BLASTX nr result

ID: Paeonia24_contig00006222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00006222
         (1526 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containi...   209   3e-51
ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containi...   204   9e-50
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   203   2e-49
ref|XP_007048252.1| Pentatricopeptide repeat-containing protein,...   194   1e-46
ref|XP_007048251.1| Pentatricopeptide repeat-containing protein,...   194   1e-46
ref|XP_007048250.1| Pentatricopeptide repeat-containing protein,...   194   1e-46
ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containi...   191   7e-46
emb|CBI34116.3| unnamed protein product [Vitis vinifera]              190   1e-45
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...   186   3e-44
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-42
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-42
ref|XP_002305039.1| pentatricopeptide repeat-containing family p...   176   3e-41
ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citr...   175   4e-41
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   175   4e-41
ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containi...   174   9e-41
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ...   173   2e-40
ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containi...   172   4e-40
ref|XP_002880834.1| pentatricopeptide repeat-containing protein ...   166   3e-38
ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [A...   165   4e-38
ref|XP_006293706.1| hypothetical protein CARUB_v10022664mg [Caps...   164   1e-37

>ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 829

 Score =  209 bits (532), Expect = 3e-51
 Identities = 146/425 (34%), Positives = 223/425 (52%), Gaps = 2/425 (0%)
 Frame = -3

Query: 1440 MMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEE 1264
            M+N LR++P +A+S F Q+K+  F+HDI TY  +I   C   +D  +L+S  + ++   +
Sbjct: 70   MLNSLREEPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDM-KLDSLFLEVINLGK 128

Query: 1263 EGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWV 1084
             G    F + DL + +   L+     E P+ +L RA++ L KAY SL +F++    L   
Sbjct: 129  RGLG--FEVSDLFEELVEGLNA----EGPN-SLVRALDGLVKAYASLRMFDEAIDVLFQT 181

Query: 1083 KLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGK 904
            K      L + S ++L+ RL+E GK D  V+ Y+ LK  S++PN  TY IV +     G 
Sbjct: 182  KRCGFG-LSVLSCNYLMNRLVECGKVDMAVAVYKQLKRISVSPNVYTYGIVIKALCRKGN 240

Query: 903  FDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL 724
            F++   +F+EM     G   N  T  TYIE LCL G  +LGY +  R     +   DV+ 
Sbjct: 241  FEEAVGVFEEMEKA--GETPNEFTYSTYIEGLCLYGRSDLGYDVL-RAWKGVNLPLDVYA 297

Query: 723  LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
                 Y  +I+G     K  +A  VL D              D   Y AV+  +C TGNI
Sbjct: 298  -----YTAVIRGFVNEKKLQEAEMVLLDMEEQ------GMVPDAVSYGAVINGYCTTGNI 346

Query: 543  EEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDG 367
             +A+  +D + +RG  +N  IV LI Q +   G+  DA   +  + K        + +D 
Sbjct: 347  SKALAFHDKMETRGIKSNCVIVSLILQCLCKNGKARDAVDQFSSFKKKG------IFLDE 400

Query: 366  DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
              YN V+++LC++G+ EEA +LL+EMK K + PD+ HY+ L+ GYC    I  A+ +F+E
Sbjct: 401  VAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMGLFDE 460

Query: 186  MKEKG 172
            MKEKG
Sbjct: 461  MKEKG 465



 Score = 82.8 bits (203), Expect = 4e-13
 Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 10/292 (3%)
 Frame = -3

Query: 1017 HGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNT 838
            +GKE  +  ++  L++KS    AE YA +   + E+G      +LF  +    +G     
Sbjct: 520  YGKEAEI--FFNSLENKS----AENYAAMVNGYCELGNTKDAFELFVRLSK--QGVLIKR 571

Query: 837  DTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDA 658
             + L  +  LCL+GE+    KL+  +L   D    +   K      LI  LC+AG    A
Sbjct: 572  KSRLKLLSSLCLEGEYGKALKLFEIVLSLGDGICKIMCSK------LIASLCSAGDMKRA 625

Query: 657  SDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVG 478
              V  +    + + G+    D   Y  +L  +C    ++EA+ L+DD+  RG +   I  
Sbjct: 626  RWVFDN----LVWRGLT--PDVVIYTMMLNGYCRVNRLQEAIYLFDDMKKRGISPDVITY 679

Query: 477  LIFQAMFSKG----------EFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQV 328
             +     SK             +D  R     +  S+     +  D   Y ++++S C+ 
Sbjct: 680  TVMLDGHSKNLKRDRLSSDTSRNDRVRRDTGSVFWSEMNGMELTADVICYTVLIDSHCKS 739

Query: 327  GQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
              +++A  L  EM  + L PD   Y+AL+ GYC+  ++  A  +  +M  KG
Sbjct: 740  DNIDDAIHLFTEMIDRGLEPDSVTYTALICGYCKQGHVEMAKELVNDMWRKG 791



 Score = 79.0 bits (193), Expect = 5e-12
 Identities = 74/342 (21%), Positives = 138/342 (40%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1158 AVNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYEL 979
            A N +  A   LG F + +  L  +K   +   DI  Y+ L+     HG+    +  ++ 
Sbjct: 402  AYNGVIDALCKLGRFEEAEKLLDEMKDKRMTP-DIVHYTTLINGYCLHGQILDAMGLFDE 460

Query: 978  LKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQ 799
            +K K + P+  TY ++A   S  G   +   L D M                        
Sbjct: 461  MKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHM------------------------ 496

Query: 798  GEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSY 619
                 G KL    +                + V+I+GLC  G   +A    +        
Sbjct: 497  ----KGQKLMPTTVT---------------HNVIIEGLCIGGYGKEAEIFFNSLE----- 532

Query: 618  YGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGL-IFQAMFSKGEF 442
                 +   + Y A++  +C  GN ++A EL+  +  +G        L +  ++  +GE+
Sbjct: 533  -----NKSAENYAAMVNGYCELGNTKDAFELFVRLSKQGVLIKRKSRLKLLSSLCLEGEY 587

Query: 441  DDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
              A + +E  +   D       I     + ++ SLC  G ++ A  + + +  + L PDV
Sbjct: 588  GKALKLFEIVLSLGDG------ICKIMCSKLIASLCSAGDMKRARWVFDNLVWRGLTPDV 641

Query: 261  RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
              Y+ +L GYCR+N +  A+ +F++MK++G S     +T+++
Sbjct: 642  VIYTMMLNGYCRVNRLQEAIYLFDDMKKRGISPDVITYTVML 683



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 63/297 (21%), Positives = 122/297 (41%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD+ +Y+ +++  +   K          ++ + + P+A +Y  V   +   G   +    
Sbjct: 293  LDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGYCTTGNISKALAF 352

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
             D+M +   G  +N       ++ LC  G+       +S       K   +FL +  Y  
Sbjct: 353  HDKMET--RGIKSNCVIVSLILQCLCKNGKARDAVDQFSSF-----KKKGIFLDEVAYNG 405

Query: 702  VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
            V I  LC  G+F++A  +L +              D   Y  ++  +C  G I +A+ L+
Sbjct: 406  V-IDALCKLGRFEEAEKLLDEMK------DKRMTPDIVHYTTLINGYCLHGQILDAMGLF 458

Query: 522  DDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVME 343
            D++  +G     I   +    FS+      A     ++KG      +V      +N+++E
Sbjct: 459  DEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHMKGQKLMPTTVT-----HNVIIE 513

Query: 342  SLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
             LC  G  +EA    N ++ K       +Y+A++ GYC + N   A  +F  + ++G
Sbjct: 514  GLCIGGYGKEAEIFFNSLENK----SAENYAAMVNGYCELGNTKDAFELFVRLSKQG 566



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 75/351 (21%), Positives = 147/351 (41%), Gaps = 21/351 (5%)
 Frame = -3

Query: 1068 NVLDISSY--SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
            N ++++SY  + +L  L E  + +  +S++  LK      + +TY  + R     G   +
Sbjct: 58   NTVEVNSYWVTEMLNSLRE--EPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDMK 115

Query: 894  VNKLFDEMFSVFEGA--WTNTDTCLTYIEELCLQGEFELGYKLYSRI-----LIECDKDF 736
            ++ LF E+ ++ +    +  +D     +E L  +G   L   L   +     L   D+  
Sbjct: 116  LDSLFLEVINLGKRGLGFEVSDLFEELVEGLNAEGPNSLVRALDGLVKAYASLRMFDEAI 175

Query: 735  DV-FLLKRKYYKV-------LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYY 580
            DV F  KR  + +       L+  L   GK D A  V            ++   +   Y 
Sbjct: 176  DVLFQTKRCGFGLSVLSCNYLMNRLVECGKVDMAVAVYKQLKR------ISVSPNVYTYG 229

Query: 579  AVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
             V++  C  GN EEAV +++++   G   +          F+   + +    Y +   G 
Sbjct: 230  IVIKALCRKGNFEEAVGVFEEMEKAGETPNE---------FTYSTYIEGLCLYGRSDLGY 280

Query: 399  DP----KFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGY 232
            D     K  ++ +D   Y  V+       +++EA  +L +M+ + + PD   Y A++ GY
Sbjct: 281  DVLRAWKGVNLPLDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGY 340

Query: 231  CRINNIPAALSIFEEMKEKGFSACQT*FTLLIFRLSFPSRVLESTNCFKGF 79
            C   NI  AL+  ++M+ +G  +     +L++  L    +  ++ + F  F
Sbjct: 341  CTTGNISKALAFHDKMETRGIKSNCVIVSLILQCLCKNGKARDAVDQFSSF 391


>ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Solanum lycopersicum]
          Length = 644

 Score =  204 bits (519), Expect = 9e-50
 Identities = 142/425 (33%), Positives = 222/425 (52%), Gaps = 2/425 (0%)
 Frame = -3

Query: 1440 MMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEE 1264
            M+N LR++P +A+S F Q+K+  F+HDI TY  +I   C   +D  +L+S  + ++   +
Sbjct: 70   MLNSLREEPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDM-KLDSLFLEVINLGK 128

Query: 1263 EGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWV 1084
            +G    F + DL + +   L+     E P+ +L RA++ L KAY SL +F++    L   
Sbjct: 129  KGLG--FEVSDLFEELVEGLNA----EGPN-SLVRALDGLVKAYASLRMFDEAIDVLFQT 181

Query: 1083 KLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGK 904
            K      L + S ++L+ RL+E+GK D  V+ Y+ LK  S++PN  TY IV +     G 
Sbjct: 182  KRCGFG-LSVLSCNYLMNRLVEYGKVDMAVAVYKQLKRISVSPNVYTYGIVIKALCRKGN 240

Query: 903  FDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL 724
            F++   +F+EM     G   N  T  TYIE LC  G  +LGY +  R     +   DV+ 
Sbjct: 241  FEEAVGVFEEMEKA--GETPNEFTYSTYIEGLCSYGRSDLGYDVL-RAWKGVNLPLDVYA 297

Query: 723  LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
                 Y  +I+G     K  +A  VL D              D   Y AV+  +C  GNI
Sbjct: 298  -----YTAVIRGFVNEKKLQEAEMVLLDMEEQ------GMVPDAVSYGAVINGYCTAGNI 346

Query: 543  EEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDG 367
             +A+  +D + +RG  +N  I  LI Q +   G+  DA   +  + K        + +D 
Sbjct: 347  SKALAFHDKMETRGIRSNCVIFSLILQCLCKNGKACDAVEQFSSFKKKG------IFLDE 400

Query: 366  DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
              YN V+++LC++G+ EEA +LL+EMK K + PD+ HY+ L+ GYC    I  A+ +F+E
Sbjct: 401  VAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMGLFDE 460

Query: 186  MKEKG 172
            MK+KG
Sbjct: 461  MKQKG 465



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 63/297 (21%), Positives = 123/297 (41%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD+ +Y+ +++  +   K          ++ + + P+A +Y  V   +   G   +    
Sbjct: 293  LDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGYCTAGNISKALAF 352

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
             D+M +   G  +N       ++ LC  G+     + +S       K   +FL +  Y  
Sbjct: 353  HDKMET--RGIRSNCVIFSLILQCLCKNGKACDAVEQFSSF-----KKKGIFLDEVAYNG 405

Query: 702  VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
            V I  LC  G+F++A  +L +              D   Y  ++  +C  G I +A+ L+
Sbjct: 406  V-IDALCKLGRFEEAEKLLDEMK------DKRMTPDIVHYTTLINGYCLHGQILDAMGLF 458

Query: 522  DDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVME 343
            D++  +G     I   +    FS+      A     ++KG      +V      +N+++E
Sbjct: 459  DEMKQKGLKPDIITYNVLAGGFSRNGLVKEALHLLDHMKGQGLMPTTVT-----HNVIIE 513

Query: 342  SLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
             LC  G  EEA    + ++ K       +Y+A++ GYC + N   A  +F  + ++G
Sbjct: 514  GLCIGGYGEEAELFFDSLENK----SAENYAAMVNGYCELGNTKDAFELFVRLSKQG 566



