BLASTX nr result
ID: Paeonia24_contig00008488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00008488
(702 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 266 4e-69
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 257 2e-66
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I... 256 5e-66
gb|AFK38034.1| unknown [Lotus japonicus] 254 2e-65
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun... 253 6e-65
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 252 7e-65
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 252 7e-65
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 251 1e-64
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I... 251 2e-64
ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, I... 250 3e-64
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 250 3e-64
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri... 250 4e-64
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 245 1e-62
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 245 1e-62
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 244 2e-62
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 243 6e-62
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 241 1e-61
gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlise... 240 3e-61
ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phas... 240 4e-61
ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, I... 237 2e-60
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 266 bits (681), Expect = 4e-69
Identities = 141/206 (68%), Positives = 157/206 (76%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M+A EEEI+RLFRIRKTVMQMLKDR YFV D+EI M KHQF+ K+GEN+KREDLVINK K
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 515 R-GNNEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R +++QIYVFFPEE KVGVKT+KTYTNRMKSENV RAILV
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEHQ+L +EKKTLL RYTVKETQLPRIQVSDPIARY+G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRY+TYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 257 bits (657), Expect = 2e-66
Identities = 136/206 (66%), Positives = 152/206 (73%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M PEEEITRL+R+RKTVMQMLKDR Y V D+EI M + QF KYGEN+KREDL INKTK
Sbjct: 1 MVYPEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTK 60
Query: 515 RG-NNEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R +++QIYVFFPEE KVGVKT+KTYTNRMKSENV RA+LV
Sbjct: 61 RSDSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEH +L +EKKTLL RYTVKETQLPRIQV+DPIA+YYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRY+TYR+VI
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVI 206
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 207
Score = 256 bits (654), Expect = 5e-66
Identities = 135/207 (65%), Positives = 155/207 (74%), Gaps = 24/207 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEEITRLFRIRKTV QML+DR YFV D+EI+M + QF +KYGEN+KRED+VINK+K
Sbjct: 1 MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60
Query: 515 RGNN-EQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILVXXXXXXXXXXXX------- 360
R ++ +QIYVFFPEEAKVG+K LKTYT RMKSENV RAILV
Sbjct: 61 RNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSK 120
Query: 359 ----------------KEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYY 228
K+HVLVPEHQ+L ++EKKTLL RYTVKETQLPRIQV+DP+ARYY
Sbjct: 121 SFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYY 180
Query: 227 GLKRGDVVKIIRPSETAGRYVTYRFVI 147
GLKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 GLKRGQVVKIIRPSETAGRYVTYRYVV 207
>gb|AFK38034.1| unknown [Lotus japonicus]
Length = 206
Score = 254 bits (649), Expect = 2e-65
Identities = 133/206 (64%), Positives = 152/206 (73%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
MA EE+IT+L RIRKTVMQML+DR Y V D+EI M +H+F KYG+N+KREDL INKTK
Sbjct: 1 MALTEEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTK 60
Query: 515 R-GNNEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
+ G ++QIYVFFP+E KVGVKT+KTYTNRM SENV RAILV
Sbjct: 61 KDGPSDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEHQIL + EKKTLL RYTVKETQLPRIQ++DP+ARYYG
