BLASTX nr result

ID: Paeonia24_contig00007014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00007014
         (309 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    43   3e-07
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    40   4e-07

>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 43.1 bits (100), Expect(2) = 3e-07
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +3

Query: 189 PPKQSTFLTRLANQKLPTEDKLQTRGIPLASCCCIC 296
           PP+ S    R+ + KLPT+D+LQ RGIP  S C +C
Sbjct: 480 PPRYSVLAWRIFHLKLPTDDQLQRRGIPFVSVCQLC 515



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +1

Query: 1   LPTPLVQAFPDI*DRIHKNTIATTPTQDTLIWTDSPNSSFHFKDLFH----HPPSNHWIK 168
           LP+     FPD   +I +  +  TP  D LIW  S +  F F D +     +     W  
Sbjct: 413 LPSHFSNLFPDCAKQILEIPLPNTPESDILIWEHSSSGIFSFSDGYELVRPYFEKLDWAS 472

Query: 169 SFWNKVIP 192
           S W+  IP
Sbjct: 473 SVWHSFIP 480


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 40.4 bits (93), Expect(2) = 4e-07
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +1

Query: 40  DRIHKNTIATTPTQDTLIWTDSPNSSFHFKDLFH----HPPSNHWIKSFWNKVIP 192
           ++IH+  +    T D LIWTDS +     K  F     H P+ HW K  WN   P
Sbjct: 27  EKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTP 81



 Score = 39.3 bits (90), Expect(2) = 4e-07
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 168 KLLEQGHPPKQSTFLT-RLANQKLPTEDKLQTRGIPLAS-CCCIC 296
           K+L   + P    F+T R  + KLPT+D L+ RG  + S CCC C
Sbjct: 73  KMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFC 117


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