BLASTX nr result
ID: Paeonia24_contig00006222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00006222
(1526 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containi... 209 3e-51
ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containi... 204 9e-50
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi... 203 2e-49
ref|XP_007048252.1| Pentatricopeptide repeat-containing protein,... 194 1e-46
ref|XP_007048251.1| Pentatricopeptide repeat-containing protein,... 194 1e-46
ref|XP_007048250.1| Pentatricopeptide repeat-containing protein,... 194 1e-46
ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containi... 191 7e-46
emb|CBI34116.3| unnamed protein product [Vitis vinifera] 190 1e-45
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,... 186 3e-44
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi... 179 2e-42
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi... 179 2e-42
ref|XP_002305039.1| pentatricopeptide repeat-containing family p... 176 3e-41
ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citr... 175 4e-41
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,... 175 4e-41
ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containi... 174 9e-41
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ... 173 2e-40
ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containi... 172 4e-40
ref|XP_002880834.1| pentatricopeptide repeat-containing protein ... 166 3e-38
ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [A... 165 4e-38
ref|XP_006293706.1| hypothetical protein CARUB_v10022664mg [Caps... 164 1e-37
>ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 829
Score = 209 bits (532), Expect = 3e-51
Identities = 146/425 (34%), Positives = 223/425 (52%), Gaps = 2/425 (0%)
Frame = -3
Query: 1440 MMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEE 1264
M+N LR++P +A+S F Q+K+ F+HDI TY +I C +D +L+S + ++ +
Sbjct: 70 MLNSLREEPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDM-KLDSLFLEVINLGK 128
Query: 1263 EGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWV 1084
G F + DL + + L+ E P+ +L RA++ L KAY SL +F++ L
Sbjct: 129 RGLG--FEVSDLFEELVEGLNA----EGPN-SLVRALDGLVKAYASLRMFDEAIDVLFQT 181
Query: 1083 KLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGK 904
K L + S ++L+ RL+E GK D V+ Y+ LK S++PN TY IV + G
Sbjct: 182 KRCGFG-LSVLSCNYLMNRLVECGKVDMAVAVYKQLKRISVSPNVYTYGIVIKALCRKGN 240
Query: 903 FDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL 724
F++ +F+EM G N T TYIE LCL G +LGY + R + DV+
Sbjct: 241 FEEAVGVFEEMEKA--GETPNEFTYSTYIEGLCLYGRSDLGYDVL-RAWKGVNLPLDVYA 297
Query: 723 LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
Y +I+G K +A VL D D Y AV+ +C TGNI
Sbjct: 298 -----YTAVIRGFVNEKKLQEAEMVLLDMEEQ------GMVPDAVSYGAVINGYCTTGNI 346
Query: 543 EEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDG 367
+A+ +D + +RG +N IV LI Q + G+ DA + + K + +D
Sbjct: 347 SKALAFHDKMETRGIKSNCVIVSLILQCLCKNGKARDAVDQFSSFKKKG------IFLDE 400
Query: 366 DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
YN V+++LC++G+ EEA +LL+EMK K + PD+ HY+ L+ GYC I A+ +F+E
Sbjct: 401 VAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMGLFDE 460
Query: 186 MKEKG 172
MKEKG
Sbjct: 461 MKEKG 465
Score = 82.8 bits (203), Expect = 4e-13
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 10/292 (3%)
Frame = -3
Query: 1017 HGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNT 838
+GKE + ++ L++KS AE YA + + E+G +LF + +G
Sbjct: 520 YGKEAEI--FFNSLENKS----AENYAAMVNGYCELGNTKDAFELFVRLSK--QGVLIKR 571
Query: 837 DTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDA 658
+ L + LCL+GE+ KL+ +L D + K LI LC+AG A
Sbjct: 572 KSRLKLLSSLCLEGEYGKALKLFEIVLSLGDGICKIMCSK------LIASLCSAGDMKRA 625
Query: 657 SDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVG 478
V + + + G+ D Y +L +C ++EA+ L+DD+ RG + I
Sbjct: 626 RWVFDN----LVWRGLT--PDVVIYTMMLNGYCRVNRLQEAIYLFDDMKKRGISPDVITY 679
Query: 477 LIFQAMFSKG----------EFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQV 328
+ SK +D R + S+ + D Y ++++S C+
Sbjct: 680 TVMLDGHSKNLKRDRLSSDTSRNDRVRRDTGSVFWSEMNGMELTADVICYTVLIDSHCKS 739
Query: 327 GQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
+++A L EM + L PD Y+AL+ GYC+ ++ A + +M KG
Sbjct: 740 DNIDDAIHLFTEMIDRGLEPDSVTYTALICGYCKQGHVEMAKELVNDMWRKG 791
Score = 79.0 bits (193), Expect = 5e-12
Identities = 74/342 (21%), Positives = 138/342 (40%), Gaps = 1/342 (0%)
Frame = -3
Query: 1158 AVNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYEL 979
A N + A LG F + + L +K + DI Y+ L+ HG+ + ++
Sbjct: 402 AYNGVIDALCKLGRFEEAEKLLDEMKDKRMTP-DIVHYTTLINGYCLHGQILDAMGLFDE 460
Query: 978 LKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQ 799
+K K + P+ TY ++A S G + L D M
Sbjct: 461 MKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHM------------------------ 496
Query: 798 GEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSY 619
G KL + + V+I+GLC G +A +
Sbjct: 497 ----KGQKLMPTTVT---------------HNVIIEGLCIGGYGKEAEIFFNSLE----- 532
Query: 618 YGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGL-IFQAMFSKGEF 442
+ + Y A++ +C GN ++A EL+ + +G L + ++ +GE+
Sbjct: 533 -----NKSAENYAAMVNGYCELGNTKDAFELFVRLSKQGVLIKRKSRLKLLSSLCLEGEY 587
Query: 441 DDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
A + +E + D I + ++ SLC G ++ A + + + + L PDV