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 21/351 (5%)
 Frame = -3

Query: 1068 NVLDISSY--SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
            N ++++SY  + +L  L E  + +  +S++  LK      + +TY  + R     G   +
Sbjct: 58   NTIEVNSYWVTEMLNSLRE--EPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDMK 115

Query: 894  VNKLFDEMFSVFEGA--WTNTDTCLTYIEELCLQGEFELGYKLYSRI-----LIECDKDF 736
            ++ LF E+ ++ +    +  +D     +E L  +G   L   L   +     L   D+  
Sbjct: 116  LDSLFLEVINLGKKGLGFEVSDLFEELVEGLNAEGPNSLVRALDGLVKAYASLRMFDEAI 175

Query: 735  DV-FLLKRKYYKV-------LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYY 580
            DV F  KR  + +       L+  L   GK D A  V            ++   +   Y 
Sbjct: 176  DVLFQTKRCGFGLSVLSCNYLMNRLVEYGKVDMAVAVYKQLKR------ISVSPNVYTYG 229

Query: 579  AVLRKFCNTGNIEEAVELYDDIHSRGSA-NSAIVGLIFQAMFSKGEFD---DAARFYEKY 412
             V++  C  GN EEAV +++++   G   N        + + S G  D   D  R +   
Sbjct: 230  IVIKALCRKGNFEEAVGVFEEMEKAGETPNEFTYSTYIEGLCSYGRSDLGYDVLRAW--- 286

Query: 411  IKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGY 232
                  K  ++ +D   Y  V+       +++EA  +L +M+ + + PD   Y A++ GY
Sbjct: 287  ------KGVNLPLDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGY 340

Query: 231  CRINNIPAALSIFEEMKEKGFSACQT*FTLLIFRLSFPSRVLESTNCFKGF 79
            C   NI  AL+  ++M+ +G  +    F+L++  L    +  ++   F  F
Sbjct: 341  CTAGNISKALAFHDKMETRGIRSNCVIFSLILQCLCKNGKACDAVEQFSSF 391


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial [Vitis vinifera]
          Length = 817

 Score =  203 bits (516), Expect = 2e-49
 Identities = 149/453 (32%), Positives = 230/453 (50%), Gaps = 7/453 (1%)
 Frame = -3

Query: 1428 LRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGSP 1252
            L+ +P  A S F+Q+K+  F+H++ TYA +I +LC   + E +L S L  ++ S+E    
Sbjct: 73   LKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRL-ERKLQSLLSEIVGSKESVLG 131

Query: 1251 -PVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
              + +L D+++    E++G       S  L   ++ L KAYV +G+F++   AL   K  
Sbjct: 132  FDITALFDVLREGGGEVEGEH-----SSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRR 186

Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
               V  I S +FL+ RLIEHGK D  V+ Y  LK   + PN  TY I  +     G F++
Sbjct: 187  GF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 894  VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
               +F EM     G   N  TC TYIE LC     +LGY+   R L   +   D F    
Sbjct: 246  AVDVFREMEEA--GVNPNAVTCSTYIEGLCSHKRSDLGYEAL-RALRAANWPIDTFA--- 299

Query: 714  KYYKVLIKGLCAAGKFDDASDVLHDY-NLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
              Y  +I+G C+  K  +A DV  D  N  ++  G         Y A++  +C  GN+ +
Sbjct: 300  --YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGY-------IYGALIHAYCKAGNLLQ 350

Query: 537  AVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDF 361
            AV L++D+ S G   N  IV  I Q +   G   +    ++++      +   + +D   
Sbjct: 351  AVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEF------RDSGIFLDEVL 404

Query: 360  YNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMK 181
            YNIV+++LC++G+VEEA ELLNEMK + ++ DV HY+ L+ GYC    +  A ++FEEMK
Sbjct: 405  YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 464

Query: 180  EKGFSACQT*FTLLI---FRLSFPSRVLESTNC 91
            E+G       + +L+    R       LE  +C
Sbjct: 465  ERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 497



 Score = 72.0 bits (175), Expect = 7e-10
 Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 32/335 (9%)
 Frame = -3

Query: 1044 SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFS 865
            S +L+ L E G    VV  ++  +   I  +   Y IV     ++GK ++  +L +EM  
Sbjct: 371  SSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM-- 428

Query: 864  VFEGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRIL---IECD-KDFDVFL------- 724
              +G   + D     T I   CLQG+      ++  +    IE D   +++ +       
Sbjct: 429  --KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNG 486

Query: 723  LKRKYYKVL------------------IKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN 598
            LK++  ++L                  I+GLC AGK  +A   L+             D 
Sbjct: 487  LKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE----------DK 536

Query: 597  DTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGS-ANSAIVGLIFQAMFSKGEFDDAARFY 421
              + Y A++  +C      +A EL+  +  +G          +  ++  +GE+D A    
Sbjct: 537  CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILL 596

Query: 420  EKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALL 241
            E+ +   D +   ++     Y  ++ + C+ G ++ A  + + +  + + PDV  Y+ ++
Sbjct: 597  ERML-ALDVEPNQIM-----YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 650

Query: 240  KGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
             GYCR+N +  A  IF +MKE+G       +T+++
Sbjct: 651  NGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 79/367 (21%), Positives = 144/367 (39%), Gaps = 70/367 (19%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD+  Y+ L+      GK     + +E +K + I P+  TY I+    S  G   +  +L
Sbjct: 435  LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 494

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIEC--------------- 748
             D + +  +G   N+ T    IE LC+ G+ +      + +  +C               
Sbjct: 495  LDCIGT--QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKAN 552

Query: 747  --DKDFDVF--------LLKRKYYKVLIKGLCAAGKFDDASDVLHD------------YN 634
               K +++F        L+K+K    L+  LC  G++D A  +L              Y 
Sbjct: 553  FTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYG 612

Query: 633  LAVSYYGVNWDN-----------------DTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
              +  +  + D                  D   Y  ++  +C    + EA ++++D+  R
Sbjct: 613  KLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKER 672

Query: 504  GSANSAIVGLIF-------------QAMFSKGEFD---DAARFYEKYIKGSDPKFGSVLI 373
            G     I   +                 FSKG  +   DA+ F+      S+ K   +  
Sbjct: 673  GIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFW------SEMKEMGIKP 726

Query: 372  DGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIF 193
            D   Y ++++S C+   +++A  L +EM  + L PD+  Y+ALL   C   ++  A+++ 
Sbjct: 727  DVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLV 786

Query: 192  EEMKEKG 172
             EM  KG
Sbjct: 787  NEMSFKG 793


>ref|XP_007048252.1| Pentatricopeptide repeat-containing protein, putative isoform 3
            [Theobroma cacao] gi|508700513|gb|EOX92409.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 3 [Theobroma cacao]
          Length = 784

 Score =  194 bits (492), Expect = 1e-46
 Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 3/433 (0%)
 Frame = -3

Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
            D+V+++  +N L K P +A+S F+Q+ +D F HD+ TY  ++ +LC    D  +L+S L+
Sbjct: 35   DRVEVVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDR-KLDSVLL 93

Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
             ++  E+      F ++DL + +   L+G       S  L R  N+L KAYVS+ +F+++
Sbjct: 94   EIIRKEKRLG---FEIMDLCEALEEGLEGE-----DSYLLVRLSNALVKAYVSVEMFDEV 145

Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
               L   +     V  I S +FL+ RLI  GK D  V+ Y+ LK   + PN  TY+I+ +
Sbjct: 146  INILFQTRRCGF-VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIK 204

Query: 924  VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
               + G  ++   +F EM         N     TYIE LC+ G  ELGY++  ++  +  
Sbjct: 205  ALCKKGSLEEAFNVFREMEEA--EVRPNAFAYTTYIEGLCMHGRTELGYEVL-KVCRKAK 261

Query: 744  KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
               D F      Y V+I+G     K   A DVL D        GV    D   Y A++R 
Sbjct: 262  VPLDPFA-----YSVVIRGFSKEMKLKVAEDVLFD----AENNGVV--PDVTSYGALIRG 310

Query: 564  FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKG-EFDDAARFYEKYIKGSDPK 391
            +C  GNI +A++++ ++ S+G   N  I+  I Q++   G +F    +F E    G    
Sbjct: 311  YCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIG---- 366

Query: 390  FGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIP 211
               + +D   +N++ ++LC+ GQVEEA +LL+EMK K ++PDV +Y+ L+ GYCR   + 
Sbjct: 367  ---IFLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVE 423

Query: 210  AALSIFEEMKEKG 172
             A ++F+EMK  G
Sbjct: 424  DAWNLFKEMKNNG 436



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 28/329 (8%)
 Frame = -3

Query: 1038 LLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVF 859
            +L+ L + G +   V+ ++  +   I  +   + ++A    + G+ ++  KL DEM    
Sbjct: 342  ILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALCKGGQVEEAKKLLDEM---- 397

Query: 858  EGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
            +G   + D     T I   C QG+ E  + L+  +     K   VF      Y VL  GL
Sbjct: 398  KGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVF------YSVLAGGL 451

Query: 684  CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
               G    A D+L+      S        DT  +  +++  C    ++EA    D +  +
Sbjct: 452  ARNGHAQKAVDLLN------SMEAQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGK 505

Query: 504  GSAN-SAIVGLIFQAMFSKGEFDDAARFYEK---YIKGSDPKF-GSVLIDGD-------- 364
               N +A+V    +A  +K  F    +  E+     K S  K   S+ + GD        
Sbjct: 506  CLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLL 565

Query: 363  -------------FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
                          Y  ++ + CQ G +  A  L N M  K L PD+  Y+ ++ GYC++
Sbjct: 566  KIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKV 625

Query: 222  NNIPAALSIFEEMKEKGFSACQT*FTLLI 136
              +  AL +F  MKE+G       +T+L+
Sbjct: 626  KLLQKALDLFNNMKERGIKPDVITYTVLL 654


>ref|XP_007048251.1| Pentatricopeptide repeat-containing protein, putative isoform 2
            [Theobroma cacao] gi|508700512|gb|EOX92408.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 2 [Theobroma cacao]
          Length = 818

 Score =  194 bits (492), Expect = 1e-46
 Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 3/433 (0%)
 Frame = -3

Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
            D+V+++  +N L K P +A+S F+Q+ +D F HD+ TY  ++ +LC    D  +L+S L+
Sbjct: 61   DRVEVVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDR-KLDSVLL 119

Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
             ++  E+      F ++DL + +   L+G       S  L R  N+L KAYVS+ +F+++
Sbjct: 120  EIIRKEKRLG---FEIMDLCEALEEGLEGE-----DSYLLVRLSNALVKAYVSVEMFDEV 171

Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
               L   +     V  I S +FL+ RLI  GK D  V+ Y+ LK   + PN  TY+I+ +
Sbjct: 172  INILFQTRRCGF-VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIK 230

Query: 924  VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
               + G  ++   +F EM         N     TYIE LC+ G  ELGY++  ++  +  
Sbjct: 231  ALCKKGSLEEAFNVFREMEEA--EVRPNAFAYTTYIEGLCMHGRTELGYEVL-KVCRKAK 287

Query: 744  KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
               D F      Y V+I+G     K   A DVL D        GV    D   Y A++R 
Sbjct: 288  VPLDPFA-----YSVVIRGFSKEMKLKVAEDVLFD----AENNGVV--PDVTSYGALIRG 336

Query: 564  FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKG-EFDDAARFYEKYIKGSDPK 391
            +C  GNI +A++++ ++ S+G   N  I+  I Q++   G +F    +F E    G    
Sbjct: 337  YCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIG---- 392

Query: 390  FGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIP 211
               + +D   +N++ ++LC+ GQVEEA +LL+EMK K ++PDV +Y+ L+ GYCR   + 
Sbjct: 393  ---IFLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVE 449

Query: 210  AALSIFEEMKEKG 172
             A ++F+EMK  G
Sbjct: 450  DAWNLFKEMKNNG 462



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 28/329 (8%)
 Frame = -3

Query: 1038 LLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVF 859
            +L+ L + G +   V+ ++  +   I  +   + ++A    + G+ ++  KL DEM    
Sbjct: 368  ILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALCKGGQVEEAKKLLDEM---- 423

Query: 858  EGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
            +G   + D     T I   C QG+ E  + L+  +     K   VF      Y VL  GL
Sbjct: 424  KGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVF------YSVLAGGL 477

Query: 684  CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
               G    A D+L+      S        DT  +  +++  C    ++EA    D +  +
Sbjct: 478  ARNGHAQKAVDLLN------SMEAQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGK 531

Query: 504  GSAN-SAIVGLIFQAMFSKGEFDDAARFYEK---YIKGSDPKF-GSVLIDGD-------- 364
               N +A+V    +A  +K  F    +  E+     K S  K   S+ + GD        
Sbjct: 532  CLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLL 591

Query: 363  -------------FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
                          Y  ++ + CQ G +  A  L N M  K L PD+  Y+ ++ GYC++
Sbjct: 592  KIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKV 651

