BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00010774
         (1750 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   430   0.0  
emb|CBI18893.3| unnamed protein product [Vitis vinifera]              430   0.0  
ref|XP_007017946.1| Pseudouridine synthase family protein, putat...   437   0.0  
ref|XP_006435287.1| hypothetical protein CICLE_v10000742mg [Citr...   448   0.0  
ref|XP_006473742.1| PREDICTED: putative tRNA pseudouridine synth...   442   0.0  
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   420   e-173
ref|XP_007222480.1| hypothetical protein PRUPE_ppa004049mg [Prun...   407   e-172
ref|XP_004238405.1| PREDICTED: putative tRNA pseudouridine synth...   401   e-163
ref|XP_006342101.1| PREDICTED: putative tRNA pseudouridine synth...   399   e-162
ref|XP_002307763.2| hypothetical protein POPTR_0005s26880g [Popu...   412   e-161
ref|XP_004292924.1| PREDICTED: putative tRNA pseudouridine synth...   392   e-161
ref|XP_004499319.1| PREDICTED: putative tRNA pseudouridine synth...   400   e-155
ref|XP_007160608.1| hypothetical protein PHAVU_001G001600g [Phas...   404   e-154
ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth...   412   e-154
ref|XP_006838680.1| hypothetical protein AMTR_s00002p00244810 [A...   376   e-150
ref|XP_007017947.1| Pseudouridine synthase family protein, putat...   302   e-150
emb|CAH67165.1| H0211B05.2 [Oryza sativa Indica Group] gi|218195...   375   e-140
gb|EEE61489.1| hypothetical protein OsJ_15774 [Oryza sativa Japo...   375   e-140
ref|XP_007017949.1| Pseudouridine synthase family protein, putat...   267   e-139
ref|XP_006307295.1| hypothetical protein CARUB_v10008914mg [Caps...   390   e-139

>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
            vinifera]
          Length = 578

 Score =  430 bits (1106), Expect(2) = 0.0
 Identities = 209/283 (73%), Positives = 235/283 (83%)
 Frame = +1

Query: 886  DSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRW 1065
            D+ I +  DGLQD   S+ FKFP EKVN+PC L+ LC+RT IY  GRYLKYSRNVSQ+RW
Sbjct: 296  DAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQTRW 355

Query: 1066 IIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQV 1245
            IIDDERMGEASVEEI+G  ILPMC GDNYKFHAAGREDI+VRMLGSGRPFLVEIQN+R V
Sbjct: 356  IIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGRPFLVEIQNSRHV 415

Query: 1246 PSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLED 1425
            PSE  +KEIE KI                 S GW+LM+EGE EKQKQYAALVWI RPL+D
Sbjct: 416  PSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQKQYAALVWIDRPLKD 475

Query: 1426 TDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGT 1605
             D++ +SSLK+ KI+QRTPIRVLHRRSPLEREKIIHWM +E+IAG+ QYFLLHLCTQAGT
Sbjct: 476  EDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKIEKIAGSSQYFLLHLCTQAGT 535

Query: 1606 YIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            YIKEFVHGDLGRT PS+GSILGCRAEI+QLDVT+VKMDCF+ E
Sbjct: 536  YIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCFLDE 578



 Score =  298 bits (762), Expect(2) = 0.0
 Identities = 159/288 (55%), Positives = 196/288 (68%), Gaps = 10/288 (3%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPA------EMQVVEDAVRQLPPHAVKELFSIGVC 209
           M  ETE    +N    V   S+A E         +M+++ DAV ++ PHAVK+L S+G+C
Sbjct: 1   MHHETEDAHASNGHEAVAKVSSAAEDRRMIAGEDDMRILNDAVSKVSPHAVKDLLSLGIC 60

Query: 210 IRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLDKHT---VGNGEDLDSLLASKESEL 380
           I CIFRL G+ GHI+SC SL  S L  V+GE TD   H    +G  ED  +  +S+ESE 
Sbjct: 61  IGCIFRLSGVRGHIFSCPSLLLSILHPVIGEPTDSSTHRYTGIGGNEDSGAAHSSQESEC 120

Query: 381 EPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVI 560
           EP+ CSICLG+LQF Y +DK  L+ KDSA+ LA SI  LVK+EG++ DNFSLEVS+PPVI
Sbjct: 121 EPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVSIPPVI 180

Query: 561 LENEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSS-FPI 737
            ENEH V LYMK+KYG+E WFQEK LS RISAKDALK S+ NPLEKLLDVKS  SS F I
Sbjct: 181 AENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGSSTFRI 240

Query: 738 RLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECT 881
           RLTY   + S   QN  ER+Q CKR+R GT+     ++GSVV G EC+
Sbjct: 241 RLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECS 288


>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  430 bits (1106), Expect(2) = 0.0
 Identities = 209/283 (73%), Positives = 235/283 (83%)
 Frame = +1

Query: 886  DSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRW 1065
            D+ I +  DGLQD   S+ FKFP EKVN+PC L+ LC+RT IY  GRYLKYSRNVSQ+RW
Sbjct: 309  DAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQTRW 368

Query: 1066 IIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQV 1245
            IIDDERMGEASVEEI+G  ILPMC GDNYKFHAAGREDI+VRMLGSGRPFLVEIQN+R V
Sbjct: 369  IIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGRPFLVEIQNSRHV 428

Query: 1246 PSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLED 1425
            PSE  +KEIE KI                 S GW+LM+EGE EKQKQYAALVWI RPL+D
Sbjct: 429  PSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQKQYAALVWIDRPLKD 488

Query: 1426 TDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGT 1605
             D++ +SSLK+ KI+QRTPIRVLHRRSPLEREKIIHWM +E+IAG+ QYFLLHLCTQAGT
Sbjct: 489  EDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKIEKIAGSSQYFLLHLCTQAGT 548

Query: 1606 YIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            YIKEFVHGDLGRT PS+GSILGCRAEI+QLDVT+VKMDCF+ E
Sbjct: 549  YIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCFLDE 591



 Score =  279 bits (714), Expect(2) = 0.0
 Identities = 152/286 (53%), Positives = 189/286 (66%), Gaps = 7/286 (2%)
 Frame = +3

Query: 45  KMPDETEAMQVNNSETKVHNSSTAGEHPA------EMQVVEDAVRQLPPHAVKELFSIGV 206
           +M  ETE    +N    V   S+A E         +M+++ DAV ++ PHAVK+L S+G+
Sbjct: 31  QMHHETEDAHASNGHEAVAKVSSAAEDRRMIAGEDDMRILNDAVSKVSPHAVKDLLSLGI 90

Query: 207 CIRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEP 386
           CI CIFRL G+ GHI+SC SL  S L  V+               D  +  +S+ESE EP
Sbjct: 91  CIGCIFRLSGVRGHIFSCPSLLLSILHPVI---------------DSGAAHSSQESECEP 135

Query: 387 IYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILE 566
           + CSICLG+LQF Y +DK  L+ KDSA+ LA SI  LVK+EG++ DNFSLEVS+PPVI E
Sbjct: 136 VICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVSIPPVIAE 195

Query: 567 NEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSS-FPIRL 743
           NEH V LYMK+KYG+E WFQEK LS RISAKDALK S+ NPLEKLLDVKS  SS F IRL
Sbjct: 196 NEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGSSTFRIRL 255

Query: 744 TYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECT 881
           TY   + S   QN  ER+Q CKR+R GT+     ++GSVV G EC+
Sbjct: 256 TYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECS 301


>ref|XP_007017946.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508723274|gb|EOY15171.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 548

 Score =  437 bits (1124), Expect(2) = 0.0
 Identities = 211/277 (76%), Positives = 238/277 (85%)
 Frame = +1

