BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00010843
         (2383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1149   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1134   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1098   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1094   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1094   0.0  
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...  1071   0.0  
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...  1067   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1067   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1065   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1061   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1059   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1057   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1056   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1053   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1053   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1011   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...  1002   0.0  
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...   990   0.0  
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...   988   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...   986   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1149 bits (2971), Expect = 0.0
 Identities = 568/736 (77%), Positives = 636/736 (86%), Gaps = 2/736 (0%)
 Frame = -2

Query: 2202 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 2023
            DYEPLREL + HIDSFDHL+  GLE +L+++KP                           
Sbjct: 7    DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP--------------------------- 39

Query: 2022 TSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCNL 1843
             S RTMR+ LYPFECRQA+ISY+GKL+A++ FQY  G  IREKF+LGQFPIML SKLC+L
Sbjct: 40   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHL 99

Query: 1842 RGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTDK 1663
            RGADPQKL+SCKEESSEMGGYFILNGLER+VRLLILPKRNYP SMVR+SFR+RR+GYTDK
Sbjct: 100  RGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 159

Query: 1662 AVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIYLSM 1483
            AVVIRCVREDQSAV+VKLYYLRNGSARLGFWIQG+EYLLPVG+VLKALIDT +HEIY S+
Sbjct: 160  AVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESL 219

Query: 1482 TCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGLETA 1309
            TCC     EG KG+VGT+L+ ER  IIL+EV+D    TR Q L+HIG+ FQ VMDGLE  
Sbjct: 220  TCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENE 279

Query: 1308 SYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVLLPG 1129
            SYS+V +AVL++YIFVHLDNNYDKFNLLIFM QKLFS +DQTS+PDNPD LQNQEVLLPG
Sbjct: 280  SYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPG 339

Query: 1128 HLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAIENM 949
            HLI IYLKEKLQEWLYKA+RLLQDEI+ + N F+F SL  VKK++++NP+RQI  A+ENM
Sbjct: 340  HLITIYLKEKLQEWLYKARRLLQDEINKRKN-FEFSSLAHVKKVMDKNPSRQISLAVENM 398

Query: 948  LKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLLPES 769
            LKTGRLVT SGLDLQQRAGMTVQAERLNFLRF+SHFRAVHRGASF+GLRTTSVRKLLPE+
Sbjct: 399  LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEA 458

Query: 768  WGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMTPSQ 589
            WGFLCPVHTPDGEPCGLLNHM STCR++SYFDS+GN+RDFF IR+SIL VL+G+GMTP+ 
Sbjct: 459  WGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPAL 518

Query: 588  PKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVPLSI 409
            PKLV AGPPEVL V+LDGRVVGS+PSS VE  V HLRRLKV+A  VIP DLEVGY+PLS+
Sbjct: 519  PKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSM 578

Query: 408  RGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRRNTL 229
             GAYPGLYLFTS SRFVRPVRNIS+PSEE  D ELIGPFEQVYMEIRCPDG DGGRRN  
Sbjct: 579  GGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIF 638

Query: 228  PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKLYHL 49
            PATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQMGKQTM FSSQAI+CRADQKLYHL
Sbjct: 639  PATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHL 698

Query: 48   QTPQTPIVRTSAYEKH 1
            QTPQTPIVRTSAY K+
Sbjct: 699  QTPQTPIVRTSAYVKY 714


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 553/693 (79%), Positives = 620/693 (89%), Gaps = 2/693 (0%)
 Frame = -2

Query: 2073 QLRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREK 1894
            ++ +WFG+  L  P+KE S RTMR+ LYPFECRQA+ISY+GKL+A++ FQY  G  IREK
Sbjct: 16   RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREK 75

Query: 1893 FDLGQFPIMLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPT 1714
            F+LGQFPIML SKLC+LRGADPQKL+SCKEESSEMGGYFILNGLER+VRLLILPKRNYP 
Sbjct: 76   FNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPM 135

Query: 1713 SMVRSSFRERRDGYTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGL 1534
            SMVR+SFR+RR+GYTDKAVVIRCVREDQSAV+VKLYYLRNGSARLGFWIQG+EYLLPVG+
Sbjct: 136  SMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGV 195

Query: 1533 VLKALIDTNEHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQAL 1360
            VLKALIDT +HEIY S+TCC     EG KG+VGT+L+ ER  IIL+EV+D    TR Q L
Sbjct: 196  VLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCL 255

Query: 1359 EHIGKRFQPVMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTS 1180
            +HIG+ FQ VMDGLE  SYS+V +AVL++YIFVHLDNNYDKFNLLIFM QKLFS +DQTS
Sbjct: 256  QHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTS 315

Query: 1179 MPDNPDSLQNQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKK 1000
            +PDNPD LQNQEVLLPGHLI IYLKEKLQEWLYKA+RLLQDEI+ + N F+F SL  VKK
Sbjct: 316  VPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKN-FEFSSLAHVKK 374

Query: 999  ILNRNPARQICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGA 820
            ++++NP+RQI  A+ENMLKTGRLVT SGLDLQQRAGMTVQAERLNFLRF+SHFRAVHRGA
Sbjct: 375  VMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGA 434

Query: 819  SFSGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNI 640
            SF+GLRTTSVRKLLPE+WGFLCPVHTPDGEPCGLLNHM STCR++SYFDS+GN+RDFF I
Sbjct: 435  SFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKI 494

Query: 639  RLSILRVLVGVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAA 460
            R+SIL VL+G+GMTP+ PKLV AGPPEVL V+LDGRVVGS+PSS VE  V HLRRLKV+A
Sbjct: 495  RMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSA 554

Query: 459  TEVIPYDLEVGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVY 280
              VIP DLEVGY+PLS+ GAYPGLYLFTS SRFVRPVRNIS+PSEE  D ELIGPFEQVY
Sbjct: 555  ISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVY 614

Query: 279  MEIRCPDGRDGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMG 100
            MEIRCPDG DGGRRN  PATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQMGKQTM 
Sbjct: 615  MEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMA 674

Query: 99   FSSQAIHCRADQKLYHLQTPQTPIVRTSAYEKH 1
            FSSQAI+CRADQKLYHLQTPQTPIVRTSAY K+
Sbjct: 675  FSSQAINCRADQKLYHLQTPQTPIVRTSAYVKY 707


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 531/740 (71%), Positives = 627/740 (84%), Gaps = 2/740 (0%)
 Frame = -2

Query: 2214 NSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSE 2035
            N   DYE LREL + HI+SFDHL+ +GLE ++ ++KPV + D   +++LRIW GK  L  
Sbjct: 6    NENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYP 65

Query: 2034 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 1855
            P+KE ++RT+RE L P+ECRQA+ISYTGK +A++ FQYDE   IREKF+ GQFPIML SK
Sbjct: 66   PQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSK 125

Query: 1854 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 1675
            LC+LRG DP+KL+S  EE+SEMGGYF++NGLER+VRLLI PKRNYPTSMVR+SF +RR+G
Sbjct: 126  LCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 1674 YTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEI 1495
            YTDKAVVIRCVREDQS+V+VKLYYLRNGSARLGFW+QGKEYLLP+G+VLKALIDT +HEI
Sbjct: 186  YTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI 245

Query: 1494 YLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDG 1321
            Y S+T C  +     KG+VGT+L+ ER  IIL+EV+D      RQ L+HIG+ FQPVM+G
Sbjct: 246  YASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEG 305

