BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00006693
         (2096 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   987   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              972   0.0  
ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   957   0.0  
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   946   0.0  
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   943   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   942   0.0  
ref|XP_007030611.1| Pseudouridine synthase family protein, putat...   931   0.0  
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   925   0.0  
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   920   0.0  
ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prun...   917   0.0  
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   914   0.0  
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   910   0.0  
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   906   0.0  
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   903   0.0  
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   896   0.0  
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   896   0.0  
gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus...   894   0.0  
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata...   882   0.0  
ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Caps...   879   0.0  
ref|XP_006408145.1| hypothetical protein EUTSA_v10022286mg, part...   874   0.0  

>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  987 bits (2551), Expect = 0.0
 Identities = 508/693 (73%), Positives = 564/693 (81%), Gaps = 21/693 (3%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKE 226
            MK L+ESDVGI  YIS+LPGFRGILKQRY DFIVNEVDS+GNVVHLTSLDAPPE  E+ E
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 227  TEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHR 406
            T+I DQS    Y SEIE FRSLVGD D ECLK  IDQ++SG+ED           DK HR
Sbjct: 61   TKISDQSNKG-YASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHR 119

Query: 407  TAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRG 586
            TAVHNFFKE  KFLVTDTIDGPD  SKCIRVRLNSGG +   +NS+KRKDR DKPFDSRG
Sbjct: 120  TAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRG 179

Query: 587  SENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVF 766
            S+NW EHVGKFLRFHLYKENK+TQEA+ LIGKMLG+QPRSFGFAGTKDKRSVSTQRVTVF
Sbjct: 180  SDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVF 239

Query: 767  KQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADS 946
            KQHA RLA+LN RLIGIKVGDFCHV+EGL LGQLLGNRFT+TLRGV+ADS++ IKASAD+
Sbjct: 240  KQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADA 299

Query: 947  LGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYK 1126
            LG  GFINYFGLQRFGSGSVPT+LIGA LLRGEW  AVS+ILDPREGERD +RK REYYK
Sbjct: 300  LGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYK 359

Query: 1127 ETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHA 1306
            E+DDIEGTLRQ PR+LVAERAIL  LKK PG+YLQALKAIPRTLRMMYVHSYQSYLWNHA
Sbjct: 360  ESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 419

Query: 1307 ASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIADLP 1486
            AS+RVQ YG  Q V+GDLVYCK ++  KVT +V SE  DD  +DA+D  H DEI   DLP
Sbjct: 420  ASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLP 479

Query: 1487 EEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTESV 1666
            EE+++ VKA+ AEDLLTGNYT+ DV+LPLPGSRAIYP NDIA+VYH+ AKKD ISLTES 
Sbjct: 480  EERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESA 539

Query: 1667 HNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKP-------- 1822
            H+VKEFSITNMTG FRRVFQKP+DFEWELLTYT+GNIPLAETD D + KSKP        
Sbjct: 540  HSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGED 599

Query: 1823 VREGNEDENISLIPLEKTESLE-------INGKHNNGTECDRELKQAQ------ESQLAL 1963
             R GNE EN S   ++++ES E        N + N  TE      + Q      E+Q AL
Sbjct: 600  SRNGNEKEN-SFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRAL 658

Query: 1964 KLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            KL+FTLP+SCYATMAIRELLKTSTSVAF KTLN
Sbjct: 659  KLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 691


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  972 bits (2512), Expect = 0.0
 Identities = 504/693 (72%), Positives = 561/693 (80%), Gaps = 21/693 (3%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKE 226
            MK L+ESDVGI  YIS+LPGFRGILKQRY DFIVNEVDS+GNVVHLTSLDAPPE  E+ E
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 227  TEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHR 406
            T+I DQS    Y SEIE FRSLVGD D ECLK  IDQ++SG+ED           DK HR
Sbjct: 61   TKISDQSNKG-YASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHR 119

Query: 407  TAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRG 586
            TAVHNFFKE  KFLVTDTIDGPD  SKCIRVRLNSGG +   +NS+KRKDR DKPFDSRG
Sbjct: 120  TAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRG 179

Query: 587  SENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVF 766
            S+NW EHVGKFLRFHLYKENK+TQEA+ LIGKMLG+QPRSFGFAGTKDKRSVSTQRVTVF
Sbjct: 180  SDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVF 239

Query: 767  KQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADS 946
            KQHA RLA+LN RLIGIKVGDFCHV+EGL LGQLLGNRFT+TLRGV+ADS++ IKASAD+
Sbjct: 240  KQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADA 299

Query: 947  LGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYK 1126
            LG  GFINYFGLQRFGSGSVPT+LIGA LLRGEW  AVS+ILDPREG+   + K REYYK
Sbjct: 300  LGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGD-ILLLKAREYYK 358

Query: 1127 ETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHA 1306
            E+DDIEGTLRQ PR+LVAERAIL  LKK PG+YLQALKAIPRTLRMMYVHSYQSYLWNHA
Sbjct: 359  ESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 418

Query: 1307 ASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIADLP 1486
            AS+RVQ YG  Q V+GDLVYCK ++  KVT +V SE  DD  +DA+D  H DEI   DLP
Sbjct: 419  ASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLP 478

Query: 1487 EEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTESV 1666
            EE+++ VKA+ AEDLLTGNYT+ DV+LPLPGSRAIYP NDIA+VYH+ AKKD ISLTES 
Sbjct: 479  EERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESA 538

Query: 1667 HNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKP-------- 1822
            H+VKEFSITNMTG FRRVFQKP+DFEWELLTYT+GNIPLAETD D + KSKP        
Sbjct: 539  HSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGED 598

Query: 1823 VREGNEDENISLIPLEKTESLE-------INGKHNNGTECDRELKQAQ------ESQLAL 1963
             R GNE EN S   ++++ES E        N + N  TE      + Q      E+Q AL
Sbjct: 599  SRNGNEKEN-SFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRAL 657

Query: 1964 KLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            KL+FTLP+SCYATMAIRELLKTSTSVAF KTLN
Sbjct: 658  KLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  957 bits (2475), Expect = 0.0
 Identities = 489/693 (70%), Positives = 565/693 (81%), Gaps = 21/693 (3%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKE 226
            M  + ESDVGILC+IS LPGFRGILKQRYSDFIVNEVD+EGNVVHLTSLDAPPE  +E E
Sbjct: 43   MTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPPEAVQEGE 102

Query: 227  TEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHR 406
            T+  DQ  + CY SEI  FRSL GD DA+ L+AFI+QI+SG E+           DK HR
Sbjct: 103  TKTPDQL-NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHR 161

Query: 407  TAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRG 586
            TA+HNFFKE  +FLVTDT+DGPD+ SKCIRVRLNSG +NK  +NSKKRK+RGDKP+DSRG
Sbjct: 162  TAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNK-GRNSKKRKERGDKPYDSRG 220

Query: 587  SENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVF 766
            S +WPEH+GKFLRFHLYKENK+TQEAL LIGKMLG+QPRSFGFAGTKDKRSVSTQRVTVF
Sbjct: 221  SSHWPEHLGKFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVF 280

Query: 767  KQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADS 946
            KQHA RLA+LN RLIGIKVGDFC+VK+   LGQLLGNRFT+ LRG++ADS++ IKAS +S
Sbjct: 281  KQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVES 340

Query: 947  LGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYK 1126
            LG +GFINYFGLQRFGSGS+PT+ IGATLLRGEW+AA S ILDPREGERD V K REYYK
Sbjct: 341  LGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGERDFVSKAREYYK 400

Query: 1127 ETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHA 1306
            ET DIEGTLRQLPR+LVAERA+L  LKKCPG+YLQALKAIPRTLRMMYVHSYQSYLWNHA
Sbjct: 401  ETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 460

Query: 1307 ASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIADLP 1486
            AS+RV+KYG ++ V+GDLVYCK     KV  +V SE  D++  DAYDC  LDEI   DLP
Sbjct: 461  ASMRVEKYGSNEVVLGDLVYCKGNDAEKVK-VVPSEHEDNNFEDAYDCSQLDEISGTDLP 519

Query: 1487 EEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTESV 1666
            E K+NLVKA++A D+ TGNYT+ DV+LP+PGSR IYP+NDIA VYH++AKKDGISLTESV
Sbjct: 520  EGKNNLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESV 579

Query: 1667 HNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVR------ 1828
            HN+KEFSIT+MTG++RRVFQKP+DFEWELL+YTDG+I L+ETDLD + K+KPV       
Sbjct: 580  HNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEK 639