Query: 904  YFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDER 1083
            + +G+QD+  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ER
Sbjct: 272  FSNGVQDQETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEER 331

Query: 1084 MGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFV 1263
            MGEASVEEI+G+ ILP+C+GDNYKFHAAGREDIDVRMLGSGRPFL+EIQNARQVPSE+ V
Sbjct: 332  MGEASVEEIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIV 391

Query: 1264 KEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTV 1443
            KE+E+KI                GSQGW LM EGEAEKQKQY ALVWISRPLED D++T+
Sbjct: 392  KEMESKINGLENKSVGVKNLKVVGSQGWALMHEGEAEKQKQYCALVWISRPLEDEDMQTI 451

Query: 1444 SSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFV 1623
            S L + KI+QRTPIRVLHRRSPLEREKIIHWM +ERIAG+ QYFLLHLCTQAGTYIKEFV
Sbjct: 452  SLLNDMKILQRTPIRVLHRRSPLEREKIIHWMKIERIAGSSQYFLLHLCTQAGTYIKEFV 511

Query: 1624 HGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            HGDLGRT PS+GSILGCRAEI+QLDVTDVKMDCF+TE
Sbjct: 512  HGDLGRTQPSVGSILGCRAEILQLDVTDVKMDCFVTE 548



 Score =  257 bits (656), Expect(2) = 0.0
 Identities = 143/280 (51%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 227
           M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1   MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 228 LFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 407
           LFGI  HIY  +S S S L  +L E T                  S +SE+E  +CS+CL
Sbjct: 57  LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 408 GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 584
           G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99  GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 585 LYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 764
            +MK+KY +E WFQE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159 SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 765 SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECT 881
           SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+
Sbjct: 219 SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCS 258


>ref|XP_006435287.1| hypothetical protein CICLE_v10000742mg [Citrus clementina]
            gi|568839548|ref|XP_006473743.1| PREDICTED: putative tRNA
            pseudouridine synthase Pus10-like isoform X2 [Citrus
            sinensis] gi|557537409|gb|ESR48527.1| hypothetical
            protein CICLE_v10000742mg [Citrus clementina]
          Length = 557

 Score =  448 bits (1153), Expect(2) = 0.0
 Identities = 219/286 (76%), Positives = 247/286 (86%)
 Frame = +1

Query: 877  VPMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQ 1056
            +P+D   E+  +GLQD  PSE  +FP +KVNEPCRL  LC RTPIYF GRYLKYSRNVSQ
Sbjct: 275  IPVD---EKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQ 331

Query: 1057 SRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNA 1236
            +RWIID+ERMGEAS+EEI+G  ILPMCRGD+YKFHAAGREDIDVRMLGSGRPFL EIQNA
Sbjct: 332  TRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNA 391

Query: 1237 RQVPSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRP 1416
            R+VPSE+ VKEIE+KI                GSQGWTLMREGEAEKQKQYAALVWISRP
Sbjct: 392  REVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRP 451

Query: 1417 LEDTDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQ 1596
            L+D D +T+SSLKET+I+Q+TPIRVLHRRSPLEREKII+WM +E+IAG+ QYFLLH+CTQ
Sbjct: 452  LQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQ 511

Query: 1597 AGTYIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            AGTYIKEFVHGDLGRT PSIGSILGCRAEI+QLDVTDVKM+CF+TE
Sbjct: 512  AGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557



 Score =  223 bits (568), Expect(2) = 0.0
 Identities = 126/282 (44%), Positives = 176/282 (62%), Gaps = 6/282 (2%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPAEM----QVVEDAVRQLPPHAVKELFSIGVCIR 215
           M +ETE    N++      S+    +P +     +++ DAV+ LP  AVK+L S  VC+R
Sbjct: 1   MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 216 CIFRLFGICGHIYSCTSLSPSSL-CVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 392
           CIFRLFG+   +  C+SLS  SL C VLGE  DL ++                S +EP  
Sbjct: 61  CIFRLFGM--QVPICSSLSVKSLLCHVLGEQADLHQNI---------------SSVEPNI 103

Query: 393 CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 572
           C  CLGILQF YC DK  ++  +SA   A +I ELVK+EG+Q+D+FSLEVS+PP ILENE
Sbjct: 104 CRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENE 163

Query: 573 HAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 752
           + + LY+KRKY +E WF+++ +S   S KDALK+++ NPLE LLDVK  +S+F IRLTY+
Sbjct: 164 NKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS 223

Query: 753 HTKTSKMVQNFVERNQSCKRKRQGTDGTLD-ILNGSVVPGTE 875
             + S  +QNFVE+ + CKR++      LD + + S + G E
Sbjct: 224 RVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVE 265


>ref|XP_006473742.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like isoform X1
            [Citrus sinensis]
          Length = 561

 Score =  442 bits (1138), Expect(2) = 0.0
 Identities = 219/290 (75%), Positives = 247/290 (85%), Gaps = 4/290 (1%)
 Frame = +1

Query: 877  VPMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQ 1056
            +P+D   E+  +GLQD  PSE  +FP +KVNEPCRL  LC RTPIYF GRYLKYSRNVSQ
Sbjct: 275  IPVD---EKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQ 331

Query: 1057 SRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNA 1236
            +RWIID+ERMGEAS+EEI+G  ILPMCRGD+YKFHAAGREDIDVRMLGSGRPFL EIQNA
Sbjct: 332  TRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNA 391

Query: 1237 RQVPSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRP 1416
            R+VPSE+ VKEIE+KI                GSQGWTLMREGEAEKQKQYAALVWISRP
Sbjct: 392  REVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRP 451

Query: 1417 LEDTDIKTVSSLKET----KIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLH 1584
            L+D D +T+SSLKET    +I+Q+TPIRVLHRRSPLEREKII+WM +E+IAG+ QYFLLH
Sbjct: 452  LQDEDFQTISSLKETVRCYQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLH 511

Query: 1585 LCTQAGTYIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            +CTQAGTYIKEFVHGDLGRT PSIGSILGCRAEI+QLDVTDVKM+CF+TE
Sbjct: 512  MCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 561



 Score =  223 bits (568), Expect(2) = 0.0
 Identities = 126/282 (44%), Positives = 176/282 (62%), Gaps = 6/282 (2%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPAEM----QVVEDAVRQLPPHAVKELFSIGVCIR 215
           M +ETE    N++      S+    +P +     +++ DAV+ LP  AVK+L S  VC+R
Sbjct: 1   MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 216 CIFRLFGICGHIYSCTSLSPSSL-CVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 392
           CIFRLFG+   +  C+SLS  SL C VLGE  DL ++                S +EP  
Sbjct: 61  CIFRLFGM--QVPICSSLSVKSLLCHVLGEQADLHQNI---------------SSVEPNI 103

Query: 393 CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 572
           C  CLGILQF YC DK  ++  +SA   A +I ELVK+EG+Q+D+FSLEVS+PP ILENE
Sbjct: 104 CRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENE 163

Query: 573 HAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 752
           + + LY+KRKY +E WF+++ +S   S KDALK+++ NPLE LLDVK  +S+F IRLTY+
Sbjct: 164 NKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS 223

Query: 753 HTKTSKMVQNFVERNQSCKRKRQGTDGTLD-ILNGSVVPGTE 875
             + S  +QNFVE+ + CKR++      LD + + S + G E
Sbjct: 224 RVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVE 265


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
            gi|223551325|gb|EEF52811.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 565

 Score =  420 bits (1080), Expect(2) = e-173
 Identities = 205/284 (72%), Positives = 235/284 (82%)
 Frame = +1