Sbjct: 588 GKALKLFEIVLSLGDG------ICKIMCSKLIASLCSAGDMKRARWVFDNLVWRGLTPDV 641
Query: 261 RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
Y+ +L GYCR+N + A+ +F++MK++G S +T+++
Sbjct: 642 VIYTMMLNGYCRVNRLQEAIYLFDDMKKRGISPDVITYTVML 683
Score = 69.3 bits (168), Expect = 4e-09
Identities = 63/297 (21%), Positives = 122/297 (41%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD+ +Y+ +++ + K ++ + + P+A +Y V + G +
Sbjct: 293 LDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGYCTTGNISKALAF 352
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
D+M + G +N ++ LC G+ +S K +FL + Y
Sbjct: 353 HDKMET--RGIKSNCVIVSLILQCLCKNGKARDAVDQFSSF-----KKKGIFLDEVAYNG 405
Query: 702 VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
V I LC G+F++A +L + D Y ++ +C G I +A+ L+
Sbjct: 406 V-IDALCKLGRFEEAEKLLDEMK------DKRMTPDIVHYTTLINGYCLHGQILDAMGLF 458
Query: 522 DDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVME 343
D++ +G I + FS+ A ++KG +V +N+++E
Sbjct: 459 DEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHMKGQKLMPTTVT-----HNVIIE 513
Query: 342 SLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
LC G +EA N ++ K +Y+A++ GYC + N A +F + ++G
Sbjct: 514 GLCIGGYGKEAEIFFNSLENK----SAENYAAMVNGYCELGNTKDAFELFVRLSKQG 566
Score = 60.8 bits (146), Expect = 2e-06
Identities = 75/351 (21%), Positives = 147/351 (41%), Gaps = 21/351 (5%)
Frame = -3
Query: 1068 NVLDISSY--SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
N ++++SY + +L L E + + +S++ LK + +TY + R G +
Sbjct: 58 NTVEVNSYWVTEMLNSLRE--EPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDMK 115
Query: 894 VNKLFDEMFSVFEGA--WTNTDTCLTYIEELCLQGEFELGYKLYSRI-----LIECDKDF 736
++ LF E+ ++ + + +D +E L +G L L + L D+
Sbjct: 116 LDSLFLEVINLGKRGLGFEVSDLFEELVEGLNAEGPNSLVRALDGLVKAYASLRMFDEAI 175
Query: 735 DV-FLLKRKYYKV-------LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYY 580
DV F KR + + L+ L GK D A V ++ + Y
Sbjct: 176 DVLFQTKRCGFGLSVLSCNYLMNRLVECGKVDMAVAVYKQLKR------ISVSPNVYTYG 229
Query: 579 AVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
V++ C GN EEAV +++++ G + F+ + + Y + G
Sbjct: 230 IVIKALCRKGNFEEAVGVFEEMEKAGETPNE---------FTYSTYIEGLCLYGRSDLGY 280
Query: 399 DP----KFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGY 232
D K ++ +D Y V+ +++EA +L +M+ + + PD Y A++ GY
Sbjct: 281 DVLRAWKGVNLPLDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGY 340
Query: 231 CRINNIPAALSIFEEMKEKGFSACQT*FTLLIFRLSFPSRVLESTNCFKGF 79
C NI AL+ ++M+ +G + +L++ L + ++ + F F
Sbjct: 341 CTTGNISKALAFHDKMETRGIKSNCVIVSLILQCLCKNGKARDAVDQFSSF 391
>ref|XP_004239474.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Solanum lycopersicum]
Length = 644
Score = 204 bits (519), Expect = 9e-50
Identities = 142/425 (33%), Positives = 222/425 (52%), Gaps = 2/425 (0%)
Frame = -3
Query: 1440 MMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEE 1264
M+N LR++P +A+S F Q+K+ F+HDI TY +I C +D +L+S + ++ +
Sbjct: 70 MLNSLREEPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDM-KLDSLFLEVINLGK 128
Query: 1263 EGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWV 1084
+G F + DL + + L+ E P+ +L RA++ L KAY SL +F++ L
Sbjct: 129 KGLG--FEVSDLFEELVEGLNA----EGPN-SLVRALDGLVKAYASLRMFDEAIDVLFQT 181
Query: 1083 KLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGK 904
K L + S ++L+ RL+E+GK D V+ Y+ LK S++PN TY IV + G
Sbjct: 182 KRCGFG-LSVLSCNYLMNRLVEYGKVDMAVAVYKQLKRISVSPNVYTYGIVIKALCRKGN 240
Query: 903 FDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL 724
F++ +F+EM G N T TYIE LC G +LGY + R + DV+
Sbjct: 241 FEEAVGVFEEMEKA--GETPNEFTYSTYIEGLCSYGRSDLGYDVL-RAWKGVNLPLDVYA 297
Query: 723 LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
Y +I+G K +A VL D D Y AV+ +C GNI
Sbjct: 298 -----YTAVIRGFVNEKKLQEAEMVLLDMEEQ------GMVPDAVSYGAVINGYCTAGNI 346
Query: 543 EEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDG 367
+A+ +D + +RG +N I LI Q + G+ DA + + K + +D
Sbjct: 347 SKALAFHDKMETRGIRSNCVIFSLILQCLCKNGKACDAVEQFSSFKKKG------IFLDE 400
Query: 366 DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
YN V+++LC++G+ EEA +LL+EMK K + PD+ HY+ L+ GYC I A+ +F+E
Sbjct: 401 VAYNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMGLFDE 460
Query: 186 MKEKG 172
MK+KG
Sbjct: 461 MKQKG 465
Score = 68.2 bits (165), Expect = 1e-08
Identities = 63/297 (21%), Positives = 123/297 (41%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD+ +Y+ +++ + K ++ + + P+A +Y V + G +
Sbjct: 293 LDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGYCTAGNISKALAF 352
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
D+M + G +N ++ LC G+ + +S K +FL + Y
Sbjct: 353 HDKMET--RGIRSNCVIFSLILQCLCKNGKACDAVEQFSSF-----KKKGIFLDEVAYNG 405
Query: 702 VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
V I LC G+F++A +L + D Y ++ +C G I +A+ L+
Sbjct: 406 V-IDALCKLGRFEEAEKLLDEMK------DKRMTPDIVHYTTLINGYCLHGQILDAMGLF 458
Query: 522 DDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVME 343
D++ +G I + FS+ A ++KG +V +N+++E
Sbjct: 459 DEMKQKGLKPDIITYNVLAGGFSRNGLVKEALHLLDHMKGQGLMPTTVT-----HNVIIE 513
Query: 342 SLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
LC G EEA + ++ K +Y+A++ GYC + N A +F + ++G
Sbjct: 514 GLCIGGYGEEAELFFDSLENK----SAENYAAMVNGYCELGNTKDAFELFVRLSKQG 566
Score = 64.7 bits (156), Expect = 1e-07
Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 21/351 (5%)
Frame = -3
Query: 1068 NVLDISSY--SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
N ++++SY + +L L E + + +S++ LK + +TY + R G +
Sbjct: 58 NTIEVNSYWVTEMLNSLRE--EPNDALSFFRQLKESGFKHDIQTYMAMIRTFCYWGMDMK 115
Query: 894 VNKLFDEMFSVFEGA--WTNTDTCLTYIEELCLQGEFELGYKLYSRI-----LIECDKDF 736
++ LF E+ ++ + + +D +E L +G L L + L D+
Sbjct: 116 LDSLFLEVINLGKKGLGFEVSDLFEELVEGLNAEGPNSLVRALDGLVKAYASLRMFDEAI 175
Query: 735 DV-FLLKRKYYKV-------LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYY 580
DV F KR + + L+ L GK D A V ++ + Y
Sbjct: 176 DVLFQTKRCGFGLSVLSCNYLMNRLVEYGKVDMAVAVYKQLKR------ISVSPNVYTYG 229
Query: 579 AVLRKFCNTGNIEEAVELYDDIHSRGSA-NSAIVGLIFQAMFSKGEFD---DAARFYEKY 412
V++ C GN EEAV +++++ G N + + S G D D R +
Sbjct: 230 IVIKALCRKGNFEEAVGVFEEMEKAGETPNEFTYSTYIEGLCSYGRSDLGYDVLRAW--- 286
Query: 411 IKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGY 232
K ++ +D Y V+ +++EA +L +M+ + + PD Y A++ GY
Sbjct: 287 ------KGVNLPLDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGY 340
Query: 231 CRINNIPAALSIFEEMKEKGFSACQT*FTLLIFRLSFPSRVLESTNCFKGF 79
C NI AL+ ++M+ +G + F+L++ L + ++ F F
Sbjct: 341 CTAGNISKALAFHDKMETRGIRSNCVIFSLILQCLCKNGKACDAVEQFSSF 391
>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 203 bits (516), Expect = 2e-49
Identities = 149/453 (32%), Positives = 230/453 (50%), Gaps = 7/453 (1%)
Frame = -3
Query: 1428 LRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGSP 1252
L+ +P A S F+Q+K+ F+H++ TYA +I +LC + E +L S L ++ S+E
Sbjct: 73 LKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRL-ERKLQSLLSEIVGSKESVLG 131
Query: 1251 -PVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
+ +L D+++ E++G S L ++ L KAYV +G+F++ AL K
Sbjct: 132 FDITALFDVLREGGGEVEGEH-----SSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRR 186
Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
V I S +FL+ RLIEHGK D V+ Y LK + PN TY I + G F++
Sbjct: 187 GF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245
Query: 894 VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
+F EM G N TC TYIE LC +LGY+ R L + D F
Sbjct: 246 AVDVFREMEEA--GVNPNAVTCSTYIEGLCSHKRSDLGYEAL-RALRAANWPIDTFA--- 299
Query: 714 KYYKVLIKGLCAAGKFDDASDVLHDY-NLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
Y +I+G C+ K +A DV D N ++ G Y A++ +C GN+ +
Sbjct: 300 --YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGY-------IYGALIHAYCKAGNLLQ 350
Query: 537 AVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDF 361
AV L++D+ S G N IV I Q + G + ++++ + + +D
Sbjct: 351 AVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEF------RDSGIFLDEVL 404
Query: 360 YNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMK 181
YNIV+++LC++G+VEEA ELLNEMK + ++ DV HY+ L+ GYC + A ++FEEMK
Sbjct: 405 YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 464
Query: 180 EKGFSACQT*FTLLI---FRLSFPSRVLESTNC 91
E+G + +L+ R LE +C
Sbjct: 465 ERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 497
Score = 72.0 bits (175), Expect = 7e-10
Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 32/335 (9%)
Frame = -3
Query: 1044 SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFS 865
S +L+ L E G VV ++ + I + Y IV ++GK ++ +L +EM
Sbjct: 371 SSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM-- 428
Query: 864 VFEGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRIL---IECD-KDFDVFL------- 724
+G + D T I CLQG+ ++ + IE D +++ +
Sbjct: 429 --KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNG 486
Query: 723 LKRKYYKVL------------------IKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN 598
LK++ ++L I+GLC AGK +A L+ D
Sbjct: 487 LKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE----------DK 536
Query: 597 DTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGS-ANSAIVGLIFQAMFSKGEFDDAARFY 421
+ Y A++ +C +A EL+ + +G + ++ +GE+D A
Sbjct: 537 CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILL 596
Query: 420 EKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALL 241
E+ + D + ++ Y ++ + C+ G ++ A + + + + + PDV Y+ ++
Sbjct: 597 ERML-ALDVEPNQIM-----YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 650
Query: 240 KGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
GYCR+N + A IF +MKE+G +T+++
Sbjct: 651 NGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685
Score = 69.7 bits (169), Expect = 3e-09
Identities = 79/367 (21%), Positives = 144/367 (39%), Gaps = 70/367 (19%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD+ Y+ L+ GK + +E +K + I P+ TY I+ S G + +L
Sbjct: 435 LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 494
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIEC--------------- 748
D + + +G N+ T IE LC+ G+ + + + +C
Sbjct: 495 LDCIGT--QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKAN 552
Query: 747 --DKDFDVF--------LLKRKYYKVLIKGLCAAGKFDDASDVLHD------------YN 634
K +++F L+K+K L+ LC G++D A +L Y
Sbjct: 553 FTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYG 612
Query: 633 LAVSYYGVNWDN-----------------DTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
+ + + D D Y ++ +C + EA ++++D+ R
Sbjct: 613 KLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKER 672
Query: 504 GSANSAIVGLIF-------------QAMFSKGEFD---DAARFYEKYIKGSDPKFGSVLI 373
G I + FSKG + DA+ F+ S+ K +