Query: 1829 --EGNEDENISLIPLEKTESLEINGKHNNG---TECDRELKQAQ----------ESQLAL 1963
              +G E ++ S   +E  ES E + K + G    E  RE +  Q           +Q AL
Sbjct: 640  PTDGTEGQD-SSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKAL 698

Query: 1964 KLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            KLAFTLP+SCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 699  KLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 731


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  946 bits (2444), Expect = 0.0
 Identities = 486/696 (69%), Positives = 559/696 (80%), Gaps = 24/696 (3%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIA--EE 220
            MK +DESD GILC+IS LPGFRGILKQRY DFIVNEVD++  VVHLTSLD PPE A  E 
Sbjct: 45   MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH 104

Query: 221  KETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGV-EDXXXXXXXXXXXDK 397
             ET+  DQ   S Y SEIESFRSL GD DA+CL+  I+Q++SG  ED           DK
Sbjct: 105  NETKASDQLNRS-YASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDK 163

Query: 398  LHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKR-AKNSKKRKDRGDKPF 574
             HRTA+HNFFK+ FKFLVTDT+DGPDA SKCIRVRLNSGG+N    +NSKKRK+RGD PF
Sbjct: 164  SHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRKERGDNPF 223

Query: 575  DSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQR 754
            DSRGSENWPE +GKFLRFHLYKENK+TQEAL LI KMLG+ PRSFGFAGTKDKRSVSTQR
Sbjct: 224  DSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQR 283

Query: 755  VTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKA 934
            VTVFKQ A +LA+LN+RLIGI++GDFC+VKEGL LGQLLGNRFT+TLRGV+ DS+D+IKA
Sbjct: 284  VTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKA 343

Query: 935  SADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTR 1114
            SA+SLG NGFINYFGLQRFGSGSVPT+L+GATLLRGEW++AV MILDPREGER+ + K R
Sbjct: 344  SANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAR 403

Query: 1115 EYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYL 1294
            EYYKETDDI+GTLR+LPR+LVAERAIL  LKKCPG+YLQALKAIPRTLRMMYVHSYQS+L
Sbjct: 404  EYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFL 463

Query: 1295 WNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPI 1474
            WNHAAS RVQK+G +  V+GDLV+CK +   K  G V  E   +S NDA D  HLDE+P 
Sbjct: 464  WNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPE 523

Query: 1475 ADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISL 1654
             D P+ + NLVK V+AED+ +G YT+ DV+LPLPGSR IYPMND+AEVYH+LA+KDGI+L
Sbjct: 524  TDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINL 583

Query: 1655 TESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVREG 1834
            TES+HNVKEFSIT+MTG +RRVFQKPMDFEWELLTY DGN PLAETDLD + K K     
Sbjct: 584  TESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIV 643

Query: 1835 NEDE----NISLIP---LEKTESLEINGK---HNNGTECDRELKQ----------AQESQ 1954
             E+E    N    P   ++++ESL  + K    NN   C +E+KQ          +Q  Q
Sbjct: 644  KEEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQ 703

Query: 1955 LALKLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            +ALKL  TLPSSCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 704  MALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  943 bits (2438), Expect = 0.0
 Identities = 481/697 (69%), Positives = 553/697 (79%), Gaps = 18/697 (2%)
 Frame = +2

Query: 5    ICNITT---RYSEAPPAMKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNV 175
            +CN TT    +     AMK LDESDVGI CYIS LPGFRGILKQRYSDFIVNEVD++GNV
Sbjct: 43   LCNYTTIAASHKALTTAMKTLDESDVGIFCYISNLPGFRGILKQRYSDFIVNEVDTDGNV 102

Query: 176  VHLTSLDAPPEIAEEKETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVE 355
            VHLTSLDAPPE  EE  TE  D    S YTSEIESFR L GD DAE L+A I+QI+SG  
Sbjct: 103  VHLTSLDAPPETREETRTETIDAGTKS-YTSEIESFRCLAGDSDAESLEALINQINSGGG 161

Query: 356  DXXXXXXXXXXXDKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAK 535
            +           DK HRT +HNFFK+ FKFLVTDT+DGPDA SKCIRVRLNSG HN   +
Sbjct: 162  EEVSPIVLSPSSDKSHRTEIHNFFKKNFKFLVTDTVDGPDASSKCIRVRLNSGRHNNHGR 221

Query: 536  NSKKRKDRGDKPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGF 715
            NSKKRK+RGDKPFD RGS++WPEHVGKFLRFHLYKENK++QEAL LIGKMLG+QPRSFGF
Sbjct: 222  NSKKRKERGDKPFDRRGSDDWPEHVGKFLRFHLYKENKDSQEALGLIGKMLGIQPRSFGF 281

Query: 716  AGTKDKRSVSTQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTL 895
            AGTKDKRSVSTQRVTVFKQ A RLA+LN RLIGI+VGDFC+VKE L LGQL GNRFTVTL
Sbjct: 282  AGTKDKRSVSTQRVTVFKQRASRLAALNDRLIGIQVGDFCYVKEELVLGQLSGNRFTVTL 341

Query: 896  RGVIADSKDIIKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILD 1075
            RGV+ADS++ IKASA +LG  GFINYFGLQRFGSGSVPTYLIGA L RGEW+ AV MILD
Sbjct: 342  RGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVPTYLIGAMLFRGEWKDAVHMILD 401

Query: 1076 PREGE--RDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIP 1249
            PREG+   D + K REYYKET+DI+GTLRQLPR+LVAE AIL  LKKCPG+YLQALKAIP
Sbjct: 402  PREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAENAILQCLKKCPGNYLQALKAIP 461

Query: 1250 RTLRMMYVHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDS 1429
            RTLRMMYVHSYQSYLWNHAAS RVQKYG DQ V+GDLV+CKE +I KV G  +++C D+ 
Sbjct: 462  RTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLVFCKEHNIEKVKGTASADCKDED 521

Query: 1430 LNDAYDCDHLDEIPIADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDI 1609
             N  +    +DE+  A+LPEE++N VK V+AED+L GN+ + DV+LPLPGSR I P NDI
Sbjct: 522  SNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGNFAIDDVVLPLPGSRVILPTNDI 581

Query: 1610 AEVYHNLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAE 1789
            A+VYH+LAKKD ISLTES HNVKEFSIT+MTG++RRVFQKP+D+EWELLTYT+G IPLAE
Sbjct: 582  AQVYHDLAKKDAISLTESAHNVKEFSITSMTGSYRRVFQKPVDYEWELLTYTNGTIPLAE 641

Query: 1790 TDLDTVGKSKPVREGNEDE----NISLIPLEKTESLEINGKHNNGTECDRELK------- 1936
            TDLD + KSKP     E+E      S    ++ E+  +    +N  + +RE +       
Sbjct: 642  TDLDIIAKSKPAHVAEENEVNGNEESTKRSKRVENEAVLQTDDNKVDGEREAELQAESTC 701

Query: 1937 --QAQESQLALKLAFTLPSSCYATMAIRELLKTSTSV 2041
               +QE Q+ALKL+FTLP+SCYATMAIRELLKTSTSV
Sbjct: 702  GTNSQEPQMALKLSFTLPASCYATMAIRELLKTSTSV 738


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  942 bits (2435), Expect = 0.0
 Identities = 480/710 (67%), Positives = 565/710 (79%), Gaps = 28/710 (3%)
 Frame = +2

Query: 17   TTRYSEAPPAMKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLD 196
            T+R     P+  +++ESDVGILCYIS+LPGFRGILKQRY+DFIVNEVD++GNVVHLT L+
Sbjct: 42   TSRVPVPVPSTASMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLE 101

Query: 197  APPEIAEEKE---TEIYDQ--SKDSCYTSEIESFRSLVGDIDAECLKAFIDQISS--GVE 355
             PP++ EE +    ++ D+  S+   Y +EIE FRSL GD DAE L++ I Q+ S  G E
Sbjct: 102  PPPQMVEETKECGAKVSDEKMSESKSYEAEIELFRSLAGDSDAEKLESLISQVDSCTGSE 161

Query: 356  DXXXXXXXXXXXDKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAK 535
            D           DK HRTAVHNFFK+ FKFLVTDT DGPDA SKCIRVRL+SGGH    +
Sbjct: 162  DSVPHIVLSPDSDKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGR 221