Query: 1320 LETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEV 1141
            L    +S V +AVLKDYIFVHLDNNYDKFNLLIFMAQKLFS +DQTS+PDNPDSLQNQ+V
Sbjct: 306  LGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV 365

Query: 1140 LLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQA 961
            LLPG LI +YLKEKL++WL K K+LL+DEI N +  F+F SL  VKK++++NP++Q+  A
Sbjct: 366  LLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSA 425

Query: 960  IENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKL 781
            +ENMLKTGRLVT +GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASF+GLRTT+VRKL
Sbjct: 426  VENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKL 485

Query: 780  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGM 601
            LPESWGFLCPVHTPDGEPCGLLNH+TSTCR++S+F+SQG  RDF+ IR SIL VL+ VGM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGM 545

Query: 600  TPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYV 421
             PS PKLV  G P+ L VLLDGR+VG + S+ VEK+VAHLRRLKV +  VIP DLEVGYV
Sbjct: 546  IPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYV 605

Query: 420  PLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGR 241
            PLSI GAYPGLYLFTS SRFVRPV+N+S+  E++ + ELIGPFEQV+MEIRCPDG DGGR
Sbjct: 606  PLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 240  RNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQK 61
            ++  PATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQM KQTM FS QAI  RADQK
Sbjct: 666  KDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK 725

Query: 60   LYHLQTPQTPIVRTSAYEKH 1
            LYHLQTPQTPIVRTS Y K+
Sbjct: 726  LYHLQTPQTPIVRTSTYTKY 745


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 528/754 (70%), Positives = 627/754 (83%), Gaps = 3/754 (0%)
 Frame = -2

Query: 2253 QSEKHRNLNNMVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSR 2074
            + EK + ++     + +DY  L+EL   HI+SFD+++ +GLE +LL +KP+ + D   S 
Sbjct: 2    EEEKPKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSL 61

Query: 2073 QLRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREK 1894
            +LRIWFGK  L  P+KE + +TM + LYPFECRQA++SYTGK + ++ FQY +G  IREK
Sbjct: 62   KLRIWFGKPELFPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREK 121

Query: 1893 FDLGQFPIMLMSKLCNLRGADP-QKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYP 1717
            F+ GQFPIML SKLC+LRGAD  +KLI+ KEE SEMGGYFIL GLER++RL+ILPKRNYP
Sbjct: 122  FNFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYP 181

Query: 1716 TSMVRSSFRERRDGYTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVG 1537
            TSM R+SFR+RR+GY+DKAVVIRCVREDQSAVS+KLYYL NGSARLGFWIQG+EYLLPVG
Sbjct: 182  TSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVG 241

Query: 1536 LVLKALIDTNEHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVK--DFMTRRQA 1363
            ++LKAL+DT +HEIY+++TCC     +  KGSVGT+L+ ER  IIL+EV+     TR Q 
Sbjct: 242  IILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQC 301

Query: 1362 LEHIGKRFQPVMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQT 1183
            L HIG+ FQPV+ G++  SY  V +AVL+DYIFVHLDNN+DKFNLLIFM QKLFS +DQT
Sbjct: 302  LRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQT 361

Query: 1182 SMPDNPDSLQNQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVK 1003
            S+ DNPDSLQNQEVLLPGHLI IYLKEKLQ+WL K +R LQ+E D +  KF+  SL DVK
Sbjct: 362  SVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVK 421

Query: 1002 KILNRNPARQICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRG 823
            K + +N  +QI  AIE+MLKTGRL T SGLDLQQRAGMTVQAE+LNFLRF+SHFRAVHRG
Sbjct: 422  KAIEKNAPKQIGLAIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRG 481

Query: 822  ASFSGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFN 643
            ASF+GLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT++CR++SY+DS+GN +DFF 
Sbjct: 482  ASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFK 541

Query: 642  IRLSILRVLVGVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVA 463
            +R+SIL VL+ +GMTP  PKLV  GPPE+L VLLDGR+ G +PS  +EK V HLRRLK++
Sbjct: 542  MRMSILNVLIAIGMTPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLS 601

Query: 462  ATEVIPYDLEVGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQV 283
            +T  IP DLEVGY+PLS+ GAYPGLYLFTS SRFVRPVRNIS P+EE  D EL+GPFEQV
Sbjct: 602  STSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQV 661

Query: 282  YMEIRCPDGRDGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTM 103
            YMEI CPDG DGGR+   PATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQMGKQTM
Sbjct: 662  YMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTM 721

Query: 102  GFSSQAIHCRADQKLYHLQTPQTPIVRTSAYEKH 1
            GFSSQA++CRADQKLYHLQTPQTPIVRT AYEK+
Sbjct: 722  GFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKY 755


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1094 bits (2829), Expect = 0.0
 Identities = 528/755 (69%), Positives = 628/755 (83%), Gaps = 3/755 (0%)
 Frame = -2

Query: 2256 PQSEKHRNLNNMVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCS 2077
            P+S+  + ++     + +DY  L+EL   HI+SFD+++ +GLE +LL +KP+ + D   S
Sbjct: 6    PKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSS 65

Query: 2076 RQLRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIRE 1897
             +LRIWFGK  L  P+KE + + M + LYPFECRQA+ISY+GK + ++ FQY +G  IRE
Sbjct: 66   LKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIRE 125

Query: 1896 KFDLGQFPIMLMSKLCNLRGADP-QKLISCKEESSEMGGYFILNGLERIVRLLILPKRNY 1720
            KF+ GQFPIML SKLC+LRGAD  +KL++ KEE SEMGGYFIL GLER++RL+ILPKRNY
Sbjct: 126  KFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNY 185

Query: 1719 PTSMVRSSFRERRDGYTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPV 1540
            PTSM R+SFR+RR+GY+DKAVVIRCVREDQSAVS+KLYYL NGSARLGFWIQG+EYLLPV
Sbjct: 186  PTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPV 245

Query: 1539 GLVLKALIDTNEHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVK--DFMTRRQ 1366
            G++LKAL+DT +HEIY+++TCC     +  KGSVGT+L+ ER  IIL+EV+     TR Q
Sbjct: 246  GIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQ 305

Query: 1365 ALEHIGKRFQPVMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQ 1186
             L HIG+ FQPV+ G++  SY  V +AVL+DYIFVHLDNN+DKFNLLIFM QKLFS +DQ
Sbjct: 306  CLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQ 365

Query: 1185 TSMPDNPDSLQNQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDV 1006
            TS+ DNPDSLQNQEVLLPGHLI IYLKEKLQ+WL K +R LQ+E D +  KF+  SL DV
Sbjct: 366  TSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDV 425

Query: 1005 KKILNRNPARQICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHR 826
            KK + +N  +QI   IE+MLKTGRL T SGLDLQQRAGMTVQAE+LNFLRF+SHFRAVHR
Sbjct: 426  KKAIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHR 485

Query: 825  GASFSGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFF 646
            GASF+GLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT++CR++SY+DS+GN +DFF
Sbjct: 486  GASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFF 545

Query: 645  NIRLSILRVLVGVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKV 466
             +R+SIL VL+ +GMTPS PKLV AGPPE+L VLLDGR+ G +PS  +EK V HLRRLK+
Sbjct: 546  KMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKL 605

Query: 465  AATEVIPYDLEVGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQ 286
            ++T  IP DLEVGY+PLS+ GAYPGLYLFTS SRFVRPVRNIS P+EE  D ELIGPFEQ
Sbjct: 606  SSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQ 665

Query: 285  VYMEIRCPDGRDGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQT 106
            VYMEI CPDG DGGR+   PATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQMGKQT
Sbjct: 666  VYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQT 725

Query: 105  MGFSSQAIHCRADQKLYHLQTPQTPIVRTSAYEKH 1
            MGFSSQA++CRADQKLYHLQTPQTPIVRT AYEK+
Sbjct: 726  MGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKY 760


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like,
            partial [Cucumis sativus]
          Length = 948

 Score = 1072 bits (2771), Expect = 0.0
 Identities = 518/725 (71%), Positives = 613/725 (84%), Gaps = 2/725 (0%)
 Frame = -2

Query: 2214 NSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSE 2035
            N   DYE LREL + HI+SFDHL+ +GLE ++ ++KPV + D   +++LRIW GK  L  
Sbjct: 6    NENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYP 65

Query: 2034 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 1855
            P+KE ++RT+RE L P+ECRQA+ISYTGK +A++ FQYDE   IREK + GQFPIML SK
Sbjct: 66   PQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKLNFGQFPIMLKSK 125

Query: 1854 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 1675
            LC+LRG DP+KL+S  EE+SEMGGYF++NGLER+VRLLI PKRNYPTSMVR+SF +RR+G
Sbjct: 126  LCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 1674 YTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEI 1495
            YTDKAVVIRCVREDQS+V+VKLYYLRNGSARLGFW+QGKEYLLP+G+VLKALIDT +HEI
Sbjct: 186  YTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI 245

Query: 1494 YLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDG 1321
            Y S+T C  +     KG+VGT+L+ ER  IIL+EV+D      RQ L+HIG+ FQPVM+G
Sbjct: 246  YASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEG 305

Query: 1320 LETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEV 1141
            L    +S V +AVLKDYIFVHLDNNYDKFNLLIFMAQKLFS +DQTS+PDNPDSLQNQ+V
Sbjct: 306  LGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV 365

Query: 1140 LLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQA 961
            LLPG LI +YLKEKL++WL K K+LL+DEI N +  F+F SL  VKK++++NP++Q+  A
Sbjct: 366  LLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSA 425

Query: 960  IENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKL 781
            +ENMLKTGRLVT +GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASF+GLRTT+VRKL
Sbjct: 426  VENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKL 485

Query: 780  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGM 601
            LPESWGFLCPVHTPDGEPCGLLNH+TSTCR++S+F+SQG  RDF+ IR SIL VL+ VGM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGM 545

Query: 600  TPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYV 421
             PS PKLV  G P+ L VLLDGR+VG + S+ VEK+VAHLRRLKV +  VIP DLEVGYV
Sbjct: 546  IPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYV 605

Query: 420  PLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGR 241
            PLSI GAYPGLYLFTS SRFVRPV+N+S+  E++ + ELIGPFEQV+MEIRCPDG DGGR
Sbjct: 606  PLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 240  RNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQK 61
            ++  PATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQM KQTM FS QAI  RADQK
Sbjct: 666  KDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK 725

Query: 60   LYHLQ 46
            LYHLQ
Sbjct: 726  LYHLQ 730


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Citrus sinensis]
          Length = 954

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 524/745 (70%), Positives = 626/745 (84%), Gaps = 4/745 (0%)
 Frame = -2

Query: 2223 MVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH 2044
            M    + D+EPLRELV+ HI+SFD+++  GL ++   +K V V D   +++L+I  G   
Sbjct: 1    MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE 60

Query: 2043 LSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQY-DEGPPI-REKFDLGQFPI 1870
            +  P+KE   +T+R+ L PFECRQA+ISYTGKL+A++ FQY D G P+ RE+F+ GQFP+
Sbjct: 61   IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV 120

Query: 1869 MLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFR 1690
            ML ++ C+L+GAD QKL+S KEE++EMGGYFILNGLER+ R +ILPK+NYP SMVRSSFR
Sbjct: 121  MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR 180

Query: 1689 ERRDGYTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDT 1510
            +RR+GYTDKAVVIRCVR+DQS+V++KLYYL NGS RLGFW+QGKEYLLPVG+VLKAL+DT
Sbjct: 181  DRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDT 240

Query: 1509 NEHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDFM--TRRQALEHIGKRFQ 1336
            N+ EI+  +TCC     + +KG+VG+ L+ ER  IIL EV+D    TR Q L+HIG+ FQ
Sbjct: 241  NDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQ 300

Query: 1335 PVMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSL 1156
            PV+DGL++ SY  V E V++DYIFVHL++N DKFNLLIFM QKLFS VD TS+ DNPDSL
Sbjct: 301  PVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSL 360

Query: 1155 QNQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPAR 976
            QNQE+LLPGHLI IYLKEKL++WL K K+L+QDEI+N   KFDF +L ++KK++ +NP++
Sbjct: 361  QNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSK 420

Query: 975  QICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTT 796
            QI  +IE MLKTGRL T +GLDLQQRAG TVQAERLNFLRFIS FRAVHRGASF+GLRTT
Sbjct: 421  QIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTT 480

Query: 795  SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVL 616
            SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRV+SY+DS+GN RDF  +R SILRVL
Sbjct: 481  SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVL 540

Query: 615  VGVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDL 436
            +GVGM PS PKLV +GPP VL VLLDGRVVG +PSS +EKVVAHLRRLKV+A  VIP DL
Sbjct: 541  IGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDL 600

Query: 435  EVGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDG 256
            EVGYVPLS+ GAYPGLYLFTS  +FVRPVRNIS+PSEES++ ELIGPFEQV+MEIRCPDG
Sbjct: 601  EVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDG 660

Query: 255  RDGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHC 76
             DGGRRN  PATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQM KQTMGFS QA+  
Sbjct: 661  GDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKF 720

Query: 75   RADQKLYHLQTPQTPIVRTSAYEKH 1
            RADQKLYHLQTPQTPIVRT+ Y K+
Sbjct: 721  RADQKLYHLQTPQTPIVRTNTYTKY 745


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 524/745 (70%), Positives = 626/745 (84%), Gaps = 4/745 (0%)
 Frame = -2

Query: 2223 MVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH 2044
            M    + D+EPLRELV+ HI+SFD+++  GL ++   +K V V D   +++L+I  G   
Sbjct: 1    MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE 60

Query: 2043 LSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQY-DEGPPI-REKFDLGQFPI 1870
            +  P+KE   +T+R+ L PFECRQA+ISYTGKL+A++ FQY D G P+ RE+F+ GQFP+
Sbjct: 61   IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV 120

Query: 1869 MLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFR 1690
            ML ++ C+L+GAD QKL+S KEE++EMGGYFILNGLER+ R +ILPK+NYP SMVRSSFR
Sbjct: 121  MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR 180

Query: 1689 ERRDGYTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDT 1510
            +RR+GYTDKAVVIRCVR+DQS+V++KLYYL NGS RLGFW+QGKEYLLPVG+VLKAL+DT
Sbjct: 181  DRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDT 240

Query: 1509 NEHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDFM--TRRQALEHIGKRFQ 1336
            N+ EI+  +TCC     + +KG+VG+ L+ ER  IIL EV+D    TR Q L+HIG+ FQ
Sbjct: 241  NDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQ 300

Query: 1335 PVMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSL 1156
            PV+DGL++ SY  V E V++DYIFVHL++N DKFNLLIFM QKLFS VD TS+ DNPDSL
Sbjct: 301  PVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSL 360