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRY+TYRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206
>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
gi|462416214|gb|EMJ20951.1| hypothetical protein
PRUPE_ppa024345mg [Prunus persica]
Length = 206
Score = 253 bits (645), Expect = 6e-65
Identities = 129/206 (62%), Positives = 155/206 (75%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M PEEEITRL+R+R+TVMQML+DR+Y V D+EI M + QF KYGEN+KREDL INKTK
Sbjct: 1 MVLPEEEITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTK 60
Query: 515 RGNN-EQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R ++ +Q+YVFFPEE KVGVKT+KTYTNRMKS+NV+RAILV
Sbjct: 61 RNDSTDQLYVFFPEEPKVGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
EHVLVPEHQ+L ++EKKTLL RYTVKETQLPRIQ++DP+A+YYG
Sbjct: 121 FHMEVFQEPELMVNVTEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQLTDPVAKYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG V+KIIRPSETAGRY+TYR+V+
Sbjct: 181 LKRGQVMKIIRPSETAGRYITYRYVV 206
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 252 bits (644), Expect = 7e-65
Identities = 132/205 (64%), Positives = 152/205 (74%), Gaps = 23/205 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M E+EITRLFRIR+TVMQML+DR Y V D+E+ M K QF KYGEN+KREDL+INK++
Sbjct: 1 MVLSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSR 60
Query: 515 RGNN-EQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R ++ +QIYVFFPEE KVGVKT+KTY NRMKSENV RA+LV
Sbjct: 61 RNDSPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEHQ+L ++EKKTLL RYTVKETQLPRIQV+DPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFV 150
LKRG VVKIIRPSETAGRY+TYR+V
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYV 205
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 252 bits (644), Expect = 7e-65
Identities = 134/206 (65%), Positives = 151/206 (73%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEEI RL+RIRKTVMQML+DR + V D+EI M KH+F KYGE++KREDLVINK+K
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 515 RGNN-EQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILVXXXXXXXXXXXX------- 360
+ N+ +QIYVFFP+E KVGVKT+KTYTNRM SENV RAILV
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 359 ---------------KEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEH LVPEHQ+L D EKKTLL RYTVKETQLPRIQV+DP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 251 bits (642), Expect = 1e-64
Identities = 131/206 (63%), Positives = 151/206 (73%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M +EEITRL R+RK VMQMLKDR Y V D+EI+M K+QF++KYGEN+KREDLVINK
Sbjct: 1 MVLSDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGL 60
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R N ++QIY+FFPEE KVGVKT+KTYTNRMK E V RA+L+
Sbjct: 61 RNNSSDQIYIFFPEEPKVGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEHQ+L +EKKTLL RYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAEMLINIKEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 LKRGHVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 208
Score = 251 bits (640), Expect = 2e-64
Identities = 133/208 (63%), Positives = 155/208 (74%), Gaps = 25/208 (12%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEEITRLFRIRKTV QML+DR YFV D+EI+M + QF +KYGEN+KRED+VINK+K
Sbjct: 1 MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60
Query: 515 RGNN-EQIYV-FFPEEAKVGVKTLKTYTNRMKSENVSRAILVXXXXXXXXXXXX------ 360
R ++ +Q+Y+ FFPEEAKVG+K LKTYT RMKSENV RAILV
Sbjct: 61 RNDSSDQVYICFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATS 120
Query: 359 -----------------KEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARY 231
K+HVLVPEHQ+L ++EKKTLL RYTVKETQLPRIQV+DP+ARY
Sbjct: 121 KSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARY 180
Query: 230 YGLKRGDVVKIIRPSETAGRYVTYRFVI 147
YGLKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 YGLKRGQVVKIIRPSETAGRYVTYRYVV 208
>ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524595|ref|XP_004169307.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 207
Score = 250 bits (639), Expect = 3e-64
Identities = 131/207 (63%), Positives = 152/207 (73%), Gaps = 24/207 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M PEEEIT+LFR+RKTV+QMLKDR YFV D+E++M K QF K+GEN+KREDLVINK+K