Query: 536  NSKKRKDRGDKPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGF 715
            NSKKRK+RG+KPFDSRGS NWPEH+GKFLRFHLYKENK+TQEAL +IGKMLG+Q +SFGF
Sbjct: 222  NSKKRKERGEKPFDSRGSSNWPEHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGF 281

Query: 716  AGTKDKRSVSTQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTL 895
            AGTKDKR+VSTQRVTVFKQ A RLA+LN RLIGIKVGDFCHVKEGL LG+LLGNRFTVTL
Sbjct: 282  AGTKDKRAVSTQRVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTL 341

Query: 896  RGVIADSKDIIKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILD 1075
            RGVIADS+D IKA+ADSLG +GFINYFGLQRFG+GSVPT+LIGA LLRGEW+ AVSMILD
Sbjct: 342  RGVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILD 401

Query: 1076 PREGE-----RDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALK 1240
            PREG+        +RK REYYKE++DIEGTLRQLPR+LVAERA+L  LKKCPGDYLQA+K
Sbjct: 402  PREGDILLLFPYVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMK 461

Query: 1241 AIPRTLRMMYVHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECV 1420
            AIPRTLRMMYVH YQSYLWNHAAS RVQKYGFDQ ++GDLVYCK +   K T  V SEC 
Sbjct: 462  AIPRTLRMMYVHGYQSYLWNHAASERVQKYGFDQVLLGDLVYCKGDDSEKETVGVNSECN 521

Query: 1421 DDSLNDAYDCDHLDEIPIADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPM 1600
            DD+ +D YDC HLDE    DL E K+ LVK V+ ED+ TGNYTV DV+LP+PGSR I+P 
Sbjct: 522  DDNCDDTYDCSHLDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPT 581

Query: 1601 NDIAEVYHNLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIP 1780
            N+IA+VYH+LAKKD I+LTESVH VKEFSIT+MTG++RRVFQKP+DFEWELLTY D N P
Sbjct: 582  NEIAKVYHDLAKKDAINLTESVHRVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKP 641

Query: 1781 LAETDLDTVGKSKPVR--------EGNEDENIS---LIPLEKTESLEINGKHNNGTECDR 1927
            LAETDLD + K+            +G+ED ++S    +P+    S+ ++   N  +E + 
Sbjct: 642  LAETDLDKISKTGSTNIIKQEEQGKGDEDNDLSDCTKLPVCSRNSIALSSDTNEESEREV 701

Query: 1928 ELKQA-----QESQLALKLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            E +Q      QE+Q+ALKL+ TLP+SCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 702  ESEQVSGSNWQETQMALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLN 751


>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508719216|gb|EOY11113.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 763

 Score =  931 bits (2407), Expect = 0.0
 Identities = 485/724 (66%), Positives = 565/724 (78%), Gaps = 52/724 (7%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEI----- 211
            M  + ESDVGILC+IS LPGFRGILKQRYSDFIVNEVD+EGNVVHLTSLDAPPE+     
Sbjct: 43   MTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPPEVMIDVF 102

Query: 212  --------AEEKETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXX 367
                     +E ET+  DQ  + CY SEI  FRSL GD DA+ L+AFI+QI+SG E+   
Sbjct: 103  SLNKFTQAVQEGETKTPDQL-NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDIC 161

Query: 368  XXXXXXXXDKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKK 547
                    DK HRTA+HNFFKE  +FLVTDT+DGPD+ SKCIRVRLNSG +NK  +NSKK
Sbjct: 162  PIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNK-GRNSKK 220

Query: 548  RKDRGDKPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTK 727
            RK+RGDKP+DSRGS +WPEH+GKFLRFHLYKENK+TQEAL LIGKMLG+QPRSFGFAGTK
Sbjct: 221  RKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTK 280

Query: 728  DKRSVSTQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVI 907
            DKRSVSTQRVTVFKQHA RLA+LN RLIGIKVGDFC+VK+   LGQLLGNRFT+ LRG++
Sbjct: 281  DKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIV 340

Query: 908  ADSKDIIKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREG 1087
            ADS++ IKAS +SLG +GFINYFGLQRFGSGS+PT+ IGATLLRGEW+AA S ILDPREG
Sbjct: 341  ADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREG 400

Query: 1088 E------------------RDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKC 1213
            +                    T ++ REYYKET DIEGTLRQLPR+LVAERA+L  LKKC
Sbjct: 401  DILSLTFFFPFLLGKALFRCLTTQRAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKC 460

Query: 1214 PGDYLQALKAIPRTLRMMYVHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKV 1393
            PG+YLQALKAIPRTLRMMYVHSYQSYLWNHAAS+RV+KYG ++ V+GDLVYCK     KV
Sbjct: 461  PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKV 520

Query: 1394 TGLVASECVDDSLNDAYDCDHLDEIPIADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPL 1573
              +V SE  D++  DAYDC  LDEI   DLPE K+NLVKA++A D+ TGNYT+ DV+LP+
Sbjct: 521  K-VVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVLPM 579

Query: 1574 PGSRAIYPMNDIAEVYHNLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWEL 1753
            PGSR IYP+NDIA VYH++AKKDGISLTESVHN+KEFSIT+MTG++RRVFQKP+DFEWEL
Sbjct: 580  PGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWEL 639

Query: 1754 LTYTDGNIPLAETDLDTVGKSKPVR--------EGNEDENISLIPLEKTESLEINGKHNN 1909
            L+YTDG+I L+ETDLD + K+KPV         +G E ++ S   +E  ES E + K + 
Sbjct: 640  LSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQD-SSDHMEHIESFEDDKKFST 698

Query: 1910 G---TECDRELKQAQ----------ESQLALKLAFTLPSSCYATMAIRELLKTSTSVAFH 2050
            G    E  RE +  Q           +Q ALKLAFTLP+SCYATMAIRELLKTSTSVAFH
Sbjct: 699  GNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFH 758

Query: 2051 KTLN 2062
            KTLN
Sbjct: 759  KTLN 762


>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  925 bits (2391), Expect = 0.0
 Identities = 465/691 (67%), Positives = 556/691 (80%), Gaps = 24/691 (3%)
 Frame = +2

Query: 62   ESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKETEIYD 241
            ES+VGI CYIS LPGFRGILKQRYSDF+VNEVD EGNVVHLT+L+APPE+ +E   +  D
Sbjct: 5    ESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTED 64

Query: 242  Q-SKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHRTAVH 418
              SKD  Y++EIE FR L    D E L+AFI +++SG ED           DK+HRTAVH
Sbjct: 65   AASKD--YSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAVH 122

Query: 419  NFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRGSENW 598
            NFFKE  KFLVTD +DGPDA SKCIRVRLNSGG N R +NSKKRK+RGDKPFDSRG ++W
Sbjct: 123  NFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDW 182

Query: 599  PEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVFKQHA 778
             EHVGKFLRFHL+KENK+TQEAL +IGKMLG+QPR+FGFAGTKDKR+V+ QRVTVFKQ A
Sbjct: 183  SEHVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFA 242

Query: 779  QRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADSLGSN 958
             RLA+LN RLIGIKVGDFC+VKEGL LGQLLGNRFT+TLRGV+ADS+DII+ASA++LG  
Sbjct: 243  SRLAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQ 302

Query: 959  GFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYKETDD 1138
            GF+NYFGLQRFGSGS+PT+LIGA+LLRGEW++ VSM+L+PREGERD + + R+YYKE++D
Sbjct: 303  GFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESND 362

Query: 1139 IEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHAASLR 1318
            I+GTLR+LPRYLVAERA+L  LKKCPG+Y QALKA+PRTLRMMYVHSYQSYLWNHAAS+R
Sbjct: 363  IDGTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMR 422

Query: 1319 VQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLN-----DAYDCDHLDEIPIADL 1483
            VQKYG D+ V+GDLVYCK     KVTG+V+SECVD+++N     D +D +HLD+I   ++
Sbjct: 423  VQKYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNV 482

Query: 1484 PEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTES 1663
            PE + +LVKAV+AED+  G YT+ D++LPLPGSR I+P NDIA V+H+LAKKDGISLTES
Sbjct: 483  PEARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTES 542

Query: 1664 VHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVREGNE- 1840
            VHNVKEFSITN+TG++RRVFQKP+DFEW++L Y DGNIPL ETD + + K+KPV    E 
Sbjct: 543  VHNVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEY 602

Query: 1841 ----DENISLIPLEKTESLEING----KHNNGTECDRELKQAQES---------QLALKL 1969
                  + SL    K     +N     K +N  E + E     ES         Q+ALKL
Sbjct: 603  PTGVSGDGSLHDRIKQSECSVNDVQLPKKDNEVESEGEKLPHVESLGGPIPQGTQIALKL 662