Query: 1155 QNQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPAR 976
            QNQE+LLPGHLI IYLKEKL++WL K K+L+QDEI+N   KFDF +L ++KK++ +NP++
Sbjct: 361  QNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSK 420

Query: 975  QICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTT 796
            QI  +IE MLKTGRL T +GLDLQQRAG TVQAERLNFLRFIS FRAVHRGASF+GLRTT
Sbjct: 421  QIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTT 480

Query: 795  SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVL 616
            SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRV+SY+DS+GN RDF  +R SILRVL
Sbjct: 481  SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVL 540

Query: 615  VGVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDL 436
            +GVGM PS PKLV +GPP VL VLLDGRVVG +PSS +EKVVAHLRRLKV+A  VIP DL
Sbjct: 541  IGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDL 600

Query: 435  EVGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDG 256
            EVGYVPLS+ GAYPGLYLFTS  +FVRPVRNIS+PSEES++ ELIGPFEQV+MEIRCPDG
Sbjct: 601  EVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDG 660

Query: 255  RDGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHC 76
             DGGRRN  PATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQM KQTMGFS QA+  
Sbjct: 661  GDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKF 720

Query: 75   RADQKLYHLQTPQTPIVRTSAYEKH 1
            RADQKLYHLQTPQTPIVRT+ Y K+
Sbjct: 721  RADQKLYHLQTPQTPIVRTNTYTKY 745


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1065 bits (2755), Expect = 0.0
 Identities = 523/739 (70%), Positives = 618/739 (83%), Gaps = 2/739 (0%)
 Frame = -2

Query: 2211 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 2032
            S  D+E LREL K HI+SFD+++ +GL+ +L  +KPV V D   S +LRIW     L  P
Sbjct: 7    SVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPP 66

Query: 2031 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 1852
            +KE   RTMRE L PFECRQA+ISY+GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67   QKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKL 126

Query: 1851 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 1672
            CNLRGADPQKL+S KEE+SEMGGYFILNGLER+VRLLILPKRNYP SMVR+SF +RR+GY
Sbjct: 127  CNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGY 186

Query: 1671 TDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIY 1492
            TDKAVVIRCVR DQS++SV+LYYLRNGSARLGFW++G+EYLLPVG++LKALIDT + EIY
Sbjct: 187  TDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIY 246

Query: 1491 LSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGL 1318
            +++T C     E  KG+VGT+L+ ER  IIL+E++D    TR Q LE+IG+ FQPVM+ L
Sbjct: 247  VNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNEL 306

Query: 1317 ETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVL 1138
            +  SY +V +AVLKD I VHLDNN+DKFNLLIFM QKLFS +DQTS+PDNPDSLQN EVL
Sbjct: 307  KNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVL 366

Query: 1137 LPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAI 958
            LPGHLI +YLKEKL++WL K +RLL DEID ++ KFDF  ++ VKK++++N  +Q+  A+
Sbjct: 367  LPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAV 426

Query: 957  ENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLL 778
            ENMLKTGRLVT +GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASF+GLRTT+VRKLL
Sbjct: 427  ENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLL 486

Query: 777  PESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMT 598
            PESWGFLCPVHTPDGEPCGLLNHMT T R++S+FDSQGN +D+F I++SIL VL+ VGMT
Sbjct: 487  PESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMT 546

Query: 597  PSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVP 418
            PS PK+   GPPE L VLLDG VVG + SS VEKVVAH+R LKV++  VIP D+EVGYVP
Sbjct: 547  PSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVP 606

Query: 417  LSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRR 238
            LS+ GAYPGLYL TS SRFVRPVRNIS+ S+ S + ELIGPFEQV+MEIRCPDG DGGR+
Sbjct: 607  LSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRK 666

Query: 237  NTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKL 58
            ++ PATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQM KQTM FSSQ I  RADQKL
Sbjct: 667  SSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKL 726

Query: 57   YHLQTPQTPIVRTSAYEKH 1
            YHLQTPQTPIVRTS Y K+
Sbjct: 727  YHLQTPQTPIVRTSTYTKY 745


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1061 bits (2743), Expect = 0.0
 Identities = 519/739 (70%), Positives = 613/739 (82%), Gaps = 2/739 (0%)
 Frame = -2

Query: 2211 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 2032
            S  D+E LREL K HI+SFD++  +GLE +L  +KP+ V D   S +LRIW     L  P
Sbjct: 7    SIPDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPP 66

Query: 2031 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 1852
            +KE   RTMRE L PFECRQA+ISY GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67   QKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKL 126

Query: 1851 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 1672
            CNLRGADPQKL+S +EE+SEMGGYFILNGLER++RLLILPKRN+P SMVR+SF +RR+GY
Sbjct: 127  CNLRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGY 186

Query: 1671 TDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIY 1492
            TDKA+VIRCVR DQS++SV+LYYLRNGSARLGFW++G+EYLLPVG++LKALIDT + EIY
Sbjct: 187  TDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIY 246

Query: 1491 LSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGL 1318
            +++T C     E  KG+VGT+L+ ER  IIL+E++D    TR Q LE+IG+ FQPV+  L
Sbjct: 247  VNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITEL 306

Query: 1317 ETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVL 1138
            +  SY +V EAVLKD I VHLDNN+DKFNLLIFM QKLFS +DQTS+PDNPDSLQN EVL
Sbjct: 307  KNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVL 366

Query: 1137 LPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAI 958
            LPGHLI +YLKEKL++WL K KRLL DEID ++ KFDF  ++ VKK++++N  +Q+  A+
Sbjct: 367  LPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAV 426

Query: 957  ENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLL 778
            ENMLKTGRLVT +GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASF+GLRTT+VRKLL
Sbjct: 427  ENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLL 486

Query: 777  PESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMT 598
            PESWGFLCPVHTPDGEPCGLLNHMT T R++S+FDSQGN +D+F I++SIL VL+ VGMT
Sbjct: 487  PESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMT 546

Query: 597  PSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVP 418
            PS PK+   GPPE L VLLDG VVG + SS  EKVVAH+R LKV++  VIP D+EVGYVP
Sbjct: 547  PSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVP 606

Query: 417  LSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRR 238
            LS+ GAYPGLYL TS SRFVRPVRNIS+PS  S + E IGPFEQV+MEIRCPDG DGGR+
Sbjct: 607  LSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRK 666

Query: 237  NTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKL 58
            ++ PATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQM KQTM FSSQ I  RADQKL
Sbjct: 667  SSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKL 726

Query: 57   YHLQTPQTPIVRTSAYEKH 1
            YHLQTPQTPIVRTS Y K+
Sbjct: 727  YHLQTPQTPIVRTSTYTKY 745


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 515/736 (69%), Positives = 613/736 (83%), Gaps = 2/736 (0%)
 Frame = -2

Query: 2202 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 2023
            +++ LR+L+KPHI+SFDH+I +GL+ + + +KP+ V  P+    L+I      + EP+KE
Sbjct: 16   NFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQKE 75

Query: 2022 TSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCNL 1843
                  R  LYPFECRQA+ISYTG   AEL FQYD GP +REKF+ GQFPIML SKLCNL
Sbjct: 76   RGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSKLCNL 135

Query: 1842 RGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTDK 1663
            RGA P+KL+S KEE+SE+GGYFILNGLER++RLLI+PKRNYP S VRSSF ERR+GYTDK
Sbjct: 136  RGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTDK 195

Query: 1662 AVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIYLSM 1483
            AVVIRCVR DQ++VS+KLYYLRNGSARLGFWI G+EY+LPVG+VLKALIDT + EIY+++
Sbjct: 196  AVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYVNL 255