Sbjct: 1 MVFPEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKVQFKNKFGENMKREDLVINKSK 60
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R N ++QIYVFFPEE KVG+K ++TY RMKSENV RAI V
Sbjct: 61 RNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVFRAIFVVQLNLTPFARNKIAELSSS 120
Query: 395 ----XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYY 228
KEHVL+PEHQ L D+EKKTLL RYTVKETQLPR+QV+DPI+RYY
Sbjct: 121 KLHLEVFQETELLVNIKEHVLIPEHQTLTDEEKKTLLGRYTVKETQLPRMQVTDPISRYY 180
Query: 227 GLKRGDVVKIIRPSETAGRYVTYRFVI 147
GLKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 GLKRGHVVKIIRPSETAGRYVTYRYVV 207
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 250 bits (639), Expect = 3e-64
Identities = 133/206 (64%), Positives = 151/206 (73%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEE+ RL+RIRKTVMQML+DR + V D+EI M KH+F KYGE++KREDLVINK+K
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 515 RGNN-EQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILVXXXXXXXXXXXX------- 360
+ N+ +QIYVFFP+E KVGVKT+KTYTNRM SENV RAILV
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 359 ---------------KEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEH LVPEHQ+L D EKKTLL RYTVKETQLPRIQV+DP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYRFV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 225
Score = 250 bits (638), Expect = 4e-64
Identities = 137/225 (60%), Positives = 153/225 (68%), Gaps = 42/225 (18%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M E+EI RLFRIR+TVMQMLKDR Y VTD EI + KHQF KYG+N+KREDLVI+K+K
Sbjct: 1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSK 60
Query: 515 RGNNE--------------------QIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV 396
R ++ QIYVFFPEE KVGVKT+KTYTNRMKSENV RAILV
Sbjct: 61 RDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV 120
Query: 395 ----------------------XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTV 282
KEHVLVPEHQ+L ++EKKTLL RYTV
Sbjct: 121 VQQSLTPFARTCIAEIASKFHLEVFQESELLVNIKEHVLVPEHQVLTNEEKKTLLERYTV 180
Query: 281 KETQLPRIQVSDPIARYYGLKRGDVVKIIRPSETAGRYVTYRFVI 147
KETQLPRIQ+SDPIARYYGLKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 KETQLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 225
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 245 bits (625), Expect = 1e-62
Identities = 125/206 (60%), Positives = 150/206 (72%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
MA EEE++RLFR+RKT+M+ML DR Y V D+EI M KHQF++KYGEN+KREDLV+ K K
Sbjct: 1 MALSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAK 60
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R N ++QIYVFFPEE KVGVKT+KTYT RMK E+V +AIL+
Sbjct: 61 RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
K HVL+PEH +L +EKK+LL RYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRY+TYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 245 bits (625), Expect = 1e-62
Identities = 131/206 (63%), Positives = 149/206 (72%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEEI RL+RI+KT+MQMLKDR YF+ D EI M QFI K+G+N+KREDLV K K
Sbjct: 1 MTLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMTLGQFIRKHGDNMKREDLVTLKAK 60
Query: 515 RG-NNEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R NN+Q+Y+FFP+EAKVGVKT+K YTNRMKSENV RAILV
Sbjct: 61 RNDNNDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEHQ+L +EKKTLL RYTVKETQLPRIQV+DPIARY+G
Sbjct: 121 FHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 244 bits (623), Expect = 2e-62
Identities = 128/206 (62%), Positives = 152/206 (73%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M+ +++ ++LFRIR+T+MQML+DR Y V D+EI M K QFIEK+G+ +K++DLVINKT
Sbjct: 1 MSGMDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTM 60
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R N +EQIYVFFPEE KVGVKT+KTYT RMKSENV RAILV
Sbjct: 61 RNNPSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEHQ+L +EKKTLL RYT+KETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 243 bits (619), Expect = 6e-62
Identities = 127/202 (62%), Positives = 149/202 (73%), Gaps = 23/202 (11%)