Query: 1970 AFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            +FTLP+SCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 663  SFTLPASCYATMAIRELLKTSTSVAFHKTLN 693


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  920 bits (2379), Expect = 0.0
 Identities = 477/690 (69%), Positives = 551/690 (79%), Gaps = 24/690 (3%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIA--EE 220
            MK +DESD GILC+IS LPGFRGILKQRY DFIVNEVD++  VVHLTSLD PPE A  E 
Sbjct: 1    MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH 60

Query: 221  KETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGV-EDXXXXXXXXXXXDK 397
             ET+  DQ   S Y SEIESFRSL GD DA+CL+  I+Q++SG  ED           DK
Sbjct: 61   NETKASDQLNRS-YASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDK 119

Query: 398  LHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKR-AKNSKKRKDRGDKPF 574
             HRTA+HNFFK+ FKFLVTDT+DGPDA SKCIRVRLNSGG+N    +NSKKRK+RGD PF
Sbjct: 120  SHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRKERGDNPF 179

Query: 575  DSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQR 754
            DSRGSENWPE +GKFLRFHLYKENK+TQEAL LI KMLG+ PRSFGFAGTKDKRSVSTQR
Sbjct: 180  DSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQR 239

Query: 755  VTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKA 934
            VTVFKQ A +LA+LN+RLIGI++GDFC+VKEGL LGQLLGNRFT+TLRGV+ DS+D+IKA
Sbjct: 240  VTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKA 299

Query: 935  SADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTR 1114
            SA+SLG NGFINYFGLQRFGSGSVPT+L+GATLLRGEW++AV MILDPREG+   + K R
Sbjct: 300  SANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGDI-LLFKAR 358

Query: 1115 EYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYL 1294
            EYYKETDDI+GTLR+LPR+LVAERAIL  LKKCPG+YLQALKAIPRTLRMMYVHSYQS+L
Sbjct: 359  EYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFL 418

Query: 1295 WNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPI 1474
            WNHAAS RVQK+G +  V+GDLV+CK +   K  G V  E   +S NDA D  HLDE+P 
Sbjct: 419  WNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPE 478

Query: 1475 ADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISL 1654
             D P+ + NLVK V+AED+ +G YT+ DV+LPLPGSR IYPMND+AEVYH+LA+KDGI+L
Sbjct: 479  TDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINL 538

Query: 1655 TESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVREG 1834
            TES+HNVKEFSIT+MTG +RRVFQKPMDFEWELLTY DGN PLAETDLD + K K     
Sbjct: 539  TESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIV 598

Query: 1835 NEDE----NISLIP---LEKTESLEINGK---HNNGTECDRELKQ----------AQESQ 1954
             E+E    N    P   ++++ESL  + K    NN   C +E+KQ          +Q  Q
Sbjct: 599  KEEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQ 658

Query: 1955 LALKLAFTLPSSCYATMAIRELLKTSTSVA 2044
            +ALKL  TLPSSCYATMAIRELLKTSTSV+
Sbjct: 659  MALKLGLTLPSSCYATMAIRELLKTSTSVS 688


>ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
            gi|462403828|gb|EMJ09385.1| hypothetical protein
            PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  917 bits (2369), Expect = 0.0
 Identities = 474/683 (69%), Positives = 551/683 (80%), Gaps = 18/683 (2%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKE 226
            MK  +E DVGI CYIS+LPGFRGILKQRYSDF+VNEVD+E NVVHLT+LDAP E  +E E
Sbjct: 1    MKTTEEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVKEIE 60

Query: 227  TEIYDQ-SKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLH 403
            T+ +D  SKD  YT+EIESFRSLV   DAE L+A I+QI+SG ED           DK H
Sbjct: 61   TKTHDATSKD--YTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLSPDYDKSH 118

Query: 404  RTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSR 583
            RTAVHNFFKE FKFLVTDT+DGPDA SKCIRVR+NSGG N R +NS+KRK+RGDKPFDSR
Sbjct: 119  RTAVHNFFKENFKFLVTDTVDGPDASSKCIRVRINSGGQNSRGRNSRKRKERGDKPFDSR 178

Query: 584  GSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTV 763
            GS++W E+VGKFLRFHLYKENK+TQEAL +I KMLG+QPRSFGFAGTKDKR+V+TQRVTV
Sbjct: 179  GSDDWSENVGKFLRFHLYKENKDTQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTV 238

Query: 764  FKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASAD 943
            FKQ A RLA+LN RLIGIKVGDFC+VKEGL LGQLLGNRFT+TLRGV+ADS+D IKAS  
Sbjct: 239  FKQLASRLAALNDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVI 298

Query: 944  SLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGE--RDTVRKTRE 1117
            +LG  GFINYFGLQRFGSGSVPT+LIGATLLRGEW++ VS+ LDPREG+     +   RE
Sbjct: 299  ALGKQGFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLGIARE 358

Query: 1118 YYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLW 1297
            YYKET+DIEGTLRQLPR+LV+E+AIL  LKKCPG+YLQALKAIPRTLRMMYVHSYQSYLW
Sbjct: 359  YYKETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 418

Query: 1298 NHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIA 1477
            NHAAS+RVQKYG D+ V+GDLVYCK     KV+ +V+S+CVD++ ND  D   LD+I   
Sbjct: 419  NHAASMRVQKYGTDRVVLGDLVYCKGNETEKVSEVVSSKCVDENGNDTLDPIDLDDISGT 478

Query: 1478 DLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLT 1657
            +LPEE+ NLVKAV+AED+L+GNYT+ DV+LP+PGSR I+P NDIA V+H+LAKKD ISLT
Sbjct: 479  NLPEERLNLVKAVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLT 538

Query: 1658 ESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVREGN 1837
            ESVHNVKEFSIT+MTG++RRVFQKPMDFEWE+L Y DGN PL +TD D + K+KP    N
Sbjct: 539  ESVHNVKEFSITSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTKP-SSLN 597

Query: 1838 EDENISLIPLEKTESLE-------INGKHNNGTECDRELKQA--------QESQLALKLA 1972
            ED  +     +KT+  E       +    N       EL QA        QE+Q ALKL+
Sbjct: 598  EDGRLH----DKTKQSECLDNDIGLQTDDNGAKAKGEELPQAESLCDTNPQETQTALKLS 653

Query: 1973 FTLPSSCYATMAIRELLKTSTSV 2041
            FTLP+SCYATMAIRELLKTSTSV
Sbjct: 654  FTLPASCYATMAIRELLKTSTSV 676


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  914 bits (2361), Expect = 0.0
 Identities = 477/707 (67%), Positives = 549/707 (77%), Gaps = 35/707 (4%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEI---AE 217
            M  ++ESDVGI CYISK+PGFRGILKQRYSDFIVNEVD+ GNVVHLTSL  P EI   AE
Sbjct: 49   MTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAE 108

Query: 218  EKETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXX-- 391
            E+E EI +Q   + Y +EIESFR L GD D + L+AFI+Q+ S  ED             
Sbjct: 109  EREEEITNQVGKN-YAAEIESFRELAGDADTQRLEAFINQVIS--EDNCINISPILLSPD 165

Query: 392  -DKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGH-NKRAKNSKKRKDRGD 565
             DK HRTA HNFFKEK KFLVTDT+DGPDA SKCIRVRLNS G+ N+  +NSKKRKDR D
Sbjct: 166  SDKAHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRND 225

Query: 566  KPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVS 745
            KPFDSRGS++WPEH+GKFLRFHLYKENK+TQEA+ LIGKMLG+QPRSFGFAGTKDKRSVS
Sbjct: 226  KPFDSRGSDHWPEHLGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVS 285

Query: 746  TQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDI 925
            TQRVTVFKQHA RLA+LN RLIGIKVGDFC+V EGL LGQLLGNRFTVTLRGV+ADS+D 
Sbjct: 286  TQRVTVFKQHASRLAALNDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDT 345

Query: 926  IKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGE----- 1090
            IK SADSLG +GFINYFGLQRFGSGSVPT+LIGA LLRGEW+ AVSMILDPREG+     
Sbjct: 346  IKGSADSLGRHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLV 405

Query: 1091 --RDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRM 1264
                 +R  REYYKE+DDI+GTLRQLPRYL AERA+L  LKKCPG+YLQALKAIPRTLRM
Sbjct: 406  ICFMWMRMAREYYKESDDIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRM 465

