BLASTX nr result
ID: Paeonia24_contig00009044
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00009044
(2854 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1087 0.0
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 1067 0.0
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 1018 0.0
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 984 0.0
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 957 0.0
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 946 0.0
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 946 0.0
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 941 0.0
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 906 0.0
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 905 0.0
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su... 900 0.0
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 900 0.0
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 892 0.0
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 891 0.0
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas... 887 0.0
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 887 0.0
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no... 887 0.0
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas... 882 0.0
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 863 0.0
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 858 0.0
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 1087 bits (2810), Expect = 0.0
Identities = 544/823 (66%), Positives = 649/823 (78%), Gaps = 4/823 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMIDEV CGLL AEQTC FKQLLVDS+ +FL+ GE NQN + +V L YE+Q SAA
Sbjct: 669 RKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAA 728
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L Q SV AFKQ FRDIQNL Y+YA+ +NSLLAM+KAGSKGNLLKLVQQGLCLGLQHSLVP
Sbjct: 729 LCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVP 788
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWG--SQSYIPYAVVENSYITGLNPLETFVHSITG 2319
LSF +P QLSCAAWN QK Q ++SYIPYAVVENS++ GLNPLE FVHS+T
Sbjct: 789 LSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTS 848
Query: 2318 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 2139
R+SSFS++A+LPGTLTR+L FFMRDLYI YDGTVRNAYGNQLVQFSYNIE ++ S G+
Sbjct: 849 RDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGI- 907
Query: 2138 GFSGENSYACGA-MGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPK 1962
N C MGGQ VGS++ACAISEA+YSALDQPISLLE SPLLNLK VLECGL K
Sbjct: 908 -----NEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRK 962
Query: 1961 STADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFS 1782
STAD+T+SLFLS+KL +++HGFEYGALEVKNHLE+LLFSDIVSTVMI+FSPQ S+THFS
Sbjct: 963 STADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFS 1022
Query: 1781 PWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKE 1602
PWVCHFHVC+EI K+R LK HSIID+LYMKCN AR ESK+NLP LQITSK+C +D M+KE
Sbjct: 1023 PWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVD-MEKE 1081
Query: 1601 NNDMICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKST 1422
++D CITV+ N K SC+Q +T RDLVIPF LG V+KG +KKVDILWND
Sbjct: 1082 DSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPDSDVLK 1141
Query: 1421 GLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWT 1242
G LYL+V++S DC + W L++ C+QIMDMIDW+RSHPDNI+ +F YGID W
Sbjct: 1142 SSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWK 1201
Query: 1241 FFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQAC 1062
+F+ +LKSAISDIGKT+LPEHLLL A+ LS+TGEFVGLNAKGMA QKE TS+SSP MQ C
Sbjct: 1202 YFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGC 1261
Query: 1061 FSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYS 882
FS+P +CFIKA K AV DNL GSLDALAWG PS+G+ G F+++YS KG+ELA+P D+Y
Sbjct: 1262 FSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYK 1321
Query: 881 LLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYIS 705
LLGSQ S EQ ++ +P +C + KCG + +Y GDS KG K+ E K++ R+++S
Sbjct: 1322 LLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLS 1381
Query: 704 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 525
LND+Q LS K IL+KYP+NHQL+E DK+TL++ L HPRRDEKIG G Q IKV YH K
Sbjct: 1382 LNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSK 1441
Query: 524 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 396
+ + CF +VRTDGT EDFSYHKCV G LE+I PR+ +SY+S+
Sbjct: 1442 YHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1484
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 1067 bits (2759), Expect = 0.0
Identities = 541/823 (65%), Positives = 647/823 (78%), Gaps = 4/823 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMIDEV CGLL AEQTC FKQLLVDS+ +FL+ GE NQN + +V L YE+Q SAA
Sbjct: 538 RKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAA 597
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L Q SV AFKQ FRDIQNL Y+YA+ +NSLLAM+KAGSKGNLLKLVQQGLCLGLQHSLVP
Sbjct: 598 LCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVP 657
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWG--SQSYIPYAVVENSYITGLNPLETFVHSITG 2319
LSF +P QLSCAAWN QK Q ++SYIPYAVVENS++ GLNPLE FVHS+T
Sbjct: 658 LSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTS 717
Query: 2318 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 2139
R+SSFS++A+LPGTLTR+L FFMRDLYI YDGTVRNAYGNQLVQFSYNIE ++ S G+
Sbjct: 718 RDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGI- 776
Query: 2138 GFSGENSYACGA-MGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPK 1962
N C MGGQ VGS++ACAISEA+YSALDQPISLLE SPLLNLK VLECGL K
Sbjct: 777 -----NEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRK 831
Query: 1961 STADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFS 1782
STAD+T+SLFLS+KL +++HGFEYGALEVKNHLE+LLFSDIVSTVMI+FSPQ S+THFS
Sbjct: 832 STADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFS 891
Query: 1781 PWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKE 1602
PWVCHFHVC+EI K+R LK HSIID+LYMKCN AR ESK+NLP LQITSK+C +D M+KE
Sbjct: 892 PWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVD-MEKE 950
Query: 1601 NNDMICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKST 1422
++D CITV+ N K SC+Q +T RDLVIPF LG V+KG IK D+L KS+
Sbjct: 951 DSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKG-CCIKNSDVL--------KSS 1001
Query: 1421 GLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWT 1242
G LYL+V++S DC + W L++ C+QIMDMIDW+RSHPDNI+ +F YGID W
Sbjct: 1002 S--GRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWK 1059
Query: 1241 FFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQAC 1062
+F+ +LKSAISDIGKT+LPEHLLL A+ LS+TGEFVGLNAKGMA QKE TS+SSP MQ C
Sbjct: 1060 YFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGC 1119
Query: 1061 FSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYS 882
FS+P +CFIKA K AV DNL GSLDALAWG PS+G+ G F+++YS KG+ELA+P D+Y
Sbjct: 1120 FSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYK 1179
Query: 881 LLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYIS 705
LLGSQ S EQ ++ +P +C + KCG + +Y GDS KG K+ E K++ R+++S
Sbjct: 1180 LLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLS 1239
Query: 704 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 525
LND+Q LS K IL+KYP+NHQL+E DK+TL++ L HPRRDEKIG G Q IKV YH K
Sbjct: 1240 LNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSK 1299
Query: 524 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 396
+ + CF +VRTDGT EDFSYHKCV G LE+I PR+ +SY+S+
Sbjct: 1300 YHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1342
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 1018 bits (2633), Expect = 0.0
Identities = 519/829 (62%), Positives = 637/829 (76%), Gaps = 10/829 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
+KNM+DE+ CGL E EQTC FKQL+VDSNHDFLV EE + M L+V+Q+CYEKQ+SAA
Sbjct: 650 QKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCYEKQRSAA 709