Frame = -2
Query: 683 EEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTKRG-N 507
EEE+ RL+RI+KT+MQML+DR YF+ D E+ M K QFI K+G+N+KREDLV K KR N
Sbjct: 4 EEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDN 63
Query: 506 NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV----------------------X 393
++Q+Y+FFP+EAKVGVKT+K YTNRMKSENV RAILV
Sbjct: 64 SDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLE 123
Query: 392 XXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYGLKRG 213
KEHVLVPEHQ+L +EKKTLL RYTVKETQLPRIQV+DPIARY+GLKRG
Sbjct: 124 VFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRG 183
Query: 212 DVVKIIRPSETAGRYVTYRFVI 147
VVKIIRPSETAGRYVTYR+V+
Sbjct: 184 QVVKIIRPSETAGRYVTYRYVV 205
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 241 bits (616), Expect = 1e-61
Identities = 124/206 (60%), Positives = 149/206 (72%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEE++RLFR+RKT+M+ML DR Y V D+EI M K++F++KYGEN+KREDLV+ K K
Sbjct: 1 MTLSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAK 60
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
R N ++QIYVFFPEE KVGVKT+KTYT RMK E+V +AIL+
Sbjct: 61 RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
K HVL+P+HQ L +EKKTLL RYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlisea aurea]
Length = 208
Score = 240 bits (613), Expect = 3e-61
Identities = 127/207 (61%), Positives = 148/207 (71%), Gaps = 24/207 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EE+ITRL+RIRKT+MQMLKDR Y V D+EIEM K QFI+KYGEN+KRED + K
Sbjct: 2 MILSEEQITRLYRIRKTLMQMLKDRGYIVGDFEIEMTKSQFIQKYGENMKREDQTVLKGL 61
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILVXXXXXXXXXXXX------- 360
R N ++QIYVFFPEE KVGVK +K YTN+MK E + +AILV
Sbjct: 62 RNNPSDQIYVFFPEEPKVGVKPIKAYTNKMKEEGIHKAILVVQQNLTPIARSCITETISS 121
Query: 359 ----------------KEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYY 228
K+HVLVPEHQ+L +EKKTLL RYTVKETQLPRIQV+DPIARYY
Sbjct: 122 KFHLEVFQEAELLINIKDHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYY 181
Query: 227 GLKRGDVVKIIRPSETAGRYVTYRFVI 147
G+KRG+VVKIIRPSETAGRYVTYR+V+
Sbjct: 182 GMKRGEVVKIIRPSETAGRYVTYRYVV 208
>ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phaseolus vulgaris]
gi|561026169|gb|ESW24854.1| hypothetical protein
PHAVU_004G166200g [Phaseolus vulgaris]
Length = 207
Score = 240 bits (612), Expect = 4e-61
Identities = 128/207 (61%), Positives = 150/207 (72%), Gaps = 24/207 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYG-ENLKREDLVINKT 519
M +EEI+RL+RIRKTVM ML+DR Y V D+EI M KH+F +G EN+KREDL +NK+
Sbjct: 1 MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKS 60
Query: 518 KRGNN-EQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILVXXXXXXXXXXXX------ 360
K+ N+ +QIYVFFP+EAKVGVKT+KTYTNRM ++NV RAILV
Sbjct: 61 KKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISS 120
Query: 359 ----------------KEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYY 228
KEH LVPEHQ+L D EKKTL+ RYTVKETQLPRIQV+DP+ARYY
Sbjct: 121 KFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYY 180
Query: 227 GLKRGDVVKIIRPSETAGRYVTYRFVI 147
GLKRG VVKIIRPSETAGRYVTYRFV+
Sbjct: 181 GLKRGQVVKIIRPSETAGRYVTYRFVV 207
>ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Fragaria vesca subsp. vesca]
Length = 206
Score = 237 bits (605), Expect = 2e-60
Identities = 125/206 (60%), Positives = 147/206 (71%), Gaps = 23/206 (11%)
Frame = -2
Query: 695 MAAPEEEITRLFRIRKTVMQMLKDREYFVTDYEIEMKKHQFIEKYGENLKREDLVINKTK 516
M EEEI RL+R+RKTVMQMLKDR+Y + D+++ M QF KYGE++KREDL IN+ K
Sbjct: 1 MVLTEEEIMRLYRVRKTVMQMLKDRDYLIVDHDLNMTMSQFKNKYGEHMKREDLTINRRK 60
Query: 515 RGN-NEQIYVFFPEEAKVGVKTLKTYTNRMKSENVSRAILV------------------- 396
RG+ ++QIYVFFP+E KVGVKT+K+Y RM ENV RAILV
Sbjct: 61 RGDESDQIYVFFPDEPKVGVKTMKSYITRMNQENVIRAILVAQQNLTPFAKTSISEMGSK 120
Query: 395 ---XXXXXXXXXXXXKEHVLVPEHQILKDDEKKTLLARYTVKETQLPRIQVSDPIARYYG 225
KEHVLVPEH++L ++EKKTLL RYTVKETQLPRIQ+ DPIARYYG
Sbjct: 121 YHLEIFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQLIDPIARYYG 180
Query: 224 LKRGDVVKIIRPSETAGRYVTYRFVI 147
LKRG VVKIIRPSETAGRYVTYR+VI
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206