BLASTX nr result
ID: Paeonia24_contig00010905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia24_contig00010905 (589 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 306 3e-81 ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 304 1e-80 ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 297 2e-78 emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 297 2e-78 ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 296 4e-78 ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 293 2e-77 ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 291 7e-77 gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 290 2e-76 ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 290 2e-76 ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 290 3e-76 ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 289 3e-76 gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 289 3e-76 gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de... 289 3e-76 gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 289 3e-76 gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu... 289 5e-76 gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 289 5e-76 ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 288 8e-76 ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 288 8e-76 emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 288 8e-76 gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 288 8e-76 >emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] Length = 697 Score = 306 bits (784), Expect = 3e-81 Identities = 158/200 (79%), Positives = 173/200 (86%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 SKETL V + EIEIIPDIE+ TYVFSDGIGKISA+ A VAIKCG +SSTPSAFQI Sbjct: 40 SKETLKVAKHEIEIIPDIEIHRDGTTYVFSDGIGKISAELAHRVAIKCGCKSSTPSAFQI 99 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SM KY+SENT LDVL+WSK++PCFLNRQL+TLLSTLG Sbjct: 100 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLG 159 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D VFEKKQ E + QLD ILKDPLRAQ+ALELMS GENTNIL EMLMCGYKPD EPFLS Sbjct: 160 VKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLS 219 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRA++LL+LRTKTRI Sbjct: 220 MMLQTFRAAKLLELRTKTRI 239 >ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera] Length = 1109 Score = 304 bits (778), Expect = 1e-80 Identities = 157/200 (78%), Positives = 172/200 (86%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 SKETL V + EIEIIPDIE TYVFSDGIGKISA+ A VAIKCG ++STPSAFQI Sbjct: 496 SKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQI 555 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SM KY+SENT LDVL+WSK++PCFLNRQL+TLLSTLG Sbjct: 556 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLG 615 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D VFEKKQ E + QLD ILKDPLRAQ+ALELMS GENTNIL EMLMCGYKPD EPFLS Sbjct: 616 VKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLS 675 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRA++LL+LRTKTRI Sbjct: 676 MMLQTFRAAKLLELRTKTRI 695 >ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera] Length = 1121 Score = 297 bits (760), Expect = 2e-78 Identities = 154/200 (77%), Positives = 169/200 (84%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 SKETL V +DEIE IPDIE+ TYVFSDGIGKIS Q A VAIKCG +SSTPSAFQI Sbjct: 498 SKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQI 557 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SM KY+S+NT LDVLAWSK+QP FLNRQL+TLLSTLG Sbjct: 558 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLG 617 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D VFEKKQ + QLD ILKDP+ AQ+ALELMS GENTN+L EMLMCGYKPD EPFLS Sbjct: 618 VKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLS 677 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRA++LL+LRTKTRI Sbjct: 678 MMLQTFRAAKLLELRTKTRI 697 >emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] Length = 654 Score = 297 bits (760), Expect = 2e-78 Identities = 154/200 (77%), Positives = 169/200 (84%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 SKETL V +DEIE IPDIE+ TYVFSDGIGKIS Q A VAIKCG +SSTPSAFQI Sbjct: 40 SKETLKVAKDEIENIPDIEIHKXRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQI 99 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SM KY+S+NT LDVLAWSK+QP FLNRQL+TLLSTLG Sbjct: 100 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLG 159 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D VFEKKQ + QLD ILKDP+ AQ+ALELMS GENTN+L EMLMCGYKPD EPFLS Sbjct: 160 VKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLS 219 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRA++LL+LRTKTRI Sbjct: 220 MMLQTFRAAKLLELRTKTRI 239 >ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis] Length = 1132 Score = 296 bits (757), Expect = 4e-78 Identities = 150/200 (75%), Positives = 173/200 (86%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 SKETLSV DEIEIIPD++++ YVFSDGIGK+SA+FA+ VA KCGL+ + PSAFQI Sbjct: 513 SKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQI 572 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVA DP S KLSLR SM KY+SE TKLDVLAWSK+QPCFLNRQL++LLSTLG Sbjct: 573 RYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLG 632 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 + D++FEKKQ E + QLDAIL DPL+AQ+ALELMS GENTNIL E+L+CGYKPD EPFLS Sbjct: 633 IWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLS 692 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTKTRI Sbjct: 693 MMLQTFRASKLLELRTKTRI 712 >ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|590697846|ref|XP_007045553.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|590697850|ref|XP_007045554.