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV +FKQVFRDIQNL Y+YA+ +NSLL M KAGSKGNLLKLVQ LCLGLQHSLVP
Sbjct: 710 LSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQHSLVP 769
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMT----WGSQSYIPYAVVENSYITGLNPLETFVHSI 2325
LSF P QLSCAAWNNQK+ +Q +++YIPYAVVE+S++TGLNPLE+FVHS+
Sbjct: 770 LSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPLESFVHSV 829
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSS-SS 2148
T R+SSFS++A+LPGTL+R+L FFMRDLY YDGTVRN+YG+ +VQF Y+I+KD SS +S
Sbjct: 830 TSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSYGDLVVQFCYDIDKDASSPTS 889
Query: 2147 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1968
HG E+S +GGQ VGSL+ACAISEA+YSALDQP+SLLE SPLLNLK V+ECG
Sbjct: 890 CAHGLISESSTIPEGIGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKRVVECGS 949
Query: 1967 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH 1788
+S ADQTM+LFLS KLGR+RHG EY ALEVKNHLERL FSDIV+TV IIFSPQ + H
Sbjct: 950 KRSNADQTMTLFLSNKLGRKRHGSEYAALEVKNHLERLTFSDIVTTVSIIFSPQMYRENH 1009
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS--KECSMDE 1614
F+PWVCHFHVCK+ +KRR+LKV SIIDSL+M C A+ K++LP +QITS + CS +
Sbjct: 1010 FTPWVCHFHVCKDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHID 1069
Query: 1613 MQKENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRG 1437
M E+ D CITVT E K+S ++ + RD+VIP+ L VIKGF IKKVDILW DR
Sbjct: 1070 MPNED-DTFCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRLK 1128
Query: 1436 VQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYG 1260
V K GELYL+VF+S D TK+W L+N+C+QIMDMIDW RSHPDNIN + AYG
Sbjct: 1129 VSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYG 1188
Query: 1259 IDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSS 1080
ID W FF+ NLKSAISD GKTIL EHLL+ AN LS+TGEFVGLN+KG+ Q+E VSS
Sbjct: 1189 IDAGWKFFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQREHAYVSS 1248
Query: 1079 PLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAK 900
P MQACFSNPSA F+KAAK+ D+LQG++DALAWG P +GT G F+++YS K LA+
Sbjct: 1249 PFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLAE 1308
Query: 899 PLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI 720
P+DVY LLGS ISSQ+Q VEF++P + + +K G + GDS + K E ++I
Sbjct: 1309 PVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELKKIETKRRSI 1368
Query: 719 -RNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIK 543
R ++L+D+Q LS +NIL KYP++H+L+E D +TL++ L HPRRDEKIG G QEIK
Sbjct: 1369 WRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEIK 1428
Query: 542 VGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 396
VGYHP+H + CF +VRTDGTI DFSYHKCV+G LE+IAP + KSY+SK
Sbjct: 1429 VGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSYKSK 1477
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 984 bits (2543), Expect = 0.0
Identities = 497/825 (60%), Positives = 621/825 (75%), Gaps = 6/825 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
R N+++E+ CGL EAEQ C+FKQLLVD+ DFL+ EEN++ +T + + C+EKQKSAA
Sbjct: 536 RNNLMEEILCGLQEAEQACIFKQLLVDNCQDFLMGCAEENRSPLTFDAEYFCHEKQKSAA 595
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q AFK +FRDIQ+L ++YA +NSLL M+KAGSKGNL KLVQ +CLGLQHSL+P
Sbjct: 596 LSQVVHDAFKHIFRDIQSLAHKYAGKDNSLLTMLKAGSKGNLQKLVQHSMCLGLQHSLIP 655
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LSF +P QLSCAAWNNQKA + Q G+ +SYIP AVV++S++TGLNPLE FVHS+
Sbjct: 656 LSFRIPNQLSCAAWNNQKACSLIQKVEGTYECVESYIPSAVVKSSFLTGLNPLECFVHSV 715
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS +A+LPGTLTRKL F MRDLY YDGTVRNAYGNQLVQFSY+I+ D S S+
Sbjct: 716 TSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDIDMDKSDSTS 775
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+++ AC +GGQ VGSL+ACA+SEA+YSALDQP+SLLE SPLLNLKN+LECG
Sbjct: 776 TS--HAKSTTACDGIGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSK 833
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHF 1785
KS+A QT+SLFLS+KLGR+RHGFEYGALEVKNHL L FSDIVSTVMIIFS Q+ SQ F
Sbjct: 834 KSSAKQTLSLFLSKKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQSNSQKRF 893
Query: 1784 SPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQK 1605
SPWV HFH+CKEIV++R+LKVHS++DSLY +CN AR E K+ L +L ITSK CS +
Sbjct: 894 SPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAAQTCN 953
Query: 1604 ENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDR-RGVQ 1431
++D CITVT EN KNS Q + ARDLVIPF LGTV+KGF +KKVDILWND R +
Sbjct: 954 GDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESK 1013
Query: 1430 KSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDI 1251
K G GELYL+V MS R ++W+ L++NC+QIMD+IDW RSHPDN++ AYGID
Sbjct: 1014 KIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDNVHDYCIAYGIDA 1073
Query: 1250 AWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLM 1071
W +F+ NL++A +DIGK ILP+HL+L A+ LS+TGEFVGLNAKG+A QK TSVSSP +
Sbjct: 1074 GWKYFLNNLETAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIAQQKGHTSVSSPFV 1133
Query: 1070 QACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLD 891
QACFS+P ACFIKAAK VVD L GS++ALAWG+TP GT F+++YS++G L+KPL+
Sbjct: 1134 QACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILYSKEGLNLSKPLN 1193
Query: 890 VYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRNY 711
Y LLGSQISS + F+ + + LDKC V + + K+ +F IR Y
Sbjct: 1194 PYDLLGSQISSSRENA-FETSKAWNNTLDKCDV--------TSIGLEKSESVFKSVIRKY 1244
Query: 710 ISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYH 531
+++ND+Q + T K ILRKY +N L E DKS L + L HP + +K+G GVQ+IKVG H
Sbjct: 1245 LTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSGVQDIKVGQH 1304
Query: 530 PKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 396
PKH + CF +VR D T EDFSYHKCV+G LE++AP + KSY SK
Sbjct: 1305 PKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAPERAKSYRSK 1349
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 957 bits (2473), Expect = 0.0
Identities = 479/823 (58%), Positives = 618/823 (75%), Gaps = 5/823 (0%)
Frame = -3
Query: 2849 KNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAAL 2670
+NM+D++ CGL EAE+TC KQL+VDS+ + L+ E+NQ+ +++ V++L YEKQKSAAL
Sbjct: 648 ENMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSAAL 707
Query: 2669 TQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPL 2490
Q SV AFK+VFRDIQNL Y+Y+ +NSLL M KAGSKGNL+KLVQ +CLGLQHSLV L
Sbjct: 708 NQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTL 767
Query: 2489 SFSLPRQLSCAAWNNQKASNRSQ---MTWGSQSYIPYAVVENSYITGLNPLETFVHSITG 2319
SFSLP +LSCAAWN+QK Q + +QS+IPYAVVENS+++GLNP E F HS+T
Sbjct: 768 SFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTN 827
Query: 2318 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 2139
R+SSFS++AE+PGTLTRKL F MRD+Y YDGTVRNAYGNQLVQF Y+I++ TS S
Sbjct: 828 RDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSESES-- 885
Query: 2138 GFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKS 1959
EN+ +GG VGSLAACAISEA+YSALDQPISLLE SPLLNLK VLECG ++
Sbjct: 886 ----ENNNRDRGIGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRN 941
Query: 1958 TADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSP 1779
+ QT SLFLSEKL ++ +GFEYGAL VKNHLER++F DIVS+VMIIFSP + HFSP
Sbjct: 942 STKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHFSP 1001
Query: 1778 WVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKEN 1599
WVCHFHVCKEI+K+R+LK++S+I SL M+C+ R E ++NLP+LQI +++C + + E+
Sbjct: 1002 WVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTED 1061
Query: 1598 NDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKST 1422
D +C+TVT EN KNS LQ + +DL+I F LGTVI+GF+ I +VDI WNDR V K
Sbjct: 1062 GDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPKPR 1121
Query: 1421 GLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWT 1242
GELYL+V MS + ++ W L+NNC+ IMD+IDW RSHPDN +++ AYGID W
Sbjct: 1122 CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWK 1180
Query: 1241 FFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQAC 1062