Query: 222  NNIPAALSIFEEMKEKGFSACQT*FTLLI 136
              +  AL +F  MKE+G       +T+L+
Sbjct: 652  KLLQKALDLFNNMKERGIKPDVITYTVLL 680


>ref|XP_007048250.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508700511|gb|EOX92407.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 792

 Score =  194 bits (492), Expect = 1e-46
 Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 3/433 (0%)
 Frame = -3

Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
            D+V+++  +N L K P +A+S F+Q+ +D F HD+ TY  ++ +LC    D  +L+S L+
Sbjct: 35   DRVEVVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDR-KLDSVLL 93

Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
             ++  E+      F ++DL + +   L+G       S  L R  N+L KAYVS+ +F+++
Sbjct: 94   EIIRKEKRLG---FEIMDLCEALEEGLEGE-----DSYLLVRLSNALVKAYVSVEMFDEV 145

Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
               L   +     V  I S +FL+ RLI  GK D  V+ Y+ LK   + PN  TY+I+ +
Sbjct: 146  INILFQTRRCGF-VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIK 204

Query: 924  VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
               + G  ++   +F EM         N     TYIE LC+ G  ELGY++  ++  +  
Sbjct: 205  ALCKKGSLEEAFNVFREMEEA--EVRPNAFAYTTYIEGLCMHGRTELGYEVL-KVCRKAK 261

Query: 744  KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
               D F      Y V+I+G     K   A DVL D        GV    D   Y A++R 
Sbjct: 262  VPLDPFA-----YSVVIRGFSKEMKLKVAEDVLFD----AENNGVV--PDVTSYGALIRG 310

Query: 564  FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKG-EFDDAARFYEKYIKGSDPK 391
            +C  GNI +A++++ ++ S+G   N  I+  I Q++   G +F    +F E    G    
Sbjct: 311  YCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIG---- 366

Query: 390  FGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIP 211
               + +D   +N++ ++LC+ GQVEEA +LL+EMK K ++PDV +Y+ L+ GYCR   + 
Sbjct: 367  ---IFLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVE 423

Query: 210  AALSIFEEMKEKG 172
             A ++F+EMK  G
Sbjct: 424  DAWNLFKEMKNNG 436



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 28/329 (8%)
 Frame = -3

Query: 1038 LLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVF 859
            +L+ L + G +   V+ ++  +   I  +   + ++A    + G+ ++  KL DEM    
Sbjct: 342  ILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALCKGGQVEEAKKLLDEM---- 397

Query: 858  EGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
            +G   + D     T I   C QG+ E  + L+  +     K   VF      Y VL  GL
Sbjct: 398  KGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVF------YSVLAGGL 451

Query: 684  CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
               G    A D+L+      S        DT  +  +++  C    ++EA    D +  +
Sbjct: 452  ARNGHAQKAVDLLN------SMEAQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGK 505

Query: 504  GSAN-SAIVGLIFQAMFSKGEFDDAARFYEK---YIKGSDPKF-GSVLIDGD-------- 364
               N +A+V    +A  +K  F    +  E+     K S  K   S+ + GD        
Sbjct: 506  CLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLL 565

Query: 363  -------------FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
                          Y  ++ + CQ G +  A  L N M  K L PD+  Y+ ++ GYC++
Sbjct: 566  KIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKV 625

Query: 222  NNIPAALSIFEEMKEKGFSACQT*FTLLI 136
              +  AL +F  MKE+G       +T+L+
Sbjct: 626  KLLQKALDLFNNMKERGIKPDVITYTVLL 654


>ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score =  191 bits (485), Expect = 7e-46
 Identities = 134/436 (30%), Positives = 231/436 (52%), Gaps = 3/436 (0%)
 Frame = -3

Query: 1470 AAPDKVQLIGMMNCLRKDPKEAISLFSQVK-DYFRHDILTYAKVIGMLCDSSIDEDRLNS 1294
            A  + ++++  +N  +  P  A  LF ++K D FRH++LTY  ++ +LC   +D  +L+S
Sbjct: 89   ADSETLEVVNKLNSCKTKPNSAFLLFCKLKEDGFRHNVLTYCALVRILCYWRLDR-KLDS 147

Query: 1293 ALVRLLASEEEGSPPV-FSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGL 1117
              + L+    +GS  V F L DL++ +  E++        SP++ R  ++L K+ V+L +
Sbjct: 148  LFLELI----KGSGDVGFGLKDLLEAMEEEVE-------VSPSIVRGFDALVKSLVNLNM 196

Query: 1116 FNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYA 937
            F+     L   +     V  I + ++L+ RLIE G+  + +S Y+ LK   + PN  TYA
Sbjct: 197  FDDAIDVLFHTRRRGF-VQHIFTINYLMNRLIECGELGAALSIYKQLKGIGLVPNDYTYA 255

Query: 936  IVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
            IV +     G+ ++  ++F+EM     G   +      YIE LC +G  ++G     ++L
Sbjct: 256  IVIKGFCMEGRLEEAGEVFEEM--ELAGVAPSVFAYTAYIEGLCNKGRSDVG----CQVL 309

Query: 756  IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYA 577
              C ++    LL    YK +I+G C   KFD+A  +  D              D+  Y A
Sbjct: 310  QYCKREN--ILLDAYAYKAVIRGFCDEMKFDEAESLFLDMEKQ------GMVPDSCIYSA 361

Query: 576  VLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
            ++  +C   N+ +A+ L++D+ S+G   N  IVG I Q +   G   +A   + ++    
Sbjct: 362  MIGGYCKNYNLLKALALHNDMVSKGIKTNCVIVGFILQCLCKIGMATEAVDQFLEF---- 417

Query: 399  DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRIN 220
              K   + +D   YNI +++LC++ +VEEA+ELL EMK+K+++ D+ HY+ L+KGYC + 
Sbjct: 418  --KSMGIYLDEVTYNIAVDALCRLSRVEEASELLEEMKLKNMSLDIMHYTTLIKGYCLLG 475

Query: 219  NIPAALSIFEEMKEKG 172
             +  A +I EEM EKG
Sbjct: 476  KVVDASNILEEMHEKG 491


>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  190 bits (483), Expect = 1e-45
 Identities = 145/452 (32%), Positives = 222/452 (49%), Gaps = 6/452 (1%)
 Frame = -3

Query: 1428 LRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGSP 1252
            L+ +P  A S F+Q+K+  F+H++ TYA +I +LC   + E +L S L  ++ S+E    
Sbjct: 73   LKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRL-ERKLQSLLSEIVGSKESVLG 131

Query: 1251 -PVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
              + +L D+++    E++G       S  L   ++ L KAYV +G+F++   AL   K  
Sbjct: 132  FDITALFDVLREGGGEVEGEH-----SSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRR 186

Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
               V  I S +FL+ RLIEHGK D  V+ Y  LK   + PN  TY I  +     G F++
Sbjct: 187  GF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 894  VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
               +F EM     G   N  TC TYIE LC     +LGY+   R L   +   D F    
Sbjct: 246  AVDVFREMEEA--GVNPNAVTCSTYIEGLCSHKRSDLGYEAL-RALRAANWPIDTFA--- 299

Query: 714  KYYKVLIKGLCAAGKFDDASDVLHD-YNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
              Y  +I+G C+  K  +A DV  D  N  ++        D   Y A++  +C  GN+ +
Sbjct: 300  --YTAVIRGFCSEMKLKEAEDVFIDMVNEGIA-------PDGYIYGALIHAYCKAGNLLQ 350

Query: 537  AVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFY 358
            AV L++D+ S G   + +              D    F +            + +D   Y
Sbjct: 351  AVALHNDMVSNGIKTNLV--------------DQFKEFRD----------SGIFLDEVLY 386

Query: 357  NIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKE 178
            NIV+++LC++G+VEEA ELLNEMK + ++ DV HY+ L+ GYC    +  A ++FEEMKE
Sbjct: 387  NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 446

Query: 177  KGFSACQT*FTLLI---FRLSFPSRVLESTNC 91
            +G       + +L+    R       LE  +C
Sbjct: 447  RGIEPDIVTYNILVGGFSRNGLKKEALELLDC 478



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 10/319 (3%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD   Y+ ++  L + GK +  V     +K + ++ +   Y  +   +   GK      +
Sbjct: 381  LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNM 440

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
            F+EM    +      D  +TY   + + G    G K  +  L++C     +      + +
Sbjct: 441  FEEM----KERGIEPDI-VTY--NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNR 493

Query: 702  VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
            + I+GLC AGK  +A   L+             D   + Y A++  +C      +A EL+
Sbjct: 494  I-IEGLCMAGKVKEAEAFLNTLE----------DKCLENYSAMVDGYCKANFTRKAYELF 542

Query: 522  DDIHSRG---------SANSAIVGLIFQAMFSKGEFDDAARFYEKYI-KGSDPKFGSVLI 373
              +  +G           N  + G +  A    G+   A   ++  + +G  P       
Sbjct: 543  SRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP------- 595

Query: 372  DGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIF 193
            D   Y +++   C+V  + EA ++ N+MK + + PDV  Y+ +L G+ + NN+  A++++
Sbjct: 596  DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLY 655

Query: 192  EEMKEKGFSACQT*FTLLI 136
            +EM  +G       +T L+
Sbjct: 656  DEMIARGLQPDIVTYTALL 674



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 65/319 (20%), Positives = 145/319 (45%), Gaps = 6/319 (1%)
 Frame = -3

Query: 1026 LIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAW 847
            ++ +G + ++V  ++  +   I  +   Y IV     ++GK ++  +L +EM    +G  
Sbjct: 358  MVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM----KGRR 413

Query: 846  TNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAG 673
             + D     T I   CLQG+      ++  +  E   + D+       Y +L+ G    G
Sbjct: 414  MSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK-ERGIEPDIVT-----YNILVGGFSRNG 467

Query: 672  KFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSAN 493
               +A ++L      +   G+  ++ T  +  ++   C  G ++EA    + +  +   N
Sbjct: 468  LKKEALELLD----CIGTQGLKPNSAT--HNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN 521

Query: 492  -SAIVGLIFQAMFSKGEFDDAARFYEKYIK---GSDPKFGSVLIDGDFYNIVMESLCQVG 325
             SA+V    +A F++  ++  +R  ++ I      D +   ++     Y  ++ + C+ G
Sbjct: 522  YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIM-----YGKLIGAFCRDG 576

Query: 324  QVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FT 145
             ++ A  + + +  + + PDV  Y+ ++ GYCR+N +  A  IF +MKE+G       +T
Sbjct: 577  DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 636

Query: 144  LLIFRLSFPSRVLESTNCF 88
            +++   S  + + ++ N +
Sbjct: 637  VVLDGHSKTNNLQDAINLY 655



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 4/286 (1%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD+  Y+ L+      GK     + +E +K + I P+  TY I+    S  G   +  +L
Sbjct: 416  LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 475

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
             D + +  +G   N+ T    IE LC+ G+ +      + +  +C ++          Y 
Sbjct: 476  LDCIGT--QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----------YS 523

Query: 702  VLIKGLCAAGKFDDASDVLHDYNLA--VSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVE 529
             ++ G C A     A ++    +    +    ++ + +   Y  ++  FC  G+++ A  
Sbjct: 524  AMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 583

Query: 528  LYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAAR--FYEKYIKGSDPKFGSVLIDGDFYN 355
            ++D +  RG     I   +    + +      AR  F +   +G  P       D   Y 
Sbjct: 584  VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP-------DVITYT 636

Query: 354  IVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINN 217
            +V++   +   +++A  L +EM  + L PD+  Y+ALL G C   +
Sbjct: 637  VVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGS 682


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score =  186 bits (471), Expect = 3e-44
 Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 8/438 (1%)
 Frame = -3

Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
            D  +++ ++  L+  P  A+S F+Q+KD  F+HDI TYA +I +LC   + +   +  L 
Sbjct: 65   DSFKVVDILYNLKNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLD 124

Query: 1284 RLLASEEEGSPP--VFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFN 1111
             +  S  +   P  +   LD +    +++D  +     S  +++  ++L KAYVS+G+F+
Sbjct: 125  IIYVSCNDNDTPFEISHFLDTLSDGFVDVDSKK----QSLFMSKVYDALVKAYVSVGMFD 180

Query: 1110 Q---IKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETY 940
                + F +   + VP     I   +FL+  LI++ K D  ++ Y+ LK   ++PN  TY
Sbjct: 181  DAIDVLFQMGRRRFVP----HIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTY 236

Query: 939  AIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLT-YIEELCLQGEFELGYKLYSR 763
            AIV +     G  ++   +  EM    E   T T    T YIE LC+    +LGY++   
Sbjct: 237  AIVIKALCINGSLEEAMYVIKEME---ESGITPTGFAYTAYIEGLCVNEMSDLGYQV--- 290