Query: 1482 TCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGLETA 1309
            T C     E  KG+VGT+L+ ER  IIL+EV+D    TR Q L++IG+ FQP++ GL+  
Sbjct: 256  TSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLKNE 315

Query: 1308 SYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVLLPG 1129
            S+ +V +AVL+DYI VHLDNN+DKFNLLIFM QKLFS +DQTS+PDNPDSLQNQEVLLPG
Sbjct: 316  SHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLLPG 375

Query: 1128 HLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAIENM 949
            HLI +YLKEKL+EWL K KRLL DEI+ +   F+F  + DVKK+L +N  + I  AIENM
Sbjct: 376  HLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIENM 435

Query: 948  LKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLLPES 769
            LKTGRLVTT+GLDL QRAG TVQAER+NFLRFISHFRAVHRG+SF+GLRTT+VRKLLPES
Sbjct: 436  LKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLPES 495

Query: 768  WGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMTPSQ 589
            WGFLCPVHTPDGEPCGLLNHMT TCRV+S++DS+GN +D+F I+LSIL +LV +GMT S 
Sbjct: 496  WGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQSL 555

Query: 588  PKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVPLSI 409
            PK+   GPPEVL VLLDG +VG +PS+ VEKVVAH+R LKV++  VIP D+EVGYVPLS+
Sbjct: 556  PKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGYVPLSM 615

Query: 408  RGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRRNTL 229
             GAYPGLYLFTS SRFVRPVRN+S+PS  + + ELIGPFEQV+MEIRCPDG DGGR++  
Sbjct: 616  GGAYPGLYLFTSPSRFVRPVRNLSIPS-TNENVELIGPFEQVFMEIRCPDGGDGGRKSPF 674

Query: 228  PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKLYHL 49
            PATHEEIHPTG+LSVV NLTPWSDHNQSPRNMYQCQM KQTMGFSSQ I  RADQKLYHL
Sbjct: 675  PATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQKLYHL 734

Query: 48   QTPQTPIVRTSAYEKH 1
            QTPQTPIVRT AY ++
Sbjct: 735  QTPQTPIVRTRAYSEY 750


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 515/739 (69%), Positives = 614/739 (83%), Gaps = 2/739 (0%)
 Frame = -2

Query: 2211 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 2032
            S  D+E LREL K HI+SFDH++ +GLE  LL +KP+ V D   + +LRIW     +  P
Sbjct: 7    SVPDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPP 66

Query: 2031 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 1852
            +KE   +TMRE L PFECRQA+ISY GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67   QKERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKL 126

Query: 1851 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 1672
            CNLRGADP+KL+SCKEE+SEMGGYFILNGLER++RLLILPKRNYP SMVRSSF +RR+GY
Sbjct: 127  CNLRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGY 186

Query: 1671 TDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIY 1492
            TDKAVVIRCVR DQS++S++LYYLRNGSARLGFW++G+EYLLPVG+VLKALIDT + EIY
Sbjct: 187  TDKAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIY 246

Query: 1491 LSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGL 1318
            +++T C        KG+VGT+L+ ER  IIL+E++D    TRRQ LE+IG+ FQP+M  L
Sbjct: 247  VNLTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPEL 306

Query: 1317 ETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVL 1138
               SY++V +AVLKD I VHLDN++DKFNLLIFM QKLFS +DQTS+PDNPDSLQN EVL
Sbjct: 307  MKDSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVL 366

Query: 1137 LPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAI 958
            LPGHLI++Y+KEKL++WL K K+LL DEI  ++NKFDF  +  VKKI+++N A+ +  ++
Sbjct: 367  LPGHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASV 426

Query: 957  ENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLL 778
            EN+LKTGRLVT +GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASF+GLRTT+VRKLL
Sbjct: 427  ENLLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLL 486

Query: 777  PESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMT 598
            PESWGFLCPVHTPDGEPCGLLNHMT TCR++S+FDSQGN +D+F I+ SI  +L+ VGMT
Sbjct: 487  PESWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMT 546

Query: 597  PSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVP 418
             S PK+   GPPE L VLLDG VVG + SS VEKVVA++R LKV++  VIP D+EVGYVP
Sbjct: 547  SSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVP 606

Query: 417  LSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRR 238
            LS+ GAYPGLYLFTS SRFVRPV+NIS+PS  S   ELIGPFEQV+MEIRC DG DGGR+
Sbjct: 607  LSMGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRK 666

Query: 237  NTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKL 58
            ++ PATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQM KQTM FSSQ I  RADQKL
Sbjct: 667  SSFPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKL 726

Query: 57   YHLQTPQTPIVRTSAYEKH 1
            YHLQTPQTPIVRTS Y K+
Sbjct: 727  YHLQTPQTPIVRTSTYTKY 745


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 515/740 (69%), Positives = 609/740 (82%), Gaps = 2/740 (0%)
 Frame = -2

Query: 2214 NSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSE 2035
            + A + E L+EL K HI+SFD++I  GL+ +L  +KPV + D S ++ LRIW     +  
Sbjct: 13   SDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYP 72

Query: 2034 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 1855
            P+K+ S +T    LYPFECRQA+ISYTG    ++ FQ+D G  +REK + G+FPIML SK
Sbjct: 73   PQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSK 132

Query: 1854 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 1675
             C LR ADP+KL++CKEES EMGGYFILNGLER+VRLLILPKRNYP S+VR+SFR+RR+G
Sbjct: 133  RCYLREADPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREG 192

Query: 1674 YTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEI 1495
            YTDKAVVIRCVR D S+V+VKLYYL NGSARLGFW+QG+EY+LPVG++LKALIDTN+ EI
Sbjct: 193  YTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREI 252

Query: 1494 YLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDG 1321
            Y  +TCC    +   KG+VGT+L+ ER  IIL+EV+     T+ Q L+HIG+ FQP+M+G
Sbjct: 253  YTKLTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEG 312

Query: 1320 LETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEV 1141
            +E+ SYS V + VL++YIFVHLD+N DKFNLLIFM QKLFS +DQTS PDN DSLQNQEV
Sbjct: 313  MESESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEV 372

Query: 1140 LLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQA 961
            LLPGHLI IYLKEKL++WL K K+L++D I+N++  FDF S+ DVKK++ +N   Q+  A
Sbjct: 373  LLPGHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAA 432

Query: 960  IENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKL 781
            IEN+LKTGRL+T +GLDLQQRAG TVQAERLN+ RF+S FR VHRGASF+GLRTTSVRKL
Sbjct: 433  IENLLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKL 492

Query: 780  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGM 601
            LPESWGFLCPVHTPDGEPCGLLNHMT TCR++SY++S GN RDFF IR+SIL VLVGVGM
Sbjct: 493  LPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGM 552

Query: 600  TPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYV 421
            T S PK+ HAGPP+VL VLLDGRVVGSLPS   EKVVAHLRRLK+AA  VIP DLEVGYV
Sbjct: 553  TTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYV 612

Query: 420  PLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGR 241
            PLS+ G YPGLYLFTS SRFVRPVRNIS+PS + +D ELIGPFEQV+MEIRCPDG +GGR
Sbjct: 613  PLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGR 672

Query: 240  RNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQK 61
             N  PATHEEI PT +LSVVANLTPWSDHNQSPRNMYQCQM KQTM FS QAI+ RADQK
Sbjct: 673  SNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQK 732