+F+ +L+SA D+GKTI EHLLL +N LS+TGEFVGLN KG+ HQ+E V +P MQAC
Sbjct: 1181 YFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQAC 1240
Query: 1061 FSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYS 882
FS+P AC IKAAK+ + DNL GSLDALAWG PSLGT G F+++YS KG+EL KP+DVY+
Sbjct: 1241 FSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYN 1300
Query: 881 LLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYIS 705
LLG Q + ++Q + + + + + +K + + G S +KG K + K+I R +++
Sbjct: 1301 LLGGQSTCEKQNTKIESLDK-NTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLT 1359
Query: 704 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 525
LND+Q LS + IL KY +N +LNE DKSTL++ L HP RDEKIGVG Q+IKVG H K
Sbjct: 1360 LNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSK 1419
Query: 524 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 396
+ + CF ++R+DGT EDFSYHKCV+G LE+IAP +VK Y+SK
Sbjct: 1420 YQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSK 1462
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 946 bits (2446), Expect = 0.0
Identities = 491/828 (59%), Positives = 614/828 (74%), Gaps = 5/828 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RK ++DE+ GL EA+ TC F+QL+VDS+ +FL+ E++++ +L+ + L YEKQ+SAA
Sbjct: 636 RKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAA 694
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AFK VF DIQNL Y+Y S +NSLLAM KAGSKGNLLKLVQ LCLGLQHSL P
Sbjct: 695 LSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAP 754
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGRE 2313
LSF P +LSCAAWN +A + ++ ++SYIP AVV NS++TGLNPLE F+HS+T R+
Sbjct: 755 LSFRFPHELSCAAWNRLRAGDNTEC---AKSYIPSAVVANSFLTGLNPLECFIHSVTSRD 811
Query: 2312 SSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGF 2133
SSFS++A+LPGTLTR+L FFMRDL YDGTVRNAYGNQ+VQFSYNIE ++ +
Sbjct: 812 SSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPT------ 865
Query: 2132 SGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKSTA 1953
G +GGQSVGSL+ACAISEA+YSALDQPISLLE SPLLNLKNVLECG KS A
Sbjct: 866 --------GEIGGQSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 917
Query: 1952 DQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPWV 1773
DQTMSLFLS KLG++RHGFEYGALEVKNHLE L+ SDIVST MII+SPQT S HFSPW+
Sbjct: 918 DQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWI 977
Query: 1772 CHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENND 1593
CHFHV KEI+KR LK HSIIDSLY +C AR E K+++P + I++K+CS MQKE ND
Sbjct: 978 CHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECND 1037
Query: 1592 MICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TG 1419
C+TV EN K + + ET + V+PF L TV+KGF IKKVDILW D++ KS
Sbjct: 1038 AFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDD 1097
Query: 1418 LFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTF 1239
FGELYL+V MS C T +W+AL+N+C QIMDMIDW RSHPDNI + AYGID F
Sbjct: 1098 SFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQF 1157
Query: 1238 FVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACF 1059
F+ NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA F
Sbjct: 1158 FLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFF 1217
Query: 1058 SNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSL 879
SNP A FIKAAK+ VDNLQGS+DAL WG PS+GT G F+++YS +G L+KP+DVY+L
Sbjct: 1218 SNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNL 1277
Query: 878 LGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYI 708
L + +SS +Q + + + + DKCG K +GD KG N + I +R
Sbjct: 1278 LSTPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSW 1332
Query: 707 SLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHP 528
+ NDV LS+ K IL KY + +L+E+DK+T++ L HPRR+EK+G+ +I+V YHP
Sbjct: 1333 TYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHP 1392
Query: 527 KHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 384
+H S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1393 EHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1440
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 946 bits (2446), Expect = 0.0
Identities = 491/828 (59%), Positives = 614/828 (74%), Gaps = 5/828 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RK ++DE+ GL EA+ TC F+QL+VDS+ +FL+ E++++ +L+ + L YEKQ+SAA
Sbjct: 674 RKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAA 732
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AFK VF DIQNL Y+Y S +NSLLAM KAGSKGNLLKLVQ LCLGLQHSL P
Sbjct: 733 LSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAP 792
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGRE 2313
LSF P +LSCAAWN +A + ++ ++SYIP AVV NS++TGLNPLE F+HS+T R+
Sbjct: 793 LSFRFPHELSCAAWNRLRAGDNTEC---AKSYIPSAVVANSFLTGLNPLECFIHSVTSRD 849
Query: 2312 SSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGF 2133
SSFS++A+LPGTLTR+L FFMRDL YDGTVRNAYGNQ+VQFSYNIE ++ +
Sbjct: 850 SSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPT------ 903
Query: 2132 SGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKSTA 1953
G +GGQSVGSL+ACAISEA+YSALDQPISLLE SPLLNLKNVLECG KS A
Sbjct: 904 --------GEIGGQSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 955
Query: 1952 DQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPWV 1773
DQTMSLFLS KLG++RHGFEYGALEVKNHLE L+ SDIVST MII+SPQT S HFSPW+
Sbjct: 956 DQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWI 1015
Query: 1772 CHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENND 1593
CHFHV KEI+KR LK HSIIDSLY +C AR E K+++P + I++K+CS MQKE ND
Sbjct: 1016 CHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECND 1075
Query: 1592 MICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TG 1419
C+TV EN K + + ET + V+PF L TV+KGF IKKVDILW D++ KS
Sbjct: 1076 AFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDD 1135
Query: 1418 LFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTF 1239
FGELYL+V MS C T +W+AL+N+C QIMDMIDW RSHPDNI + AYGID F
Sbjct: 1136 SFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQF 1195
Query: 1238 FVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACF 1059
F+ NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA F
Sbjct: 1196 FLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFF 1255
Query: 1058 SNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSL 879
SNP A FIKAAK+ VDNLQGS+DAL WG PS+GT G F+++YS +G L+KP+DVY+L
Sbjct: 1256 SNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNL 1315
Query: 878 LGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYI 708
L + +SS +Q + + + + DKCG K +GD KG N + I +R
Sbjct: 1316 LSTPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSW 1370
Query: 707 SLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHP 528
+ NDV LS+ K IL KY + +L+E+DK+T++ L HPRR+EK+G+ +I+V YHP
Sbjct: 1371 TYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHP 1430
Query: 527 KHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 384
+H S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1431 EHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1478
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 941 bits (2432), Expect = 0.0
Identities = 488/828 (58%), Positives = 612/828 (73%), Gaps = 5/828 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RK ++DE+ GL EA+ TC F+QL+VDS+ +FL+ +++++ +L+ + L YEKQ+SAA
Sbjct: 636 RKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS-AKDSESTRSLQGEHLSYEKQRSAA 694
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AFK VF DIQNL Y+Y S +NSLL M KAGSKGNLLKLVQ LCLGLQHSL P
Sbjct: 695 LSQASVDAFKHVFWDIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQHSLAP 754
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGRE 2313
LSF P +LSCAAWN +A + ++ ++SYIP AVVENS++TGLNPLE F+HS+T R+
Sbjct: 755 LSFRFPHELSCAAWNRLRAGDNTEC---AKSYIPSAVVENSFLTGLNPLECFIHSVTSRD 811
Query: 2312 SSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGF 2133
SSFS++A+LPGTLTR+L FFMRDL YDGTVRNAYGNQ+VQFSYNIE ++ +