Query: 883  MDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSR 1062
            +DSS E  F GL++   SE   FP EKV EPC L  LC+RTPIYF GRYLK+SRNVSQ+R
Sbjct: 284  IDSS-ESSFCGLENHESSECI-FPKEKVKEPCNLLFLCYRTPIYFGGRYLKFSRNVSQTR 341

Query: 1063 WIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQ 1242
            WIIDDERMGEAS+EEI+G +I PMC+GD+YKFHAAGREDIDVRMLGSGRPFLVEIQN RQ
Sbjct: 342  WIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNPRQ 401

Query: 1243 VPSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLE 1422
            +PSE  V+EIE KI                 +  WTLM EGEAEKQKQY ALVWISRPLE
Sbjct: 402  LPSETLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMHEGEAEKQKQYCALVWISRPLE 461

Query: 1423 DTDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAG 1602
            D D+++++SLK+ +I+QRTP+RVLHRRSPLER+KIIHWM +ER+ G+CQYFLLHLCTQAG
Sbjct: 462  DQDLQSIASLKDMQILQRTPVRVLHRRSPLERQKIIHWMKIERLTGSCQYFLLHLCTQAG 521

Query: 1603 TYIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            TYIKEFVHGDLGRT PSIGSILGCRAEI+QLDVT+VKMDCF+ E
Sbjct: 522  TYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTEVKMDCFLAE 565



 Score =  216 bits (550), Expect(2) = e-173
 Identities = 114/244 (46%), Positives = 158/244 (64%)
 Frame = +3

Query: 132 EMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTD 311
           +M++  +AVR LP HAVK L   G+C+RCIFRL G+ GHI+    LS S +  +LGE   
Sbjct: 34  DMRLFNEAVRSLPSHAVKGLLRNGICMRCIFRLLGVQGHIFFTYPLSRSLMHNILGESWK 93

Query: 312 LDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIV 491
            D       ED+       ES ++   C++CLGILQF++ +DKG L+ K +A  L  SI 
Sbjct: 94  DD-------EDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIA 146

Query: 492 ELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALK 671
           EL+KQEG+Q+D+FSLEVS+ P+I ENE  + LYM+RKY +E WFQE  +S+ I  K+ALK
Sbjct: 147 ELIKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSELWFQES-VSKCICTKEALK 205

Query: 672 YSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILN 851
           ++I NPLE++LDVKS  SS  IRLTYT  K S +  N V   + CKR++ G     + +N
Sbjct: 206 FAIANPLERMLDVKSGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPESVN 265

Query: 852 GSVV 863
             ++
Sbjct: 266 NELI 269


>ref|XP_007222480.1| hypothetical protein PRUPE_ppa004049mg [Prunus persica]
            gi|462419416|gb|EMJ23679.1| hypothetical protein
            PRUPE_ppa004049mg [Prunus persica]
          Length = 533

 Score =  407 bits (1045), Expect(2) = e-172
 Identities = 202/280 (72%), Positives = 226/280 (80%)
 Frame = +1

Query: 895  IERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIID 1074
            +E  F  LQ    SE  K P  + NEPC L  LC+RT IY  GRYLKYSRNVSQ+ WIID
Sbjct: 254  VEGSFVSLQANELSECLKLPLGQSNEPCCLEFLCYRTQIYVGGRYLKYSRNVSQTCWIID 313

Query: 1075 DERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSE 1254
            DERMGEASVEEILG+ ILP+CRGDNYKFHAAGREDIDVRMLGSGRPFL+EIQNAR +PSE
Sbjct: 314  DERMGEASVEEILGSNILPLCRGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARNIPSE 373

Query: 1255 VFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDI 1434
              VK +E KI                GSQ W LMREGEAEKQKQY ALVWISRPL+D D+
Sbjct: 374  ESVKFLETKINNLEKKLVGVKNLKLVGSQSWELMREGEAEKQKQYTALVWISRPLKDEDL 433

Query: 1435 KTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIK 1614
            +++SSL++  I+QRTPIRVLHRRSPLEREKIIHWM +ERI G+ QYFLLHLCTQAGTYIK
Sbjct: 434  QSISSLEDMHILQRTPIRVLHRRSPLEREKIIHWMRIERIVGSSQYFLLHLCTQAGTYIK 493

Query: 1615 EFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            EF+HGDLGRT PSIGSIL CRAEI++LDVTDVKM+CF+TE
Sbjct: 494  EFIHGDLGRTQPSIGSILTCRAEILRLDVTDVKMECFLTE 533



 Score =  227 bits (578), Expect(2) = e-172
 Identities = 121/215 (56%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
 Frame = +3

Query: 150 DAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTV 329
           D VR+LP  AV +L SIGVC RCI RLFGI  H+Y  +SLSPS L  VLG+ T  +KH V
Sbjct: 23  DVVRELPIRAVIDLLSIGVCTRCILRLFGIREHVYYRSSLSPSMLSSVLGDSTCSEKHMV 82

Query: 330 -GNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQ 506
            GN  +L             + CSICLGILQF Y  DK  +  K+SAN LA SI  L++Q
Sbjct: 83  DGNFREL-------------VVCSICLGILQFTYWEDKKLVTEKESANELAVSISSLIRQ 129

Query: 507 EGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVN 686
           +G+++D+FSLEVS+PP++LEN+H VWLYMKRKY +E WFQ K +S  ISAKDALK S++ 
Sbjct: 130 QGFEIDSFSLEVSIPPIVLENDHTVWLYMKRKYESELWFQGKSISECISAKDALKISLME 189

Query: 687 PLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVE 791
            LE +L  KS MS+F IRLTYTH  +SK V+N VE
Sbjct: 190 SLETMLGCKSNMSAFRIRLTYTHRISSKTVENSVE 224


>ref|XP_004238405.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Solanum
            lycopersicum]
          Length = 557

 Score =  401 bits (1030), Expect(2) = e-163
 Identities = 195/259 (75%), Positives = 216/259 (83%)
 Frame = +1

Query: 958  EKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMC 1137
            +KV +PC L+I C R+  Y  GRYLKYSRNVSQ+RW+IDDERMGEASVEEI+G  ILP+ 
Sbjct: 299  DKVGKPCSLAIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIIGGAILPIF 358

Query: 1138 RGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKIXXXXXXXXXXX 1317
            +GDNYKFHAAGREDIDVRMLG+GRPFLVEIQNARQVPSE  +KEIE KI           
Sbjct: 359  QGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEKKINSLESQYVRVK 418

Query: 1318 XXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTVSSLKETKIMQRTPIRVLH 1497
                 GSQGW LMREGEAEKQKQYAALVWISRP+ D D++T+SSLKE K+ Q+TPIRVLH
Sbjct: 419  NLRAVGSQGWDLMREGEAEKQKQYAALVWISRPVSDEDLQTISSLKELKVAQKTPIRVLH 478

Query: 1498 RRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFVHGDLGRTIPSIGSILGCR 1677
            RRSPLEREKIIHWM VER++G+ QY LLHLCTQAGTYIKEFVHGD GRT PSIGSILGCR
Sbjct: 479  RRSPLEREKIIHWMQVERVSGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCR 538

Query: 1678 AEIVQLDVTDVKMDCFMTE 1734
             EI+QLDVTDVKMDCF  E
Sbjct: 539  TEILQLDVTDVKMDCFQEE 557



 Score =  204 bits (518), Expect(2) = e-163
 Identities = 116/258 (44%), Positives = 158/258 (61%)
 Frame = +3