Sbjct: 673 GIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFW------SEMKEMGIKP 726
Query: 372 DGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIF 193
D Y ++++S C+ +++A L +EM + L PD+ Y+ALL C ++ A+++
Sbjct: 727 DVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLV 786
Query: 192 EEMKEKG 172
EM KG
Sbjct: 787 NEMSFKG 793
>ref|XP_007048252.1| Pentatricopeptide repeat-containing protein, putative isoform 3
[Theobroma cacao] gi|508700513|gb|EOX92409.1|
Pentatricopeptide repeat-containing protein, putative
isoform 3 [Theobroma cacao]
Length = 784
Score = 194 bits (492), Expect = 1e-46
Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 3/433 (0%)
Frame = -3
Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
D+V+++ +N L K P +A+S F+Q+ +D F HD+ TY ++ +LC D +L+S L+
Sbjct: 35 DRVEVVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDR-KLDSVLL 93
Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
++ E+ F ++DL + + L+G S L R N+L KAYVS+ +F+++
Sbjct: 94 EIIRKEKRLG---FEIMDLCEALEEGLEGE-----DSYLLVRLSNALVKAYVSVEMFDEV 145
Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
L + V I S +FL+ RLI GK D V+ Y+ LK + PN TY+I+ +
Sbjct: 146 INILFQTRRCGF-VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIK 204
Query: 924 VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
+ G ++ +F EM N TYIE LC+ G ELGY++ ++ +
Sbjct: 205 ALCKKGSLEEAFNVFREMEEA--EVRPNAFAYTTYIEGLCMHGRTELGYEVL-KVCRKAK 261
Query: 744 KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
D F Y V+I+G K A DVL D GV D Y A++R
Sbjct: 262 VPLDPFA-----YSVVIRGFSKEMKLKVAEDVLFD----AENNGVV--PDVTSYGALIRG 310
Query: 564 FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKG-EFDDAARFYEKYIKGSDPK 391
+C GNI +A++++ ++ S+G N I+ I Q++ G +F +F E G
Sbjct: 311 YCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIG---- 366
Query: 390 FGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIP 211
+ +D +N++ ++LC+ GQVEEA +LL+EMK K ++PDV +Y+ L+ GYCR +
Sbjct: 367 ---IFLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVE 423
Query: 210 AALSIFEEMKEKG 172
A ++F+EMK G
Sbjct: 424 DAWNLFKEMKNNG 436
Score = 73.2 bits (178), Expect = 3e-10
Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 28/329 (8%)
Frame = -3
Query: 1038 LLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVF 859
+L+ L + G + V+ ++ + I + + ++A + G+ ++ KL DEM
Sbjct: 342 ILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALCKGGQVEEAKKLLDEM---- 397
Query: 858 EGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
+G + D T I C QG+ E + L+ + K VF Y VL GL
Sbjct: 398 KGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVF------YSVLAGGL 451
Query: 684 CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
G A D+L+ S DT + +++ C ++EA D + +
Sbjct: 452 ARNGHAQKAVDLLN------SMEAQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGK 505
Query: 504 GSAN-SAIVGLIFQAMFSKGEFDDAARFYEK---YIKGSDPKF-GSVLIDGD-------- 364
N +A+V +A +K F + E+ K S K S+ + GD
Sbjct: 506 CLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLL 565
Query: 363 -------------FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
Y ++ + CQ G + A L N M K L PD+ Y+ ++ GYC++
Sbjct: 566 KIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKV 625
Query: 222 NNIPAALSIFEEMKEKGFSACQT*FTLLI 136
+ AL +F MKE+G +T+L+
Sbjct: 626 KLLQKALDLFNNMKERGIKPDVITYTVLL 654
>ref|XP_007048251.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao] gi|508700512|gb|EOX92408.1|
Pentatricopeptide repeat-containing protein, putative
isoform 2 [Theobroma cacao]
Length = 818
Score = 194 bits (492), Expect = 1e-46
Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 3/433 (0%)
Frame = -3
Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
D+V+++ +N L K P +A+S F+Q+ +D F HD+ TY ++ +LC D +L+S L+
Sbjct: 61 DRVEVVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDR-KLDSVLL 119
Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
++ E+ F ++DL + + L+G S L R N+L KAYVS+ +F+++
Sbjct: 120 EIIRKEKRLG---FEIMDLCEALEEGLEGE-----DSYLLVRLSNALVKAYVSVEMFDEV 171
Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
L + V I S +FL+ RLI GK D V+ Y+ LK + PN TY+I+ +
Sbjct: 172 INILFQTRRCGF-VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIK 230
Query: 924 VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
+ G ++ +F EM N TYIE LC+ G ELGY++ ++ +
Sbjct: 231 ALCKKGSLEEAFNVFREMEEA--EVRPNAFAYTTYIEGLCMHGRTELGYEVL-KVCRKAK 287
Query: 744 KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
D F Y V+I+G K A DVL D GV D Y A++R
Sbjct: 288 VPLDPFA-----YSVVIRGFSKEMKLKVAEDVLFD----AENNGVV--PDVTSYGALIRG 336
Query: 564 FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKG-EFDDAARFYEKYIKGSDPK 391
+C GNI +A++++ ++ S+G N I+ I Q++ G +F +F E G
Sbjct: 337 YCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIG---- 392
Query: 390 FGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIP 211
+ +D +N++ ++LC+ GQVEEA +LL+EMK K ++PDV +Y+ L+ GYCR +
Sbjct: 393 ---IFLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVE 449
Query: 210 AALSIFEEMKEKG 172
A ++F+EMK G
Sbjct: 450 DAWNLFKEMKNNG 462
Score = 73.2 bits (178), Expect = 3e-10
Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 28/329 (8%)
Frame = -3
Query: 1038 LLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVF 859
+L+ L + G + V+ ++ + I + + ++A + G+ ++ KL DEM
