BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00009687
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21137.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...    77   3e-12
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...    74   3e-11
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...    74   3e-11
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...    72   6e-11
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...    72   8e-11
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...    72   1e-10
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid...    72   1e-10
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob...    71   1e-10
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob...    71   1e-10
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...    71   1e-10
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...    71   1e-10
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...    71   2e-10
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ...    71   2e-10
gb|ACN25520.1| unknown [Zea mays]                                      71   2e-10
gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]     71   2e-10
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...    71   2e-10
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...    70   3e-10
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...    70   3e-10
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami...    70   4e-10

>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R+C+S+EEIVKVNVPYGAKLLCQELFSMGI LKFETQLC
Sbjct: 1182 RYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R+C+S+EEIVKVNVPYGAKLLCQELFSMGI LKFETQLC
Sbjct: 1160 RYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            RFC+S E+IVKVNVPYGAKLLCQELFSMGI LKF+T++C
Sbjct: 1179 RFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            RFC+S E+IVKVNVPYGAKLLCQELFSMGI LKF+T++C
Sbjct: 1179 RFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1217


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R C+S +EIVKVNVPYGAKLLCQELFSMGI LKFET+LC
Sbjct: 1165 RVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFETRLC 1203


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            RFC+S E++V+VNVPYGAKLLCQELFSMGI LKF+T++C
Sbjct: 1167 RFCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTEIC 1205


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            RFC+S E+IVKV+VPYGAKLLCQELFSMGI LKF+T++C
Sbjct: 1181 RFCESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTEIC 1219


>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
           [Solanum bulbocastanum]
          Length = 304

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
           RFC+S E+IVKV+VPYGAKLLCQELFSMGI LKF+T++C
Sbjct: 266 RFCESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTEIC 304


>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1073

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R CQS ++IV+VNVPYGAKLLCQELFSMGI LKFETQLC
Sbjct: 1035 RGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1073


>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
            gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
            isoform 2 [Theobroma cacao]
          Length = 961

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R CQS ++IV+VNVPYGAKLLCQELFSMGI LKFETQLC
Sbjct: 923  RGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 961


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R CQS ++IV+VNVPYGAKLLCQELFSMGI LKFETQLC
Sbjct: 1146 RGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1184


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            RFC+S E+IVKV VPYGAKLLCQELFSMGI LKF+T++C
Sbjct: 1181 RFCESVEDIVKVGVPYGAKLLCQELFSMGISLKFDTEIC 1219


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 6    FCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            FC+S+E IV++NVPYGAKLL QELFSMGICLKFETQ+C
Sbjct: 1192 FCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229


>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
            gi|283443696|gb|ADB19857.1| required to maintain
            repression 7/RNA polymerase D second largest subunit [Zea
            mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
            gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
            RNA polymerase subunit family protein [Zea mays]
          Length = 1229

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 6    FCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            FC+S+E IV++NVPYGAKLL QELFSMGICLKFETQ+C
Sbjct: 1192 FCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229


>gb|ACN25520.1| unknown [Zea mays]
          Length = 141

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 6   FCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
           FC+S+E IV++NVPYGAKLL QELFSMGICLKFETQ+C
Sbjct: 104 FCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 141


>gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]
          Length = 1170

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +3

Query: 6    FCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            FC+S+E IV++NVPYGAKLL QELFSMGICLKFETQ+C
Sbjct: 1133 FCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1170


>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 3   RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
           RFC S E++V++NVPYGAKLLCQELFSMGI LKF+T+LC
Sbjct: 783 RFCDSVEDVVRLNVPYGAKLLCQELFSMGISLKFDTELC 821


>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R C+S E++V+VNVPYGAKLLCQELFSMGI LKF+T+LC
Sbjct: 1173 RVCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTELC 1211


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = +3

Query: 3    RFCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            R C+S ++IV+VNVPYGAKLLCQELFSMGI LKFETQLC
Sbjct: 1159 RVCESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197


>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
            mays]
          Length = 2163

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +3

Query: 6    FCQSTEEIVKVNVPYGAKLLCQELFSMGICLKFETQLC 119
            FC+S+E IV++NVPYGAKLL QELFSMGICLKFET++C
Sbjct: 2126 FCKSSENIVRINVPYGAKLLYQELFSMGICLKFETEVC 2163