Query: 1265 MYVHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAY 1444
            MYVHSYQSYLWNHAAS+RVQKYG DQ V+GDLVYCK +   +  G   S C DD   D Y
Sbjct: 466  MYVHSYQSYLWNHAASMRVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMY 525

Query: 1445 DCDHLDEIPIADLPEEKSNLVK---AVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAE 1615
             C +LDE    DL E K  LVK   AV+AEDL TGNYT++DVILP+PGSR  YP NDIA+
Sbjct: 526  GCSNLDETSGTDLSERKDTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAK 585

Query: 1616 VYHNLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETD 1795
            VYH+LA+KD I+L ESVH+ KEFSIT+MTG++RRVFQKPMDFEWE+L+YTDG  PLAETD
Sbjct: 586  VYHDLAEKDAINLAESVHSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETD 645

Query: 1796 LDTVGKSKPVREGNEDE----------NISLIPLEKTESLEINGKHNNGTECDRELKQAQ 1945
            ++ + K+K +    E+E          +    P+     L ++ ++N   E + E+ + +
Sbjct: 646  MEKLAKAKSIELNKEEETKKNDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVE 705

Query: 1946 E--------SQLALKLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
                     +Q ALKL FTLP+SCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 706  PLYGPNTRGAQTALKLTFTLPASCYATMAIRELLKTSTSVAFHKTLN 752


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  910 bits (2353), Expect = 0.0
 Identities = 458/684 (66%), Positives = 549/684 (80%), Gaps = 24/684 (3%)
 Frame = +2

Query: 62   ESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKETEIYD 241
            ES+VGI CYIS LPGFRGILKQRYSDF+VNEVD EGNVVHLT+L+APPE+ +E   +  D
Sbjct: 5    ESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTED 64

Query: 242  Q-SKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHRTAVH 418
              SKD  Y++EIE FR L    D E L+AFI +++SG ED           DK+HRTAVH
Sbjct: 65   AASKD--YSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAVH 122

Query: 419  NFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRGSENW 598
            NFFKE  KFLVTD +DGPDA SKCIRVRLNSGG N R +NSKKRK+RGDKPFDSRG ++W
Sbjct: 123  NFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDW 182

Query: 599  PEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVFKQHA 778
             EHVGKFLRFHL+KENK+TQEAL +IGKMLG+QPR+FGFAGTKDKR+V+ QRVTVFKQ A
Sbjct: 183  SEHVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFA 242

Query: 779  QRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADSLGSN 958
             RLA+LN RLIGIKVGDFC+VKEGL LGQLLGNRFT+TLRGV+ADS+DII+ASA++LG  
Sbjct: 243  SRLAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQ 302

Query: 959  GFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYKETDD 1138
            GF+NYFGLQRFGSGS+PT+LIGA+LLRGEW++ VSM+L+PREGERD + + R+YYKE++D
Sbjct: 303  GFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESND 362

Query: 1139 IEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHAASLR 1318
            I+GTLR+LPRYLVAERA+L  LKKCPG+Y QALKA+PRTLRMMYVHSYQSYLWNHAAS+R
Sbjct: 363  IDGTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMR 422

Query: 1319 VQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLN-----DAYDCDHLDEIPIADL 1483
            VQKYG D+ V+GDLVYCK     KVTG+V+SECVD+++N     D +D +HLD+I   ++
Sbjct: 423  VQKYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNV 482

Query: 1484 PEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTES 1663
            PE + +LVKAV+AED+  G YT+ D++LPLPGSR I+P NDIA V+H+LAKKDGISLTES
Sbjct: 483  PEARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTES 542

Query: 1664 VHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVREGNE- 1840
            VHNVKEFSITN+TG++RRVFQKP+DFEW++L Y DGNIPL ETD + + K+KPV    E 
Sbjct: 543  VHNVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEY 602

Query: 1841 ----DENISLIPLEKTESLEING----KHNNGTECDRELKQAQES---------QLALKL 1969
                  + SL    K     +N     K +N  E + E     ES         Q+ALKL
Sbjct: 603  PTGVSGDGSLHDRIKQSECSVNDVQLPKKDNEVESEGEKLPHVESLGGPIPQGTQIALKL 662

Query: 1970 AFTLPSSCYATMAIRELLKTSTSV 2041
            +FTLP+SCYATMAIRELLKTSTSV
Sbjct: 663  SFTLPASCYATMAIRELLKTSTSV 686


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  906 bits (2342), Expect = 0.0
 Identities = 461/699 (65%), Positives = 549/699 (78%), Gaps = 13/699 (1%)
 Frame = +2

Query: 5    ICNITTRYSEAPPAMKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHL 184
            I  I T +      MK +DE+DVGI C+IS+LPGFRGILKQRY+DFIVNEVD +GNVVHL
Sbjct: 27   IATIATNFE----GMKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHL 82

Query: 185  TSLDAPPEIAEEKETEIYDQSKDSC------YTSEIESFRSLVGDIDAECLKAFIDQISS 346
            TSLD PPE+A ++E    D++K SC      YTS +ESF+S+    DAE L+  I+Q++S
Sbjct: 83   TSLDLPPEMAVKEE----DKAK-SCDNVPQNYTSAVESFKSISSVTDAERLEILINQVTS 137

Query: 347  GVEDXXXXXXXXXXXDKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNK 526
            G +            DK  RTA+HNF KE FKFLVTDT+DGPD+ SKCIRVR+NSG +N 
Sbjct: 138  GTDGEVLPVVLDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGANNN 197

Query: 527  RAKNSKKRKDRGDKPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRS 706
            R   SKKRK+RGDKPFDSRGSE+WPEHVGKFLRFHLYKENK+TQEAL LIGKMLG+QP+S
Sbjct: 198  RGNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKS 257

Query: 707  FGFAGTKDKRSVSTQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFT 886
            FGF+GTKDKRSVSTQRVTVFKQ A +LA+LN+RL GIKVGDFC+VKEGL LGQL+GNRFT
Sbjct: 258  FGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKEGLLLGQLMGNRFT 317

Query: 887  VTLRGVIADSKDIIKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSM 1066
            +TLRGV+ADS++ IK SA+SLG +GFINYFGLQRFGSGSVPT+ +GA LL+GEW+ AV M
Sbjct: 318  ITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAVDM 377

Query: 1067 ILDPREGERDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAI 1246
            ILDPRE ER  V   REYYKET DI+GTLRQLPRYLVAERAIL  LKKCPG+YLQALK I
Sbjct: 378  ILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGI 437

Query: 1247 PRTLRMMYVHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDD 1426
            PRTLRMMYVHSYQSYLWN+AASLRV+ YG  Q V+GDLV  K ++  ++   + SE  ++
Sbjct: 438  PRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKVDAAKRMVDSLTSE-HNE 496

Query: 1427 SLNDAYDCDHLDEIPIADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMND 1606
            S  +A DCD +D+  + DLP E+S+LVK VS EDL  G Y+ SD++LPLPGSR IYP ND
Sbjct: 497  SSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSND 556

Query: 1607 IAEVYHNLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLA 1786
            IAE+YH+LAKKDGISLTES+H VKEFSIT+MTG +RRVFQKP+DFEWELLTYTD N PLA
Sbjct: 557  IAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLA 616

Query: 1787 ETDLDTVGKSKPVREGNEDENISLIPLEKTESLEINGKHN-------NGTECDRELKQAQ 1945
            ETDLD +  +KPV +    E I    ++   +   +G+ N       N  E D     ++
Sbjct: 617  ETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHDSGETNLKDQTDSNEAEKDTGNPDSE 676

Query: 1946 ESQLALKLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            ++Q+ALK+A TLPSSCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 677  QTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  903 bits (2334), Expect = 0.0
 Identities = 464/700 (66%), Positives = 549/700 (78%), Gaps = 17/700 (2%)
 Frame = +2

Query: 14   ITTRYSE-APPAMKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTS 190
            +T R S  A    K++ ESDVGIL YIS LPGFRGILKQRYSDFIVNEVD++GNVVHLTS
Sbjct: 28   LTNRSSSIAVMTTKSVGESDVGILSYISSLPGFRGILKQRYSDFIVNEVDTDGNVVHLTS 87

Query: 191  LDAPPEIAEEKETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXX 370
            LDAPPE+   +       S    Y SEIE FRSL GD DAE L+ F+ QI+SGV D    
Sbjct: 88   LDAPPEVIVSESGPTIVHSTSQSYASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILP 147