Sbjct: 368 ILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALCKGGQVEEAKKLLDEM---- 423
Query: 858 EGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
+G + D T I C QG+ E + L+ + K VF Y VL GL
Sbjct: 424 KGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVF------YSVLAGGL 477
Query: 684 CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
G A D+L+ S DT + +++ C ++EA D + +
Sbjct: 478 ARNGHAQKAVDLLN------SMEAQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGK 531
Query: 504 GSAN-SAIVGLIFQAMFSKGEFDDAARFYEK---YIKGSDPKF-GSVLIDGD-------- 364
N +A+V +A +K F + E+ K S K S+ + GD
Sbjct: 532 CLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLL 591
Query: 363 -------------FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
Y ++ + CQ G + A L N M K L PD+ Y+ ++ GYC++
Sbjct: 592 KIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKV 651
Query: 222 NNIPAALSIFEEMKEKGFSACQT*FTLLI 136
+ AL +F MKE+G +T+L+
Sbjct: 652 KLLQKALDLFNNMKERGIKPDVITYTVLL 680
>ref|XP_007048250.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508700511|gb|EOX92407.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 792
Score = 194 bits (492), Expect = 1e-46
Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 3/433 (0%)
Frame = -3
Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
D+V+++ +N L K P +A+S F+Q+ +D F HD+ TY ++ +LC D +L+S L+
Sbjct: 35 DRVEVVQTLNNLIKQPNKALSFFNQLNEDGFFHDLCTYTAIVRILCYWGWDR-KLDSVLL 93
Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
++ E+ F ++DL + + L+G S L R N+L KAYVS+ +F+++
Sbjct: 94 EIIRKEKRLG---FEIMDLCEALEEGLEGE-----DSYLLVRLSNALVKAYVSVEMFDEV 145
Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
L + V I S +FL+ RLI GK D V+ Y+ LK + PN TY+I+ +
Sbjct: 146 INILFQTRRCGF-VPHIFSCNFLMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIK 204
Query: 924 VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
+ G ++ +F EM N TYIE LC+ G ELGY++ ++ +
Sbjct: 205 ALCKKGSLEEAFNVFREMEEA--EVRPNAFAYTTYIEGLCMHGRTELGYEVL-KVCRKAK 261
Query: 744 KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
D F Y V+I+G K A DVL D GV D Y A++R
Sbjct: 262 VPLDPFA-----YSVVIRGFSKEMKLKVAEDVLFD----AENNGVV--PDVTSYGALIRG 310
Query: 564 FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKG-EFDDAARFYEKYIKGSDPK 391
+C GNI +A++++ ++ S+G N I+ I Q++ G +F +F E G
Sbjct: 311 YCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIG---- 366
Query: 390 FGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIP 211
+ +D +N++ ++LC+ GQVEEA +LL+EMK K ++PDV +Y+ L+ GYCR +
Sbjct: 367 ---IFLDEVCHNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVE 423
Query: 210 AALSIFEEMKEKG 172
A ++F+EMK G
Sbjct: 424 DAWNLFKEMKNNG 436
Score = 73.2 bits (178), Expect = 3e-10
Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 28/329 (8%)
Frame = -3
Query: 1038 LLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVF 859
+L+ L + G + V+ ++ + I + + ++A + G+ ++ KL DEM
Sbjct: 342 ILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVCHNVIADALCKGGQVEEAKKLLDEM---- 397
Query: 858 EGAWTNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
+G + D T I C QG+ E + L+ + K VF Y VL GL
Sbjct: 398 KGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVF------YSVLAGGL 451
Query: 684 CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
G A D+L+ S DT + +++ C ++EA D + +
Sbjct: 452 ARNGHAQKAVDLLN------SMEAQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGK 505
Query: 504 GSAN-SAIVGLIFQAMFSKGEFDDAARFYEK---YIKGSDPKF-GSVLIDGD-------- 364
N +A+V +A +K F + E+ K S K S+ + GD
Sbjct: 506 CLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLL 565
Query: 363 -------------FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
Y ++ + CQ G + A L N M K L PD+ Y+ ++ GYC++
Sbjct: 566 KIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKV 625
Query: 222 NNIPAALSIFEEMKEKGFSACQT*FTLLI 136
+ AL +F MKE+G +T+L+
Sbjct: 626 KLLQKALDLFNNMKERGIKPDVITYTVLL 654
>ref|XP_004295544.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 515
Score = 191 bits (485), Expect = 7e-46
Identities = 134/436 (30%), Positives = 231/436 (52%), Gaps = 3/436 (0%)
Frame = -3
Query: 1470 AAPDKVQLIGMMNCLRKDPKEAISLFSQVK-DYFRHDILTYAKVIGMLCDSSIDEDRLNS 1294
A + ++++ +N + P A LF ++K D FRH++LTY ++ +LC +D +L+S
Sbjct: 89 ADSETLEVVNKLNSCKTKPNSAFLLFCKLKEDGFRHNVLTYCALVRILCYWRLDR-KLDS 147
Query: 1293 ALVRLLASEEEGSPPV-FSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGL 1117
+ L+ +GS V F L DL++ + E++ SP++ R ++L K+ V+L +
Sbjct: 148 LFLELI----KGSGDVGFGLKDLLEAMEEEVE-------VSPSIVRGFDALVKSLVNLNM 196
Query: 1116 FNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYA 937
F+ L + V I + ++L+ RLIE G+ + +S Y+ LK + PN TYA
Sbjct: 197 FDDAIDVLFHTRRRGF-VQHIFTINYLMNRLIECGELGAALSIYKQLKGIGLVPNDYTYA 255
Query: 936 IVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
IV + G+ ++ ++F+EM G + YIE LC +G ++G ++L
Sbjct: 256 IVIKGFCMEGRLEEAGEVFEEM--ELAGVAPSVFAYTAYIEGLCNKGRSDVG----CQVL 309
Query: 756 IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYA 577
C ++ LL YK +I+G C KFD+A + D D+ Y A
Sbjct: 310 QYCKREN--ILLDAYAYKAVIRGFCDEMKFDEAESLFLDMEKQ------GMVPDSCIYSA 361
Query: 576 VLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
++ +C N+ +A+ L++D+ S+G N IVG I Q + G +A + ++
Sbjct: 362 MIGGYCKNYNLLKALALHNDMVSKGIKTNCVIVGFILQCLCKIGMATEAVDQFLEF---- 417