Query: 762  ILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCY 583
              ++  K  ++  L    Y V ++G C   KFD A  VL D              D  CY
Sbjct: 291  --LQAWKGANI-PLDMYAYTVAVRGFCNELKFDKAESVLRDMEKE------GMVPDMHCY 341

Query: 582  YAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK 406
             A++ +FC  GN+ +A    +++ S+G   N  IVG I   +   G   +    + ++  
Sbjct: 342  TALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQF-- 399

Query: 405  GSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCR 226
                K   + +DG  YN V+++LC++G++EEA  LL+EMK+K +  DV HY+ L+ GYC 
Sbjct: 400  ----KSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCC 455

Query: 225  INNIPAALSIFEEMKEKG 172
              N+  A  +FEEM+E G
Sbjct: 456  QGNVVDAFKVFEEMRENG 473



 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 35/363 (9%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            +D+ +Y  L+     +G     ++  + ++++ + PN+ TY +V       GK  +   +
Sbjct: 476  IDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAV 535

Query: 882  F--------DEMFSVFEGAW--TNTDTCLTYIEELCLQGEFELG--YKLYSRILIECDKD 739
            F        D  F++  G     +T         L ++G  +    Y L   +  E D D
Sbjct: 536  FNSIEDKSLDNYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDND 595

Query: 738  FDVFLLK----------RKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTD 589
              + LL+          +  Y  L   LC AG           +++ +      W  D  
Sbjct: 596  GILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKR---GWTPDLI 652

Query: 588  CYYAVLRKFCNTGNIEEAVELYDDIHSRG-------------SANSAIVGLIFQAMFSKG 448
             Y  ++  +C    ++EAV+L+ D+  RG               + A +  ++ A  +KG
Sbjct: 653  AYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKG 712

Query: 447  EFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAP 268
              +D    ++     ++ K   +  D  FY ++++  C+V  + +A  + +EM  + L P
Sbjct: 713  GNED---IFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEP 769

Query: 267  DVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLIFRLSFPSRVLESTNCF 88
            D+  Y+ALL G C+  ++  A+++ ++M  KG S      + L+  +   +R   +  C 
Sbjct: 770  DIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGI-LKTRQCSAPQCL 828

Query: 87   KGF 79
            K F
Sbjct: 829  KYF 831


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Cucumis sativus]
          Length = 795

 Score =  179 bits (455), Expect = 2e-42
 Identities = 139/436 (31%), Positives = 218/436 (50%), Gaps = 5/436 (1%)
 Frame = -3

Query: 1464 PDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSAL 1288
            P KV  + ++  LR++PK A S F ++++  F+H+I TYA +I +LC   +   +L +  
Sbjct: 59   PSKV--VQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGR-KLETLF 115

Query: 1287 VRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQ 1108
            + L+ S++      F +LDLI+++     G  V  S      R  ++L KAYVS+ LF+ 
Sbjct: 116  LNLIGSKKVE----FDVLDLIESLN---QGCVVDAS----FIRVYDALIKAYVSVNLFDS 164

Query: 1107 IK---FALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYA 937
            +    F L     VP     I + ++LL RLIEHGK +  +  YE LK     PN  TYA
Sbjct: 165  VVDLLFRLGRKGFVP----HIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYA 220

Query: 936  IVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
             V +   ++GK ++   +F+EM     G   N   C  YIE LC       GY+L     
Sbjct: 221  TVIKGLCKIGKMEKAIDIFEEMSGY--GMVPNAFACAAYIEALCTHDCSTSGYQLLQAWR 278

Query: 756  IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYA 577
             E      +F +    Y V+I+G C   K D+A  V  D    +  YGV  D  T  Y  
Sbjct: 279  AE------LFPIDTYAYTVVIRGFCDEMKIDEAESVFLD----MENYGVVPDAQT--YGV 326

Query: 576  VLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
            ++  +C   N+++A+ L+  + S+G  +N  IV  I Q       + +    + K  +G 
Sbjct: 327  LINGYCKKLNLQKALSLHSLMLSKGIKSNCVIVSFILQCFLRMQMYSEVVNQF-KVFQGK 385

Query: 399  DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRIN 220
                  V +D   YNIV+ +LC++G++EEA ELL EM  + +  DV HY+ ++KG     
Sbjct: 386  -----GVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMIKGLFAQG 440

Query: 219  NIPAALSIFEEMKEKG 172
             I  A+ +FE +K+ G
Sbjct: 441  KIHEAMMMFENLKKNG 456



 Score = 85.1 bits (209), Expect = 8e-14
 Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 33/342 (9%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            +D+  Y+ ++K L   GK    +  +E LK   + P++ TY+++A   S  G   +V  L
Sbjct: 424  MDVMHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDL 483

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL------- 724
             D M     G   +       IE LC+ G+ +   ++++ + ++   ++   +       
Sbjct: 484  LDYMEE--HGLRKDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVDNYAAMINGYCAAS 541

Query: 723  ------------------LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN 598
                              ++R     L+  LC       A +V+    +      +N + 
Sbjct: 542  DTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMKQLPV------MNVEA 595

Query: 597  DTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKG--EFDDAARF 424
                Y  V+   C   N++ A  L+D +   G     I  LI   M   G  + +     
Sbjct: 596  KEIVYNKVIASLCRVKNMKMAQCLFDCLVRAG----LIPDLITYTMMINGYCKINYLREA 651

Query: 423  YEKYI----KGSDPKFG--SVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
            YE       +G +P     +VL+DG F   + +  C   ++   + + NEMK   + PDV
Sbjct: 652  YELLCDMRNRGREPDIFVYTVLLDGGFKTSLQK--CSSVEIALTSSIFNEMKDMKITPDV 709

Query: 261  RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
             +Y+ L+ GYC++NN+  A  +FEEM ++G  A    +T L+
Sbjct: 710  VYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTALL 751



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 70/321 (21%), Positives = 140/321 (43%), Gaps = 9/321 (2%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            +D  +Y+ +++   +  K D   S +  +++  + P+A+TY ++   + +     +   L
Sbjct: 284  IDTYAYTVVIRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSL 343

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVF-----LLK 718
               M S  +G  +N           C+   F L   L  ++  E    F VF      L 
Sbjct: 344  HSLMLS--KGIKSN-----------CVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLD 390

Query: 717  RKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
               Y +++  LC  GK ++A ++L +              D   Y  +++     G I E
Sbjct: 391  NVVYNIVVHALCELGKLEEAIELLEEMTSR------QIQMDVMHYTTMIKGLFAQGKIHE 444

Query: 537  AVELYDDIHSRGSANSAIVGLIFQAMFSKG----EFDDAARFYEKYIKGSDPKFGSVLID 370
            A+ +++++   G    +I   +  A FS+     +  D   + E++    DPK   ++I 
Sbjct: 445  AMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKDPKMPDLII- 503

Query: 369  GDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFE 190
                    E+LC  G+V+EA E+ N ++VK     V +Y+A++ GYC  ++  +A  +F 
Sbjct: 504  --------ENLCIGGKVKEATEIFNSLEVK----TVDNYAAMINGYCAASDTKSAYKLFV 551

Query: 189  EMKEKGFSACQT*FTLLIFRL 127
             + ++G    ++    L+ RL
Sbjct: 552  NLSKEGIFIRRSSLVRLVSRL 572


>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Cucumis sativus]
          Length = 920

 Score =  179 bits (455), Expect = 2e-42
 Identities = 139/436 (31%), Positives = 218/436 (50%), Gaps = 5/436 (1%)
 Frame = -3

Query: 1464 PDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSAL 1288
            P KV  + ++  LR++PK A S F ++++  F+H+I TYA +I +LC   +   +L +  
Sbjct: 59   PSKV--VQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGR-KLETLF 115

Query: 1287 VRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQ 1108
            + L+ S++      F +LDLI+++     G  V  S      R  ++L KAYVS+ LF+ 
Sbjct: 116  LNLIGSKKVE----FDVLDLIESLN---QGCVVDAS----FIRVYDALIKAYVSVNLFDS 164

Query: 1107 IK---FALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYA 937
            +    F L     VP     I + ++LL RLIEHGK +  +  YE LK     PN  TYA
Sbjct: 165  VVDLLFRLGRKGFVP----HIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYA 220

Query: 936  IVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
             V +   ++GK ++   +F+EM     G   N   C  YIE LC       GY+L     
Sbjct: 221  TVIKGLCKIGKMEKAIDIFEEMSGY--GMVPNAFACAAYIEALCTHDCSTSGYQLLQAWR 278

Query: 756  IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYA 577
             E      +F +    Y V+I+G C   K D+A  V  D    +  YGV  D  T  Y  
Sbjct: 279  AE------LFPIDTYAYTVVIRGFCDEMKIDEAESVFLD----MENYGVVPDAQT--YGV 326

Query: 576  VLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
            ++  +C   N+++A+ L+  + S+G  +N  IV  I Q       + +    + K  +G 
Sbjct: 327  LINGYCKKLNLQKALSLHSLMLSKGIKSNCVIVSFILQCFLRMQMYSEVVNQF-KVFQGK 385

Query: 399  DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRIN 220
                  V +D   YNIV+ +LC++G++EEA ELL EM  + +  DV HY+ ++KG     
Sbjct: 386  -----GVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMIKGLFAQG 440

Query: 219  NIPAALSIFEEMKEKG 172
             I  A+ +FE +K+ G
Sbjct: 441  KIHEAMMMFENLKKNG 456



 Score = 85.1 bits (209), Expect = 8e-14
 Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 33/342 (9%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            +D+  Y+ ++K L   GK    +  +E LK   + P++ TY+++A   S  G   +V  L
Sbjct: 424  MDVMHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDL 483

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL------- 724
             D M     G   +       IE LC+ G+ +   ++++ + ++   ++   +       
Sbjct: 484  LDYMEE--HGLRKDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVDNYAAMINGYCAAS 541

Query: 723  ------------------LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN 598
                              ++R     L+  LC       A +V+    +      +N + 
Sbjct: 542  DTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMKQLPV------MNVEA 595

Query: 597  DTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKG--EFDDAARF 424
                Y  V+   C   N++ A  L+D +   G     I  LI   M   G  + +     
Sbjct: 596  KEIVYNKVIASLCRVKNMKMAQCLFDCLVRAG----LIPDLITYTMMINGYCKINYLREA 651

Query: 423  YEKYI----KGSDPKFG--SVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
            YE       +G +P     +VL+DG F   + +  C   ++   + + NEMK   + PDV
Sbjct: 652  YELLCDMRNRGREPDIFVYTVLLDGGFKTSLQK--CSSVEIALTSSIFNEMKDMKITPDV 709

Query: 261  RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
             +Y+ L+ GYC++NN+  A  +FEEM ++G  A    +T L+
Sbjct: 710  VYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTALL 751



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 70/321 (21%), Positives = 140/321 (43%), Gaps = 9/321 (2%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            +D  +Y+ +++   +  K D   S +  +++  + P+A+TY ++   + +     +   L
Sbjct: 284  IDTYAYTVVIRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSL 343

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVF-----LLK 718
               M S  +G  +N           C+   F L   L  ++  E    F VF      L 
Sbjct: 344  HSLMLS--KGIKSN-----------CVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLD 390

Query: 717  RKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
               Y +++  LC  GK ++A ++L +              D   Y  +++     G I E
Sbjct: 391  NVVYNIVVHALCELGKLEEAIELLEEMTSR------QIQMDVMHYTTMIKGLFAQGKIHE 444

Query: 537  AVELYDDIHSRGSANSAIVGLIFQAMFSKG----EFDDAARFYEKYIKGSDPKFGSVLID 370
            A+ +++++   G    +I   +  A FS+     +  D   + E++    DPK   ++I 
Sbjct: 445  AMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKDPKMPDLII- 503

Query: 369  GDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFE 190
                    E+LC  G+V+EA E+ N ++VK     V +Y+A++ GYC  ++  +A  +F 
Sbjct: 504  --------ENLCIGGKVKEATEIFNSLEVK----TVDNYAAMINGYCAASDTKSAYKLFV 551

Query: 189  EMKEKGFSACQT*FTLLIFRL 127
             + ++G    ++    L+ RL
Sbjct: 552  NLSKEGIFIRRSSLVRLVSRL 572


>ref|XP_002305039.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222848003|gb|EEE85550.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 800

 Score =  176 bits (445), Expect = 3e-41
 Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 5/448 (1%)
 Frame = -3

Query: 1452 QLIGMMNCLRKDPKEAISLFSQVKDYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLA 1273
            +++  +  L+  P  A S+FS +K+    DI  YA +I +LC   + +  L+S  + L  
Sbjct: 68   KIVDTLYNLKNQPHLAFSIFSHLKN---PDIPAYAAIIRILCHWGLHK-MLHSIFLHLHQ 123

Query: 1272 SEEE-GSPPVFSLLDLIQT---VAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
            +  +  S  +  LLD +     + I+L+     +  S  L +  ++L K+YV+ G+ ++ 
Sbjct: 124  NNNDFTSFDISHLLDTLSLPHHIDIDLEKEDTVKHRSSFLIQVYDALVKSYVTAGMLDEA 183

Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
              AL  +K     +  I ++++L+ +LI +GK D+ ++ Y+ LKS  + PN  TY+I+ +
Sbjct: 184  INALFQIKRRGF-LPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIK 242

Query: 924  VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
                 G   + + +F EM     G   N     TYIE LC     + GY++  +   E +
Sbjct: 243  AFCRKGSLVEASNVFQEMELC--GVIPNAYAYTTYIEGLCANQRSDFGYQVL-QAWKEGN 299

Query: 744  KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
               DV+      Y  +I+G C   K D A  VL D             +D  CY  ++R 
Sbjct: 300  IPIDVYA-----YVAVIRGFCNEMKMDRAEVVLGDMEKQELI------SDARCYSELIRG 348

Query: 564  FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKF 388
            +C  G++ +A+ L++D+ S+G   N  IV  I Q    KG        ++++      K 
Sbjct: 349  YCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRF------KD 402

Query: 387  GSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPA 208
              + +D   YNIV+++LC++ +V++A  LL+EMK K +  D+ HY+ L+ GYC +  +  
Sbjct: 403  LRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVD 462

Query: 207  ALSIFEEMKEKGFSACQT*FTLLIFRLS 124
            A  +FEEM+ KG       F +L+   S
Sbjct: 463  AFRVFEEMEGKGLEPDVVTFNILLAAFS 490



 Score = 75.5 bits (184), Expect = 6e-11
 Identities = 71/342 (20%), Positives = 147/342 (42%), Gaps = 2/342 (0%)
 Frame = -3

Query: 1155 VNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELL 976
            V+++ + +   G+ +Q+       K + +  LD  SY+ ++  L +  K D  V+  + +
Sbjct: 377  VSTILQYFCEKGMHSQVVEEFKRFKDLRI-FLDEVSYNIVVDALCKLEKVDQAVALLDEM 435

Query: 975  KSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQG 796
            K K +  +   Y  +   +  +GK     ++F+EM    +G   +  T    +     +G
Sbjct: 436  KGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEG--KGLEPDVVTFNILLAAFSRRG 493

Query: 795  EFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYY 616
                  KLY  +  +  K   +       + V+I+GLC  GK  +A           +++
Sbjct: 494  LANEALKLYEYMKSQDLKPNAIT------HNVMIEGLCIGGKVTEAE----------AFF 537

Query: 615  GVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSA-NSAIVGLIFQAMFSKGEFD 439
                D   D Y A++  +C   + E+A EL+ ++  RG   +   +  + + +  +GE D
Sbjct: 538  CNMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKD 597

Query: 438  DAARFYEKYIK-GSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
             A    +  +    +P         D Y  V+ +  + G +  A  + + ++   L PD+
Sbjct: 598  RALWLLKTMLDLNMEPS-------KDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDI 650

Query: 261  RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
              Y+ ++   CR N +  A ++F++MK +G       FT+L+
Sbjct: 651  FTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLL 692



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 7/303 (2%)
 Frame = -3

Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
            D+ +++ LL      G  +  +  YE +KS+ + PNA T+ ++       GK  +    F
Sbjct: 478  DVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFF 537

Query: 879  DEMFSVFEGAWTNTDTCLT-YIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
              M    + +  N    +T Y E    +   EL ++L  R L          L+ R Y  
Sbjct: 538  CNME---DKSIDNYGAMITGYCEAKHTEKASELFFELSERGL----------LMDRGYIY 584

Query: 702  VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
             L++ LC  G+ D A  +L       +   +N +   D Y  V+      G++  A  ++
Sbjct: 585  KLLEKLCEEGEKDRALWLLK------TMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVF 638

Query: 522  DDIHSRGSANSAIVGLIFQAMFSKGEFDDAAR--FYEKYIKGSDPKFGS--VLIDGDFYN 355
            D +   G             +  +      AR  F +   +G  P   +  VL+DG    
Sbjct: 639  DILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKR 698

Query: 354  IVMESLCQVGQVEE--AAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMK 181
            +  E+  +  +     A+ +  EM+   + PDV  Y+AL+ G+C+++ +  A+ +++EM 
Sbjct: 699  VHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMM 758

Query: 180  EKG 172
             +G
Sbjct: 759  YRG 761


>ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citrus clementina]
            gi|557531495|gb|ESR42678.1| hypothetical protein
            CICLE_v10011094mg [Citrus clementina]
          Length = 810

 Score =  175 bits (444), Expect = 4e-41
 Identities = 129/429 (30%), Positives = 221/429 (51%), Gaps = 2/429 (0%)
 Frame = -3

Query: 1452 QLIGMMNCLRKDPKEAISLFSQVK-DYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLL 1276
            +++  +  LRK+PK A+S F Q+K   F H++ TYA ++ +LC     + +L S L+ L+
Sbjct: 65   EVVEKLYSLRKEPKIALSFFEQLKRSGFSHNLCTYAAIVRILCCCGWQK-KLESMLLELV 123

Query: 1275 ASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFA 1096
              + + +   F   DLI+ +  E          S  LTR  +++ KAYVS+G+F+++   
Sbjct: 124  RKKTDAN---FEATDLIEALCGE---------GSTLLTRLSDAMIKAYVSVGMFDEVIDI 171

Query: 1095 LSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHS 916
            L  +      V  I S ++ + +L+E GK D  ++ Y+ LK   ++ N  TY IV +   
Sbjct: 172  LFQINRRGF-VWSICSCNYFMNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIKALC 230

Query: 915  EMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDF 736
            + G   +  ++F EM     G   N     T IE LC+ G  +LGY+L  +   E D   
Sbjct: 231  KKGSMQEAVEVFLEMEKA--GVTPNAFAYSTCIEGLCMNGMLDLGYELLLK-WEEADIPL 287

Query: 735  DVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCN 556
              F      Y V+I+G C   K + A  VL    L +   GV    D   Y A++  +C 
Sbjct: 288  SAFA-----YTVVIRGFCDQNKLEKAECVL----LHMEKQGVV--PDVYAYSALISGYCK 336

Query: 555  TGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSV 379
             G I +A+ L+ ++ S+G   N  ++ +I + +   G    A+   +++++  D  F   
Sbjct: 337  FGKINKALPLHHEMTSKGIKTNCGVLSVILKGLCRNGM---ASAAIKQFLEFKDMGF--- 390

Query: 378  LIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALS 199
             +D   Y+++++SLC++G+VE+A  L  EMK + + PDV +Y+ ++ GYC    +  AL 
Sbjct: 391  FLDKVCYDVIVDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD 450

Query: 198  IFEEMKEKG 172
            +F+EMKE G
Sbjct: 451  LFKEMKEMG 459



 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 15/323 (4%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD   Y  ++  L + G+ +  +  +E +K + I P+   Y  +   +   GK      L
Sbjct: 392  LDKVCYDVIVDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDL 451

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKY-- 709
            F EM  +      +    +TY     L G F      Y  +     K FD+    +++  
Sbjct: 452  FKEMKEM-----GHKPDIITYN---ILAGAFAQ----YGAV----QKAFDLLNYMKRHGL 495

Query: 708  ------YKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGN 547
                  + ++I+GLC  G+ ++A   L          G   +N    Y A++  +C TG+
Sbjct: 496  EPNFVTHNMIIEGLCMGGRVEEAEAFLDGLK------GKCLEN----YSAMINGYCKTGH 545

Query: 546  IEEAVELYDDIHSRG------SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK-GSDPKF 388
             +EA +L+  + ++G      S N  +  L+        + ++A + ++  I   ++P  
Sbjct: 546  TKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILR-----DNNNALKLFKTMITLNAEPS- 599

Query: 387  GSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPA 208
                     Y+ ++ +LCQ  ++E+A  + + +  K L P +  Y+ ++ GYC+IN +  
Sbjct: 600  ------KSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLRE 653

Query: 207  ALSIFEEMKEKGFSACQT*FTLL 139
            A  +F +MK++G +     +T+L
Sbjct: 654  ARDVFNDMKQRGITPDVVTYTVL 676



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 87/434 (20%), Positives = 168/434 (38%), Gaps = 14/434 (3%)
 Frame = -3

Query: 1431 CLRKDPKEAISLFSQVKD-YFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGS 1255
            C   + ++A+ LF ++KD     D++ Y  +I   C     + +L  AL      +E G 
Sbjct: 405  CKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCF----QGKLGDALDLFKEMKEMGH 460

Query: 1254 PPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
             P     D+I                        N L  A+   G   +    L+++K  
Sbjct: 461  KP-----DII----------------------TYNILAGAFAQYGAVQKAFDLLNYMKRH 493

Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
             L   +  +++ +++ L   G+ +   ++ + LK K +    E Y+ +   + + G   +
Sbjct: 494  GLEP-NFVTHNMIIEGLCMGGRVEEAEAFLDGLKGKCL----ENYSAMINGYCKTGHTKE 548

Query: 894  VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
              +LF  + +  +G      +C   +  L +  +     KL+  ++    +        +
Sbjct: 549  AFQLFMRLSN--QGVLVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNAEP------SK 600

Query: 714  KYYKVLIKGLCAAGKFDDAS---DVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
              Y  LI  LC A + + A    DVL D  L               Y  ++  +C    +
Sbjct: 601  SMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLI---------TYTMMIHGYCKINCL 651

Query: 543  EEAVELYDDIHSRGSANSAIVGLIFQAMFSK------GEFDDAARFYEKYIKGS----DP 394
             EA ++++D+  RG     +   +     SK          DA +  E  +  S    + 
Sbjct: 652  REARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASVFWNEM 711

Query: 393  KFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNI 214
            K   +  D   Y +++  LC    +E+   + NE+  + L PD   Y+ALL GY    ++
Sbjct: 712  KEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTALLCGYLAKGDL 771

Query: 213  PAALSIFEEMKEKG 172
              A+++ +EM  KG
Sbjct: 772  DRAIALVDEMSVKG 785


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  175 bits (444), Expect = 4e-41
 Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 2/424 (0%)
 Frame = -3

Query: 1437 MNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEE 1261
            +N LR +P  A S F+Q+K+  + HD  TYA ++ +LC       +L+S L+ ++  +++
Sbjct: 66   LNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSR-KLDSILMEII--KKD 122

Query: 1260 GSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVK 1081
            G+   F +++L + +     G  +       L +  ++L K  V+ G+F+Q    L   K
Sbjct: 123  GNLD-FGIVNLFEAL-----GDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTK 176

Query: 1080 LVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKF 901
                    I S +FL+ RL+E  K D  ++ Y  LK+  + PN  TY I  +     G  
Sbjct: 177  HCGF-APQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNL 235

Query: 900  DQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLL 721
             +   +F +M     G   N+ +  T+IE LCL G  +LG+K+   + I      DVF  
Sbjct: 236  AEAIDVFRDMEE--SGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV-INAKIPMDVFA- 291

Query: 720  KRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIE 541
                Y V+I+G C+  K  +A  +L +           +  D   Y A++  +C  GN+ 
Sbjct: 292  ----YTVVIRGFCSEMKLKEAESILREMEKQ------GFAPDVYVYCALISGYCMVGNLL 341

Query: 540  EAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGD 364
            +A+ L+D++ S+G   N  I+  I Q +   G   + A  ++++ K        +  D  
Sbjct: 342  KALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMG------IFFDEA 395

Query: 363  FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEM 184
             YN+VM++LC++G+VEEA ELL EMK K + PD+ +Y+ ++ GY     +  AL+I+ EM
Sbjct: 396  CYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREM 455

Query: 183  KEKG 172
            K+ G
Sbjct: 456  KDIG 459



 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 20/325 (6%)
 Frame = -3

Query: 993  SYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIE 814
            SY+  LK    + +  TYA + R+    G   +++ +  E+    +G   N D  +  + 
Sbjct: 78   SYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKK-DG---NLDFGIVNLF 133

Query: 813  ELCLQG----EFELGYKLYSRILIEC------DKDFDVFLLKRKYY---------KVLIK 691
            E    G     F +  ++   ++  C      D+ FDV LL+ K+            L+ 
Sbjct: 134  EALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDV-LLQTKHCGFAPQILSCNFLMN 192

Query: 690  GLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIH 511
             L  + K D A  +       +  +G+N ++ T  Y   ++ FC  GN+ EA++++ D+ 
Sbjct: 193  RLVESRKVDMAIAIYRQ----LKAFGLNPNDYT--YTIAIKGFCRKGNLAEAIDVFRDME 246

Query: 510  SRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLC 334
              G + NS       + +   G  D   +  +  I    P      +D   Y +V+   C
Sbjct: 247  ESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIP------MDVFAYTVVIRGFC 300

Query: 333  QVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT 154
               +++EA  +L EM+ +  APDV  Y AL+ GYC + N+  AL++ +EM  KG      
Sbjct: 301  SEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCV 360