Query: 102 NSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSS 281
           +S+ A     +++++ +AV  LP  AVK+L+SIG C+RCIFRLFG+   + S  SLS S 
Sbjct: 17  SSAEAAAEEEKLRLLREAVHALPVSAVKDLWSIGACVRCIFRLFGLHELMCSHPSLSISK 76

Query: 282 LCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKD 461
            C +L ++       + N +   +  + +E   E  +C ICLGILQF+Y +D GTL+ K 
Sbjct: 77  WCDILEDV-------MRNKDGEFNEQSHQERSRETNFCKICLGILQFLYYDDTGTLLKKY 129

Query: 462 SANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLS 641
           SA+  A  I ELVKQ+  Q+D+FSLEVSLP V+ EN+ AVWLYMK KY  E WFQEK   
Sbjct: 130 SADDFAVVISELVKQQYQQIDSFSLEVSLPSVVTENDQAVWLYMKNKYRHELWFQEKAEC 189

Query: 642 RRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQ 821
           + IS KD  K  ++NPL++LL VKS  SSF +RLTY+H+       +  E N   KR++ 
Sbjct: 190 QFISTKDIFKLLVINPLQRLLGVKSTQSSFRVRLTYSHSDALTR-DDVQEGNGGNKRRKT 248

Query: 822 GTDGTLDILNGSVVPGTE 875
           G  G L     SV P  E
Sbjct: 249 GFTGDLKTTGESVTPHVE 266


>ref|XP_006342101.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Solanum
            tuberosum]
          Length = 560

 Score =  399 bits (1024), Expect(2) = e-162
 Identities = 194/259 (74%), Positives = 215/259 (83%)
 Frame = +1

Query: 958  EKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMC 1137
            +KV +PC L+I C R+  Y  GRYLKYSRNVSQ+RW+IDDERMGEASVEEI+G  ILP+ 
Sbjct: 302  DKVGKPCCLTIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIIGGAILPIF 361

Query: 1138 RGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKIXXXXXXXXXXX 1317
            +GDNYKFHAAGREDIDVRMLG+GRPFLVEIQNARQVPSE  +KEIE KI           
Sbjct: 362  QGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIERKINSLESHYVRVK 421

Query: 1318 XXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTVSSLKETKIMQRTPIRVLH 1497
                 G QGW LMREGEAEKQKQYAALVWISRP+ D D++T+SSLKE K+ Q+TPIRVLH
Sbjct: 422  NLRAVGIQGWDLMREGEAEKQKQYAALVWISRPVSDEDLQTISSLKELKVAQKTPIRVLH 481

Query: 1498 RRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFVHGDLGRTIPSIGSILGCR 1677
            RRSPLEREKIIHWM  ER++G+ QYFLLHLCTQAGTYIKEFVHGD GRT PSIGSILGCR
Sbjct: 482  RRSPLEREKIIHWMQAERVSGSSQYFLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCR 541

Query: 1678 AEIVQLDVTDVKMDCFMTE 1734
             EI+QLDVTDVKMDCF  E
Sbjct: 542  TEILQLDVTDVKMDCFQEE 560



 Score =  201 bits (511), Expect(2) = e-162
 Identities = 123/284 (43%), Positives = 167/284 (58%), Gaps = 2/284 (0%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 227
           M  E  A +V     K  +S+ A     +++++ +AV  LP +AVK+L+SIG C+RCIFR
Sbjct: 1   MAGEVAAAEVTG--VKHLSSAEAAAEEEKLRLLREAVHALPVNAVKDLWSIGACVRCIFR 58

Query: 228 LFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 407
           LFG+   + S  SLS S  C +L    D+ +   G   +      S+E+     +C ICL
Sbjct: 59  LFGLHELMCSHPSLSISKWCDIL---EDVMRKKDGEFNEQSHQERSRETN----FCKICL 111

Query: 408 GILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWL 587
           GILQF+Y +D GTL+ K SA+  A  I ELVKQ+  Q+D+FSLEVSLP  + EN+ AVWL
Sbjct: 112 GILQFLYYDDTGTLLKKYSADDFAVVISELVKQQYQQIDSFSLEVSLPSSVTENDQAVWL 171

Query: 588 YMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTK-- 761
           YMK K+  E WFQEK   + IS KD LK  ++NPL++LL VKS  SSF +RLTY+H+   
Sbjct: 172 YMKNKFRHELWFQEKAECQFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDAL 231

Query: 762 TSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECTHGFI 893
           T   VQ+    N+  K  + G  G L     SV P  E +   I
Sbjct: 232 TRDDVQDGNGGNKRRKTDKAGFTGDLKTTGESVTPHVESSDNHI 275


>ref|XP_002307763.2| hypothetical protein POPTR_0005s26880g [Populus trichocarpa]
            gi|550339817|gb|EEE94759.2| hypothetical protein
            POPTR_0005s26880g [Populus trichocarpa]
          Length = 520

 Score =  412 bits (1058), Expect(2) = e-161
 Identities = 199/274 (72%), Positives = 226/274 (82%)
 Frame = +1

Query: 913  GLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGE 1092
            GL +   SE   FP E+VNEPC L  LC+RTPIYF GRYLK+SRNVSQ+RWIIDDERMGE
Sbjct: 247  GLAEHESSECSNFPLERVNEPCHLVFLCYRTPIYFGGRYLKFSRNVSQTRWIIDDERMGE 306

Query: 1093 ASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFVKEI 1272
            AS+EEI+G  ILPMC+GD+YKFHAAGREDIDVRMLGSGRPFLVE+QNAR+VPSE  VKEI
Sbjct: 307  ASIEEIIGGNILPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEVQNAREVPSEALVKEI 366

Query: 1273 EAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTVSSL 1452
            E ++                 S  W LMREGEAEKQKQY+ALVWISRPLED D++ ++S 
Sbjct: 367  ETRMNNLGNKLVGVKNLSLVTSHSWDLMREGEAEKQKQYSALVWISRPLEDEDLQCIASH 426

Query: 1453 KETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFVHGD 1632
            K+ +I+QRTP+RVLHRRSPLER KIIHWM +E+I G+ QYFLLHLCTQAGTYIKEFVHGD
Sbjct: 427  KDLQILQRTPVRVLHRRSPLERGKIIHWMKIEQITGSSQYFLLHLCTQAGTYIKEFVHGD 486

Query: 1633 LGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMTE 1734
            LGRT PSIGSIL CRAEI+QLDVTDVKMDCF+ E
Sbjct: 487  LGRTHPSIGSILRCRAEILQLDVTDVKMDCFLAE 520



 Score =  186 bits (473), Expect(2) = e-161
 Identities = 122/283 (43%), Positives = 156/283 (55%), Gaps = 6/283 (2%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPA-----EMQVVEDAVRQLPPHAVKELFSIGVCI 212
           M  ETEA Q +N    V   S   +H       E + + DAVR LP HAVK+L S G   
Sbjct: 1   MSSETEAAQFSNGTDAVQVISPNDDHRVTPGDDERRHLNDAVRSLPSHAVKDLLSAG--- 57

Query: 213 RCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 392
                                                  G+    +S+    ESEL+P  
Sbjct: 58  ---------------------------------------GDSSSSESM----ESELKPEV 74

Query: 393 CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 572
           C ICLGILQF+Y ++K  L+ + + + LAASI EL++QEG+Q+D FSLEVS+PP+I ENE
Sbjct: 75  CRICLGILQFIYRDEKEMLVKRKNGDELAASIAELIRQEGHQIDGFSLEVSIPPIIFENE 134

Query: 573 HAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 752
            AV LYMK+KYG+E WFQE+ LS  IS KDALK++IVNPLE +LDVKS  S   IRLTYT
Sbjct: 135 QAVRLYMKKKYGSELWFQER-LSECISTKDALKFAIVNPLEIILDVKSGPSYVRIRLTYT 193