Query: 399 DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRIN 220
K + +D YNI +++LC++ +VEEA+ELL EMK+K+++ D+ HY+ L+KGYC +
Sbjct: 418 --KSMGIYLDEVTYNIAVDALCRLSRVEEASELLEEMKLKNMSLDIMHYTTLIKGYCLLG 475
Query: 219 NIPAALSIFEEMKEKG 172
+ A +I EEM EKG
Sbjct: 476 KVVDASNILEEMHEKG 491
>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 190 bits (483), Expect = 1e-45
Identities = 145/452 (32%), Positives = 222/452 (49%), Gaps = 6/452 (1%)
Frame = -3
Query: 1428 LRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGSP 1252
L+ +P A S F+Q+K+ F+H++ TYA +I +LC + E +L S L ++ S+E
Sbjct: 73 LKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRL-ERKLQSLLSEIVGSKESVLG 131
Query: 1251 -PVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
+ +L D+++ E++G S L ++ L KAYV +G+F++ AL K
Sbjct: 132 FDITALFDVLREGGGEVEGEH-----SSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRR 186
Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
V I S +FL+ RLIEHGK D V+ Y LK + PN TY I + G F++
Sbjct: 187 GF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245
Query: 894 VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
+F EM G N TC TYIE LC +LGY+ R L + D F
Sbjct: 246 AVDVFREMEEA--GVNPNAVTCSTYIEGLCSHKRSDLGYEAL-RALRAANWPIDTFA--- 299
Query: 714 KYYKVLIKGLCAAGKFDDASDVLHD-YNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
Y +I+G C+ K +A DV D N ++ D Y A++ +C GN+ +
Sbjct: 300 --YTAVIRGFCSEMKLKEAEDVFIDMVNEGIA-------PDGYIYGALIHAYCKAGNLLQ 350
Query: 537 AVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFY 358
AV L++D+ S G + + D F + + +D Y
Sbjct: 351 AVALHNDMVSNGIKTNLV--------------DQFKEFRD----------SGIFLDEVLY 386
Query: 357 NIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKE 178
NIV+++LC++G+VEEA ELLNEMK + ++ DV HY+ L+ GYC + A ++FEEMKE
Sbjct: 387 NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 446
Query: 177 KGFSACQT*FTLLI---FRLSFPSRVLESTNC 91
+G + +L+ R LE +C
Sbjct: 447 RGIEPDIVTYNILVGGFSRNGLKKEALELLDC 478
Score = 72.8 bits (177), Expect = 4e-10
Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 10/319 (3%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD Y+ ++ L + GK + V +K + ++ + Y + + GK +
Sbjct: 381 LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNM 440
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
F+EM + D +TY + + G G K + L++C + + +
Sbjct: 441 FEEM----KERGIEPDI-VTY--NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNR 493
Query: 702 VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
+ I+GLC AGK +A L+ D + Y A++ +C +A EL+
Sbjct: 494 I-IEGLCMAGKVKEAEAFLNTLE----------DKCLENYSAMVDGYCKANFTRKAYELF 542
Query: 522 DDIHSRG---------SANSAIVGLIFQAMFSKGEFDDAARFYEKYI-KGSDPKFGSVLI 373
+ +G N + G + A G+ A ++ + +G P
Sbjct: 543 SRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP------- 595
Query: 372 DGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIF 193
D Y +++ C+V + EA ++ N+MK + + PDV Y+ +L G+ + NN+ A++++
Sbjct: 596 DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLY 655
Query: 192 EEMKEKGFSACQT*FTLLI 136
+EM +G +T L+
Sbjct: 656 DEMIARGLQPDIVTYTALL 674
Score = 65.5 bits (158), Expect = 6e-08
Identities = 65/319 (20%), Positives = 145/319 (45%), Gaps = 6/319 (1%)
Frame = -3
Query: 1026 LIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAW 847
++ +G + ++V ++ + I + Y IV ++GK ++ +L +EM +G
Sbjct: 358 MVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM----KGRR 413
Query: 846 TNTDTC--LTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAG 673
+ D T I CLQG+ ++ + E + D+ Y +L+ G G
Sbjct: 414 MSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK-ERGIEPDIVT-----YNILVGGFSRNG 467
Query: 672 KFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSAN 493
+A ++L + G+ ++ T + ++ C G ++EA + + + N
Sbjct: 468 LKKEALELLD----CIGTQGLKPNSAT--HNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN 521
Query: 492 -SAIVGLIFQAMFSKGEFDDAARFYEKYIK---GSDPKFGSVLIDGDFYNIVMESLCQVG 325
SA+V +A F++ ++ +R ++ I D + ++ Y ++ + C+ G
Sbjct: 522 YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIM-----YGKLIGAFCRDG 576
Query: 324 QVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FT 145
++ A + + + + + PDV Y+ ++ GYCR+N + A IF +MKE+G +T
Sbjct: 577 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 636
Query: 144 LLIFRLSFPSRVLESTNCF 88
+++ S + + ++ N +
Sbjct: 637 VVLDGHSKTNNLQDAINLY 655
Score = 59.3 bits (142), Expect = 4e-06
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 4/286 (1%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD+ Y+ L+ GK + +E +K + I P+ TY I+ S G + +L
Sbjct: 416 LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 475
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
D + + +G N+ T IE LC+ G+ + + + +C ++ Y
Sbjct: 476 LDCIGT--QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----------YS 523
Query: 702 VLIKGLCAAGKFDDASDVLHDYNLA--VSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVE 529
++ G C A A ++ + + ++ + + Y ++ FC G+++ A
Sbjct: 524 AMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 583
Query: 528 LYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAAR--FYEKYIKGSDPKFGSVLIDGDFYN 355
++D + RG I + + + AR F + +G P D Y
Sbjct: 584 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP-------DVITYT 636
Query: 354 IVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINN 217