Query: 153  *FTLLIFRLSFPSRVLESTNCFKGF 79
              + ++  LS      E  N FK F
Sbjct: 361  ILSSILQGLSQMGMASEVANQFKEF 385



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 33/329 (10%)
 Frame = -3

Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
            DI +Y+ L      +G     +S    ++++ + P+  T+ ++       GK D     F
Sbjct: 463  DIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFF 522

Query: 879  D-------EMFSVFEGAW---TNTDTCLTYIEELCLQGEF---ELGYKLYSRILIECDKD 739
            D       E +S     +    + +     +  L  QG        +KL   +  E D +
Sbjct: 523  DNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSE 582

Query: 738  FDVFLLKRKY----------YKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTD 589
              + LL+             Y  +I  L  AG+ + A  V   +N+ V         D  
Sbjct: 583  KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYV---FNMLVDR---GLAPDVI 636

Query: 588  CYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFD------DAAR 427
             Y  ++  +C    ++EA  +  D+ +RG     I   +     SK +        DA +
Sbjct: 637  TYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMK 696

Query: 426  FYEKYIKGS----DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVR 259
              E  +  S    + K   +  D   Y ++++  C+   +++A  L NEM  + LAPD  
Sbjct: 697  SKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTV 756

Query: 258  HYSALLKGYCRINNIPAALSIFEEMKEKG 172
             Y+ALL GYC + NI  A+ +F+EM  KG
Sbjct: 757  TYTALLSGYCNVGNIKKAVVLFDEMLNKG 785



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 88/434 (20%), Positives = 169/434 (38%), Gaps = 2/434 (0%)
 Frame = -3

Query: 1431 CLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGS 1255
            C     KEA S+  ++ K  F  D+  Y  +I   C        + + L  L   +E  S
Sbjct: 300  CSEMKLKEAESILREMEKQGFAPDVYVYCALISGYC-------MVGNLLKALALHDEMVS 352

Query: 1254 PPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
              V +   ++ ++   L            +   V + FK +  +G+F             
Sbjct: 353  KGVKTNCVILSSILQGLS--------QMGMASEVANQFKEFKKMGIF------------- 391

Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
                 D + Y+ ++  L + GK +  V     +K K + P+   Y  V   +   GK   
Sbjct: 392  ----FDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVD 447

Query: 894  VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
               ++ EM  +      +    +TY     L G F         + +    +        
Sbjct: 448  ALNIYREMKDI-----GHKPDIVTYN---VLAGGFSRNGLTQEALSLLNYMETQGVKPDT 499

Query: 714  KYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEA 535
              + ++I+GLC  GK DDA           +++    +   + Y A++  +C   ++ +A
Sbjct: 500  VTHNMIIEGLCIGGKVDDAQ----------AFFDNLEEKCLENYSAMVNGYCEANHVNKA 549

Query: 534  VELYDDIHSRGSA-NSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFY 358
              L   +  +G     A    +   + S+G+ + A    E  +  +       +I    Y
Sbjct: 550  FALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALN---INPTMI---MY 603

Query: 357  NIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKE 178
            + V+ +L Q G++E+A  + N +  + LAPDV  Y+ ++ GYCR+N +  A  +  +MK 
Sbjct: 604  SKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKN 663

Query: 177  KGFSACQT*FTLLI 136
            +G       +T+L+
Sbjct: 664  RGIEPDVITYTVLL 677


>ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like [Glycine max]
          Length = 801

 Score =  174 bits (441), Expect = 9e-41
 Identities = 131/440 (29%), Positives = 222/440 (50%), Gaps = 5/440 (1%)
 Frame = -3

Query: 1476 PTAAPDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRL 1300
            P ++     ++  ++ L  +P  A+S F+ ++   F H I TYA +I +L   ++   +L
Sbjct: 43   PPSSFSTFDVLQTLHHLHNNPSHALSFFTHLRHTGFSHTISTYAAIIKILSFWNLQR-QL 101

Query: 1299 NSALVRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLG 1120
            ++  + L+  +    P  F LL+L +T+  + + S      +  L RA N   K  VSL 
Sbjct: 102  DTLFLHLINRDHPPLP--FPLLNLFETLFQDFNTSH---KNNYFLLRAFNGFVKTCVSLN 156

Query: 1119 LFNQ-IKFALSWVK--LVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNA 949
            +F++ I F     +  ++P    D+ + +FL  RL+EHG+ D  ++ YE LK     PN 
Sbjct: 157  MFDKAIDFLFQTRRRGILP----DVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNC 212

Query: 948  ETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLY 769
             TYAIV +   + G   Q   +F+EM  V  G   ++     YIE LC     +LGY++ 
Sbjct: 213  YTYAIVIKALCKKGDLKQPLCVFEEMERV--GVIPHSYCFAAYIEGLCNNHRSDLGYEVL 270

Query: 768  SRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTD 589
                 + +   +V+      Y  +++G C   K D+A  V  D    +   GV    D  
Sbjct: 271  QAFR-KGNAPLEVYA-----YTAVVRGFCNEMKLDEAQGVFDD----MERQGVV--PDVY 318

Query: 588  CYYAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKY 412
             Y +++  +C + N+  A+ L+D++ SRG   N  +V  I   +   GE        +++
Sbjct: 319  VYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCL---GEMGMTLEVVDQF 375

Query: 411  IKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGY 232
                + K   + +DG  YNIV ++LC +G+VE+A E++ EMK K L  DV+HY+ L+ GY
Sbjct: 376  ---KELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGY 432

Query: 231  CRINNIPAALSIFEEMKEKG 172
            C   ++  A ++F+EMKEKG
Sbjct: 433  CLQGDLVTAFNMFKEMKEKG 452



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 73/342 (21%), Positives = 140/342 (40%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1158 AVNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYEL 979
            A N +F A   LG        +  +K   L  LD+  Y+ L+      G   +  + ++ 
Sbjct: 389  AYNIVFDALCMLGKVEDAVEMVEEMKSKRLG-LDVKHYTTLINGYCLQGDLVTAFNMFKE 447

Query: 978  LKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQ 799
            +K K + P+  TY ++A   S  G   +  KL D M S  +G   N+ T           
Sbjct: 448  MKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMES--QGMKPNSTT----------- 494

Query: 798  GEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSY 619
                                          +K++I+GLC+ GK  +A            Y
Sbjct: 495  ------------------------------HKMIIEGLCSGGKVLEAE----------VY 514

Query: 618  YGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGS-ANSAIVGLIFQAMFSKGEF 442
            +    D + + Y A++  +C T  ++++ E++  + ++G  A  A    +   +   G+ 
Sbjct: 515  FNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDI 574

Query: 441  DDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
            + A +  ++ +        +V      Y+ ++ +LCQ G ++ A  L +    +   PDV
Sbjct: 575  EKAVKLLDRML------LSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDV 628

Query: 261  RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
              Y+ ++  YCR+N +  A  +F++MK +G       FT+L+
Sbjct: 629  VTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLL 670



 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 69/337 (20%), Positives = 132/337 (39%), Gaps = 39/337 (11%)
 Frame = -3

Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
            DI +Y+ L   L  +G     V   + ++S+ + PN+ T+ ++       GK  +    F
Sbjct: 456  DIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYF 515

Query: 879  D-------EMFSVFEGAWTNTD----------------------TCLTYIEELCLQGEFE 787
            +       E++S     +  TD                      +C   + +LC+ G+ E
Sbjct: 516  NSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIE 575

Query: 786  LGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVN 607
               KL  R+L+      +V   K  Y K+L   LC AG   +A  +         +    
Sbjct: 576  KAVKLLDRMLLS-----NVEPSKIMYSKILA-ALCQAGDMKNARTLFD------VFVHRG 623

Query: 606  WDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIF----------QAMF 457
            +  D   Y  ++  +C    ++EA +L+ D+  RG     I   +           +   
Sbjct: 624  FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFS 683

Query: 456  SKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKH 277
            S G+    + +    ++  D +   +  D   Y ++M+   +    ++A  L ++M    
Sbjct: 684  SHGKRKTTSLYVSTILR--DMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESG 741

Query: 276  LAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFS 166
            L PD   Y+AL+ G C   ++  A+++  EM  KG +
Sbjct: 742  LEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMT 778


>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491298|gb|AES72501.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  173 bits (439), Expect = 2e-40
 Identities = 129/440 (29%), Positives = 223/440 (50%), Gaps = 8/440 (1%)
 Frame = -3

Query: 1464 PDKVQLIGMMNCLRKDPKEAISLFSQVKDY--FRHDILTYAKVIGMLCDSSIDEDRLNSA 1291
            P+  Q++  ++  R +P  A+S FS++K+   F H+I TY  +I +LC  +++  RL+S 
Sbjct: 61   PNTSQILQKLHLYRNNPSLALSHFSELKNQHGFSHNIQTYVAIIRILCYWNLNR-RLDSL 119

Query: 1290 LVRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFN 1111
               ++ S  + +P +F + DL + +   L+G  V +  +  L RA     KA V L +F+
Sbjct: 120  FRDIIISHSKQNP-LFEIHDLFEKL---LEGVNVKDK-NHYLLRAFVGFVKACVGLNMFD 174

Query: 1110 QIKFALSWVKLVPLNVL-DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAI 934
                 +   ++    +L +I + +FL+ RL++  + +     ++ +KS  + PN  TYAI
Sbjct: 175  DAIDFMFMFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAI 234

Query: 933  VAR-VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
            + + + ++ G   Q + +FDEM     G   N+     YIE LC   + +LGY L  R L
Sbjct: 235  IIKALGTKGGDLKQASGVFDEMKEA--GVTPNSYCYAAYIEGLCNNHQSDLGYDLL-RAL 291

Query: 756  IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN---DTDC 586
             E +   DV+      Y  +I+G C   K D A  V         +Y + W     D   
Sbjct: 292  RENNAPIDVYA-----YTAVIRGFCNEMKLDKAMQV---------FYDMEWQRLVPDCHV 337

Query: 585  YYAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYI 409
            Y +++  +C T ++ +A++LY+D+  +G   N  IV  I       GE       +++  
Sbjct: 338  YSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEV- 396

Query: 408  KGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYC 229
                 K   V +DG  YNIV +SL ++G+++E A +L ++K  H+  D++HY+  +KGYC
Sbjct: 397  -----KQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYC 451

Query: 228  RINNIPAALSIFEEMKEKGF 169
                   A  IF+EM+EKGF
Sbjct: 452  LQGKPDKAYIIFKEMEEKGF 471



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 3/306 (0%)
 Frame = -3

Query: 1044 SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFS 865
            S +L    E G++  VV  ++ +K   +  +   Y IV     ++GK D+V  + +++ S
Sbjct: 374  SCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKS 433

Query: 864  VFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
            +         T  T+I+  CLQG+ +  Y ++  +    +K F   ++    Y VL  GL
Sbjct: 434  MHIDFDIKHYT--TFIKGYCLQGKPDKAYIIFKEME---EKGFKPDVVA---YNVLAAGL 485

Query: 684  CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
            C      +A D+L+     +   GV  ++ T  +  ++  FC+ G IEEA   ++ +   
Sbjct: 486  CGNRHVSEAMDLLN----YMDSQGVKPNSTT--HKIIIEGFCSEGKIEEAEGYFNSMKDE 539

Query: 504  G-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVL--IDGDFYNIVMESLC 334
                 +A+V    +A   +  ++    F+E   +G   +  S L  +    Y+ V+  LC
Sbjct: 540  SVEIYTAMVSGYCEADLIEKSYE---LFHELSNRGDTAQESSCLKQLSKVLYSKVLAELC 596

Query: 333  QVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT 154
            Q G ++ A  L +    +   PDV  Y+ ++K YC +N +  A  +F++MK +G      
Sbjct: 597  QKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVI 656

Query: 153  *FTLLI 136
             +T+L+
Sbjct: 657  TYTVLL 662



 Score = 78.6 bits (192), Expect = 7e-12
 Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 11/309 (3%)
 Frame = -3

Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
            D+ +Y+ L   L  +      +     + S+ + PN+ T+ I+       GK ++    F
Sbjct: 474  DVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYF 533

Query: 879  DEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKV 700
            + M    E     T     Y E   ++  +EL ++L +R     +      L K  Y KV
Sbjct: 534  NSMKD--ESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKV 591

Query: 699  LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYD 520
            L + LC  G    A   L D+     + G  +  D   Y  +++ +C    ++EA +L+ 
Sbjct: 592  LAE-LCQKGNMQRARS-LFDF-----FLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQ 644

Query: 519  DIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDF------- 361
            D+ SRG     I   +     SK +      F  ++ KG D  +    I  D        
Sbjct: 645  DMKSRGIKPDVITYTVLLDGKSK-QARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSP 703

Query: 360  ----YNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIF 193
                Y ++++   +V   E+A  L NE+  + L PD   Y+AL  G     N   A++++
Sbjct: 704  DVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLY 763