Query: 753 HTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVV-PGTEC 878
            TK S +    V+RN        GT+  LD ++  +V  GT C
Sbjct: 194 ETKPSIIPSKSVDRN-------GGTNNGLDTVHVELVGNGTGC 229


>ref|XP_004292924.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Fragaria
            vesca subsp. vesca]
          Length = 528

 Score =  392 bits (1007), Expect(2) = e-161
 Identities = 192/263 (73%), Positives = 216/263 (82%)
 Frame = +1

Query: 946  KFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTI 1125
            KF  E+ NEPC L  LC+RT IYF GRYLKYSRNVSQS WIIDDERMGEASVEEI+G+ I
Sbjct: 266  KFRMEQTNEPCCLEFLCYRTQIYFGGRYLKYSRNVSQSCWIIDDERMGEASVEEIIGSNI 325

Query: 1126 LPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKIXXXXXXX 1305
            LP+CRGD YKFHAAGREDIDVRMLGSGRPFLVE+QNAR VPS+  VK+++AKI       
Sbjct: 326  LPICRGDKYKFHAAGREDIDVRMLGSGRPFLVEVQNARYVPSQESVKDLQAKINNLQNKL 385

Query: 1306 XXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTVSSLKETKIMQRTPI 1485
                     GSQ W LMREGEAEKQKQY ALVW SR L+D D +++SS+K+  I+QRTPI
Sbjct: 386  VGVKNLKLVGSQSWDLMREGEAEKQKQYTALVWTSRILKDEDFQSISSVKDMHILQRTPI 445

Query: 1486 RVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFVHGDLGRTIPSIGSI 1665
            RVLHRRSPLER++IIHWM +ERI G+ QYFLLHLCTQAGTYIKEFVHGDLGRT P  GSI
Sbjct: 446  RVLHRRSPLERKRIIHWMRIERIVGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPCFGSI 505

Query: 1666 LGCRAEIVQLDVTDVKMDCFMTE 1734
            L  RAEI++LDVTDVKMDCF+TE
Sbjct: 506  LDTRAEILRLDVTDVKMDCFLTE 528



 Score =  206 bits (523), Expect(2) = e-161
 Identities = 110/246 (44%), Positives = 156/246 (63%)
 Frame = +3

Query: 90  TKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSL 269
           T++  +S A  +  +++ + DAVR LP HAV ELFSIGVC RCI RLFG+ G ++  + L
Sbjct: 3   TEIEAASPATVNGDDVRALYDAVRALPSHAVIELFSIGVCTRCILRLFGVSGSVHYHSPL 62

Query: 270 SPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTL 449
           S S L  V  + TDLD               ++ S  EP+ C +CLGILQF Y  DK  +
Sbjct: 63  SQSMLSSVFSDSTDLD---------------NRSSLREPVVCRLCLGILQFTYSEDK-KV 106

Query: 450 INKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQE 629
           + K+S  GLAA I  L++++G+++D+FSLEVS+PPV+LENE  VW ++K K+ +E   QE
Sbjct: 107 VKKESVEGLAAYICNLIREQGFEIDSFSLEVSIPPVVLENERIVWDHLKTKFESELQLQE 166

Query: 630 KLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCK 809
           + L   IS KDALK S+   LE +LD +S   +F IRLTYT+  +S+ V+N V+     K
Sbjct: 167 RSLPECISVKDALKVSLTETLETMLDCRSSTGTFRIRLTYTYPVSSETVENSVDGCHGSK 226

Query: 810 RKRQGT 827
           R++ GT
Sbjct: 227 RRKTGT 232


>ref|XP_004499319.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like isoform X1
            [Cicer arietinum] gi|502126472|ref|XP_004499320.1|
            PREDICTED: putative tRNA pseudouridine synthase
            Pus10-like isoform X2 [Cicer arietinum]
          Length = 508

 Score =  400 bits (1029), Expect(2) = e-155
 Identities = 195/266 (73%), Positives = 220/266 (82%)
 Frame = +1

Query: 934  SEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEIL 1113
            S+  KF  E  NEPC  +  C+RTP YF GRYLKYSRNVSQ+RWIIDDERMGEASVEEI+
Sbjct: 243  SDCCKFMLEMPNEPCHFAYSCYRTPFYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEII 302

Query: 1114 GNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKIXXX 1293
            G  IL  C+ D++KFHAAGREDIDVRMLG GRPFLVE+QNARQVPSE+ VK+IE KI   
Sbjct: 303  GGNILQACQADSFKFHAAGREDIDVRMLGPGRPFLVEVQNARQVPSELSVKDIEKKINTM 362

Query: 1294 XXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTVSSLKETKIMQ 1473
                         GS GW LMREGEAEKQKQYAALVWISRPL+D D++ VSSLK+ K++Q
Sbjct: 363  ENKLVRVKNLKLVGSHGWDLMREGEAEKQKQYAALVWISRPLKDEDLQHVSSLKDLKVLQ 422

Query: 1474 RTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFVHGDLGRTIPS 1653
            RTP+RVLHRRSPLEREKIIHWM +E IA + QYFLLHLCTQAGTYIKEFVHGDLGRT PS
Sbjct: 423  RTPVRVLHRRSPLEREKIIHWMKIETIAESSQYFLLHLCTQAGTYIKEFVHGDLGRTHPS 482

Query: 1654 IGSILGCRAEIVQLDVTDVKMDCFMT 1731
            IGS+LGCRAEI+QLDVTD+KM+CF+T
Sbjct: 483  IGSMLGCRAEILQLDVTDIKMECFLT 508



 Score =  176 bits (446), Expect(2) = e-155
 Identities = 99/229 (43%), Positives = 140/229 (61%)
 Frame = +3

Query: 138 QVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLD 317
           + +E+ V+ LP  AV  L S+G+C+RCIFR+FGI G +Y+  SLSPS     + +L    
Sbjct: 22  KTLEEVVQALPSDAVNHLVSLGICVRCIFRVFGIEGRVYASPSLSPSVFASAVEQLPP-- 79

Query: 318 KHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVEL 497
             T  N  +   L            C++CLGILQF + +  GT++  D    L   I ++
Sbjct: 80  --TEDNNNNKHQL------------CTLCLGILQFTFRDHDGTILRNDD---LPLLISDM 122

Query: 498 VKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYS 677
           VK++GY  D FSLEVS+PP+IL N++++  YMK KYG++ WFQE    R IS KDALK+S
Sbjct: 123 VKRDGYHSDTFSLEVSIPPIILHNDNSLRSYMKIKYGSQPWFQE----RCISTKDALKFS 178

Query: 678 IVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQG 824
           + +PL+ LL+ KS M SF IRLTYT    SK     ++  +SCKR++ G
Sbjct: 179 LQHPLQNLLECKSTMGSFRIRLTYT---ASKDADKCLDNAESCKRRKTG 224


>ref|XP_007160608.1| hypothetical protein PHAVU_001G001600g [Phaseolus vulgaris]
            gi|561034072|gb|ESW32602.1| hypothetical protein
            PHAVU_001G001600g [Phaseolus vulgaris]
          Length = 503

 Score =  404 bits (1038), Expect(2) = e-154
 Identities = 196/278 (70%), Positives = 225/278 (80%)
 Frame = +1

Query: 898  ERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDD 1077
            ER F    +   S+  +F  EK NEPC  +  C+RTP+YF GRYLKYSRNVSQ+ WIIDD
Sbjct: 226  ERPFSNSLENDFSDCGEFLLEKPNEPCHFAFFCYRTPLYFGGRYLKYSRNVSQTCWIIDD 285