Query: 60   LYHLQTPQTPIVRTSAYEKH 1
            LYHLQTPQTPIVRT  Y K+
Sbjct: 733  LYHLQTPQTPIVRTKTYTKY 752


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 522/740 (70%), Positives = 612/740 (82%), Gaps = 3/740 (0%)
 Frame = -2

Query: 2211 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH-LSE 2035
            SA D   LREL + HI+SFD+L+++GL  +L  +KPV V +P     LRIWF     L  
Sbjct: 11   SAGDLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGR 70

Query: 2034 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 1855
            P K+ S     E LYPFECRQ RISYTGKL+A++ FQ  +  P+RE+F+ GQFPIMLMSK
Sbjct: 71   PLKDRST----EPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSK 126

Query: 1854 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 1675
             CNLRG DPQ+L+ CKEESSEMGGYFILNGLER++R +ILPKRNYP S VR+SFR+R++G
Sbjct: 127  CCNLRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEG 186

Query: 1674 YTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEI 1495
            YTDKAVVIRC R+DQS+V+VKLYYL+NGSARLG WIQGKE+LLPVGL+LKALIDT ++E+
Sbjct: 187  YTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALIDTPDNEL 246

Query: 1494 YLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDG 1321
            Y S+TCC     E  KG+VGT+L+ ER  II+ EV D    TR Q LEHIG+ FQP+M G
Sbjct: 247  YASLTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHFQPLMGG 306

Query: 1320 LETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEV 1141
            LE   YS+VG+AVLKDYIFVHLD N DKFNLLIFM QKLFS +DQTS+ DNPDSLQNQEV
Sbjct: 307  LENEPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEV 366

Query: 1140 LLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQA 961
            LLPGHLI IYLKEKL++WL + K+LLQDEI  ++N  +F S+  +KK+L++NP RQI  A
Sbjct: 367  LLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPTRQISLA 426

Query: 960  IENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKL 781
            +ENMLKTGR+ T +GLDLQQRAG +VQAERLNFLRF+SHFRAVHRGASF+GLRTTSVRKL
Sbjct: 427  VENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 486

Query: 780  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGM 601
            LPESWGFLCPVHTPDGEPCGLLNHMT TCR++SYFD+QGN RDF  +++SIL VL+ VGM
Sbjct: 487  LPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNVLIEVGM 546

Query: 600  TPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYV 421
             PS P LVHAG P  L VLLDGRVVG + S+ VEKVVAHLR+LKV+A  VIP DLEVGYV
Sbjct: 547  IPSLPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYV 606

Query: 420  PLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGR 241
            PLS+ GAYPGLYLFTS SRFVRPV+NIS+ + E ++ ELIGPFEQV+MEIRCPDGRDGGR
Sbjct: 607  PLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPDGRDGGR 666

Query: 240  RNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQK 61
            ++  PATHEEIHPTG+LSVVANLTPWS+HNQSPRNMYQCQM KQTMGFS QA+  RADQK
Sbjct: 667  KDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQK 726

Query: 60   LYHLQTPQTPIVRTSAYEKH 1
            LYHL+TPQ+PIVRT  Y  +
Sbjct: 727  LYHLKTPQSPIVRTKTYTNY 746


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 522/740 (70%), Positives = 611/740 (82%), Gaps = 3/740 (0%)
 Frame = -2

Query: 2211 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH-LSE 2035
            SA D   LREL + HIDSFD+LI +GL  +L  +KPV V +P     LRIWF     L  
Sbjct: 9    SAGDLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGR 68

Query: 2034 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 1855
            P K+ S     E LYPFECRQ RISYTGKL+A++ FQ  +  P+RE+F+ GQFPIMLMSK
Sbjct: 69   PLKDRS----SEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSK 124

Query: 1854 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 1675
             CNLRG DPQ+L+SCKEE+SEMGGYFILNGLER++R +ILPKRNYP S VR+SFR+R++G
Sbjct: 125  CCNLRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEG 184

Query: 1674 YTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEI 1495
            YTDKAVVIRC R+DQS+V+VKLYYL+NGSARLG WIQGKE+LLPVGL+LKAL+DT ++E+
Sbjct: 185  YTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTPDNEL 244

Query: 1494 YLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDG 1321
            Y S+TCC     E  KG+VGT+L+ ER  II+ EV +    TR Q LE+IG+ FQP+M G
Sbjct: 245  YASLTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQPLMSG 304

Query: 1320 LETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEV 1141
            LE  SYS+VG+AVLKDYIFVHLD N DKFNLLIFM QKLFS +DQTS+ DNPDSLQNQEV
Sbjct: 305  LENESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEV 364

Query: 1140 LLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQA 961
            LLPGHLI IYLKEKL++WL + K+LLQDEI  + N  +F S+  +KK+L++NP RQI  A
Sbjct: 365  LLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQISLA 424

Query: 960  IENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKL 781
            +ENMLKTGR+ T +GLDLQQRAG +VQAERLNFLRF+SHFRAVHRGASF+GLRTTSVRKL
Sbjct: 425  VENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 484

Query: 780  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGM 601
            LPESWGFLCPVHTPDGEPCGLLNHMT TCR++SYFD+QGN RDF  IR+SIL VL+ VGM
Sbjct: 485  LPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLIEVGM 544

Query: 600  TPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYV 421
             PS P LVH G P  L VLLDGRVVG + S+ VEKVVAHLR+LKV+A  VIP DLEVGYV
Sbjct: 545  IPSLPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYV 604

Query: 420  PLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGR 241
            PLS+ GAYPGLYLFTS SRFVRPV+NIS+ + E ++ ELIGPFEQV+MEI+CPDGRDGGR
Sbjct: 605  PLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGRDGGR 664

Query: 240  RNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQK 61
            ++  PATHEEIHPTG+LSVVANLTPWS+HNQSPRNMYQCQM KQTMGFS QA+  RADQK
Sbjct: 665  KDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQK 724

Query: 60   LYHLQTPQTPIVRTSAYEKH 1
            LYHL+TPQ+PIVRT  Y  +
Sbjct: 725  LYHLKTPQSPIVRTKTYTNY 744


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1011 bits (2614), Expect = 0.0
 Identities = 516/758 (68%), Positives = 603/758 (79%), Gaps = 8/758 (1%)
 Frame = -2

Query: 2250 SEKHRNLNNMVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQ 2071
            S K  N ++ +G    DY  L+EL + HIDSFD++I  GLE +L  +KP           
Sbjct: 5    SAKKENPSSAMG----DYSALQELTRHHIDSFDYMIERGLEIMLDNIKP----------- 49

Query: 2070 LRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKF 1891
                             S RT  ++L PFECRQA+ISYTGK  A++ F+Y     IREK+
Sbjct: 50   ----------------ESSRTKHKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKY 93

Query: 1890 DLGQFPIMLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTS 1711
            + GQ PIML S+LC+L G D Q+L+S  EES+EMGGYFILNGLER+VRLLI+PKRNYP S
Sbjct: 94   NFGQLPIMLKSRLCHLYGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMS 153

Query: 1710 MVRSSFRERRDGYTDKAVVIRCVRE------DQSAVSVKLYYLRNGSARLGFWIQGKEYL 1549
             VR SFR+RR+GYTDKAVVIRCVRE      DQS+VSVKLYYLR+GSARLGFWIQG+EYL
Sbjct: 154  TVRGSFRDRREGYTDKAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYL 213

Query: 1548 LPVGLVLKALIDTNEHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MT 1375
            LP G+VLKAL +T + EIY  +TCC     E  KG+VG++L+ ER  IIL+EV+D    T
Sbjct: 214  LPAGIVLKALAETTDREIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFT 273