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] Length = 1109 Score = 293 bits (750), Expect = 2e-77 Identities = 152/200 (76%), Positives = 171/200 (85%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S ETLSV +DEIEII D+E+K YVFSDGIGKISA+FA+ VA KC L TPSAFQI Sbjct: 502 STETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAAKCRLNGRTPSAFQI 561 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 R GG+KGVVAVDP S KLSLR SMSKY+SENTKLDVLAWSK+QPCFLNRQL+TLLSTLG Sbjct: 562 RIGGFKGVVAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D FE+KQ EV+ QL+AIL DPL+AQ+ALELMS GENTNIL EML+CGY+PD EPFLS Sbjct: 622 VPDHAFEEKQREVVDQLNAILTDPLKAQEALELMSPGENTNILKEMLLCGYEPDAEPFLS 681 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTK+RI Sbjct: 682 MMLQTFRASKLLELRTKSRI 701 >ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa] gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa] Length = 1133 Score = 291 bits (746), Expect = 7e-77 Identities = 154/200 (77%), Positives = 169/200 (84%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S ETLSV EIEIIPDIEV Y+FSDGIGKISA+FA+ VAIKCG + TPSAFQI Sbjct: 509 STETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQI 568 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RY GYKGVVAVDP S KLSLRRSM KY+SENTKLDVLA SK+QPCFLNRQL+TLLSTLG Sbjct: 569 RYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLG 628 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D FE+KQ E + QLDA+L DPLRAQ+ALELMS GENTNIL EML+CGY+PD EPFLS Sbjct: 629 VPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLS 688 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTKTRI Sbjct: 689 MMLQTFRASKLLELRTKTRI 708 >gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] Length = 1110 Score = 290 bits (743), Expect = 2e-76 Identities = 149/200 (74%), Positives = 169/200 (84%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S ETLSV +DEI +IPDIE+ YVFSDGIGKISA+FA+ VA KC L+ TPSAFQI Sbjct: 502 STETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQI 561 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 R GG+KGVVA+DP S KLSLR+SM KY+SENTKLDVLAWSK+QPCFLNRQL+TLLSTLG Sbjct: 562 RIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D FEKKQ EV+ QL+A+L DPL AQ+ALELMS GENTNIL EML+CGYKPD EPFLS Sbjct: 622 VPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLS 681 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MML+ FRAS+LL+LRTK RI Sbjct: 682 MMLETFRASKLLELRTKARI 701 >ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum] Length = 1115 Score = 290 bits (742), Expect = 2e-76 Identities = 153/198 (77%), Positives = 170/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 SKETLSV R EIEIIPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 498 SKETLSVLRHEIEIIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 556 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPCFLNRQLVTLLSTLGV Sbjct: 557 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCFLNRQLVTLLSTLGVK 616 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 617 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 676 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRT++RI Sbjct: 677 LQTFRASKLLDLRTRSRI 694 >ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] Length = 1107 Score = 290 bits (741), Expect = 3e-76 Identities = 147/200 (73%), Positives = 172/200 (86%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S+ETL+V DEIE+IPD+E+ + YVFSDGIGKISA+FA+ VA KCGL +PSAFQI Sbjct: 507 SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 566 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SMSK++SENTKLDVLAWSK+QPC++NRQL+TLLSTLG Sbjct: 567 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 626 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL +++CGYKPD EPFLS Sbjct: 627 VEDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLS 686 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTKTRI Sbjct: 687 MMLQNFRASKLLELRTKTRI 706 >ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] Length = 1097 Score = 289 bits (740), Expect = 3e-76 Identities = 146/200 (73%), Positives = 172/200 (86%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S+ETL+V DEIE+IPD+E+ + YVFSDGIGKISA+FA+ VA KCGL +PSAFQI Sbjct: 497 SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 556 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SMSK++SENTKLDVLAWSK+QPC++NRQL+TLLSTLG Sbjct: 557 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 616 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 + D VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL +++CGYKPD EPFLS Sbjct: 617 IKDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLS 676 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTKTRI Sbjct: 677 MMLQNFRASKLLELRTKTRI 696 >gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum] Length = 1065 Score = 289 bits (740), Expect = 3e-76 Identities = 150/198 (75%), Positives = 170/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 497 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 555 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQL+TLLSTLGV Sbjct: 556 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLITLLSTLGVK 615 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DD+ E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 616 DDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 675 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRTK+RI Sbjct: 676 LQTFRASKLLDLRTKSRI 693 >gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum] Length = 1021 Score = 289 bits (740), Expect = 3e-76 Identities = 150/198 (75%), Positives = 170/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 346 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 404 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KL+LR+SMSKY+S+N KLDVL WSK+QPCFLNRQL+TLLSTLGV Sbjct: 405 GGYKGVVAVDPYSSMKLTLRKSMSKYESDNNKLDVLGWSKYQPCFLNRQLITLLSTLGVR 464 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DD+ E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 465 DDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 524 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRTK+RI Sbjct: 525 LQTFRASKLLDLRTKSRI 542 >gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum] Length = 963 Score = 289 bits (740), Expect = 3e-76 Identities = 151/198 (76%), Positives = 170/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 346 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 404 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQL+TLLSTLGV Sbjct: 405 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCYLNRQLITLLSTLGVK 464 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 465 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 524 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRTK+RI Sbjct: 525 LQTFRASKLLDLRTKSRI 542 >gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum] Length = 841 Score = 289 bits (739), Expect = 5e-76 Identities = 151/198 (76%), Positives = 170/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 498 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 556 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQLVTLLSTLGV Sbjct: 557 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 616 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 617 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 676 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRT++RI Sbjct: 677 LQTFRASKLLDLRTRSRI 694 >gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum] Length = 1180 Score = 289 bits (739), Expect = 5e-76 Identities = 151/198 (76%), Positives = 170/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 464 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 522 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQLVTLLSTLGV Sbjct: 523 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 582 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 583 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 642 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRT++RI Sbjct: 643 LQTFRASKLLDLRTRSRI 660 >ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Solanum tuberosum] Length = 1115 Score = 288 bits (737), Expect = 8e-76 Identities = 151/198 (76%), Positives = 169/198 (85%), Gaps = 2/198 (1%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 416 S ETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY Sbjct: 498 STETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQH-TPSAFQIRY 556 Query: 415 GGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLGVG 236 GGYKGVVAVDP S +KLSLR+SMSKY+S+N KLDVL WSK+QPC+LNRQLVTLLSTLGV Sbjct: 557 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 616 Query: 235 DDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLSMM 56 DDV E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL ML CGY PD EPFLSMM Sbjct: 617 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMM 676 Query: 55 LQIFRASRLLDLRTKTRI 2 LQ FRAS+LLDLRTK+RI Sbjct: 677 LQTFRASKLLDLRTKSRI 694 >ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella] gi|482575337|gb|EOA39524.1| hypothetical protein CARUB_v10008144mg [Capsella rubella] Length = 1107 Score = 288 bits (737), Expect = 8e-76 Identities = 147/200 (73%), Positives = 171/200 (85%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S+ETL+V DEIE+IPD+E YVFSDGIGKISA+FA+ VA KCGL +PSAFQI Sbjct: 506 SRETLNVRSDEIEVIPDVEAMYLDTRYVFSDGIGKISAEFARKVAKKCGLTEFSPSAFQI 565 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SMSK++S NTKLDVLAWSK+QPC+LNRQ++TLLSTLG Sbjct: 566 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESGNTKLDVLAWSKYQPCYLNRQIITLLSTLG 625 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D+VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL ++L+CGYKPD EPFLS Sbjct: 626 VKDNVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKQLLLCGYKPDAEPFLS 685 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTKTRI Sbjct: 686 MMLQNFRASKLLELRTKTRI 705 >emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri] Length = 1107 Score = 288 bits (737), Expect = 8e-76 Identities = 146/200 (73%), Positives = 172/200 (86%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S+ETL+V DEIE+IPD+E+ + YVFSDGIGKISA+FA+ VA KCGL +PSAFQI Sbjct: 507 SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 566 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 RYGGYKGVVAVDP S KLSLR+SMSK++SENTKLDVLAWSK+QPC++NRQL+TLLSTLG Sbjct: 567 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 626 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D VF+KKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL +++CGYKPD EPFLS Sbjct: 627 VKDSVFKKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLS 686 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MMLQ FRAS+LL+LRTKTRI Sbjct: 687 MMLQNFRASKLLELRTKTRI 706 >gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] Length = 1110 Score = 288 bits (737), Expect = 8e-76 Identities = 148/200 (74%), Positives = 168/200 (84%), Gaps = 4/200 (2%) Frame = -1 Query: 589 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 422 S ETLSV +DEI +IPDIE+ YVF DGIGKISA+FA+ VA KC L+ TPSAFQI Sbjct: 502 STETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQI 561 Query: 421 RYGGYKGVVAVDPKSFVKLSLRRSMSKYDSENTKLDVLAWSKFQPCFLNRQLVTLLSTLG 242 R GG+KGVVA+DP S KLSLR+SM KY+SENTKLDVLAWSK+QPCFLNRQL+TLLSTLG Sbjct: 562 RIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621 Query: 241 VGDDVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNILNEMLMCGYKPDDEPFLS 62 V D FEKKQ EV+ QL+A+L DPL AQ+ALELMS GENTNIL EML+CGYKPD EPFLS Sbjct: 622 VPDYAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLS 681 Query: 61 MMLQIFRASRLLDLRTKTRI 2 MML+ FRAS+LL+LRTK RI Sbjct: 682 MMLETFRASKLLELRTKARI 701