AS D N+  IL 
Sbjct: 153 YNKVLREGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCFFVCMESVASVD-NQDNILC 211

Query: 210 KKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDDGH 389
            KTI +AR +FMHV  +S+++ YMARFSLILSKT  LEVDL+ V+++ I D PCRD DG+
Sbjct: 212 GKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDLSFVDIKPIADEPCRDKDGN 271

Query: 390 VVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
            VYG DG+PLIHTDGTGFIS DLA KCPKN  KG  L
Sbjct: 272 AVYGTDGKPLIHTDGTGFISHDLALKCPKNQVKGTCL 308


>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
           gi|462399806|gb|EMJ05474.1| hypothetical protein
           PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  187 bits (474), Expect = 3e-45
 Identities = 92/165 (55%), Positives = 118/165 (71%)
 Frame = +3

Query: 24  SGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYI 203
           + Y+K+ +EGILVGLRRY+FFVF          NPT+SPVKCYF+C  S+A+ D ++ Y 
Sbjct: 91  ANYSKVAREGILVGLRRYQFFVFKDGGNKEKKKNPTSSPVKCYFICVGSNAAIDRSEDYK 150

Query: 204 LYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDD 383
              + IHE RC+FMH HTVS+++ YMARFSLILSKT  LEVD + V VE I+D  C D+ 
Sbjct: 151 FSNRKIHETRCIFMHAHTVSSVSNYMARFSLILSKTESLEVDWSLVKVEDIDDEYCLDES 210

Query: 384 GHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHLGTAYRE 518
           G+ +   DG+PLIHTDGTGFISEDLA  CPK+L K +++   Y E
Sbjct: 211 GNRI-DRDGKPLIHTDGTGFISEDLALLCPKDLLKRDYISKEYIE 254


>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
           gi|482565615|gb|EOA29804.1| hypothetical protein
           CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score =  185 bits (470), Expect = 7e-45
 Identities = 94/163 (57%), Positives = 112/163 (68%)
 Frame = +3

Query: 12  SDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFN 191
           SD    Y  I K GI+VGLRRY+FFVF          + +T   KCYF+ T+S AS D  
Sbjct: 269 SDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDSTASIDME 328

Query: 192 KPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPC 371
           KPYI   K+IHEAR  FMHVHT+ ++A YMARFSLILSKT KLEVDL  VN E I+DIPC
Sbjct: 329 KPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFEIIKDIPC 388

Query: 372 RDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
            D DG  V  ++ +P IH+DGTG+ISEDLAQ CP N++KG  L
Sbjct: 389 HDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKGKCL 431


>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 759

 Score =  182 bits (462), Expect = 6e-44
 Identities = 93/156 (59%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
 Frame = +3

Query: 36  KILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTS--PVKCYFVCTESDASSDFNKPYILY 209
           +I++ GILVGLRRYRFFV+          +       VKCYFV  ES    + N+ YIL+
Sbjct: 313 EIVQNGILVGLRRYRFFVYKDDGKKRRLKDKEEKIDSVKCYFVRMESLNPYE-NETYILH 371

Query: 210 KKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDDGH 389
            K +HEARC FMHVH VS+MAKYMARFSLILS T KL+VDL SVN++RIEDI C D  G 
Sbjct: 372 DKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVDLNSVNIDRIEDIYCHDKSGR 431

Query: 390 VVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNH 497
           ++Y EDG+PLIHTDGTG+ISEDLA+KCP++ F   H
Sbjct: 432 IIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKH 467


>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
          Length = 529

 Score =  181 bits (460), Expect = 1e-43
 Identities = 92/155 (59%), Positives = 115/155 (74%)
 Frame = +3

Query: 24  SGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYI 203
           +GY+KI +EGILVGLRRY FFVF          +PT+SPVKC+F+   SDA  D N  YI
Sbjct: 251 AGYSKICREGILVGLRRYCFFVFKDGGKEEKKKDPTSSPVKCFFIRIHSDACIDQNVSYI 310

Query: 204 LYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDD 383
           L  +TI EAR +FMH HTVS+++ YM RFSLILS T  L++DL+SVN++ IED  C+D+ 
Sbjct: 311 LSGRTISEARKLFMHAHTVSSVSNYMIRFSLILSNTLSLKIDLSSVNIDIIEDEYCQDES 370

Query: 384 GHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFK 488
           G+ +Y  DG+PLI+TDGTGFISEDLA  CPKNL K
Sbjct: 371 GNPIY-RDGKPLIYTDGTGFISEDLALLCPKNLEK 404


>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
           gi|557110064|gb|ESQ50361.1| hypothetical protein
           EUTSA_v10001897mg [Eutrema salsugineum]
          Length = 988

 Score =  179 bits (454), Expect = 5e-43
 Identities = 88/164 (53%), Positives = 117/164 (71%)
 Frame = +3

Query: 9   SSDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDF 188
           S+D  S Y +I K GI+VGLRRY+FFVF          + +T+ VKCYF+ T+S A++D 
Sbjct: 272 SNDRYSAYKRIAKNGIMVGLRRYQFFVFKDVGKAEKKKDFSTNGVKCYFIRTDSTAANDM 331

Query: 189 NKPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIP 368
            K YI   KTI+EAR  FMHVHT+ ++AKYMARFSLILSKT KLEVD+  +  + I++I 
Sbjct: 332 GKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQEIKEIH 391