Query: 192  EEMKEKGFS 166
             EM  KG +
Sbjct: 764  NEMSSKGMT 772


>ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X1 [Citrus sinensis]
            gi|568854934|ref|XP_006481071.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X2 [Citrus sinensis]
            gi|568854936|ref|XP_006481072.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X3 [Citrus sinensis]
            gi|568854938|ref|XP_006481073.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X4 [Citrus sinensis]
            gi|568854940|ref|XP_006481074.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g26790,
            mitochondrial-like isoform X5 [Citrus sinensis]
          Length = 831

 Score =  172 bits (436), Expect = 4e-40
 Identities = 130/429 (30%), Positives = 220/429 (51%), Gaps = 2/429 (0%)
 Frame = -3

Query: 1452 QLIGMMNCLRKDPKEAISLFSQVK-DYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLL 1276
            +++  +  LRK+PK A+S F Q+K   F H++ TYA ++ +LC     + +L S L+ L+
Sbjct: 86   EVVEKLYSLRKEPKIALSFFEQLKRSGFSHNLCTYAAIVRILCCCGWQK-KLESMLLELV 144

Query: 1275 ASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFA 1096
              + + +   F   DLI+ +  E          S  LTR  +++ KAYVS+G+F++    
Sbjct: 145  RKKTDAN---FEATDLIEALCGE---------GSTLLTRLSDAMIKAYVSVGMFDEGIDI 192

Query: 1095 LSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHS 916
            L  +      V  I S ++ + +L+E GK D  ++ Y+ LK   ++ N  TY IV +   
Sbjct: 193  LFQINRRGF-VWSICSCNYFMNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIKALC 251

Query: 915  EMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDF 736
            + G   +  ++F EM     G   N     T IE LC+ G  +LGY+L  +   E D   
Sbjct: 252  KKGSMQEAVEVFLEMEKA--GVTPNAFAYSTCIEGLCMNGMLDLGYELLLK-WEEADIPL 308

Query: 735  DVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCN 556
              F      Y V+I+G C   K + A  VL    L +   GV    D   Y A++  +C 
Sbjct: 309  SAFA-----YIVVIRGFCDQNKLEKAECVL----LHMEKQGVV--PDVYAYSALISGYCK 357

Query: 555  TGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSV 379
             G I +A+ L+ ++ S+G   N  ++ +I + +   G    A+   +++++  D  F   
Sbjct: 358  FGKINKALPLHHEMTSKGIKTNCGVLSVILKGLCRNGM---ASAAIKQFLEFKDMGF--- 411

Query: 378  LIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALS 199
             +D   Y+I+++SLC++G+VE+A  L  EMK + + PDV +Y+ ++ GYC    +  AL 
Sbjct: 412  FLDKVCYDIIVDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD 471

Query: 198  IFEEMKEKG 172
            +F+EMKE G
Sbjct: 472  LFKEMKEMG 480



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 15/323 (4%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD   Y  ++  L + G+ +  +  ++ +K + I P+   Y  +   +   GK      L
Sbjct: 413  LDKVCYDIIVDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDL 472

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKY-- 709
            F EM  +        DT +TY     L G F      Y  +     K FD+    +++  
Sbjct: 473  FKEMKEMGH----KPDT-ITYN---ILAGAFAQ----YGAV----QKAFDLLNYMKRHGL 516

Query: 708  ------YKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGN 547
                  + ++I+GLC  G+ ++A   L          G   +N    Y A++  +C TG+
Sbjct: 517  EPNFVTHNMIIEGLCMGGRVEEAEAFLDGLK------GKCLEN----YSAMINGYCKTGH 566

Query: 546  IEEAVELYDDIHSRG------SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK-GSDPKF 388
             +EA +L+  + ++G      S N  +  L+        + ++A + ++  I   ++P  
Sbjct: 567  TKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILR-----DNNNALKLFKTMITLNAEPS- 620

Query: 387  GSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPA 208
                     Y+ ++ +LCQ  ++E+A  + + +  K L P +  Y+ ++ GYC+IN +  
Sbjct: 621  ------KSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLRE 674

Query: 207  ALSIFEEMKEKGFSACQT*FTLL 139
            A  +F +MK++G +     +T+L
Sbjct: 675  ARDVFNDMKQRGITPDVVTYTVL 697



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 70/344 (20%), Positives = 138/344 (40%), Gaps = 13/344 (3%)
 Frame = -3

Query: 1164 TRAVNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYY 985
            T   N L  A+   G   +    L+++K   L   +  +++ +++ L   G+ +   ++ 
Sbjct: 485  TITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEP-NFVTHNMIIEGLCMGGRVEEAEAFL 543

Query: 984  ELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELC 805
            + LK K +    E Y+ +   + + G   +  +LF  + +  +G      +C   +  L 
Sbjct: 544  DGLKGKCL----ENYSAMINGYCKTGHTKEAFQLFMRLSN--QGVLVKKSSCNKLLTNLL 597

Query: 804  LQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDAS---DVLHDYN 634
            +  +     KL+  ++    +        +  Y  LI  LC A + + A    DVL D  
Sbjct: 598  ILRDNNNALKLFKTMITLNAEP------SKSMYDKLIGALCQAEEMEQAQLVFDVLVDKG 651

Query: 633  LAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFS 454
            L               Y  ++  +C    + EA ++++D+  RG     +   +     S
Sbjct: 652  LTPHLI---------TYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHS 702

Query: 453  K------GEFDDAARFYEKYIKGS----DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAE 304
            K          DA +  E  +  S    + K   +  D   Y +++  LC    +E+   
Sbjct: 703  KINLKGSSSSPDALQCKEDVVDASVFWNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGIT 762

Query: 303  LLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
            + NE+  + L PD   Y+ALL GY    ++  A+++ +EM  KG
Sbjct: 763  VFNEISDRGLEPDTVTYTALLCGYLAKGDLDRAIALVDEMSVKG 806


>ref|XP_002880834.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297326673|gb|EFH57093.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 797

 Score =  166 bits (419), Expect = 3e-38
 Identities = 131/441 (29%), Positives = 215/441 (48%), Gaps = 2/441 (0%)
 Frame = -3

Query: 1440 MMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEE 1264
            ++N  R DP +A+S   Q+K++    ++  YA ++ +L    +D  +L+S LV L+ +EE
Sbjct: 60   LLNSTRDDPNQALSFLRQLKEHDVSPNVNAYATLVRILTSWGLDR-KLDSVLVELIKNEE 118

Query: 1263 EGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWV 1084
             G    FS++DLI+ +  E       +  S  L R   +L KAYV LG+F++    L   
Sbjct: 119  RG----FSVMDLIEVIGEE---EAEEDQRSLVLIRVSGALVKAYVGLGMFDEAIDVLFQS 171

Query: 1083 KLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGK 904
            K +   V DI + +FL+ RLIE GK   VV+ ++ LK   +  N  TYAIV +     G 
Sbjct: 172  KRLDC-VPDIKACNFLMNRLIEFGKIGMVVALFKQLKQLGLCANEYTYAIVVKALCRKGD 230

Query: 903  FDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL 724
             +    L  E  SVF        +  T+I+ LC+ GE E    L   ++   D +  V  
Sbjct: 231  LEGAAMLLLESPSVF--------SYKTFIDGLCVNGETEKAVVLIEEMI---DTNVLVGD 279

Query: 723  LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
              R  + ++++G C   K + A  V+ +         + +  D     A++ ++C   N+
Sbjct: 280  DLRTVFCMVVRGFCNEMKMEAAESVILEMEK------IGFGPDVSACSAIIDRYCKNMNL 333

Query: 543  EEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDG 367
             EA+   D +  +G   N  IV  I Q      + D      EK+ +  D    ++ +D 
Sbjct: 334  PEALGFLDKMLGKGLKINCVIVSSILQCYC---KMDMCLEALEKFKEFRDM---NIFLDR 387

Query: 366  DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
              YN+  ++L ++G+VEEA ELL EMK K + PDV +Y+ L+ GYC    +  AL + +E
Sbjct: 388  VCYNVAFDALSKLGRVEEAIELLQEMKDKGIVPDVINYTTLIDGYCLKGKVVDALDLIDE 447

Query: 186  MKEKGFSACQT*FTLLIFRLS 124
            M   G S     + +L+  L+
Sbjct: 448  MIGNGTSPDLITYNVLVSGLA 468



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 28/323 (8%)
 Frame = -3

Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
            D+ +Y+ L+  L  +G E++V+  YE +K++ + PNA T  ++     E   F +  K  
Sbjct: 456  DLITYNVLVSGLARNGHEEAVLEIYERMKAEGLKPNAVTDNVII----EGLCFARKVKEA 511

Query: 879  DEMFSVFEGAWTNTDTCLT--YIEELCLQGEFELGY------------KLYSRILIECDK 742
            ++ F   E         L   Y E    +  F+L              KL+  + IE   
Sbjct: 512  EDFFMSLEQKCPENKASLVKGYCESGLSKKAFKLFVTLEYPLRKSVYIKLFFSLCIEGCL 571

Query: 741  DFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN----DTDCYYAV 574
            D    +LKR +   +  G    GK   A   L++   A   +    +     D   Y  +
Sbjct: 572  DKAHTVLKRMWAYRVEPGRSMCGKMIGALCRLNNAIDAQQLFDTMVERGLIPDLFTYTIM 631

Query: 573  LRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDP 394
            +  +C    +++A  L++D+  RG     +   +    + K    D        ++G   
Sbjct: 632  IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL---DPEHHETGSVQGEVG 688

Query: 393  KFGSVLI----------DGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSAL 244
            K  S L+          D   Y ++++  C++ ++E+AAEL + M    L PD+  Y+AL
Sbjct: 689  KRNSELLREFSASGIGLDVVSYTVLIDRQCKMDKLEQAAELFDRMIDSGLEPDIVAYTAL 748

Query: 243  LKGYCRINNIPAALSIFEEMKEK 175
            +  Y R   I  A+++  E+ +K
Sbjct: 749  ISSYFRKGYIDKAVTLVTELSKK 771


>ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [Amborella trichopoda]
            gi|548859411|gb|ERN17091.1| hypothetical protein
            AMTR_s00044p00087550 [Amborella trichopoda]
          Length = 872

 Score =  165 bits (418), Expect = 4e-38
 Identities = 120/434 (27%), Positives = 214/434 (49%), Gaps = 4/434 (0%)
 Frame = -3

Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
            D   +I ++N L ++P  A+S F+QVK   F H++ TY+ +I +LC S +   +L   L 
Sbjct: 120  DNSNVIKVLNNLIREPLLALSFFNQVKGLGFSHNVHTYSTIIQILCSSGLHH-KLRKLLE 178

Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
             L+   +      F +  L  ++  + +G            +  + L KAY   G+F++ 
Sbjct: 179  ELVFETQN-----FEIWRLFYSLPKDCNGREAISF------KVFDGLIKAYADRGMFDE- 226

Query: 1104 KFALSWVKLVPLN--VLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIV 931
              A+  V     N  +  + S +FL+  LI++ K+D+  + +  LK     PN  T+ I+
Sbjct: 227  --AVGLVLQAGNNGCLPHVWSCNFLINYLIDNKKQDTAEALFHQLKKLGFNPNVYTFTII 284

Query: 930  ARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIE 751
             +   + GK      +  EM  +  G   +  T  T I+ +C  GE ++GYKL   I   
Sbjct: 285  VKSLCKGGKLQDALDMLTEMEEM--GIAPDAFTFTTLIDGICFNGESKMGYKLLKTIRSR 342

Query: 750  CDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVL 571
                    LL    Y ++I+G C   K D+A  VL D    +   G+    D   Y +++
Sbjct: 343  G------VLLYTFSYNIVIRGFCGEMKLDEAELVLSD----MEEQGIA--PDMYSYKSLI 390

Query: 570  RKFCNTGNIEEAVELYDDIHSRGSANSAIV-GLIFQAMFSKGEFDDAARFYEKYIKGSDP 394
              +CN GN+ +A+ L++D+ S+G   + I+ G + Q++   G   +A   +E++      
Sbjct: 391  TGYCNVGNLVKALSLHEDMISKGVKTTCIILGYLIQSLRKNGLAIEAIELFERF------ 444

Query: 393  KFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNI 214
            +   + +D   Y +V+++ C+ G  E A +L++EMK + LAPD  HY++L+ GYCR  ++
Sbjct: 445  RNSGLFLDEVLYGMVIDAYCKQGNTEVALQLMDEMKGRRLAPDSLHYTSLIDGYCRNGDL 504

Query: 213  PAALSIFEEMKEKG 172
              A  +F++M E G
Sbjct: 505  GHAYKVFKDMVETG 518



 Score = 87.4 bits (215), Expect = 2e-14
 Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 2/299 (0%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD   Y  ++    + G  +  +   + +K + + P++  Y  +   +   G      K+
Sbjct: 451  LDEVLYGMVIDAYCKQGNTEVALQLMDEMKGRRLAPDSLHYTSLIDGYCRNGDLGHAYKV 510