Query: 371  XXXXXXXDKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKR 550
                   DK HRTAVHNFFK KFKFLVTDTIDGPD+ SKC+RVR++SG  N R + SKKR
Sbjct: 148  IVFSPDTDKTHRTAVHNFFK-KFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKR 206

Query: 551  KDRGDKPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKD 730
            K+RGDKPFDSRGS+NWPEHVGKFLRFHLYKENK+TQEAL LIGKMLG+Q RSFGFAGTKD
Sbjct: 207  KERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKD 266

Query: 731  KRSVSTQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIA 910
            KRS+STQRVTVFKQHA R+A+LN RLIGIK+G+F +++EGL LGQLLGNRFT+TLRGV+A
Sbjct: 267  KRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA 326

Query: 911  DSKDIIKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGE 1090
            +S+D+IKASA++LG +GFINYFGLQRFGSGSVPT+L+GA+LLRGEW+ AV+MILDPREG+
Sbjct: 327  NSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGD 386

Query: 1091 RDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMY 1270
               + + R+YYKE+DDI+GTL+QLPRYLVAERAIL  LKKCPG+YLQALKAIPRTLRMMY
Sbjct: 387  ILLLMRARDYYKESDDIDGTLKQLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMY 446

Query: 1271 VHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDA--Y 1444
            VHSYQSYLWNHAAS+RVQKYG D+ V+GDLVYCKE          + E  D+   DA  Y
Sbjct: 447  VHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSY 506

Query: 1445 DCDHLDEIPIADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYH 1624
            D  HL+E+    LP E+  LVKAV+A D+L+GN+T+ DV+LPLPGSR +YP NDIAEVY+
Sbjct: 507  DSCHLEEVCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYN 566

Query: 1625 NLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDT 1804
            +LA KD ISLT SVHNVKEFSIT+MTG++RRVFQ+P D+EWEL++Y D N+PLA++DL  
Sbjct: 567  DLATKDSISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHN 626

Query: 1805 VGKSKPV-------------REGNEDENISLIPLEKTESLEINGKHN-NGTECDRELKQA 1942
            + KS+ V              E + D     +  +K   LE  GK N NG       +  
Sbjct: 627  LLKSQSVEISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAGGKENENG-------QGT 679

Query: 1943 QESQLALKLAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            Q+ Q+ALKL+FTLP+S YATMAIRELLKTSTSVAFHKTLN
Sbjct: 680  QDPQMALKLSFTLPASSYATMAIRELLKTSTSVAFHKTLN 719


>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  896 bits (2316), Expect = 0.0
 Identities = 457/689 (66%), Positives = 545/689 (79%), Gaps = 16/689 (2%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKE 226
            MK +DESDVGI CYIS LPGFRGILKQRYSDFIVNEVD + NVVHLT L+AP E +E K+
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSENKD 60

Query: 227  TEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHR 406
              I DQ   S Y +EIESFRSL G+ DA+ LKAFID+++SG +            DK HR
Sbjct: 61   VNISDQLNRS-YVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHR 119

Query: 407  TAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRG 586
            TA+HNFFKE+ KFLVTDTIDG +  SKC+RVRLN+  +N R ++S+KRKDR DK +DSRG
Sbjct: 120  TAIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRG 179

Query: 587  SENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVF 766
            S++WP H+GKFLRFHL+KENK+TQEAL++I KMLG+Q RSFGFAGTKDKR+VSTQRVTVF
Sbjct: 180  SDSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVF 239

Query: 767  KQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADS 946
            KQ A +LA+LN+RLIGIKVGDFCHVKEGL LGQL GNRFT+TLRGV A+S+DIIKASA +
Sbjct: 240  KQQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVA 299

Query: 947  LGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYK 1126
            LG +GFINYFGLQRFGS SVPT+LIGA LLRGEW+AAVS+ILDPREGE++ +   REYYK
Sbjct: 300  LGKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYK 359

Query: 1127 ETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHA 1306
            E+ DI+GTLRQLPRYLVAE+AIL  LK+ PG+YLQALKAIPRTLRMMYVHSYQSYLWNHA
Sbjct: 360  ESGDIDGTLRQLPRYLVAEKAILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 419

Query: 1307 ASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIADLP 1486
            AS+RVQK+GFDQ V+GDLVY KEE   KV     +EC D + N+  D  +LDEI   DLP
Sbjct: 420  ASMRVQKHGFDQVVLGDLVYSKEEY--KVKESFVAECEDVNDNNMDDYSNLDEISETDLP 477

Query: 1487 EEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTESV 1666
            EE++  VK ++ EDL +G Y + DV+LPLPGSR IYP NDI EVY +LA+KD ISLTE+ 
Sbjct: 478  EERNIPVKVINEEDLKSGTYAIDDVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETA 537

Query: 1667 HNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKS--KPVREGNE 1840
            H +KEFSITNMTGA+RRVFQKP DFEWELL+YTDG IPLAETD D +  S    VRE + 
Sbjct: 538  HKIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDP 597

Query: 1841 DENISLIPLEKTESLEINGKHNNGTECDRELK--------------QAQESQLALKLAFT 1978
                  +P + + ++ + G   +G  C+ ++                A+ESQ+ALKL+FT
Sbjct: 598  TNGSKELPAD-SSAISVGGDMLSGKVCEEKINNEAGMQSEKSQSGGNAEESQMALKLSFT 656

Query: 1979 LPSSCYATMAIRELLKTSTSVAFHKTLND 2065
            LP+SCYATMA+RELLKTSTSVAFHK+LND
Sbjct: 657  LPASCYATMAVRELLKTSTSVAFHKSLND 685


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  896 bits (2316), Expect = 0.0
 Identities = 458/689 (66%), Positives = 544/689 (78%), Gaps = 16/689 (2%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPEIAEEKE 226
            MK +DESDVGI CYIS LPGFRGILKQRYSDFIVNEVD + NVVHL SL+AP E +E K+
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAPKECSENKD 60

Query: 227  TEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLHR 406
              I DQ   S Y +EIESFRSL G+ DA+ LKAFID+++SG +            DK HR
Sbjct: 61   VNISDQLNRS-YVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHR 119

Query: 407  TAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDSRG 586
            T +HNFFKE+ KFLVTDTIDG +  SKC+RVRLN+  +N R + S+KRKDR DK +DSRG
Sbjct: 120  TEIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRKRKDRNDKRYDSRG 179

Query: 587  SENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVTVF 766
            S++WP H+GKFLRFHL+KENK+TQEAL++I KMLG+Q RSFGFAGTKDKR+VSTQRVTVF
Sbjct: 180  SDSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVF 239

Query: 767  KQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASADS 946
            KQ A +LA+LN+RLIGIKVGDFCHVKEGL LGQL GNRFT+TLRGV A+S+DIIKASA +
Sbjct: 240  KQQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVA 299

Query: 947  LGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREYYK 1126
            LG +GFINYFGLQRFGS SVPT+LIGA LLRGEW+AAVS+ILDPREGE++T+   REYYK
Sbjct: 300  LGKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNTISTVREYYK 359

Query: 1127 ETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWNHA 1306
            E+ DI+GTLRQLPRYLVAE+AIL SLK+ PG+YLQALKAIPRTLRMMYVHSYQSYLWNHA
Sbjct: 360  ESGDIDGTLRQLPRYLVAEKAILQSLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 419

Query: 1307 ASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIADLP 1486
            AS+RVQK+GFDQ V+GDLVY KE+   KV     +EC D + N+  D  +LDEI   DLP
Sbjct: 420  ASMRVQKHGFDQVVLGDLVYSKEDY--KVKESFVAECEDVNDNNMDDYSNLDEISETDLP 477

Query: 1487 EEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTESV 1666
            EE++  VK ++ EDL +G YT+ DV+LPL GSR IYP NDI EVY +LA+KDGISLTE+ 
Sbjct: 478  EERNIPVKVINEEDLKSGTYTIDDVLLPLSGSRVIYPSNDIGEVYRDLAQKDGISLTETA 537

Query: 1667 HNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKS--KPVREGNE 1840
            H +KEFSITNMTGA+RRVFQKP DFEWELL+YTDG IPLAETD D + KS    V E   
Sbjct: 538  HKIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVKSKVIEEVP 597

Query: 1841 DENISLIPLEKTESLEINGKHNNGTECDRELK--------------QAQESQLALKLAFT 1978
                  +P + + ++ + G   +G  C+  +                A+ESQ+ALKL+FT
Sbjct: 598  SNGSKELPAD-SSAISVGGDMLSGKVCEETINNEAGMQSEKSQSGGNAEESQMALKLSFT 656