Query: 1374 RRQALEHIGKRFQPVMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSF 1195
            + + L HIG+ FQPVMDGLE  ++S V  AVLKDYIFVHL+N  DKFNLLIFM QKLFS 
Sbjct: 274  QSECLRHIGEHFQPVMDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSL 333

Query: 1194 VDQTSMPDNPDSLQNQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSL 1015
            VDQTS+ DNPDSLQNQEVLLPGHL+ IYLKEKL+EWL KAK++LQ+EI  + N F+F S+
Sbjct: 334  VDQTSVVDNPDSLQNQEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIA-KNNNFNFLSV 392

Query: 1014 LDVKKILNRNPARQICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRA 835
            LDVKK++++NP+  I  A+ENMLKTGRLVT +GLDLQQRAG TVQAERLNFLRF+S FRA
Sbjct: 393  LDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRA 452

Query: 834  VHRGASFSGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSR 655
            VHRGASF+GLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMT +CR++SYFDSQG  +
Sbjct: 453  VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVK 512

Query: 654  DFFNIRLSILRVLVGVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRR 475
            DFF+IR SIL VL  +GMT S PKLV AGPP+VL VLLDGRVVGS+PSS VEKVV HLRR
Sbjct: 513  DFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRR 572

Query: 474  LKVAATEVIPYDLEVGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGP 295
            LKVAA+ VIP DLEVGYVPLS+ GA+PGLYLFTS SRF+RPV+NIS+P+ E  + ELIGP
Sbjct: 573  LKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGP 632

Query: 294  FEQVYMEIRCPDGRDGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMG 115
            FEQV+MEIRCPDG +GGR +  PATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQM 
Sbjct: 633  FEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMA 692

Query: 114  KQTMGFSSQAIHCRADQKLYHLQTPQTPIVRTSAYEKH 1
            KQTM FS Q++  RADQKLYHLQTPQTPIVRTS+Y K+
Sbjct: 693  KQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKY 730


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score = 1002 bits (2590), Expect = 0.0
 Identities = 492/715 (68%), Positives = 590/715 (82%), Gaps = 2/715 (0%)
 Frame = -2

Query: 2211 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 2032
            S  D+E LREL K HI+SFD+++ +GL+ +L  +KPV V D   S +LRIW     L  P
Sbjct: 7    SVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPP 66

Query: 2031 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 1852
            +KE   RTMRE L PFECRQA+ISY+GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67   QKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKL 126

Query: 1851 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 1672
            CNLRGADPQKL+S KEE+SEMGGYFILNGLER+VRLLILPKRNYP SMVR+SF +RR+GY
Sbjct: 127  CNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGY 186

Query: 1671 TDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIY 1492
            TDKAVVIRCVR DQS++SV+LYYLRNGSARLGFW++G+EYLLPVG++LKALIDT + EIY
Sbjct: 187  TDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIY 246

Query: 1491 LSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGL 1318
            +++T C     E  KG+VGT+L+ ER  IIL+E++D    TR Q LE+IG+ FQPVM+ L
Sbjct: 247  VNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNEL 306

Query: 1317 ETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVL 1138
            +  SY +V +AVLKD I VHLDNN+DKFNLLIFM QKLFS +DQTS+PDNPDSLQN EVL
Sbjct: 307  KNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVL 366

Query: 1137 LPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAI 958
            LPGHLI +YLKEKL++WL K +RLL DEID ++ KFDF  ++ VKK++++N  +Q+  A+
Sbjct: 367  LPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAV 426

Query: 957  ENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLL 778
            ENMLKTGRLVT +GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASF+GLRTT+VRKLL
Sbjct: 427  ENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLL 486

Query: 777  PESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMT 598
            PESWGFLCPVHTPDGEPCGLLNHMT T R++S+FDSQGN +D+F I++SIL VL+ VGMT
Sbjct: 487  PESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMT 546

Query: 597  PSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVP 418
            PS PK+   GPPE L VLLDG VVG + SS VEKVVAH+R LKV++  VIP D+EVGYVP
Sbjct: 547  PSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVP 606

Query: 417  LSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRR 238
            LS+ GAYPGLYL TS SRFVRPVRNIS+ S+ S + ELIGPFEQV+MEIRCPDG DGGR+
Sbjct: 607  LSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRK 666

Query: 237  NTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCR 73
            ++ PATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQ       + F++ +  CR
Sbjct: 667  SSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQYGKANNGIFFTNYSTSCR 721


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score =  990 bits (2559), Expect = 0.0
 Identities = 481/734 (65%), Positives = 595/734 (81%), Gaps = 3/734 (0%)
 Frame = -2

Query: 2202 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 2023
            D++ L  LV  HI+SFD++   GL+ +   +KPV V DP+   +L IW     +  P+KE
Sbjct: 15   DFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQKE 74

Query: 2022 TSVRTMR-EKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCN 1846
            +   T R E L PFECRQA+ISYTG  +A++ F+Y++G  +R+KFD GQFPIMLMSKLC+
Sbjct: 75   SFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPIMLMSKLCS 134

Query: 1845 LRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTD 1666
            L+GAD +KL+ CKE +SEMGGYFILNG+ER+ R +I PKRN+PTSM+R+SFR+R++GY+ 
Sbjct: 135  LKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGYSS 194

Query: 1665 KAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIYLS 1486
            KAVV RCVR+DQS+V+VKLYYLRNGSAR+GFWI G+EYLLPVGLVLKAL ++ + EIY S
Sbjct: 195  KAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYES 254

Query: 1485 MTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGLET 1312
            + CC         G++GT+L+ ER  IIL+EV+D    TR Q  +H+G+ FQPV+DG++ 
Sbjct: 255  LNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKK 314

Query: 1311 ASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVLLP 1132
             S S+V EAVL+DY+FVHLDN++DKFNLLIF+ QKL+S VDQTS+PDNPDSLQNQE+L+P
Sbjct: 315  ESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEILVP 374

Query: 1131 GHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAIEN 952
            GH+I IYLKEKL+EWL K K LL+DE+DN  +KF F SL DVKK++N+NP R I  +IE 
Sbjct: 375  GHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPRSIGTSIET 434

Query: 951  MLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLLPE 772
            +LKTG L T SGLDLQQRAG TVQAERLNFLRF+S FRAVHRGASF+GLRTT+VRKLLPE
Sbjct: 435  LLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPE 494

Query: 771  SWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMTPS 592
            SWGFLCPVHTPDG PCGLLNHMT T R++S FDS+GN RDF  IR S++ VL G GM PS
Sbjct: 495  SWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVLTGAGMVPS 554

Query: 591  QPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVPLS 412
             PKLV AGPP+V+ VLLDG+VVG+L S+ V KVV+++RRLKV A  VIP DLEVGYVP S
Sbjct: 555  LPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDLEVGYVPTS 614

Query: 411  IRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRRNT 232
            + G+YPGLYL +  +RF+RPV+NIS+PS+   + ELIGPFEQV+MEI CPDG +GGR N+
Sbjct: 615  MGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVFMEISCPDGGNGGRNNS 671

Query: 231  LPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKLYH 52
              ATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQM KQTM +S+QA+  RADQK+YH
Sbjct: 672  SLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIYH 731