Query: 1078 ERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEV 1257
            ERMGEASVEEI+G  IL  C+GD++KFHAAGREDIDVRMLG GRPFLVE+QNAR +PSE+
Sbjct: 286  ERMGEASVEEIIGGNILQSCQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNARHIPSEL 345

Query: 1258 FVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIK 1437
            FVK++E KI                GS GW LMREGEAEKQKQYAALVWISRPL+D D +
Sbjct: 346  FVKDVEKKINNMEKKLVRVKNLKLVGSDGWDLMREGEAEKQKQYAALVWISRPLKDEDFQ 405

Query: 1438 TVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKE 1617
             +SS K+ K++QRTPIRVLHRRSPL+REKIIHWM +E IAG+ QYFLLHLCTQAGTYIKE
Sbjct: 406  CISSHKDLKLLQRTPIRVLHRRSPLDREKIIHWMKIEAIAGSSQYFLLHLCTQAGTYIKE 465

Query: 1618 FVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMT 1731
            FVHGDLGRT PSIGSILGCRAEI+QLDVTD+KM+CF+T
Sbjct: 466  FVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT 503



 Score =  171 bits (433), Expect(2) = e-154
 Identities = 106/247 (42%), Positives = 141/247 (57%), Gaps = 1/247 (0%)
 Frame = +3

Query: 87  ETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTS 266
           ET    S    EH  E +   ++V+ LP  AVKEL S GVC RCIFRLFG+ G +Y+   
Sbjct: 8   ETVKRLSGEEEEHKLESE--SESVQALPSDAVKELLSEGVCARCIFRLFGLHGRVYA--- 62

Query: 267 LSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFV-YCNDKG 443
            SP SL                      S L+    +L    C++C GILQF  Y +D  
Sbjct: 63  -SPPSL----------------------SSLSPTTHQL----CTLCFGILQFTCYSDDTQ 95

Query: 444 TLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWF 623
           TL+     + L   I + VK+  YQ + FSLEVS+PP+IL N++++  YMK K+G++ WF
Sbjct: 96  TLLQN---HNLPLLIADTVKRHAYQFNTFSLEVSIPPIILHNDNSLRSYMKTKFGSQPWF 152

Query: 624 QEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQS 803
           QE L +  IS KDALK+S++ PLE LL+ KS M  F IRLTYTH K SK  Q   +  Q+
Sbjct: 153 QENLHTGCISTKDALKFSLIYPLENLLECKSSMGDFRIRLTYTHPKASKGDQKGSDSAQT 212

Query: 804 CKRKRQG 824
           CKR++ G
Sbjct: 213 CKRRKIG 219


>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
            max]
          Length = 484

 Score =  412 bits (1058), Expect(2) = e-154
 Identities = 201/278 (72%), Positives = 224/278 (80%)
 Frame = +1

Query: 898  ERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDD 1077
            ER F    +   S+  KF  EK NEPC  +  C+RTP YF GRYLKYSRNVSQ+RWIIDD
Sbjct: 207  ERSFSSTLENDSSDCCKFLLEKANEPCHFTYSCYRTPFYFGGRYLKYSRNVSQTRWIIDD 266

Query: 1078 ERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEV 1257
            ERMGEASVEEI+G  IL  C+GD++KFHAAGREDIDVRMLG GRPFLVE+QN R +PSE+
Sbjct: 267  ERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNGRHIPSEL 326

Query: 1258 FVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIK 1437
            FVK+IE  I                GS GW LMREGEAEKQKQYAALVWISRPL+D DI+
Sbjct: 327  FVKDIEKTINKMENKLVRVKNLKLVGSDGWNLMREGEAEKQKQYAALVWISRPLKDEDIQ 386

Query: 1438 TVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKE 1617
             VSSLK+ K++QRTPIRVLHRRSPLEREKIIHWM  E IAG+ QYFLLHLCTQAGTYIKE
Sbjct: 387  CVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKTETIAGSSQYFLLHLCTQAGTYIKE 446

Query: 1618 FVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCFMT 1731
            FVHGDLGRT PSIGSILGCRAEI+QLDVTD+KM+CF+T
Sbjct: 447  FVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT 484



 Score =  162 bits (411), Expect(2) = e-154
 Identities = 95/226 (42%), Positives = 130/226 (57%)
 Frame = +3

Query: 147 EDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLDKHT 326
           E  VR LP  AVKEL S GVC RCIFRLFG+ G +Y+    SP SL  +           
Sbjct: 13  EQMVRALPSDAVKELLSHGVCTRCIFRLFGLQGPVYA----SPPSLSSLF---------- 58

Query: 327 VGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQ 506
                         ++  +   C++CLGILQF Y N +         + L   I ++VK+
Sbjct: 59  --------------DATQQDCLCTLCLGILQFTYSNVQN--------DNLPLLIADMVKR 96

Query: 507 EGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIVN 686
           + YQ D FSLEVS+PP+I+++ + +  YMK KYG++ WFQE L S  IS KDALK+S++ 
Sbjct: 97  QAYQFDTFSLEVSIPPIIIDDVNFLCSYMKTKYGSQPWFQENLHSGCISTKDALKFSLIY 156

Query: 687 PLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQG 824
           PL+ LL+ KS M  F IRLTYTHTK +    +     ++CKR++ G
Sbjct: 157 PLQNLLECKSNMGPFRIRLTYTHTKGNDKSSDCAA--ETCKRRKIG 200


>ref|XP_006838680.1| hypothetical protein AMTR_s00002p00244810 [Amborella trichopoda]
            gi|548841186|gb|ERN01249.1| hypothetical protein
            AMTR_s00002p00244810 [Amborella trichopoda]
          Length = 526

 Score =  376 bits (965), Expect(2) = e-150
 Identities = 183/280 (65%), Positives = 217/280 (77%)
 Frame = +1

Query: 886  DSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRW 1065
            D  I +   GL        F+ PP KVN+PC+++ LC+RTP+Y  GRYLKYSRNVSQ+RW
Sbjct: 245  DLEINKESFGLDIAEQDRIFQVPPAKVNQPCKVTTLCYRTPVYVGGRYLKYSRNVSQTRW 304

Query: 1066 IIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQV 1245
            IID+ERMGE SVEEI+GN  L + + D+YKFHAAGREDIDVRMLGSGRPFLVEI NAR +
Sbjct: 305  IIDEERMGETSVEEIIGNLTLSILKADSYKFHAAGREDIDVRMLGSGRPFLVEIANARSL 364

Query: 1246 PSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLED 1425
             S     E++ KI                G   WT++++GEAEKQKQYAALVWISR LED
Sbjct: 365  SSHTEFAELQEKINNLEPRIVRVKNLKEVGVDAWTILQQGEAEKQKQYAALVWISRSLED 424

Query: 1426 TDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGT 1605
             D+K +SS+KE  I+QRTPIRVLHRRSPLER+++IHWM  ERI G+ Q+F+LHLCTQAGT
Sbjct: 425  EDLKCMSSIKEMDIIQRTPIRVLHRRSPLERKRMIHWMRAERIHGSKQFFILHLCTQAGT 484

Query: 1606 YIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMDCF 1725
            YIKEFVHGDLGRT P++GSILGCRAEI+QLDVTDVKMDCF
Sbjct: 485  YIKEFVHGDLGRTHPNLGSILGCRAEILQLDVTDVKMDCF 524



 Score =  186 bits (472), Expect(2) = e-150
 Identities = 109/249 (43%), Positives = 154/249 (61%), Gaps = 8/249 (3%)
 Frame = +3