Sbjct: 812 SSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPT------ 865
Query: 2132 SGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKSTA 1953
G +G Q VGSL+ACAISEA+YSALDQPISLLE SPLLNLKNVLECG KS A
Sbjct: 866 --------GEIGDQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 917
Query: 1952 DQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPWV 1773
DQTMSLFLS KLG++RHGFEYGALEVKNHLE L+ SDIVST MII+SPQT S HFSPW+
Sbjct: 918 DQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWI 977
Query: 1772 CHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENND 1593
CHFHV KEI+KR LK HSIIDSLY +C AR E K+++P + I++K+CS MQKE ND
Sbjct: 978 CHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECND 1037
Query: 1592 MICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TG 1419
C+TV EN K + + ET + V+PF L TV+KGF IKKVDILW D++ KS
Sbjct: 1038 AFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDD 1097
Query: 1418 LFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTF 1239
FGELYL+V MS C T +W+AL+N+C QIMDMIDW RSHPDNI + AYGID F
Sbjct: 1098 SFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQF 1157
Query: 1238 FVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACF 1059
F+ NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA F
Sbjct: 1158 FLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFF 1217
Query: 1058 SNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSL 879
SNP A FIKAAK+ VDNLQGS+DAL WG PS+GT G F+++YS +G L+KP+DVY+L
Sbjct: 1218 SNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNL 1277
Query: 878 LGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYI 708
L + +SS +Q + + + + DKCG K +GD KG N + I +R
Sbjct: 1278 LSTPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSW 1332
Query: 707 SLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHP 528
+ NDV LS+ K IL KY + +L+E+DK+T++ L HPRR+EK+G+ +I+V YHP
Sbjct: 1333 TYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHP 1392
Query: 527 KHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 384
+H S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1393 EHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1440
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 906 bits (2342), Expect = 0.0
Identities = 486/841 (57%), Positives = 615/841 (73%), Gaps = 22/841 (2%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMI+E+ GL +AEQ C FKQLL+D DFL +E++NA+T++ D+L YE+Q SAA
Sbjct: 548 RKNMIEEIFYGLQDAEQACNFKQLLLDCYCDFLSGSIQESENAITVDADRLNYERQISAA 607
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA +N+ LAM KAGSKGNLLKLVQ +CLG+Q+SLV
Sbjct: 608 LSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVR 667
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCAAWN+QK + QM+ G+ QSYIPYAVVE+S++TGLNPLE FVHS+
Sbjct: 668 LSYRLPRHLSCAAWNSQKWLDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSV 727
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS+HA+LPGTLTR+L FFMRDL+ YDGTVRN YGNQL+QFSY+IE+D+S G
Sbjct: 728 TNRDSSFSDHADLPGTLTRRLMFFMRDLHDAYDGTVRNLYGNQLIQFSYDIEEDSSCDKG 787
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ A+GG+ VG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG
Sbjct: 788 FQEY---------AIGGEPVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSR 838
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQT-CSQTH 1788
K DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVSTVMIIF+P SQ
Sbjct: 839 KRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSTVMIIFTPHDGSSQEK 898
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEM 1611
+SPWVCHFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M
Sbjct: 899 YSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSNRKCSADSM 958
Query: 1610 QKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDI 1458
KE D CITVT EN KN +Q ++ RDLVIPF LGT IKGF +KKVD+
Sbjct: 959 AKEGEDTSIDKKEGDDCITVTIVENSKNP-IQLDSVRDLVIPFLLGTAIKGFLDVKKVDV 1017
Query: 1457 LWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNIN 1281
LWN++ V+ S G GELYL+V +S++ SR + W L+N C +IM +IDW RSHPDNIN
Sbjct: 1018 LWNNQSKVKNSCNGFSGELYLRVTLSSEGSRGRFWGVLLNLCHKIMHIIDWTRSHPDNIN 1077
Query: 1280 TMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQK 1101
+AYGID W +F +L SA SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q+
Sbjct: 1078 HFSSAYGIDAGWQYFFNSLASATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQR 1137
Query: 1100 EQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSE 921
+ SVSSP +QACF+NP +CFIKAAKS V DNLQGSLDALAWG+ S+GT+G F+++YSE
Sbjct: 1138 KHASVSSPFVQACFANPGSCFIKAAKSGVTDNLQGSLDALAWGNCLSMGTSGMFDIIYSE 1197
Query: 920 KGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCS------RMLDKCGVKPLYTYGDSPL 759
K +AK +VY LL + FD PN+ + DKCG + + G + L
Sbjct: 1198 K---VAKSGNVYELLEA---------SFDKPNNKAGTHLHKYSSDKCGSEFRHKNGYA-L 1244
Query: 758 KGRKNYEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRR 579
K K ++ L RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HPR+
Sbjct: 1245 KEGKQWKTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPRK 1301
Query: 578 DEKIGVGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYES 399
EK G+G Q+IKVG+HPK+ S CF +VR DGT+EDFSY KC++G L+++ P+K K E
Sbjct: 1302 SEKFGIGPQDIKVGWHPKYKDSRCFHIVRIDGTVEDFSYRKCILGALDIVDPKKSKIQEK 1361
Query: 398 K 396
K
Sbjct: 1362 K 1362
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 905 bits (2339), Expect = 0.0
Identities = 479/854 (56%), Positives = 613/854 (71%), Gaps = 15/854 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
R+NMI+E+ GL +AE+ C FKQLL+D DFL +E++NA+T+ D+L YE+Q SA+
Sbjct: 634 RENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISAS 693
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA NS LAM KAGSKGNLLKLVQ +CLG+Q+SLV
Sbjct: 694 LSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVR 753
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCA WN+QK + QM+ G+ QSYIPYAVVE+S++TGLNPLE FVHS+
Sbjct: 754 LSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSV 813
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS+HA+LPGTLTR+L FFMRDLY YDGTVRN YGNQL+QFSY+IE+D+S + G
Sbjct: 814 TNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKG 873
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG
Sbjct: 874 FQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSR 924
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQTH 1788
K DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P SQ
Sbjct: 925 KRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEK 984
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQ 1608
+SPWVCHFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S++CS D M
Sbjct: 985 YSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCSADSMV 1044
Query: 1607 KENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDIL 1455
KE D CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDIL
Sbjct: 1045 KEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDIL 1103
Query: 1454 WNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINT 1278
WN++ V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN
Sbjct: 1104 WNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINH 1163
Query: 1277 MFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKE 1098
+AYGID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q++
Sbjct: 1164 FSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRK 1223
Query: 1097 QTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEK 918
SVSSP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSEK
Sbjct: 1224 HASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEK 1283
Query: 917 GYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE 738
G+++AK +DVY LL + + + S DKCG + + G + LK K ++
Sbjct: 1284 GHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQWK 1339
Query: 737 IFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVG 558
L RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+G