Query: 1979 LPSSCYATMAIRELLKTSTSVAFHKTLND 2065
            LP+SCYATMA+RELLKTSTSVAFHK+LND
Sbjct: 657  LPASCYATMAVRELLKTSTSVAFHKSLND 685


>gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus guttatus]
          Length = 691

 Score =  894 bits (2311), Expect = 0.0
 Identities = 455/692 (65%), Positives = 545/692 (78%), Gaps = 20/692 (2%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPP-EIAEEK 223
            M + +ESDVGILCYIS LPGFRGILKQRYSDFIVNEVD +GNVVHLTSL+APP E A EK
Sbjct: 1    MTSAEESDVGILCYISPLPGFRGILKQRYSDFIVNEVDMDGNVVHLTSLEAPPSEAAGEK 60

Query: 224  ETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKLH 403
            + ++ DQ +   Y SEIESFR+LVGD DAE LK FIDQISSGV+            DK H
Sbjct: 61   KEKVADQLEKD-YASEIESFRTLVGDSDAEKLKFFIDQISSGVKTNDESIVLSPSSDKTH 119

Query: 404  RTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSG-GHNKRAKNSKKRKDRGDKPFDS 580
            RTAVHNFFKE+ KFLVTDT+DGPD+ SKCIRVRLNSG  +N R  NS+KRKDRG + +DS
Sbjct: 120  RTAVHNFFKERLKFLVTDTVDGPDSSSKCIRVRLNSGINNNARGNNSRKRKDRGQQQYDS 179

Query: 581  RGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVT 760
            RG+++WP++ GKFLRF+LYKENK+TQEAL ++GKM+G+QPRSFGFAGTKDKRSVSTQRVT
Sbjct: 180  RGTDSWPDNTGKFLRFYLYKENKDTQEALGILGKMIGVQPRSFGFAGTKDKRSVSTQRVT 239

Query: 761  VFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASA 940
            VFKQ A +LA+LN RL GIKVG+FC+V E L LG+L GNRFT+TLR V +D +DII+ASA
Sbjct: 240  VFKQRASKLAALNDRLFGIKVGNFCYVDEELVLGKLQGNRFTITLRSVSSDVEDIIRASA 299

Query: 941  DSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREY 1120
             +LG+NGFINYFGLQRFGS S+PT+LIGA LLRGEW+AAVSMILDPREGE+D  R  REY
Sbjct: 300  TALGNNGFINYFGLQRFGSSSIPTHLIGAALLRGEWKAAVSMILDPREGEKDVTRTIREY 359

Query: 1121 YKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWN 1300
            YKE+ DIEGTLRQLPR+LVAER+IL   +K PG+YLQAL AIPRTLRMM+VHSYQSYLWN
Sbjct: 360  YKESGDIEGTLRQLPRHLVAERSILYCFQKNPGNYLQALLAIPRTLRMMFVHSYQSYLWN 419

Query: 1301 HAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIAD 1480
            HAAS+RVQKYG  Q V+GDLVYCK++ I K T    SEC D + ND +D  H+DE+ + D
Sbjct: 420  HAASMRVQKYGMHQVVLGDLVYCKDQEIEKETKFSNSECEDGNGNDTHDDCHVDELSVID 479

Query: 1481 LPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTE 1660
            L E ++ +VK +S ED+  G YT+ D++LPLPGSR  YP+NDI ++YH++A+KD ISLT+
Sbjct: 480  LSEARNTVVKVISEEDIAAGTYTIDDIVLPLPGSRITYPLNDIGKIYHDIARKDNISLTD 539

Query: 1661 SVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKP---VRE 1831
              HN KEFS T++TGA+RRVFQKP DFEWELL YTD NIPLAETDLD + KS     V +
Sbjct: 540  GAHNSKEFSFTSITGAYRRVFQKPKDFEWELLKYTDANIPLAETDLDIIAKSGTSTCVGD 599

Query: 1832 GNEDENISLIP--LEKTESLEINGKHNNGTECDRELKQ-------------AQESQLALK 1966
             N+ E I L        E+L+   + + G+E    +++             A ESQ+ALK
Sbjct: 600  SNDKEQIKLQNGCSSTPENLDDKIERSTGSEETERVREEDIHIEESLGAPKALESQMALK 659

Query: 1967 LAFTLPSSCYATMAIRELLKTSTSVAFHKTLN 2062
            L+FTLPSSCYATMAIRELLKTSTSVAFHK +N
Sbjct: 660  LSFTLPSSCYATMAIRELLKTSTSVAFHKAMN 691


>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
            gi|297330312|gb|EFH60731.1| pseudouridylate synthase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  882 bits (2279), Expect = 0.0
 Identities = 455/682 (66%), Positives = 531/682 (77%), Gaps = 10/682 (1%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQR-YSDFIVNEVDSEGNVVHLTSLDAPPE--IAE 217
            M  +DE+DVGI C+IS+LPGFRGILKQR Y+DFIVNEVD +GNVVHLTSLD PPE  + E
Sbjct: 37   MTTVDEADVGISCFISQLPGFRGILKQRSYADFIVNEVDIDGNVVHLTSLDLPPEMDVKE 96

Query: 218  EKETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDK 397
            E +T+  D    + YTS IESFRS+    DAE L+  I+Q++SG +D           DK
Sbjct: 97   EDKTKTSDNVPQN-YTSAIESFRSISSVTDAERLETLINQVTSGTDDEISPVVLDPSSDK 155

Query: 398  LHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFD 577
              RTA+HNF KE FKFLVTDT+DGPD+ SKCIRVR+NSG HN R   SKKRK+RGDKPFD
Sbjct: 156  SKRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFD 215

Query: 578  SRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRV 757
            SRGSE+WPEHVGKFLRFHLYKENK+TQEAL LIGKMLG+QP+SFGF+GTKDKRSVSTQRV
Sbjct: 216  SRGSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRV 275

Query: 758  TVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKAS 937
            TVFKQ A +LA+LN+RL GIKVGDFCHVKEGL LGQL+GNRFT+TLRGV+ADS++ IK S
Sbjct: 276  TVFKQQASKLAALNKRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKS 335

Query: 938  ADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTRE 1117
            A+SLG +GFINYFGLQRFGSGSVPT+ +GA LL+GEW+ A              V   RE
Sbjct: 336  AESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAEC------SNAWHVVNDARE 389

Query: 1118 YYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLW 1297
            YYKET DI+GTLRQLPRYLVAERAIL  LKKCPG+YLQALK IPRTLRMMYVHSYQSYLW
Sbjct: 390  YYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLW 449

Query: 1298 NHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIA 1477
            N+AASLRV KYG  Q V+GDLV  K ++  ++   + SE  ++S  +A DCD +D+  + 
Sbjct: 450  NNAASLRVTKYGTSQVVLGDLVSTKVDAEKRMVDSLTSE-HNESSEEALDCDQVDDTAVV 508

Query: 1478 DLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLT 1657
            DLP E+S+LVK VS EDL  G Y  SD++LPLPGSR IYP NDIAE+YH+LAKKDGISLT
Sbjct: 509  DLPAERSDLVKVVSIEDLEAGTYLTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLT 568

Query: 1658 ESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKSKPVREGN 1837
            ES+H VKEFSIT+MTG +RRVFQKP+DFEWELLTYTD N PLAETDLD +   KPV +  
Sbjct: 569  ESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITVYKPVDKVG 628

Query: 1838 EDENISLIPLEKT----ESLEINGKHNNGT---ECDRELKQAQESQLALKLAFTLPSSCY 1996
              E I   PL+      ES E N K    +   E D     ++++Q+ALK+A TLPSSCY
Sbjct: 629  SAEEIEDEPLKSDTNPHESCETNLKDQTDSKEDEKDTRNPDSEQTQMALKMALTLPSSCY 688

Query: 1997 ATMAIRELLKTSTSVAFHKTLN 2062
            ATMAIRELLKTSTSVA+HKTLN
Sbjct: 689  ATMAIRELLKTSTSVAYHKTLN 710


>ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Capsella rubella]
            gi|482568803|gb|EOA32992.1| hypothetical protein
            CARUB_v10016322mg [Capsella rubella]
          Length = 704

 Score =  879 bits (2272), Expect = 0.0
 Identities = 450/676 (66%), Positives = 530/676 (78%), Gaps = 4/676 (0%)
 Frame = +2