Query: 132 EMQVVEDAVRQ--LPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCVVLG-- 299
           E Q+VE+++RQ  LP HA+++L SIGVC RCIFRLFG+ G +YSC SLS S L  VL   
Sbjct: 8   EKQLVEESIRQSGLPCHALRDLLSIGVCPRCIFRLFGVHGDVYSCLSLSSSLLWSVLDLS 67

Query: 300 ----ELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSA 467
               E TD   H        +   + ++ ++ P +C +C GILQ  Y        +    
Sbjct: 68  NGHEEATDCKVH--------EGSSSPQDLKVGPEFCVVCWGILQLSYDEQAQQTFD---- 115

Query: 468 NGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLSRR 647
             L AS  +LVK EG+++D+FSLEVS+PP+IL NE +VWLYMK++YG+E  FQ+K  S  
Sbjct: 116 --LVASTAQLVKGEGFEIDSFSLEVSVPPIILGNERSVWLYMKKRYGSESRFQDKFFSGS 173

Query: 648 ISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGT 827
           IS KDAL++SI   LE++L VK  + SF IR TYTH+  S  + + V+ +++   K+Q  
Sbjct: 174 ISVKDALRFSITKSLEEMLAVKVAVRSFHIRFTYTHSDASSKI-SLVQGSRTDGHKKQ-K 231

Query: 828 DGTLDILNG 854
            G  ++L G
Sbjct: 232 RGDKELLEG 240


>ref|XP_007017947.1| Pseudouridine synthase family protein, putative isoform 2 [Theobroma
            cacao] gi|508723275|gb|EOY15172.1| Pseudouridine synthase
            family protein, putative isoform 2 [Theobroma cacao]
          Length = 476

 Score =  302 bits (774), Expect(2) = e-150
 Identities = 147/205 (71%), Positives = 169/205 (82%)
 Frame = +1

Query: 904  YFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDER 1083
            + +G+QD+  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ER
Sbjct: 272  FSNGVQDQETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEER 331

Query: 1084 MGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFV 1263
            MGEASVEEI+G+ ILP+C+GDNYKFHAAGREDIDVRMLGSGRPFL+EIQNARQVPSE+ V
Sbjct: 332  MGEASVEEIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIV 391

Query: 1264 KEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTV 1443
            KE+E+KI                GSQGW LM EGEAEKQKQY ALVWISRPLED D++T+
Sbjct: 392  KEMESKINGLENKSVGVKNLKVVGSQGWALMHEGEAEKQKQYCALVWISRPLEDEDMQTI 451

Query: 1444 SSLKETKIMQRTPIRVLHRRSPLER 1518
            S L + KI+QRTPIRVLHRRSPLER
Sbjct: 452  SLLNDMKILQRTPIRVLHRRSPLER 476



 Score =  257 bits (656), Expect(2) = e-150
 Identities = 143/280 (51%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 227
           M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1   MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 228 LFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 407
           LFGI  HIY  +S S S L  +L E T                  S +SE+E  +CS+CL
Sbjct: 57  LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 408 GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 584
           G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99  GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 585 LYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 764
            +MK+KY +E WFQE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159 SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 765 SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECT 881
           SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+
Sbjct: 219 SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCS 258


>emb|CAH67165.1| H0211B05.2 [Oryza sativa Indica Group] gi|218195372|gb|EEC77799.1|
            hypothetical protein OsI_16978 [Oryza sativa Indica
            Group]
          Length = 536

 Score =  375 bits (962), Expect(2) = e-140
 Identities = 181/278 (65%), Positives = 215/278 (77%)
 Frame = +1

Query: 886  DSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRW 1065
            D+ I +  +G+QD+     F+ PPEKV EPC L I C R+PIY  GRYLK SRNVSQS W
Sbjct: 256  DAFINKTLEGIQDQDFRSLFQLPPEKVLEPCHLVISCQRSPIYIGGRYLKLSRNVSQSCW 315

Query: 1066 IIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQV 1245
            IIDDERMGEASVEEI+G  +  +C+GD YKFHAAGREDIDVRMLGSGRPFLVE+ N R +
Sbjct: 316  IIDDERMGEASVEEIIGENVRAICKGDGYKFHAAGREDIDVRMLGSGRPFLVEVLNVRSI 375

Query: 1246 PSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLED 1425
            PS   V++I  KI                GS+ WT+MREGEAEKQKQYAAL+W SRPL D
Sbjct: 376  PSATEVQQIADKINDSEKKHVRVRNLKLVGSEIWTMMREGEAEKQKQYAALIWTSRPLTD 435

Query: 1426 TDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGT 1605
             D+  +S +K+ +I+Q+TPIRVLHRRSPLER++IIHWM +E+I+G   Y+LLHLCTQAGT
Sbjct: 436  DDLHNISLIKDMEIVQKTPIRVLHRRSPLERKRIIHWMEIEKISGGSNYYLLHLCTQAGT 495

Query: 1606 YIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMD 1719
            YIKEFVHGDLGRT PS+G +L CRAEI+QLDVTDVKMD
Sbjct: 496  YIKEFVHGDLGRTHPSVGVMLSCRAEILQLDVTDVKMD 533



 Score =  153 bits (386), Expect(2) = e-140
 Identities = 97/249 (38%), Positives = 139/249 (55%), Gaps = 6/249 (2%)
 Frame = +3

Query: 108 STAGEHPAEMQVVED--AVRQLPP-HAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPS 278
           + A E  AE + + +  A    PP HA+  L S+GVC+RCIFR FG   +   C SL+ S
Sbjct: 2   AAAAEVDAEARSILERAAASSFPPLHAIHHLLSVGVCVRCIFRFFGAFSYAAPCLSLTAS 61

Query: 279 SLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGT--LI 452
            L   L E  D  K          S L+  E+     YCSIC G+L      D G   L 
Sbjct: 62  VLHSFLEEHDDFAK------SGSCSCLSKDEA-----YCSICFGVLLPTCYQDDGVEPLR 110

Query: 453 NKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEK 632
           +    + + + I E V++EG+Q+D FSLE+SLP VI  N+ A+ LYMK KYG+  WF EK
Sbjct: 111 SVSPIDNVTSIISEAVQREGHQVDEFSLEISLPAVIAANDRAIRLYMKEKYGSANWFDEK 170

Query: 633 LLSRR-ISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCK 809
           + S++ +S K+AL+  +V  +EK ++VK   +SF IRLTYTH + S+ +   +  +   K
Sbjct: 171 IFSQQTMSVKEALRILLVPSVEKQMNVKHGNNSFRIRLTYTHDEGSQKLLRLLPNDHGRK 230

Query: 810 RKRQGTDGT 836
           RK +  DG+
Sbjct: 231 RKTESRDGS 239


>gb|EEE61489.1| hypothetical protein OsJ_15774 [Oryza sativa Japonica Group]
          Length = 536

 Score =  375 bits (962), Expect(2) = e-140
 Identities = 181/278 (65%), Positives = 215/278 (77%)
 Frame = +1

Query: 886  DSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRW 1065
            D+ I +  +G+QD+     F+ PPEKV EPC L I C R+PIY  GRYLK SRNVSQS W
Sbjct: 256  DAFINKNLEGIQDQDFRSLFQLPPEKVLEPCHLVISCQRSPIYIGGRYLKLSRNVSQSCW 315

Query: 1066 IIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQV 1245
            IIDDERMGEASVEEI+G  +  +C+GD YKFHAAGREDIDVRMLGSGRPFLVE+ N R +
Sbjct: 316  IIDDERMGEASVEEIIGENVRAICKGDGYKFHAAGREDIDVRMLGSGRPFLVEVLNVRSI 375