Query: 369 CRDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
           C D + +VV  ++ EP +H+DGTG+ISEDLA+ CP N+FKG  L
Sbjct: 392 CHDQNNNVVLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCL 435


>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
           gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 4;
           Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
           4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
           polymerase family protein [Arabidopsis thaliana]
          Length = 927

 Score =  178 bits (451), Expect = 1e-42
 Identities = 93/173 (53%), Positives = 114/173 (65%), Gaps = 6/173 (3%)
 Frame = +3

Query: 24  SGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYI 203
           S Y +I K GI+VGLRRY+FFVF            +T  VKCYF+ T S ASSD   PYI
Sbjct: 269 SKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPYI 328

Query: 204 LYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDD 383
           L   +IHEAR  FMHVHT+ + A YMARFSLILSKT KLEVD+  + V +I+DI C D  
Sbjct: 329 LSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIHCHDQS 388

Query: 384 GHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKG------NHLGTAYREFP 524
            + V  ++G+P IH+DGTG+ISEDLA+ CP N+FKG      N  GT  +E P
Sbjct: 389 NNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTCVQEPP 441


>gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]
          Length = 905

 Score =  178 bits (451), Expect = 1e-42
 Identities = 93/173 (53%), Positives = 114/173 (65%), Gaps = 6/173 (3%)
 Frame = +3

Query: 24  SGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFNKPYI 203
           S Y +I K GI+VGLRRY+FFVF            +T  VKCYF+ T S ASSD   PYI
Sbjct: 274 SKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPYI 333

Query: 204 LYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDD 383
           L   +IHEAR  FMHVHT+ + A YMARFSLILSKT KLEVD+  + V +I+DI C D  
Sbjct: 334 LSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIHCHDQS 393

Query: 384 GHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKG------NHLGTAYREFP 524
            + V  ++G+P IH+DGTG+ISEDLA+ CP N+FKG      N  GT  +E P
Sbjct: 394 NNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTCVQEPP 446


>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
           gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 3;
           Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
           3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 992

 Score =  177 bits (448), Expect = 3e-42
 Identities = 86/163 (52%), Positives = 112/163 (68%)
 Frame = +3

Query: 12  SDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFN 191
           +D+ S Y  I K GI+VGLRRYRFFVF          + +T  VKCYF+ T+S AS D  
Sbjct: 265 NDLYSTYKGIAKNGIMVGLRRYRFFVFKDGGKEEKKKDVSTKGVKCYFIRTDSTASIDMQ 324

Query: 192 KPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPC 371
            PYI   K++HEAR  FMHV+T+S++  YM+RFSLILSKT  LEVD+  +  E+I+DI C
Sbjct: 325 NPYIFAGKSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTKTLEVDMTGITFEQIDDIHC 384

Query: 372 RDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHL 500
            D D   V  ++G+P IH+DGTG+ISEDLA+ CP N+FKG  +
Sbjct: 385 HDQDDKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSM 427


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 1110

 Score =  176 bits (447), Expect = 3e-42
 Identities = 91/156 (58%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
 Frame = +3

Query: 36  KILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTS--PVKCYFVCTESDASSDFNKPYILY 209
           +I++ GILVGLRRYRFFV+          +       VKCYFV  ES    +  + YIL 
Sbjct: 369 EIVQNGILVGLRRYRFFVYKDDGKKRSSKDKEEKIDSVKCYFVRMESLNPYE-KETYILR 427

Query: 210 KKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPCRDDDGH 389
            K +HEARC FMHVH VS+MAKYMARFSL LS T KL+VDL SVN++RIEDI C D  G 
Sbjct: 428 DKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNSVNIDRIEDICCHDKSGR 487

Query: 390 VVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNH 497
           ++Y EDG+PLIHTDGTG+ISEDLA+KCP++ F   H
Sbjct: 488 IIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKH 523


>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
           gi|557110063|gb|ESQ50360.1| hypothetical protein
           EUTSA_v10001896mg [Eutrema salsugineum]
          Length = 988

 Score =  175 bits (444), Expect = 8e-42
 Identities = 85/164 (51%), Positives = 113/164 (68%)
 Frame = +3

Query: 12  SDINSGYNKILKEGILVGLRRYRFFVFXXXXXXXXXXNPTTSPVKCYFVCTESDASSDFN 191
           +D+ S Y  I K GI+VGLRRY+FFVF          + +T  VKCYF+ T+S AS D  
Sbjct: 246 NDLYSTYKGIAKNGIMVGLRRYQFFVFKDGGKEEKKKDFSTKGVKCYFIRTDSTASIDLQ 305

Query: 192 KPYILYKKTIHEARCMFMHVHTVSTMAKYMARFSLILSKTTKLEVDLASVNVERIEDIPC 371
            PY    K+IHEAR  FMHV+T+ ++A YMARFSLILSKT KLEVD+  +  ++I+DI C
Sbjct: 306 NPYFFSGKSIHEARMHFMHVNTLPSLANYMARFSLILSKTKKLEVDMTGITFQQIDDIHC 365

Query: 372 RDDDGHVVYGEDGEPLIHTDGTGFISEDLAQKCPKNLFKGNHLG 503
            D + + V  + G+P IH+DGTG+ISEDLA+ CP ++FKG  +G
Sbjct: 366 HDQENNNVLDKHGKPCIHSDGTGYISEDLARMCPTDIFKGKCIG 409