Query: 47   MKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTSLDAPPE--IAEE 220
            MK +DE+DVGI C+IS+LPGFRGILKQRY+DFIVNEVD  GNVVHLTSLD PPE  + EE
Sbjct: 39   MKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDINGNVVHLTSLDLPPEMDVKEE 98

Query: 221  KETEIYDQSKDSCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXXXXXXXXXXXDKL 400
             +T+  D    + YTS IESF+S+    DAE L+  I+Q++SG +D           DK 
Sbjct: 99   DKTKSSDNVPQN-YTSAIESFKSISNATDAERLETLINQVTSGTDDEISPVVLDPSSDKS 157

Query: 401  HRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSKKRKDRGDKPFDS 580
             RTA+HNF KE FKFLVTDT+DGPD+ SKCIRVR+NSG HN R   SKKRK+RGDKPFDS
Sbjct: 158  KRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDS 217

Query: 581  RGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGTKDKRSVSTQRVT 760
            RGSE+WPEHVGKFLRFHLYKENK+TQEAL LIGKMLG+QP+SFGF+GTKDKRSVSTQ VT
Sbjct: 218  RGSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQCVT 277

Query: 761  VFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGVIADSKDIIKASA 940
            VFKQ A +LA+LN+RL GIKVGDFCHVKEGL LGQL+GNRFT+TLRGV+ADS++ IK SA
Sbjct: 278  VFKQQASKLAALNKRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSA 337

Query: 941  DSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPREGERDTVRKTREY 1120
            +SLG +GFINYFGLQRFGSGSVPT+ +GA LL+GEW+ A       R      V   REY
Sbjct: 338  ESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDA------ERINAWHVVNDAREY 391

Query: 1121 YKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRMMYVHSYQSYLWN 1300
            YKET DI+GTLRQLPRYLVAERAIL  LKKCPG+YLQALK IPRTLRMMYVHSYQSYLWN
Sbjct: 392  YKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWN 451

Query: 1301 HAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAYDCDHLDEIPIAD 1480
            +AASLRV+KYG  Q V+GDLV  K ++  K+     SE  +++  DA DCD +D+  I D
Sbjct: 452  NAASLRVKKYGTSQVVLGDLVSTKIDATKKMAD--TSEHKENN-EDALDCDQVDDTAIVD 508

Query: 1481 LPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYHNLAKKDGISLTE 1660
            LP E+S+LVK VS EDL  G Y+ SD++LPLPGSR IYP NDIAE+YH+LAKKDGISLT+
Sbjct: 509  LPAERSDLVKVVSVEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTD 568

Query: 1661 SVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDTVGKS-KPVREGN 1837
            S+H VKEFSIT+MTG +RRVFQKP+DFEWELLTYTD N PLAETDLD +  +   V    
Sbjct: 569  SIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITMTVDKVGSAE 628

Query: 1838 EDENISLIPLEKTESLEINGK-HNNGTECDRELKQAQESQLALKLAFTLPSSCYATMAIR 2014
            E E+ S+ P+      ++N +      E D     ++++Q+ALK+A TLPSSCYATMAIR
Sbjct: 629  EVEDESMNPISNPPETDLNDQTERKDDEKDTGNPNSEQTQMALKMALTLPSSCYATMAIR 688

Query: 2015 ELLKTSTSVAFHKTLN 2062
            ELLKTSTSVA+HKTLN
Sbjct: 689  ELLKTSTSVAYHKTLN 704


>ref|XP_006408145.1| hypothetical protein EUTSA_v10022286mg, partial [Eutrema salsugineum]
            gi|557109291|gb|ESQ49598.1| hypothetical protein
            EUTSA_v10022286mg, partial [Eutrema salsugineum]
          Length = 692

 Score =  874 bits (2259), Expect = 0.0
 Identities = 449/683 (65%), Positives = 533/683 (78%), Gaps = 9/683 (1%)
 Frame = +2

Query: 17   TTRYSEAPP--AMKALDESDVGILCYISKLPGFRGILKQRYSDFIVNEVDSEGNVVHLTS 190
            TT  + A P  + K +DESDVGI C+IS+LPGFRGILKQRY+DFIVNEVD +GNVVHLTS
Sbjct: 27   TTMATTANPLESKKTVDESDVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTS 86

Query: 191  LDAPPEIAEEKETEIYDQSKD--SCYTSEIESFRSLVGDIDAECLKAFIDQISSGVEDXX 364
            LD  PE+ +EKE E    S D    Y S IESFRS+    DAE L+  I+Q++S  +D  
Sbjct: 87   LDVSPEM-DEKEEEKTKSSDDVPQSYASAIESFRSISSVTDAERLETLINQVTSVTDDEI 145

Query: 365  XXXXXXXXXDKLHRTAVHNFFKEKFKFLVTDTIDGPDALSKCIRVRLNSGGHNKRAKNSK 544
                     DK  RTA+HNF KE FKFLVTDT+DGPD  SKCIRVR+NS  HN R K SK
Sbjct: 146  SPVVFDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPDPTSKCIRVRVNSADHNSRGKRSK 205

Query: 545  KRKDRGDKPFDSRGSENWPEHVGKFLRFHLYKENKETQEALSLIGKMLGLQPRSFGFAGT 724
            KRK+RGDKPFDSRGSE+WPEH+GKF++FHLYKENK+TQEAL LIGKMLG+QP+SFGF+GT
Sbjct: 206  KRKERGDKPFDSRGSEHWPEHLGKFVKFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGT 265

Query: 725  KDKRSVSTQRVTVFKQHAQRLASLNRRLIGIKVGDFCHVKEGLFLGQLLGNRFTVTLRGV 904
            KDKRSVS+QRVTVFKQ A +LA+LN+RL GIKVGDFCHVKEGL LGQL+GNRFT+TLRGV
Sbjct: 266  KDKRSVSSQRVTVFKQQASKLAALNKRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGV 325

Query: 905  IADSKDIIKASADSLGSNGFINYFGLQRFGSGSVPTYLIGATLLRGEWRAAVSMILDPRE 1084
            +ADS++ IK SA+SLG +GFINYFGLQRFGSGSVPT+ +GA +L+GEW+ AV MILDPRE
Sbjct: 326  VADSEETIKKSAESLGKDGFINYFGLQRFGSGSVPTHHVGAAVLKGEWKEAVDMILDPRE 385

Query: 1085 GERDTVRKTREYYKETDDIEGTLRQLPRYLVAERAILLSLKKCPGDYLQALKAIPRTLRM 1264
                 + + REYYKET DI+GTLRQLPRYLVAERAIL  LKKCPG+YLQALK IPRTLRM
Sbjct: 386  -----INEAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRM 440

Query: 1265 MYVHSYQSYLWNHAASLRVQKYGFDQAVIGDLVYCKEESIGKVTGLVASECVDDSLNDAY 1444
            MYVHSYQSYLWN+AASLRVQKYG +Q V+GDLV  K +   ++ G + SE  +++  +A 
Sbjct: 441  MYVHSYQSYLWNNAASLRVQKYGTNQVVLGDLVSTKVDDAKRIVGSLTSEHKENN-EEAL 499

Query: 1445 DCDHLDEIPIADLPEEKSNLVKAVSAEDLLTGNYTVSDVILPLPGSRAIYPMNDIAEVYH 1624
            DCD LD+  + DL  E+S+LVK V  ED+  G Y+ SD++LPLPGSR IYP NDIAE+YH
Sbjct: 500  DCDQLDDTAVVDLSGERSDLVKVVDIEDMEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYH 559

Query: 1625 NLAKKDGISLTESVHNVKEFSITNMTGAFRRVFQKPMDFEWELLTYTDGNIPLAETDLDT 1804
            NLAKKDGISLTES+H VKEFSIT+MTG +RRVFQKP+DFEWELLTYTD N PLAETDLD 
Sbjct: 560  NLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDR 619

Query: 1805 VGKSKPVREGNEDENISLIPLEKTESLEINGKHNNGTECDRELKQ-----AQESQLALKL 1969
            +   K   +    E I        ES++ + +      C+ +LK      ++++QLALK+
Sbjct: 620  ITLEKTRDKVGSAEEI--------ESMKSDSRPPE--SCESDLKDTGNPVSEQTQLALKM 669

Query: 1970 AFTLPSSCYATMAIRELLKTSTS 2038
            A TLPSSCYATMAIRELLKTSTS
Sbjct: 670  ALTLPSSCYATMAIRELLKTSTS 692