Query: 1246 PSEVFVKEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLED 1425
            PS   V++I  KI                GS+ WT+MREGEAEKQKQYAAL+W SRPL D
Sbjct: 376  PSATEVQQIADKINDSEKKHVRVRNLKLVGSEIWTMMREGEAEKQKQYAALIWTSRPLTD 435

Query: 1426 TDIKTVSSLKETKIMQRTPIRVLHRRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGT 1605
             D+  +S +K+ +I+Q+TPIRVLHRRSPLER++IIHWM +E+I+G   Y+LLHLCTQAGT
Sbjct: 436  DDLHNISLIKDMEIVQKTPIRVLHRRSPLERKRIIHWMEIEKISGGSNYYLLHLCTQAGT 495

Query: 1606 YIKEFVHGDLGRTIPSIGSILGCRAEIVQLDVTDVKMD 1719
            YIKEFVHGDLGRT PS+G +L CRAEI+QLDVTDVKMD
Sbjct: 496  YIKEFVHGDLGRTHPSVGVMLSCRAEILQLDVTDVKMD 533



 Score =  152 bits (385), Expect(2) = e-140
 Identities = 97/249 (38%), Positives = 140/249 (56%), Gaps = 6/249 (2%)
 Frame = +3

Query: 108 STAGEHPAEMQVVED--AVRQLPP-HAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPS 278
           + A E  AE + + +  A    PP HA+  L S+GVC+RCIFR FG   +   C SL+ S
Sbjct: 2   AAAAEVDAEARSILERAAASSFPPLHAIHHLLSVGVCVRCIFRFFGAFSYAAPCLSLTAS 61

Query: 279 SLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGT--LI 452
            L   L E  D  K          S L+  E+     YCSIC G+L      D G   L 
Sbjct: 62  VLHSFLEEHDDSAK------SGSCSCLSKDEA-----YCSICFGVLLPTCYQDDGVEPLR 110

Query: 453 NKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEK 632
           +    + + + I E V++EG+Q+D FSLE+SLP VI  N+ A+ LYMK KYG+  WF EK
Sbjct: 111 SVSPIDNVTSIISEAVQREGHQVDEFSLEISLPAVIAANDRAIRLYMKEKYGSANWFDEK 170

Query: 633 LLSRR-ISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCK 809
           + S++ +S K+AL+  +V  +EK ++VK   +SF IRLTYTH + S+ +   +  ++  K
Sbjct: 171 IFSQQTMSVKEALRILLVPSVEKQMNVKHGNNSFRIRLTYTHDEGSQKLLRLLPNDRGRK 230

Query: 810 RKRQGTDGT 836
           RK +  DG+
Sbjct: 231 RKTESRDGS 239


>ref|XP_007017949.1| Pseudouridine synthase family protein, putative isoform 4 [Theobroma
            cacao] gi|508723277|gb|EOY15174.1| Pseudouridine synthase
            family protein, putative isoform 4 [Theobroma cacao]
          Length = 469

 Score =  267 bits (682), Expect(2) = e-139
 Identities = 129/185 (69%), Positives = 150/185 (81%)
 Frame = +1

Query: 904  YFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDER 1083
            + +G+QD+  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ER
Sbjct: 272  FSNGVQDQETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEER 331

Query: 1084 MGEASVEEILGNTILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFV 1263
            MGEASVEEI+G+ ILP+C+GDNYKFHAAGREDIDVRMLGSGRPFL+EIQNARQVPSE+ V
Sbjct: 332  MGEASVEEIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIV 391

Query: 1264 KEIEAKIXXXXXXXXXXXXXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTV 1443
            KE+E+KI                GSQGW LM EGEAEKQKQY ALVWISRPLED D++T+
Sbjct: 392  KEMESKINGLENKSVGVKNLKVVGSQGWALMHEGEAEKQKQYCALVWISRPLEDEDMQTI 451

Query: 1444 SSLKE 1458
            S L +
Sbjct: 452  SLLND 456



 Score =  257 bits (656), Expect(2) = e-139
 Identities = 143/280 (51%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
 Frame = +3

Query: 48  MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 227
           M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1   MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 228 LFGICGHIYSCTSLSPSSLCVVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 407
           LFGI  HIY  +S S S L  +L E T                  S +SE+E  +CS+CL
Sbjct: 57  LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 408 GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 584
           G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99  GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 585 LYMKRKYGAECWFQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 764
            +MK+KY +E WFQE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159 SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 765 SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECT 881
           SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+
Sbjct: 219 SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCS 258


>ref|XP_006307295.1| hypothetical protein CARUB_v10008914mg [Capsella rubella]
            gi|482576006|gb|EOA40193.1| hypothetical protein
            CARUB_v10008914mg [Capsella rubella]
          Length = 504

 Score =  390 bits (1003), Expect(2) = e-139
 Identities = 189/253 (74%), Positives = 211/253 (83%)
 Frame = +1

Query: 958  EKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMC 1137
            EKV EPC  S+ C++ PI+F GRY KYSRNVSQSRWIIDDERMGEASVEEILG  ILP C
Sbjct: 249  EKVYEPCIFSVHCNKMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPAC 308

Query: 1138 RGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKIXXXXXXXXXXX 1317
             GD+YKFHAAGREDIDVRMLGSGRPFL+E+QN+RQ PSE  +KEIE KI           
Sbjct: 309  LGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQCPSEQSLKEIEEKINNSEKKLVGVK 368

Query: 1318 XXXXXGSQGWTLMREGEAEKQKQYAALVWISRPLEDTDIKTVSSLKETKIMQRTPIRVLH 1497
                 GSQ W +MREGEAEKQKQY ALVWISRPLE+ D  ++SSLKE KI+Q+TP+RVLH
Sbjct: 369  DLKCIGSQCWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISSLKELKILQKTPVRVLH 428

Query: 1498 RRSPLEREKIIHWMTVERIAGNCQYFLLHLCTQAGTYIKEFVHGDLGRTIPSIGSILGCR 1677
            RRSPL+REKIIHWM V++I G+ QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCR
Sbjct: 429  RRSPLDREKIIHWMKVDKIKGHSQYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSILGCR 488

Query: 1678 AEIVQLDVTDVKM 1716
            AEI+QLDVTDVKM
Sbjct: 489  AEIIQLDVTDVKM 501



 Score =  133 bits (334), Expect(2) = e-139
 Identities = 88/238 (36%), Positives = 127/238 (53%)
 Frame = +3

Query: 144 VEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCVVLGELTDLDKH 323
           V +  R L   AVK+L S+GVC RCIFRL  +       +S+S S+L   L  +      
Sbjct: 30  VYETARSLHSGAVKDLLSLGVCERCIFRLVAVEAFDSDVSSVSTSALRSWLNAV------ 83

Query: 324 TVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVK 503
                   D    S ES    I C +CLGILQFV+ + +  L+  D+++   A I +LVK
Sbjct: 84  --------DDETGSSESSCSRI-CIVCLGILQFVFSDAEQKLVKADTSSDYVARITDLVK 134

Query: 504 QEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWFQEKLLSRRISAKDALKYSIV 683
           Q+ ++ D+F LEVS+P  I +NE AV  Y+K KY  E W Q      +IS KDALK+ ++
Sbjct: 135 QDRHEFDSFGLEVSVPSTITDNERAVLSYLKGKYSDEGWLQRD----KISVKDALKFLVL 190

Query: 684 NPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGS 857
           +PL+  L  +S  SSF IRLTY+   + +        ++S +RK    +G+  I   S
Sbjct: 191 DPLKASLGAQSDSSSFHIRLTYSEA-SDEAPGVSKTTHESKRRKTDAENGSNSISENS 247