Sbjct: 1340 TIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIG 1396
Query: 557 VQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*Q 378
Q+IKVG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K
Sbjct: 1397 PQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK----------- 1445
Query: 377 NNVREKKWDWEVDS 336
++EKKW D+
Sbjct: 1446 --IQEKKWSGHGDT 1457
>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
[Glycine max]
Length = 1381
Score = 900 bits (2327), Expect = 0.0
Identities = 479/855 (56%), Positives = 613/855 (71%), Gaps = 16/855 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
R+NMI+E+ GL +AE+ C FKQLL+D DFL +E++NA+T+ D+L YE+Q SA+
Sbjct: 557 RENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISAS 616
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA NS LAM KAGSKGNLLKLVQ +CLG+Q+SLV
Sbjct: 617 LSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVR 676
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCA WN+QK + QM+ G+ QSYIPYAVVE+S++TGLNPLE FVHS+
Sbjct: 677 LSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSV 736
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS+HA+LPGTLTR+L FFMRDLY YDGTVRN YGNQL+QFSY+IE+D+S + G
Sbjct: 737 TNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKG 796
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG
Sbjct: 797 FQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSR 847
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQTH 1788
K DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P SQ
Sbjct: 848 KRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEK 907
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEM 1611
+SPWVCHFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M
Sbjct: 908 YSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSM 967
Query: 1610 QKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDI 1458
KE D CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDI
Sbjct: 968 VKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDI 1026
Query: 1457 LWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNIN 1281
LWN++ V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN
Sbjct: 1027 LWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNIN 1086
Query: 1280 TMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQK 1101
+AYGID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q+
Sbjct: 1087 HFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQR 1146
Query: 1100 EQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSE 921
+ SVSSP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSE
Sbjct: 1147 KHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSE 1206
Query: 920 KGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNY 741
KG+++AK +DVY LL + + + S DKCG + + G + LK K +
Sbjct: 1207 KGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQW 1262
Query: 740 EIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGV 561
+ L RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+
Sbjct: 1263 KTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGI 1319
Query: 560 GVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM* 381
G Q+IKVG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K
Sbjct: 1320 GPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK---------- 1369
Query: 380 QNNVREKKWDWEVDS 336
++EKKW D+
Sbjct: 1370 ---IQEKKWSGHGDT 1381
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 900 bits (2327), Expect = 0.0
Identities = 479/855 (56%), Positives = 613/855 (71%), Gaps = 16/855 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
R+NMI+E+ GL +AE+ C FKQLL+D DFL +E++NA+T+ D+L YE+Q SA+
Sbjct: 634 RENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISAS 693
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA NS LAM KAGSKGNLLKLVQ +CLG+Q+SLV
Sbjct: 694 LSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVR 753
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCA WN+QK + QM+ G+ QSYIPYAVVE+S++TGLNPLE FVHS+
Sbjct: 754 LSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSV 813
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS+HA+LPGTLTR+L FFMRDLY YDGTVRN YGNQL+QFSY+IE+D+S + G
Sbjct: 814 TNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKG 873
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG
Sbjct: 874 FQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSR 924
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQTH 1788
K DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P SQ
Sbjct: 925 KRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEK 984
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEM 1611
+SPWVCHFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M
Sbjct: 985 YSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSM 1044
Query: 1610 QKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDI 1458
KE D CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDI
Sbjct: 1045 VKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDI 1103
Query: 1457 LWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNIN 1281
LWN++ V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN
Sbjct: 1104 LWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNIN 1163
Query: 1280 TMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQK 1101
+AYGID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q+
Sbjct: 1164 HFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQR 1223
Query: 1100 EQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSE 921
+ SVSSP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSE
Sbjct: 1224 KHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSE 1283
Query: 920 KGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNY 741
KG+++AK +DVY LL + + + S DKCG + + G + LK K +
Sbjct: 1284 KGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQW 1339
Query: 740 EIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGV 561
+ L RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+
Sbjct: 1340 KTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGI 1396
Query: 560 GVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM* 381
G Q+IKVG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K
Sbjct: 1397 GPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK---------- 1446
Query: 380 QNNVREKKWDWEVDS 336
++EKKW D+
Sbjct: 1447 ---IQEKKWSGHGDT 1458
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 892 bits (2304), Expect = 0.0
Identities = 478/852 (56%), Positives = 604/852 (70%), Gaps = 12/852 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMI+E+ GL EAEQ C F QLLVD DFL +E +N + ++VD L YE+Q SAA
Sbjct: 643 RKNMIEEISYGLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAA 702
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA +N+ LAM KAGSKGNLLKLVQ +CLGLQHSLV
Sbjct: 703 LSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVR 762
Query: 2492 LSFSLPRQLSCAAWNNQKASNR-SQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGR 2316
L + +PR+LSCAAWN+QK S QSYIPYAVVE+S++TGLNPLE FVHS+T R
Sbjct: 763 LPYKIPRKLSCAAWNSQKGMQIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNR 822
Query: 2315 ESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHG 2136
+SSFS++A+LPGTLTR+L FFMRD+Y YDGTVRN YGNQL+QFSY+ E+D+S S
Sbjct: 823 DSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDS---- 878
Query: 2135 FSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKST 1956
+ +GG+ VG+L+ACA+SEA+YSAL QPISLLE SPLLNLK VLECG K
Sbjct: 879 -----HFREDTIGGEPVGTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRG 933
Query: 1955 ADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPW 1776
DQT+SLFLSEK+G+QR+GFEY ALEVKN+LERL+FSDIVSTVMIIF+PQ+ S +SPW
Sbjct: 934 GDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPW 993
Query: 1775 VCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENN 1596
VCHFH+ KE V RR L+VHSIIDSLY + + R SKV LP L+I++K+CS+ M KE
Sbjct: 994 VCHFHLDKENVTRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTKKCSVHYMAKEGG 1053
Query: 1595 DMI---------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWND 1446
+ CITVT EN NS +Q + R+++IPF L T IKG IKKVDILW D
Sbjct: 1054 ETSVDKEIDGEDCITVTIVENYMNS-VQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKD 1112
Query: 1445 -RRGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFA 1269
+G + G GELYL+V MS+D R W AL+N+C +IM MIDW RSHPDNI+ +
Sbjct: 1113 LSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCS 1172
Query: 1268 AYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTS 1089
A+GID W F+ NL SA SD G +ILP+HL L AN LS++GEFVGLN+KGMA Q+ S
Sbjct: 1173 AFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHAS 1232
Query: 1088 VSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYE 909
VSSP +QACFSNP + F+KAAKS VVDNLQG+LD LAWG+ S+GT+G F+++YSEK E
Sbjct: 1233 VSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQE 1292
Query: 908 LAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFL 729
LAK +DVY LL + +Q + N+ S DKC + + G K K ++
Sbjct: 1293 LAKSVDVYDLLETSFDQLDQEINTSQSNNYSS--DKCNSQFRHKKGRYAPKEPKQWK--- 1347
Query: 728 KAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQE 549
IRN+++ ND+Q L+ + IL KYP++ L+ERDK T++ L HPRR+EK+G G Q
Sbjct: 1348 SVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQH 1407
Query: 548 IKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNV 369
IKVG+HPK S CFF++RTDGT+EDFSY KC++G L+++ P K SK+QK
Sbjct: 1408 IKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEK-----SKIQK------ 1456
Query: 368 REKKWDWEVDSQ 333
KKW D++
Sbjct: 1457 --KKWSGHDDTE 1466
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 891 bits (2303), Expect = 0.0
Identities = 478/855 (55%), Positives = 610/855 (71%), Gaps = 16/855 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
R+NMI+E+ GL +AE+ C FKQLL+D DFL +E++NA+T+ D+L YE+Q SA+
Sbjct: 634 RENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISAS 693
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA NS LAM KAGSKGNLLKLVQ +CLG+Q+SLV
Sbjct: 694 LSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVR 753
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCA WN+QK + QM+ G+ QSYIPYAVVE+S++TGLNPLE FVHS+
Sbjct: 754 LSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSV 813
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS+HA+LPGTLTR+L FFMRDLY YDGTVRN YGNQL+QFSY+IE+D+S + G
Sbjct: 814 TNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKG 873
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG
Sbjct: 874 FQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSR 924
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQTH 1788
K DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P SQ
Sbjct: 925 KRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEK 984
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEM 1611
+SPWVCHFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M
Sbjct: 985 YSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSM 1044
Query: 1610 QKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDI 1458
KE D CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDI
Sbjct: 1045 VKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDI 1103
Query: 1457 LWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNIN 1281
LWN++ V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN
Sbjct: 1104 LWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNIN 1163
Query: 1280 TMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQK 1101
+AYGID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q+
Sbjct: 1164 HFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQR 1223
Query: 1100 EQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSE 921
+ SVSSP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSE
Sbjct: 1224 KHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSE 1283
Query: 920 KGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNY 741
K +AK +DVY LL + + + S DKCG + + G + LK K +
Sbjct: 1284 K---VAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQW 1336
Query: 740 EIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGV 561
+ L RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+
Sbjct: 1337 KTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGI 1393
Query: 560 GVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM* 381
G Q+IKVG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K
Sbjct: 1394 GPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK---------- 1443
Query: 380 QNNVREKKWDWEVDS 336
++EKKW D+
Sbjct: 1444 ---IQEKKWSGHGDT 1455
>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031868|gb|ESW30447.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 887 bits (2293), Expect = 0.0
Identities = 466/854 (54%), Positives = 609/854 (71%), Gaps = 14/854 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMI+E+ GL +AE+ C FKQLL+D DFL EE++N+MT++ D L YE+Q SAA
Sbjct: 630 RKNMIEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAA 689
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+ VFR+IQ+L +YA +N+ LAM KAGSK +L++L Q +CLG+Q+SLV
Sbjct: 690 LSQASVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVR 749
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCAAWN+QK + Q+ G+ QSYIP AVV++S++TGLNPLE FVHS+
Sbjct: 750 LSYRLPRHLSCAAWNSQKGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSV 809
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R S FS +A++PGTLTR+L FFMRDL+ YDGTVRN YGNQL+QFSY+I+++TS
Sbjct: 810 TIRASGFSENADVPGTLTRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDIDENTSC--- 866
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ S+ A+GG+ VG+L+A A+SEA YSALDQP+SLLE SPLLNLKNVLECG
Sbjct: 867 ------DKSFKEYAIGGEPVGALSASAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSR 920
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH- 1788
K DQ++SLF SEK+G+QRHGFEY ALEVKN+LERLLFS IVSTVMIIF+P S
Sbjct: 921 KKNGDQSVSLFFSEKVGKQRHGFEYAALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEK 980
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQ 1608
+SPWVCHFH+ KEI+ RRKLKVHSIID LY + E KV L+I+SK+CS+D
Sbjct: 981 YSPWVCHFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSKKCSVDSTA 1040
Query: 1607 KENNDMI--------CITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILW 1452
KE D+ CITVT + +Q + RDL+IPFFLGT IKGF IKKVDILW
Sbjct: 1041 KEGEDICIDKEDSDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILW 1100
Query: 1451 NDR-RGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTM 1275
N++ +G G GELYL+V +++ + + W LVN+C +IM +IDW RSHPDNIN +
Sbjct: 1101 NNQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYL 1160
Query: 1274 FAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQ 1095
+AYGID+AW ++ K+L SAISD GK+ILP+HL L AN +S++GEFVGLNAKGMA Q++
Sbjct: 1161 SSAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQH 1220
Query: 1094 TSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKG 915
SVSSP +QACFSNP FIKAAKS + DNLQGSLDALAWG+ PS+GT+G F+++YSEKG
Sbjct: 1221 ASVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKG 1280
Query: 914 YELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEI 735
+E+ K +DVY LL + + F N+ S KCG + + G + +G++
Sbjct: 1281 HEVDKAVDVYKLLEASFDKPNNKIGFHAHNNSS---GKCGSEFRHKNGYAFKEGKQ---- 1333
Query: 734 FLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGV 555
+ +RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HPRR EK+G+G
Sbjct: 1334 WKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGP 1393
Query: 554 QEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QN 375
Q+IKVG+HPK S CF +VRTDGT+EDFSY KC++ LE++ P+ SK+QK
Sbjct: 1394 QDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKM-----SKIQK---- 1444
Query: 374 NVREKKWDWEVDSQ 333
KKW D+Q
Sbjct: 1445 ----KKWSARDDAQ 1454
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 887 bits (2293), Expect = 0.0