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
            F +M  V  G   NT T        C +G  +  + L     +EC  D  + +  R  Y 
Sbjct: 511  FKDM--VETGLEPNTVTYNILANGFCRKGLVQETFDL-----LECMLDQGL-VPNRVTYS 562

Query: 702  VLIKGLCAAGKFDDASDVLHDY-NLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVEL 526
             +I GLC  GK  DA        +  + +  V +        A++  +C   + +EA EL
Sbjct: 563  TVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFS-------AMISGYCEQRHTKEAYEL 615

Query: 525  YDD-IHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIV 349
            +   +  R   +S     +   +    + D A   +E  +         V+ D   Y+ +
Sbjct: 616  FKRLVKKRVLPSSTACSRLISNLCKDEDLDKALMVHEMMVADG------VIPDEITYSTL 669

Query: 348  MESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
            + +  Q+G + +A +L   + V+ L+PDV  Y+AL+ GYCR+N++  A  +F +MK+KG
Sbjct: 670  ISAFAQLGNMTKARDLYENLMVRGLSPDVITYTALINGYCRVNHLQEACKLFNDMKQKG 728



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 72/335 (21%), Positives = 138/335 (41%), Gaps = 29/335 (8%)
 Frame = -3

Query: 996  VSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYI 817
            +S++  +K    + N  TY+ + ++    G   ++ KL +E+  VFE             
Sbjct: 139  LSFFNQVKGLGFSHNVHTYSTIIQILCSSGLHHKLRKLLEEL--VFETQ----------- 185

Query: 816  EELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVL--- 646
                    FE+ ++L+  +  +C+    +     K +  LIK     G FD+A  ++   
Sbjct: 186  -------NFEI-WRLFYSLPKDCNGREAISF---KVFDGLIKAYADRGMFDEAVGLVLQA 234

Query: 645  ---------HDYNLAVSYYGVNWDNDTD-----------------CYYAVLRKFCNTGNI 544
                        N  ++Y   N   DT                   +  +++  C  G +
Sbjct: 235  GNNGCLPHVWSCNFLINYLIDNKKQDTAEALFHQLKKLGFNPNVYTFTIIVKSLCKGGKL 294

Query: 543  EEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGD 364
            ++A+++  ++   G A  A     F  +     F+  ++   K +K    +   VL+   
Sbjct: 295  QDALDMLTEMEEMGIAPDAFT---FTTLIDGICFNGESKMGYKLLKTIRSR--GVLLYTF 349

Query: 363  FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEM 184
             YNIV+   C   +++EA  +L++M+ + +APD+  Y +L+ GYC + N+  ALS+ E+M
Sbjct: 350  SYNIVIRGFCGEMKLDEAELVLSDMEEQGIAPDMYSYKSLITGYCNVGNLVKALSLHEDM 409

Query: 183  KEKGFSACQT*FTLLIFRLSFPSRVLESTNCFKGF 79
              KG          LI  L      +E+   F+ F
Sbjct: 410  ISKGVKTTCIILGYLIQSLRKNGLAIEAIELFERF 444



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 80/314 (25%), Positives = 128/314 (40%), Gaps = 9/314 (2%)
 Frame = -3

Query: 1050 SYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEM 871
            +Y+ L       G         E +  + + PN  TY+ V     + GK       F  +
Sbjct: 525  TYNILANGFCRKGLVQETFDLLECMLDQGLVPNRVTYSTVIYGLCKGGKLKDAESFFKTL 584

Query: 870  FSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIK 691
              V +G    + T    I   C Q   +  Y+L+ R++ +        L        LI 
Sbjct: 585  --VDKGLGHCSVTFSAMISGYCEQRHTKEAYELFKRLVKKR------VLPSSTACSRLIS 636

Query: 690  GLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIH 511
             LC     D A  ++H+  +A    GV  D  T  Y  ++  F   GN+ +A +LY+++ 
Sbjct: 637  NLCKDEDLDKAL-MVHEMMVAD---GVIPDEIT--YSTLISAFAQLGNMTKARDLYENLM 690

Query: 510  SRGSANSAIV-GLIFQAMFSKGEFDDAAR-FYEKYIKGSDPKF--GSVLIDGDFYNIVME 343
             RG +   I    +           +A + F +   KG  P     + L DG F  I+ E
Sbjct: 691  VRGLSPDVITYTALINGYCRVNHLQEACKLFNDMKQKGPRPDVITFTALFDGYFKEILQE 750

Query: 342  SLCQVGQ-----VEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKE 178
             L   G+       E  +LL EMK   L PD+  Y+ L+ G+C+IN +  A  +F+EM  
Sbjct: 751  DLRYRGKRRVQVATEIFKLLEEMKEMGLKPDLICYTVLIDGHCKINRLHDAFQLFQEMLG 810

Query: 177  KGFSACQT*FTLLI 136
            +G +     +T LI
Sbjct: 811  RGITPDIVAYTTLI 824



 Score = 72.4 bits (176), Expect = 5e-10
 Identities = 70/328 (21%), Positives = 138/328 (42%), Gaps = 14/328 (4%)
 Frame = -3

Query: 1080 LVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKF 901
            LVP  V    +YS ++  L + GK     S+++ L  K +   + T++ +   + E    
Sbjct: 554  LVPNRV----TYSTVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFSAMISGYCEQRHT 609

Query: 900  DQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLL 721
             +  +LF  +  V +    ++  C   I  LC   + +    ++  ++       D  + 
Sbjct: 610  KEAYELFKRL--VKKRVLPSSTACSRLISNLCKDEDLDKALMVHEMMVA------DGVIP 661

Query: 720  KRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIE 541
                Y  LI      G    A D+    NL V         D   Y A++  +C   +++
Sbjct: 662  DEITYSTLISAFAQLGNMTKARDLYE--NLMVR----GLSPDVITYTALINGYCRVNHLQ 715

Query: 540  EAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS------------- 400
            EA +L++D+  +G     I    F A+F  G F +  +   +Y +G              
Sbjct: 716  EACKLFNDMKQKGPRPDVIT---FTALFD-GYFKEILQEDLRY-RGKRRVQVATEIFKLL 770

Query: 399  -DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
             + K   +  D   Y ++++  C++ ++ +A +L  EM  + + PD+  Y+ L+ GYC  
Sbjct: 771  EEMKEMGLKPDLICYTVLIDGHCKINRLHDAFQLFQEMLGRGITPDIVAYTTLISGYCNR 830

Query: 222  NNIPAALSIFEEMKEKGFSACQT*FTLL 139
             N+  A ++ EEM  +G    +  +++L
Sbjct: 831  GNVKKAANLVEEMLFRGLKPDKLTYSVL 858


>ref|XP_006293706.1| hypothetical protein CARUB_v10022664mg [Capsella rubella]
            gi|482562414|gb|EOA26604.1| hypothetical protein
            CARUB_v10022664mg [Capsella rubella]
          Length = 794

 Score =  164 bits (415), Expect = 1e-37
 Identities = 132/454 (29%), Positives = 217/454 (47%), Gaps = 2/454 (0%)
 Frame = -3

Query: 1479 PPTAAPDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDR 1303
            P  +  ++  L+  +N  R DP  A+S   Q+K +    ++  YA ++ +L    +D  +
Sbjct: 47   PNLSKLNQSSLLRFLNSTRDDPSLALSFLEQLKQHGVSPNVNAYATLVRILSAWGLDR-K 105

Query: 1302 LNSALVRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSL 1123
            L+S LV L+ +EE G    F ++DLI+ +  E D           + R  ++L KAYVSL
Sbjct: 106  LDSVLVELIKNEERG----FCVMDLIEVIGEEAD--------DVVMVRGSSALVKAYVSL 153

Query: 1122 GLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAET 943
            G+F++    L  +K +   V  I S +FL+ RLIE GK D VV+ ++  K   +  N  T
Sbjct: 154  GMFDEAIDVLFQIKRLDC-VPSIKSCNFLMNRLIEFGKIDMVVALFKQRKQLGLCANEYT 212

Query: 942  YAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSR 763
            YAIV +     G      KL  +  SVF           T+IE LC  GE E        
Sbjct: 213  YAIVVKALCRKGDLQGAAKLLVDSPSVF--------VYKTFIEGLCANGETETAVDWIGE 264

Query: 762  ILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCY 583
            ++     +F V    R  Y ++++G C   K + A  V+ +  +  + +G+    D    
Sbjct: 265  MI---GMNFMVGDDLRTAYSMVVRGFCNEMKMEAAESVVLE--MEKNGFGL----DVYAC 315

Query: 582  YAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK 406
             AV+ ++C   N+ E +   D +  +G   N  IV  + Q      + D      EK+ +
Sbjct: 316  SAVIDRYCKNLNLPEVLRFLDKMLGKGLRINCGIVSSVLQCYC---QMDMCLEALEKFKE 372

Query: 405  GSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCR 226
             SD    ++ +D   YN+  ++L ++G+VEEA EL  EM  K + PDV +Y+ L+ GYC 
Sbjct: 373  FSDM---NIFLDRVCYNVAFDALGKLGRVEEAVELFREMMDKGMVPDVINYTTLINGYCL 429

Query: 225  INNIPAALSIFEEMKEKGFSACQT*FTLLIFRLS 124
               +  AL + +EM+  G S     + +L+  L+
Sbjct: 430  EGKVVDALDLIDEMRGNGISPDLITYNVLVSGLA 463



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 35/332 (10%)
 Frame = -3

Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIV------ARVHSEMGKFD 898
            D+ +Y+ L+  L  +G E+  +  Y+ +K++ + P+A T+ ++      AR   E   F 
Sbjct: 451  DLITYNVLVSGLARNGHEEEALEIYDRMKAEGLKPDAVTHNVIIEGLCFARKVKEAEDFW 510

Query: 897  QV--NKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIEC-------- 748
            +   +K  +   S+ +G       C + + +   +   EL Y L   + I+         
Sbjct: 511  KSLDDKCHENDASLVKGY------CESGLSKKAYKRFIELEYPLRKSVYIKLFFSLITEG 564

Query: 747  --DKDFDVFLLKRKYYKV---------LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWD 601
              DK  DV L K   Y+V         +I  LC +    +A  +L D  +          
Sbjct: 565  YHDKALDV-LKKMWAYRVEPGRSMCGKMIGALCRSNNAREAQ-LLFDTMIERGLIP---- 618

Query: 600  NDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFY 421
             D   Y  ++  +C    +++A +L++D+  RG     +   +    + K + +     Y
Sbjct: 619  -DLFTYTIMIHTYCRRSELQKADDLFEDMKQRGIKPDVVTYTVLLDRYLKLDAEHHETGY 677

Query: 420  ----EKYIKGSDP--KFGSVLIDGDF--YNIVMESLCQVGQVEEAAELLNEMKVKHLAPD 265
                ++  K S+   KF +  I+ D   Y ++++  C++  +E A +L + M    L PD
Sbjct: 678  VQEEKQRSKASEVLRKFTAAGIELDVVCYTVLIDRQCKIDNLENAEKLFDRMIDSGLEPD 737

Query: 264  VRHYSALLKGYCRINNIPAALSIFEEMKEKGF 169
            +  Y+ LL GYCR   I  A+++  E+ EK F
Sbjct: 738  MVAYTTLLSGYCRKGYIDKAVTLVTELSEKDF 769



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 68/319 (21%), Positives = 130/319 (40%), Gaps = 8/319 (2%)
 Frame = -3

Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
            LD   Y+     L + G+ +  V  +  +  K + P+   Y  +   +   GK      L
Sbjct: 380  LDRVCYNVAFDALGKLGRVEEAVELFREMMDKGMVPDVINYTTLINGYCLEGKVVDALDL 439

Query: 882  FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
             DEM     G   +  T    +  L   G  E   ++Y R+  E  K   V       + 
Sbjct: 440  IDEMRG--NGISPDLITYNVLVSGLARNGHEEEALEIYDRMKAEGLKPDAVT------HN 491

Query: 702  VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN-DTDCYY---AVLRKFCNTGNIEEA 535
            V+I+GLC A K  +A D               W + D  C+    ++++ +C +G  ++A
Sbjct: 492  VIIEGLCFARKVKEAEDF--------------WKSLDDKCHENDASLVKGYCESGLSKKA 537

Query: 534  VELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKY----IKGSDPKFGSVLIDG 367
             + + ++        ++   +F ++ ++G  D A    +K     ++      G ++   
Sbjct: 538  YKRFIELEY--PLRKSVYIKLFFSLITEGYHDKALDVLKKMWAYRVEPGRSMCGKMI--- 592

Query: 366  DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
                    +LC+     EA  L + M  + L PD+  Y+ ++  YCR + +  A  +FE+
Sbjct: 593  -------GALCRSNNAREAQLLFDTMIERGLIPDLFTYTIMIHTYCRRSELQKADDLFED 645

Query: 186  MKEKGFSACQT*FTLLIFR 130
            MK++G       +T+L+ R
Sbjct: 646  MKQRGIKPDVVTYTVLLDR 664


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