BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00010905
         (589 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   306   3e-81
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   304   1e-80
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   297   2e-78
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   297   2e-78
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   296   4e-78
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   293   2e-77
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   291   7e-77
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      290   2e-76
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   290   2e-76
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   290   3e-76
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   289   3e-76
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   289   3e-76
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   289   3e-76
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   289   3e-76
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   289   5e-76
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   289   5e-76
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   288   8e-76
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   288   8e-76
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   288   8e-76
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      288   8e-76

>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  306 bits (784), Expect = 3e-81
 Identities = 158/200 (79%), Positives = 173/200 (86%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
           SKETL V + EIEIIPDIE+     TYVFSDGIGKISA+ A  VAIKCG +SSTPSAFQI
Sbjct: 40  SKETLKVAKHEIEIIPDIEIHRDGTTYVFSDGIGKISAELAHRVAIKCGCKSSTPSAFQI 99

Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
           RYGGYKGVVAVDP S  KLSLR+SM KY+SENT LDVL+WSK++PCFLNRQL+TLLSTLG
Sbjct: 100 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLG 159

Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
           V D VFEKKQ E + QLD ILKDPLRAQ+ALELMS GENTNIL EMLMCGYKPD EPFLS
Sbjct: 160 VKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLS 219

Query: 61  MMLQIFRASRLLDLRTKTRI 2
           MMLQ FRA++LL+LRTKTRI
Sbjct: 220 MMLQTFRAAKLLELRTKTRI 239


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  304 bits (778), Expect = 1e-80
 Identities = 157/200 (78%), Positives = 172/200 (86%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            SKETL V + EIEIIPDIE      TYVFSDGIGKISA+ A  VAIKCG ++STPSAFQI
Sbjct: 496  SKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQI 555

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVAVDP S  KLSLR+SM KY+SENT LDVL+WSK++PCFLNRQL+TLLSTLG
Sbjct: 556  RYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLG 615

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D VFEKKQ E + QLD ILKDPLRAQ+ALELMS GENTNIL EMLMCGYKPD EPFLS
Sbjct: 616  VKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLS 675

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRA++LL+LRTKTRI
Sbjct: 676  MMLQTFRAAKLLELRTKTRI 695


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  297 bits (760), Expect = 2e-78
 Identities = 154/200 (77%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            SKETL V +DEIE IPDIE+     TYVFSDGIGKIS Q A  VAIKCG +SSTPSAFQI
Sbjct: 498  SKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQI 557

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVAVDP S  KLSLR+SM KY+S+NT LDVLAWSK+QP FLNRQL+TLLSTLG
Sbjct: 558  RYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLG 617

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D VFEKKQ   + QLD ILKDP+ AQ+ALELMS GENTN+L EMLMCGYKPD EPFLS
Sbjct: 618  VKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLS 677

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRA++LL+LRTKTRI
Sbjct: 678  MMLQTFRAAKLLELRTKTRI 697


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  297 bits (760), Expect = 2e-78
 Identities = 154/200 (77%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
           SKETL V +DEIE IPDIE+     TYVFSDGIGKIS Q A  VAIKCG +SSTPSAFQI
Sbjct: 40  SKETLKVAKDEIENIPDIEIHKXRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQI 99

Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
           RYGGYKGVVAVDP S  KLSLR+SM KY+S+NT LDVLAWSK+QP FLNRQL+TLLSTLG
Sbjct: 100 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLG 159

Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
           V D VFEKKQ   + QLD ILKDP+ AQ+ALELMS GENTN+L EMLMCGYKPD EPFLS
Sbjct: 160 VKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLS 219

Query: 61  MMLQIFRASRLLDLRTKTRI 2
           MMLQ FRA++LL+LRTKTRI
Sbjct: 220 MMLQTFRAAKLLELRTKTRI 239


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  296 bits (757), Expect = 4e-78
 Identities = 150/200 (75%), Positives = 173/200 (86%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            SKETLSV  DEIEIIPD++++     YVFSDGIGK+SA+FA+ VA KCGL+ + PSAFQI
Sbjct: 513  SKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQI 572

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVA DP S  KLSLR SM KY+SE TKLDVLAWSK+QPCFLNRQL++LLSTLG
Sbjct: 573  RYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLG 632

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            + D++FEKKQ E + QLDAIL DPL+AQ+ALELMS GENTNIL E+L+CGYKPD EPFLS
Sbjct: 633  IWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLS 692

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTKTRI
Sbjct: 693  MMLQTFRASKLLELRTKTRI 712


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  293 bits (750), Expect = 2e-77
 Identities = 152/200 (76%), Positives = 171/200 (85%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S ETLSV +DEIEII D+E+K     YVFSDGIGKISA+FA+ VA KC L   TPSAFQI
Sbjct: 502  STETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAAKCRLNGRTPSAFQI 561

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            R GG+KGVVAVDP S  KLSLR SMSKY+SENTKLDVLAWSK+QPCFLNRQL+TLLSTLG
Sbjct: 562  RIGGFKGVVAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D  FE+KQ EV+ QL+AIL DPL+AQ+ALELMS GENTNIL EML+CGY+PD EPFLS
Sbjct: 622  VPDHAFEEKQREVVDQLNAILTDPLKAQEALELMSPGENTNILKEMLLCGYEPDAEPFLS 681

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTK+RI
Sbjct: 682  MMLQTFRASKLLELRTKSRI 701


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  291 bits (746), Expect = 7e-77
 Identities = 154/200 (77%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S ETLSV   EIEIIPDIEV      Y+FSDGIGKISA+FA+ VAIKCG +  TPSAFQI
Sbjct: 509  STETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQI 568

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RY GYKGVVAVDP S  KLSLRRSM KY+SENTKLDVLA SK+QPCFLNRQL+TLLSTLG
Sbjct: 569  RYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLG 628

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D  FE+KQ E + QLDA+L DPLRAQ+ALELMS GENTNIL EML+CGY+PD EPFLS
Sbjct: 629  VPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLS 688

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTKTRI
Sbjct: 689  MMLQTFRASKLLELRTKTRI 708


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  290 bits (743), Expect = 2e-76
 Identities = 149/200 (74%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S ETLSV +DEI +IPDIE+      YVFSDGIGKISA+FA+ VA KC L+  TPSAFQI
Sbjct: 502  STETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQI 561

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            R GG+KGVVA+DP S  KLSLR+SM KY+SENTKLDVLAWSK+QPCFLNRQL+TLLSTLG
Sbjct: 562  RIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D  FEKKQ EV+ QL+A+L DPL AQ+ALELMS GENTNIL EML+CGYKPD EPFLS
Sbjct: 622  VPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLS 681

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MML+ FRAS+LL+LRTK RI
Sbjct: 682  MMLETFRASKLLELRTKARI 701


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  290 bits (742), Expect = 2e-76
 Identities = 153/198 (77%), Positives = 170/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
            SKETLSV R EIEIIPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 498  SKETLSVLRHEIEIIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 556

Query: 415  GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
            GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPCFLNRQLVTLLSTLGV 
Sbjct: 557  GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCFLNRQLVTLLSTLGVK 616

Query: 235  DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
            DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 617  DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 676

Query: 55   LQIFRASRLLDLRTKTRI 2
            LQ FRAS+LLDLRT++RI
Sbjct: 677  LQTFRASKLLDLRTRSRI 694


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  290 bits (741), Expect = 3e-76
 Identities = 147/200 (73%), Positives = 172/200 (86%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S+ETL+V  DEIE+IPD+E+ +    YVFSDGIGKISA+FA+ VA KCGL   +PSAFQI
Sbjct: 507  SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 566

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVAVDP S  KLSLR+SMSK++SENTKLDVLAWSK+QPC++NRQL+TLLSTLG
Sbjct: 567  RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 626

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL  +++CGYKPD EPFLS
Sbjct: 627  VEDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLS 686

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTKTRI
Sbjct: 687  MMLQNFRASKLLELRTKTRI 706


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  289 bits (740), Expect = 3e-76
 Identities = 146/200 (73%), Positives = 172/200 (86%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S+ETL+V  DEIE+IPD+E+ +    YVFSDGIGKISA+FA+ VA KCGL   +PSAFQI
Sbjct: 497  SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 556

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVAVDP S  KLSLR+SMSK++SENTKLDVLAWSK+QPC++NRQL+TLLSTLG
Sbjct: 557  RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 616

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            + D VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL  +++CGYKPD EPFLS
Sbjct: 617  IKDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLS 676

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTKTRI
Sbjct: 677  MMLQNFRASKLLELRTKTRI 696


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  289 bits (740), Expect = 3e-76
 Identities = 150/198 (75%), Positives = 170/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
            SKETLSV R EIE+IPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 497  SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 555

Query: 415  GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
            GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQL+TLLSTLGV 
Sbjct: 556  GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLITLLSTLGVK 615

Query: 235  DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
            DD+ E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 616  DDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 675

Query: 55   LQIFRASRLLDLRTKTRI 2
            LQ FRAS+LLDLRTK+RI
Sbjct: 676  LQTFRASKLLDLRTKSRI 693


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  289 bits (740), Expect = 3e-76
 Identities = 150/198 (75%), Positives = 170/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
           SKETLSV R EIE+IPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 346 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 404

Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
           GGYKGVVAVDP S +KL+LR+SMSKY+S+N KLDVL WSK+QPCFLNRQL+TLLSTLGV 
Sbjct: 405 GGYKGVVAVDPYSSMKLTLRKSMSKYESDNNKLDVLGWSKYQPCFLNRQLITLLSTLGVR 464

Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
           DD+ E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 465 DDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 524

Query: 55  LQIFRASRLLDLRTKTRI 2
           LQ FRAS+LLDLRTK+RI
Sbjct: 525 LQTFRASKLLDLRTKSRI 542


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  289 bits (740), Expect = 3e-76
 Identities = 151/198 (76%), Positives = 170/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
           SKETLSV R EIE+IPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 346 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 404

Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
           GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQL+TLLSTLGV 
Sbjct: 405 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCYLNRQLITLLSTLGVK 464

Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
           DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 465 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 524

Query: 55  LQIFRASRLLDLRTKTRI 2
           LQ FRAS+LLDLRTK+RI
Sbjct: 525 LQTFRASKLLDLRTKSRI 542


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  289 bits (739), Expect = 5e-76
 Identities = 151/198 (76%), Positives = 170/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
            SKETLSV R EIE+IPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 498  SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 556

Query: 415  GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
            GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQLVTLLSTLGV 
Sbjct: 557  GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 616

Query: 235  DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
            DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 617  DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 676

Query: 55   LQIFRASRLLDLRTKTRI 2
            LQ FRAS+LLDLRT++RI
Sbjct: 677  LQTFRASKLLDLRTRSRI 694


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  289 bits (739), Expect = 5e-76
 Identities = 151/198 (76%), Positives = 170/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
            SKETLSV R EIE+IPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 464  SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 522

Query: 415  GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
            GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQLVTLLSTLGV 
Sbjct: 523  GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 582

Query: 235  DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
            DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 583  DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 642

Query: 55   LQIFRASRLLDLRTKTRI 2
            LQ FRAS+LLDLRT++RI
Sbjct: 643  LQTFRASKLLDLRTRSRI 660


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  288 bits (737), Expect = 8e-76
 Identities = 151/198 (76%), Positives = 169/198 (85%), Gaps = 2/198 (1%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416
            S ETLSV R EIE+IPD++V   +YVFSDGIGKISA FA+ VA KCGL+  TPSAFQIRY
Sbjct: 498  STETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQH-TPSAFQIRY 556

Query: 415  GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236
            GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQLVTLLSTLGV 
Sbjct: 557  GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 616

Query: 235  DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56
            DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL  ML CGY PD EPFLSMM
Sbjct: 617  DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 676

Query: 55   LQIFRASRLLDLRTKTRI 2
            LQ FRAS+LLDLRTK+RI
Sbjct: 677  LQTFRASKLLDLRTKSRI 694


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
            gi|482575337|gb|EOA39524.1| hypothetical protein
            CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  288 bits (737), Expect = 8e-76
 Identities = 147/200 (73%), Positives = 171/200 (85%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S+ETL+V  DEIE+IPD+E       YVFSDGIGKISA+FA+ VA KCGL   +PSAFQI
Sbjct: 506  SRETLNVRSDEIEVIPDVEAMYLDTRYVFSDGIGKISAEFARKVAKKCGLTEFSPSAFQI 565

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVAVDP S  KLSLR+SMSK++S NTKLDVLAWSK+QPC+LNRQ++TLLSTLG
Sbjct: 566  RYGGYKGVVAVDPNSSKKLSLRKSMSKFESGNTKLDVLAWSKYQPCYLNRQIITLLSTLG 625

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D+VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL ++L+CGYKPD EPFLS
Sbjct: 626  VKDNVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKQLLLCGYKPDAEPFLS 685

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTKTRI
Sbjct: 686  MMLQNFRASKLLELRTKTRI 705


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  288 bits (737), Expect = 8e-76
 Identities = 146/200 (73%), Positives = 172/200 (86%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S+ETL+V  DEIE+IPD+E+ +    YVFSDGIGKISA+FA+ VA KCGL   +PSAFQI
Sbjct: 507  SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 566

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            RYGGYKGVVAVDP S  KLSLR+SMSK++SENTKLDVLAWSK+QPC++NRQL+TLLSTLG
Sbjct: 567  RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 626

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D VF+KKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL  +++CGYKPD EPFLS
Sbjct: 627  VKDSVFKKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLS 686

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MMLQ FRAS+LL+LRTKTRI
Sbjct: 687  MMLQNFRASKLLELRTKTRI 706


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  288 bits (737), Expect = 8e-76
 Identities = 148/200 (74%), Positives = 168/200 (84%), Gaps = 4/200 (2%)
 Frame = -1

Query: 589  SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422
            S ETLSV +DEI +IPDIE+      YVF DGIGKISA+FA+ VA KC L+  TPSAFQI
Sbjct: 502  STETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQI 561

Query: 421  RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242
            R GG+KGVVA+DP S  KLSLR+SM KY+SENTKLDVLAWSK+QPCFLNRQL+TLLSTLG
Sbjct: 562  RIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621

Query: 241  VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62
            V D  FEKKQ EV+ QL+A+L DPL AQ+ALELMS GENTNIL EML+CGYKPD EPFLS
Sbjct: 622  VPDYAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLS 681

Query: 61   MMLQIFRASRLLDLRTKTRI 2
            MML+ FRAS+LL+LRTK RI
Sbjct: 682  MMLETFRASKLLELRTKARI 701