Identities = 478/853 (56%), Positives = 604/853 (70%), Gaps = 13/853 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMI+E+ GL EAEQ C F QLLVD DFL +E +N + ++VD L YE+Q SAA
Sbjct: 643 RKNMIEEISYGLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAA 702
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+QVFR+IQ+L +YA +N+ LAM KAGSKGNLLKLVQ +CLGLQHSLV
Sbjct: 703 LSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVR 762
Query: 2492 LSFSLPRQLSCAAWNNQKASNR-SQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGR 2316
L + +PR+LSCAAWN+QK S QSYIPYAVVE+S++TGLNPLE FVHS+T R
Sbjct: 763 LPYKIPRKLSCAAWNSQKGMQIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNR 822
Query: 2315 ESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHG 2136
+SSFS++A+LPGTLTR+L FFMRD+Y YDGTVRN YGNQL+QFSY+ E+D+S S
Sbjct: 823 DSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDS---- 878
Query: 2135 FSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKST 1956
+ +GG+ VG+L+ACA+SEA+YSAL QPISLLE SPLLNLK VLECG K
Sbjct: 879 -----HFREDTIGGEPVGTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRG 933
Query: 1955 ADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPW 1776
DQT+SLFLSEK+G+QR+GFEY ALEVKN+LERL+FSDIVSTVMIIF+PQ+ S +SPW
Sbjct: 934 GDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPW 993
Query: 1775 VCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQI-TSKECSMDEMQKEN 1599
VCHFH+ KE V RR L+VHSIIDSLY + + R SKV LP L+I T+++CS+ M KE
Sbjct: 994 VCHFHLDKENVTRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTNRKCSVHYMAKEG 1053
Query: 1598 NDMI---------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWN 1449
+ CITVT EN NS +Q + R+++IPF L T IKG IKKVDILW
Sbjct: 1054 GETSVDKEIDGEDCITVTIVENYMNS-VQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWK 1112
Query: 1448 D-RRGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMF 1272
D +G + G GELYL+V MS+D R W AL+N+C +IM MIDW RSHPDNI+
Sbjct: 1113 DLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFC 1172
Query: 1271 AAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQT 1092
+A+GID W F+ NL SA SD G +ILP+HL L AN LS++GEFVGLN+KGMA Q+
Sbjct: 1173 SAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHA 1232
Query: 1091 SVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGY 912
SVSSP +QACFSNP + F+KAAKS VVDNLQG+LD LAWG+ S+GT+G F+++YSEK
Sbjct: 1233 SVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQ 1292
Query: 911 ELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIF 732
ELAK +DVY LL + +Q + N+ S DKC + + G K K ++
Sbjct: 1293 ELAKSVDVYDLLETSFDQLDQEINTSQSNNYSS--DKCNSQFRHKKGRYAPKEPKQWK-- 1348
Query: 731 LKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQ 552
IRN+++ ND+Q L+ + IL KYP++ L+ERDK T++ L HPRR+EK+G G Q
Sbjct: 1349 -SVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQ 1407
Query: 551 EIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNN 372
IKVG+HPK S CFF++RTDGT+EDFSY KC++G L+++ P K SK+QK
Sbjct: 1408 HIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEK-----SKIQK----- 1457
Query: 371 VREKKWDWEVDSQ 333
KKW D++
Sbjct: 1458 ---KKWSGHDDTE 1467
>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
Length = 1410
Score = 887 bits (2292), Expect = 0.0
Identities = 467/836 (55%), Positives = 591/836 (70%), Gaps = 8/836 (0%)
Frame = -3
Query: 2849 KNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAAL 2670
KNM DE+ GL EAEQ C+FKQLL ++ DFL E E+ + ++L+V++L ++KQ+SA L
Sbjct: 595 KNMKDEIFYGLQEAEQACMFKQLL-NTCWDFLTEDSMEDLSPISLQVEKLSHDKQRSAVL 653
Query: 2669 TQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPL 2490
+Q S+ AFK+VFRDIQ L +RYA +NSLL M+KAGSKGNLLKLVQ +CLGLQHSLVPL
Sbjct: 654 SQASIDAFKKVFRDIQTLAFRYACEDNSLLTMLKAGSKGNLLKLVQHSMCLGLQHSLVPL 713
Query: 2489 SFSLPRQLSCAAWNNQKAS----NRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSIT 2322
SF P LSCAAWN K S + ++SYIPYAVV NS++TGLNPLE+FVHS+T
Sbjct: 714 SFGFPHLLSCAAWNEHKVSCLIQEDADAPKSAKSYIPYAVVGNSFLTGLNPLESFVHSVT 773
Query: 2321 GRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGM 2142
RESSFS++AELPGTL R+L +FMRDLYI YDGT+RN+YG+ +VQF Y ++ TS
Sbjct: 774 SRESSFSDNAELPGTLHRRLMYFMRDLYIAYDGTIRNSYGSHVVQFYYGTDEGTSE---- 829
Query: 2141 HGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPK 1962
+ GQ VGSL+ACAISEA+YSALDQPISLLE SPLLNLKN LECG K
Sbjct: 830 -------------IAGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNALECGSKK 876
Query: 1961 STADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH-- 1788
QTM L+LS +LGRQRHG+EY ALEVKN+LE L+FSDIVSTVMI F+ Q SQ
Sbjct: 877 RQGGQTMLLYLSRRLGRQRHGYEYAALEVKNYLEALMFSDIVSTVMITFTSQAGSQKSQK 936
Query: 1787 -FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEM 1611
FSPW EI++RR+L V S+I+SLY + + +R SKV LP L+I SK+CS+
Sbjct: 937 SFSPW--------EILRRRRLTVQSVINSLYERHSTSRKGSKVKLPNLRIRSKDCSVPAT 988
Query: 1610 QKENNDMICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQ 1431
++E+ND CITV+ E KNS +Q T +DL+IPF L T++KGF I+KVDILW+DR
Sbjct: 989 REEDNDTCCITVSIECSKNSVIQLITVQDLLIPFLLETIVKGFREIEKVDILWSDRSNTS 1048
Query: 1430 KST-GLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGID 1254
K+T GELYLKV MS D W+ L+N+C++IMD+IDW RSHP+N+N + YGID
Sbjct: 1049 KATRDSSGELYLKVSMSGDSGVKSYWSTLMNDCLRIMDLIDWSRSHPENVNEFCSVYGID 1108
Query: 1253 IAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPL 1074
W FF+ NL+SA+SD+GKTILPEHLLL AN LS TG FVGL KG+A Q+E SV++P
Sbjct: 1109 SGWKFFLNNLESAVSDVGKTILPEHLLLVANTLSVTGNFVGLTPKGLARQREHASVATPF 1168
Query: 1073 MQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPL 894
QACFSNP+ACFIKAAK+ V D L G+LDALAWG+ P LGT G FELV+S KG+E+ KP+
Sbjct: 1169 SQACFSNPAACFIKAAKAEVTDGLHGTLDALAWGNIPPLGTGGQFELVFSGKGHEVDKPI 1228
Query: 893 DVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRN 714
+VY +L + IS Q V + P++ + K G L Y S +G K I I+
Sbjct: 1229 NVYDMLATGISPDVQGVN-ETPDAKNHRSVKFGA--LLLYDKSVSQGLKKLGISKDRIKK 1285
Query: 713 YISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGY 534
L+D+ LS+ IL KYP+N L+ +DKSTL++ L HPR DEKIG G Q+IKV Y
Sbjct: 1286 LFKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFHPRIDEKIGTGFQDIKVAY 1345
Query: 533 HPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVR 366
HPKH +S CF +VR DGT+EDFSY KCV+G LE+I P+ + Y+S ++ + VR
Sbjct: 1346 HPKHQSSRCFVLVRADGTVEDFSYRKCVLGALEIIDPQAAEIYKSNMRYDGNDQVR 1401
>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031869|gb|ESW30448.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 882 bits (2278), Expect = 0.0
Identities = 465/855 (54%), Positives = 609/855 (71%), Gaps = 15/855 (1%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNMI+E+ GL +AE+ C FKQLL+D DFL EE++N+MT++ D L YE+Q SAA
Sbjct: 630 RKNMIEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAA 689
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
L+Q SV AF+ VFR+IQ+L +YA +N+ LAM KAGSK +L++L Q +CLG+Q+SLV
Sbjct: 690 LSQASVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVR 749
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ LPR LSCAAWN+QK + Q+ G+ QSYIP AVV++S++TGLNPLE FVHS+
Sbjct: 750 LSYRLPRHLSCAAWNSQKGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSV 809
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R S FS +A++PGTLTR+L FFMRDL+ YDGTVRN YGNQL+QFSY+I+++TS
Sbjct: 810 TIRASGFSENADVPGTLTRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDIDENTSC--- 866
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ S+ A+GG+ VG+L+A A+SEA YSALDQP+SLLE SPLLNLKNVLECG
Sbjct: 867 ------DKSFKEYAIGGEPVGALSASAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSR 920
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH- 1788
K DQ++SLF SEK+G+QRHGFEY ALEVKN+LERLLFS IVSTVMIIF+P S
Sbjct: 921 KKNGDQSVSLFFSEKVGKQRHGFEYAALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEK 980
Query: 1787 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEM 1611
+SPWVCHFH+ KEI+ RRKLKVHSIID LY + E KV L+I+S ++CS+D
Sbjct: 981 YSPWVCHFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSNRKCSVDST 1040