Query: 51   LQTPQTPIVRTSAY 10
            LQTPQ+P+VRT  Y
Sbjct: 732  LQTPQSPVVRTKTY 745


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score =  988 bits (2553), Expect = 0.0
 Identities = 489/735 (66%), Positives = 594/735 (80%), Gaps = 4/735 (0%)
 Frame = -2

Query: 2202 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 2023
            D+  L  LV  HI+SFD++   GL  +   +KPV V +PS  R+L IW     +  P+KE
Sbjct: 16   DFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSPQKE 75

Query: 2022 TSVRTMR-EKLYPFECRQARISYTGKLVAELNFQYDEGP-PIREKFDLGQFPIMLMSKLC 1849
            +   T R E L+PFECRQA+ISYTG L+AE+ F+YDE    +R++++ G+FPIMLMSKLC
Sbjct: 76   SLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMSKLC 135

Query: 1848 NLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYT 1669
            +LRGAD ++L+  KE +SEMGGYFILNG+ER+ R +I PKRN+PT MVR+SF  RR+GY+
Sbjct: 136  HLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPTGMVRNSFCGRREGYS 195

Query: 1668 DKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTNEHEIYL 1489
            DKAV IRCVR+DQS+V+VKLYYLRNGSAR+GFWI  +EYLLPVG+VLKAL +TN+ EIY 
Sbjct: 196  DKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGVVLKALTETNDEEIYE 255

Query: 1488 SMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQPVMDGLE 1315
            ++TCC         G++GT+L+ ER+ IIL+EV+D    TR Q  +++G+RFQP +DGLE
Sbjct: 256  NLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGLE 315

Query: 1314 TASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQNQEVLL 1135
              SY  V EAVLK+YIFVHLDN+ DKFNLLIF+ QKLFS VDQTS+PDNPDSLQNQE+L+
Sbjct: 316  KESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEILV 375

Query: 1134 PGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQICQAIE 955
            PGHLI IYLKEKL+EWL K K L++DE  N++ KF F ++ DVKKI+N+NP R I  +IE
Sbjct: 376  PGHLITIYLKEKLEEWLRKCKSLIEDEF-NRSKKFSFETIADVKKIINKNPPRSIGMSIE 434

Query: 954  NMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTSVRKLLP 775
             +LK+GRL T SGLDLQQRAG TVQAERLNFLRF+S FRAVHRGASF+GLRTT+VRKLLP
Sbjct: 435  TLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLP 494

Query: 774  ESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLVGVGMTP 595
            ESWGFLCPVHTPDGEPCGLLNHMT TCR++S FDS GN RDF  IR S++ VLVGVGM P
Sbjct: 495  ESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIRKSVVDVLVGVGMVP 554

Query: 594  SQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLEVGYVPL 415
            S PKLV AGPP+V+ VLLDG+VVGSL S+ V +VVA+LRRLKV A  VIP DLEVGYVP 
Sbjct: 555  SLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAPSVIPEDLEVGYVPT 614

Query: 414  SIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGRDGGRRN 235
            S+ G+YPGLYL +  SRF+RPV+N SVPS+   + EL+GPFEQV+MEI CPDG +GGR N
Sbjct: 615  SMGGSYPGLYLASCPSRFIRPVKNNSVPSD---NIELVGPFEQVFMEISCPDGGNGGRNN 671

Query: 234  TLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCRADQKLY 55
            +  ATHEEIHPTGI+SVVANLTPWSDHNQSPRNMYQCQM KQTM +S+QA+  RADQK+Y
Sbjct: 672  SSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIY 731

Query: 54   HLQTPQTPIVRTSAY 10
            HLQTPQ+P+VRT  Y
Sbjct: 732  HLQTPQSPVVRTKTY 746


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score =  986 bits (2550), Expect = 0.0
 Identities = 483/741 (65%), Positives = 596/741 (80%), Gaps = 10/741 (1%)
 Frame = -2

Query: 2202 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLR-------IWFGKHH 2044
            D + L  LV  HI+SFD++   GL+ +   +KPV V DP+   +L        +W     
Sbjct: 15   DLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLENPV 74

Query: 2043 LSEPKKETSVRTMR-EKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIM 1867
            +  P+KE+   T R E L PFECRQA+ISYTG  +A++ F+Y++G  +R++FD GQFPIM
Sbjct: 75   VFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFDFGQFPIM 134

Query: 1866 LMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRE 1687
            LMSKLC+LRGAD +KL+ CKE +SEMGGYFILNG+ER+ R +I PKRN+PTSM+R+SFR+
Sbjct: 135  LMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRD 194

Query: 1686 RRDGYTDKAVVIRCVREDQSAVSVKLYYLRNGSARLGFWIQGKEYLLPVGLVLKALIDTN 1507
            R++GYT+KAVV RCVR+DQS+V+VKLYYLRNGSAR+GFWI G+EYLLPVGLVLKAL +T 
Sbjct: 195  RKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNTC 254

Query: 1506 EHEIYLSMTCCCKNIDEGKKGSVGTRLLEERTAIILEEVKDF--MTRRQALEHIGKRFQP 1333
            + EIY S+ CC         G++GT+L+ ER  IIL+EV+D    TR Q  +H+G+ FQP
Sbjct: 255  DEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKHLGQHFQP 314

Query: 1332 VMDGLETASYSLVGEAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSFVDQTSMPDNPDSLQ 1153
            V+DGLE  S+ +V EAVL+DY+FVHLDN++DKFNLLIF+ QKL+S VDQTS+PDNPDSLQ
Sbjct: 315  VLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQ 374

Query: 1152 NQEVLLPGHLIAIYLKEKLQEWLYKAKRLLQDEIDNQTNKFDFRSLLDVKKILNRNPARQ 973
            NQE+L+PGH+I IYLKEKL++WL K K LL+DE+ N ++KF F SL DVKK++N+NP R 
Sbjct: 375  NQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLINKNPPRS 434

Query: 972  ICQAIENMLKTGRLVTTSGLDLQQRAGMTVQAERLNFLRFISHFRAVHRGASFSGLRTTS 793
            I  +IE +LKTG L T SGLDLQQRAG TVQAERLNFLRF+S FRAVHRGASF+GLRTT+
Sbjct: 435  IGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTT 494

Query: 792  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSYFDSQGNSRDFFNIRLSILRVLV 613
            VRKLLPESWGFLCPVHTPDG PCGLLNHMT T R++S FDS+GN RDF  IR S++ VL 
Sbjct: 495  VRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRKSVVEVLT 554

Query: 612  GVGMTPSQPKLVHAGPPEVLFVLLDGRVVGSLPSSNVEKVVAHLRRLKVAATEVIPYDLE 433
            G GM  S PKLV AGPP+V+ VLLDG+VVG+L S+ V KVV++LRRLKV A  VIP DLE
Sbjct: 555  GAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAPSVIPEDLE 614

Query: 432  VGYVPLSIRGAYPGLYLFTSASRFVRPVRNISVPSEESRDTELIGPFEQVYMEIRCPDGR 253
            VGYVP+S+ G+YPGLYL +  +RF+RPV+NIS+PSE   + ELIGPFEQV+MEI CPDG 
Sbjct: 615  VGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSE---NIELIGPFEQVFMEISCPDGG 671

Query: 252  DGGRRNTLPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFSSQAIHCR 73
            +GGR N+ PATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQM KQTM +S+QA+  R
Sbjct: 672  NGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFR 731

Query: 72   ADQKLYHLQTPQTPIVRTSAY 10
            ADQK+YHLQTPQ+P+VRT  Y
Sbjct: 732  ADQKIYHLQTPQSPVVRTKTY 752