Query: 1610 QKENNDMI--------CITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDIL 1455
KE D+ CITVT + +Q + RDL+IPFFLGT IKGF IKKVDIL
Sbjct: 1041 AKEGEDICIDKEDSDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDIL 1100
Query: 1454 WNDR-RGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINT 1278
WN++ +G G GELYL+V +++ + + W LVN+C +IM +IDW RSHPDNIN
Sbjct: 1101 WNNQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINY 1160
Query: 1277 MFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKE 1098
+ +AYGID+AW ++ K+L SAISD GK+ILP+HL L AN +S++GEFVGLNAKGMA Q++
Sbjct: 1161 LSSAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQ 1220
Query: 1097 QTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEK 918
SVSSP +QACFSNP FIKAAKS + DNLQGSLDALAWG+ PS+GT+G F+++YSEK
Sbjct: 1221 HASVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEK 1280
Query: 917 GYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE 738
G+E+ K +DVY LL + + F N+ S KCG + + G + +G++
Sbjct: 1281 GHEVDKAVDVYKLLEASFDKPNNKIGFHAHNNSS---GKCGSEFRHKNGYAFKEGKQ--- 1334
Query: 737 IFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVG 558
+ +RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HPRR EK+G+G
Sbjct: 1335 -WKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIG 1393
Query: 557 VQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*Q 378
Q+IKVG+HPK S CF +VRTDGT+EDFSY KC++ LE++ P+ SK+QK
Sbjct: 1394 PQDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKM-----SKIQK--- 1445
Query: 377 NNVREKKWDWEVDSQ 333
KKW D+Q
Sbjct: 1446 -----KKWSARDDAQ 1455
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 863 bits (2229), Expect = 0.0
Identities = 466/868 (53%), Positives = 599/868 (69%), Gaps = 28/868 (3%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAA 2673
RKNM++E+ GL AEQ C F QLLVD DFL EEN+ +T++VD+L +E+Q SAA
Sbjct: 800 RKNMMEEISYGLRVAEQACDFNQLLVDHYSDFLSASPEENEKFVTVDVDRLNHERQISAA 859
Query: 2672 LTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVP 2493
+Q SV AF+ VFR+IQ+L ++A +NS LAM KAGSKGNLLKLVQ +CLGLQHSLV
Sbjct: 860 QSQASVDAFRHVFRNIQSLADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVR 919
Query: 2492 LSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSI 2325
LS+ +PR+LSCA WN+QK + +M+ + QSYI +AVVE+S++TGLNPLE FVHS+
Sbjct: 920 LSYRIPRELSCAGWNSQKGLHSMEMSSDTLEPKQSYIAHAVVESSFLTGLNPLECFVHSV 979
Query: 2324 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 2145
T R+SSFS++A+LPGTLTR+L FFMRD+Y YDGTVRN YGNQL+QFSY+ E+D+S S
Sbjct: 980 TNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDS- 1038
Query: 2144 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1965
+ +GG+ VG+L+ACA+SEA+YSAL QPISLLE SPLLNLKNVLECG
Sbjct: 1039 --------YFREDIIGGEPVGALSACAVSEAAYSALSQPISLLEASPLLNLKNVLECGSR 1090
Query: 1964 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHF 1785
K DQT+SLFLSEK+G+QR+GFEY ALEVKN+LER +FS+IVSTVMIIF+PQ CSQ +
Sbjct: 1091 KKGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERYMFSNIVSTVMIIFTPQHCSQVKY 1150
Query: 1784 SPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKE-------- 1629
SPWVCHFH+ KE V RRKL+VHSIIDSLY + + R ESKV LP+L+I+SK
Sbjct: 1151 SPWVCHFHLDKENVTRRKLEVHSIIDSLYQQYDSFRRESKVILPSLKISSKSGREVENKE 1210
Query: 1628 ---CSMDEMQK-----------ENNDMICITV-TFENLKNSCLQWETARDLVIPFFLGTV 1494
CS + K E + CITV E+ KNS +Q ++ R +IPF L T
Sbjct: 1211 GQTCSKCQDYKANEGGETSVGNEKDGEDCITVAVVEDSKNS-VQLDSVRKSLIPFLLQTA 1269
Query: 1493 IKGFSVIKKVDILWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDM 1317
IKGF IKKVDILW D V KS G GELYL+V MS+ W L+N+C +IM +
Sbjct: 1270 IKGFLEIKKVDILWKDLPKVTKSYNGSAGELYLRVTMSSGNDNGTFWGRLINHCHRIMPL 1329
Query: 1316 IDWKRSHPDNINTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEF 1137
IDW RSHPDNI+ +A+GID W + NL SA SD GK+ILP+HL L AN LS++GEF
Sbjct: 1330 IDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSASGEF 1389
Query: 1136 VGLNAKGMAHQKEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSL 957
VGLNAKGMA Q++ SVSSP +QACFSNP + F+KAAKS +VDNLQG+LDALAWG+ +
Sbjct: 1390 VGLNAKGMARQRKHASVSSPFVQACFSNPGSSFLKAAKSGIVDNLQGNLDALAWGNCLPM 1449
Query: 956 GTAGPFELVYSEKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYT 777
GT G F+++YSEK E+ K +DVY LL + + +Q E +IP S KC
Sbjct: 1450 GTGGQFDIIYSEKVEEINKSVDVYGLLETSFNQMDQ--EINIPQSRKYSSGKCSSDFRSK 1507
Query: 776 YGDSPLKGRKNYEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGL 597
G K K ++ +RN+++ ND+Q L+ + IL KY ++ L+E DK T++ L
Sbjct: 1508 NGGYTPKEPKQWK---SVLRNFMTANDIQRLTFDARVILNKYQIDETLSETDKLTIMKVL 1564
Query: 596 ERHPRRDEKIGVGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRK 417
HPRRDEK G G Q IKVG+HP+ S CFF++R DG++EDFSY KC++G L++I P+K
Sbjct: 1565 HFHPRRDEKFGSGPQNIKVGWHPEFTDSRCFFIIRKDGSVEDFSYRKCILGALDIIDPKK 1624
Query: 416 VKSYESKLQKM*QNNVREKKWDWEVDSQ 333
K ++ ++ KKW D +
Sbjct: 1625 SKIQRNRWSG--NGDMEAKKWSGNGDME 1650
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 858 bits (2217), Expect = 0.0
Identities = 455/824 (55%), Positives = 578/824 (70%), Gaps = 8/824 (0%)
Frame = -3
Query: 2852 RKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGE-ENQNAMTLEVDQLCYEKQKSA 2676
RKN+++E+ GL EAE+ C +QL++DS DFL+ E ++Q+ +T + CY+KQK+A
Sbjct: 627 RKNLMEEIFYGLQEAEEACTIRQLMLDSFQDFLMGYDENKSQSPLTFGSEHFCYQKQKTA 686
Query: 2675 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2496
AL+Q +V A K+ FRD+QNL Y+YA +NSLLAM KAGSKGN+LKLVQ +CLGLQHSLV
Sbjct: 687 ALSQVTVDAIKEGFRDVQNLAYKYAGVDNSLLAMFKAGSKGNMLKLVQHCMCLGLQHSLV 746
Query: 2495 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2328
PLSF P QLSC AWN+QKA Q + +SYIP AVV++S++TGLNP+E FVHS
Sbjct: 747 PLSFKFPNQLSCDAWNDQKARGIVQEVGRNFESIESYIPSAVVKSSFLTGLNPVECFVHS 806
Query: 2327 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 2148
+T R+ SFSN+AELPGTL RKL +FMRDL+ YDGTVRNAYGNQL+QFSY+I++ S++
Sbjct: 807 VTSRDGSFSNNAELPGTLNRKLMYFMRDLHTAYDGTVRNAYGNQLIQFSYDIDEGISTAD 866
Query: 2147 GMHGFSGENSYA-CGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECG 1971
S S CG G Q VG+L+ACAISEA+YSALDQP+SLLE SPLLNLKN+LECG
Sbjct: 867 STTNSSYAKSVINCG--GSQPVGALSACAISEAAYSALDQPVSLLEASPLLNLKNILECG 924
Query: 1970 LPKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQT 1791
+S+A QTMSLFLS+KL R RHGFEYGALEVKNHLE L FSDIVSTVMI+FS Q+ S+
Sbjct: 925 SKRSSAKQTMSLFLSDKLDRHRHGFEYGALEVKNHLEGLNFSDIVSTVMIMFSSQSGSKM 984
Query: 1790 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEM 1611
FSPWV HFH+ KEIV+RR+L V SII++LY CN A + K+ I +EC +
Sbjct: 985 RFSPWVSHFHISKEIVRRRRLNVQSIIEALYAMCNSAGADLKI-----MIIGREC---DC 1036
Query: 1610 QKENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGV 1434
ND CI+VT E NS + + R LVIPF L TV+KGF IKKVDILW DR G
Sbjct: 1037 CSTPNDTFCISVTLTEKYNNSSKELDKTRVLVIPFLLKTVVKGFLEIKKVDILWIDRPGS 1096
Query: 1433 QKSTGLFGELYLKVFMSADCSR-TKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGI 1257
GEL L+V MS + T +WN L+++CI +MDMIDW RSHPDN++ + AYGI
Sbjct: 1097 S------GELCLRVSMSGKTRKGTTLWNMLMDDCIPVMDMIDWSRSHPDNVHDICTAYGI 1150
Query: 1256 DIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSP 1077
D+ F+ L+SA D+GKTILP+HLLL A+ LS+TGEFV LNAKG+ Q E SV +P
Sbjct: 1151 DVGQKHFLNKLESATKDVGKTILPQHLLLVADCLSATGEFVSLNAKGIGQQLEHASVIAP 1210
Query: 1076 LMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKP 897
MQACFS P C +KAAK VVDNLQGSLDAL WG+TPSLG+ G F++++S KG +KP
Sbjct: 1211 FMQACFSTPGPCLVKAAKVGVVDNLQGSLDALTWGNTPSLGSGGQFDIIFS-KGPVSSKP 1269
Query: 896 LDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIR 717
+ VY LL SQI + Q F++ ++ + DK +Y G RK I +R
Sbjct: 1270 IKVYDLLSSQIITNPQ-NGFEMSDAPIHLSDKFVAPNMYKNGYL----RKWESITKSVLR 1324
Query: 716 NYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVG 537
+++ D+ LS KNIL+KY VN ++N+ DK L++ L HP D KIG+G++E+KVG
Sbjct: 1325 ENLTIQDIDRLSQALKNILQKYDVNERINDMDKQVLMMVLRFHPHGDRKIGLGIKEVKVG 1384
Query: 536 YHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSY 405
+HP H CF +VRTDGTIED SYHKC+ G ++IAP + K Y
Sbjct: 1385 HHPDHENVRCFMLVRTDGTIEDVSYHKCICGAYDIIAPHRAKGY 1428