+V++ + +++A L +EM + L PD+ Y+ALL G C +
Sbjct: 637 VVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGS 682
>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 913
Score = 186 bits (471), Expect = 3e-44
Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 8/438 (1%)
Frame = -3
Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
D +++ ++ L+ P A+S F+Q+KD F+HDI TYA +I +LC + + + L
Sbjct: 65 DSFKVVDILYNLKNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLD 124
Query: 1284 RLLASEEEGSPP--VFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFN 1111
+ S + P + LD + +++D + S +++ ++L KAYVS+G+F+
Sbjct: 125 IIYVSCNDNDTPFEISHFLDTLSDGFVDVDSKK----QSLFMSKVYDALVKAYVSVGMFD 180
Query: 1110 Q---IKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETY 940
+ F + + VP I +FL+ LI++ K D ++ Y+ LK ++PN TY
Sbjct: 181 DAIDVLFQMGRRRFVP----HIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTY 236
Query: 939 AIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLT-YIEELCLQGEFELGYKLYSR 763
AIV + G ++ + EM E T T T YIE LC+ +LGY++
Sbjct: 237 AIVIKALCINGSLEEAMYVIKEME---ESGITPTGFAYTAYIEGLCVNEMSDLGYQV--- 290
Query: 762 ILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCY 583
++ K ++ L Y V ++G C KFD A VL D D CY
Sbjct: 291 --LQAWKGANI-PLDMYAYTVAVRGFCNELKFDKAESVLRDMEKE------GMVPDMHCY 341
Query: 582 YAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK 406
A++ +FC GN+ +A +++ S+G N IVG I + G + + ++
Sbjct: 342 TALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQF-- 399
Query: 405 GSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCR 226
K + +DG YN V+++LC++G++EEA LL+EMK+K + DV HY+ L+ GYC
Sbjct: 400 ----KSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCC 455
Query: 225 INNIPAALSIFEEMKEKG 172
N+ A +FEEM+E G
Sbjct: 456 QGNVVDAFKVFEEMRENG 473
Score = 84.0 bits (206), Expect = 2e-13
Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 35/363 (9%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
+D+ +Y L+ +G ++ + ++++ + PN+ TY +V GK + +
Sbjct: 476 IDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAV 535
Query: 882 F--------DEMFSVFEGAW--TNTDTCLTYIEELCLQGEFELG--YKLYSRILIECDKD 739
F D F++ G +T L ++G + Y L + E D D
Sbjct: 536 FNSIEDKSLDNYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDND 595
Query: 738 FDVFLLK----------RKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTD 589
+ LL+ + Y L LC AG +++ + W D
Sbjct: 596 GILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKR---GWTPDLI 652
Query: 588 CYYAVLRKFCNTGNIEEAVELYDDIHSRG-------------SANSAIVGLIFQAMFSKG 448
Y ++ +C ++EAV+L+ D+ RG + A + ++ A +KG
Sbjct: 653 AYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKG 712
Query: 447 EFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAP 268
+D ++ ++ K + D FY ++++ C+V + +A + +EM + L P
Sbjct: 713 GNED---IFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEP 769
Query: 267 DVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLIFRLSFPSRVLESTNCF 88
D+ Y+ALL G C+ ++ A+++ ++M KG S + L+ + +R + C
Sbjct: 770 DIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGI-LKTRQCSAPQCL 828
Query: 87 KGF 79
K F
Sbjct: 829 KYF 831
>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Cucumis sativus]
Length = 795
Score = 179 bits (455), Expect = 2e-42
Identities = 139/436 (31%), Positives = 218/436 (50%), Gaps = 5/436 (1%)
Frame = -3
Query: 1464 PDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSAL 1288
P KV + ++ LR++PK A S F ++++ F+H+I TYA +I +LC + +L +
Sbjct: 59 PSKV--VQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGR-KLETLF 115
Query: 1287 VRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQ 1108
+ L+ S++ F +LDLI+++ G V S R ++L KAYVS+ LF+
Sbjct: 116 LNLIGSKKVE----FDVLDLIESLN---QGCVVDAS----FIRVYDALIKAYVSVNLFDS 164
Query: 1107 IK---FALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYA 937
+ F L VP I + ++LL RLIEHGK + + YE LK PN TYA
Sbjct: 165 VVDLLFRLGRKGFVP----HIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYA 220
Query: 936 IVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
V + ++GK ++ +F+EM G N C YIE LC GY+L
Sbjct: 221 TVIKGLCKIGKMEKAIDIFEEMSGY--GMVPNAFACAAYIEALCTHDCSTSGYQLLQAWR 278
Query: 756 IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYA 577
E +F + Y V+I+G C K D+A V D + YGV D T Y
Sbjct: 279 AE------LFPIDTYAYTVVIRGFCDEMKIDEAESVFLD----MENYGVVPDAQT--YGV 326
Query: 576 VLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
++ +C N+++A+ L+ + S+G +N IV I Q + + + K +G
Sbjct: 327 LINGYCKKLNLQKALSLHSLMLSKGIKSNCVIVSFILQCFLRMQMYSEVVNQF-KVFQGK 385
Query: 399 DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRIN 220
V +D YNIV+ +LC++G++EEA ELL EM + + DV HY+ ++KG
Sbjct: 386 -----GVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMIKGLFAQG 440
Query: 219 NIPAALSIFEEMKEKG 172
I A+ +FE +K+ G
Sbjct: 441 KIHEAMMMFENLKKNG 456
Score = 85.1 bits (209), Expect = 8e-14
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 33/342 (9%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
+D+ Y+ ++K L GK + +E LK + P++ TY+++A S G +V L
Sbjct: 424 MDVMHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDL 483
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL------- 724
D M G + IE LC+ G+ + ++++ + ++ ++ +
Sbjct: 484 LDYMEE--HGLRKDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVDNYAAMINGYCAAS 541
Query: 723 ------------------LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN 598
++R L+ LC A +V+ + +N +
Sbjct: 542 DTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMKQLPV------MNVEA 595
Query: 597 DTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKG--EFDDAARF 424
Y V+ C N++ A L+D + G I LI M G + +
Sbjct: 596 KEIVYNKVIASLCRVKNMKMAQCLFDCLVRAG----LIPDLITYTMMINGYCKINYLREA 651
Query: 423 YEKYI----KGSDPKFG--SVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
YE +G +P +VL+DG F + + C ++ + + NEMK + PDV
Sbjct: 652 YELLCDMRNRGREPDIFVYTVLLDGGFKTSLQK--CSSVEIALTSSIFNEMKDMKITPDV 709
Query: 261 RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
+Y+ L+ GYC++NN+ A +FEEM ++G A +T L+
Sbjct: 710 VYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTALL 751
Score = 82.0 bits (201), Expect = 6e-13
Identities = 70/321 (21%), Positives = 140/321 (43%), Gaps = 9/321 (2%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
+D +Y+ +++ + K D S + +++ + P+A+TY ++ + + + L
Sbjct: 284 IDTYAYTVVIRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSL 343
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVF-----LLK 718
M S +G +N C+ F L L ++ E F VF L
Sbjct: 344 HSLMLS--KGIKSN-----------CVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLD 390
Query: 717 RKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
Y +++ LC GK ++A ++L + D Y +++ G I E
Sbjct: 391 NVVYNIVVHALCELGKLEEAIELLEEMTSR------QIQMDVMHYTTMIKGLFAQGKIHE 444
Query: 537 AVELYDDIHSRGSANSAIVGLIFQAMFSKG----EFDDAARFYEKYIKGSDPKFGSVLID 370
A+ +++++ G +I + A FS+ + D + E++ DPK ++I
Sbjct: 445 AMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKDPKMPDLII- 503
Query: 369 GDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFE 190
E+LC G+V+EA E+ N ++VK V +Y+A++ GYC ++ +A +F
Sbjct: 504 --------ENLCIGGKVKEATEIFNSLEVK----TVDNYAAMINGYCAASDTKSAYKLFV 551
Query: 189 EMKEKGFSACQT*FTLLIFRL 127
+ ++G ++ L+ RL
Sbjct: 552 NLSKEGIFIRRSSLVRLVSRL 572
>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Cucumis sativus]
Length = 920
Score = 179 bits (455), Expect = 2e-42
Identities = 139/436 (31%), Positives = 218/436 (50%), Gaps = 5/436 (1%)
Frame = -3
Query: 1464 PDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSAL 1288
P KV + ++ LR++PK A S F ++++ F+H+I TYA +I +LC + +L +
Sbjct: 59 PSKV--VQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGR-KLETLF 115
Query: 1287 VRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQ 1108
+ L+ S++ F +LDLI+++ G V S R ++L KAYVS+ LF+
Sbjct: 116 LNLIGSKKVE----FDVLDLIESLN---QGCVVDAS----FIRVYDALIKAYVSVNLFDS 164
Query: 1107 IK---FALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYA 937
+ F L VP I + ++LL RLIEHGK + + YE LK PN TYA
Sbjct: 165 VVDLLFRLGRKGFVP----HIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYA 220
Query: 936 IVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
V + ++GK ++ +F+EM G N C YIE LC GY+L
Sbjct: 221 TVIKGLCKIGKMEKAIDIFEEMSGY--GMVPNAFACAAYIEALCTHDCSTSGYQLLQAWR 278
Query: 756 IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYA 577
E +F + Y V+I+G C K D+A V D + YGV D T Y
Sbjct: 279 AE------LFPIDTYAYTVVIRGFCDEMKIDEAESVFLD----MENYGVVPDAQT--YGV 326
Query: 576 VLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS 400
++ +C N+++A+ L+ + S+G +N IV I Q + + + K +G
Sbjct: 327 LINGYCKKLNLQKALSLHSLMLSKGIKSNCVIVSFILQCFLRMQMYSEVVNQF-KVFQGK 385
Query: 399 DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRIN 220
V +D YNIV+ +LC++G++EEA ELL EM + + DV HY+ ++KG
Sbjct: 386 -----GVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMIKGLFAQG 440
Query: 219 NIPAALSIFEEMKEKG 172
I A+ +FE +K+ G
Sbjct: 441 KIHEAMMMFENLKKNG 456
Score = 85.1 bits (209), Expect = 8e-14
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 33/342 (9%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
+D+ Y+ ++K L GK + +E LK + P++ TY+++A S G +V L
Sbjct: 424 MDVMHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDL 483
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL------- 724
D M G + IE LC+ G+ + ++++ + ++ ++ +
Sbjct: 484 LDYMEE--HGLRKDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVDNYAAMINGYCAAS 541
Query: 723 ------------------LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN 598
++R L+ LC A +V+ + +N +
Sbjct: 542 DTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMKQLPV------MNVEA 595
Query: 597 DTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKG--EFDDAARF 424
Y V+ C N++ A L+D + G I LI M G + +
Sbjct: 596 KEIVYNKVIASLCRVKNMKMAQCLFDCLVRAG----LIPDLITYTMMINGYCKINYLREA 651
Query: 423 YEKYI----KGSDPKFG--SVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
YE +G +P +VL+DG F + + C ++ + + NEMK + PDV
Sbjct: 652 YELLCDMRNRGREPDIFVYTVLLDGGFKTSLQK--CSSVEIALTSSIFNEMKDMKITPDV 709
Query: 261 RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
+Y+ L+ GYC++NN+ A +FEEM ++G A +T L+
Sbjct: 710 VYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTALL 751
Score = 82.0 bits (201), Expect = 6e-13
Identities = 70/321 (21%), Positives = 140/321 (43%), Gaps = 9/321 (2%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
+D +Y+ +++ + K D S + +++ + P+A+TY ++ + + + L
Sbjct: 284 IDTYAYTVVIRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSL 343
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVF-----LLK 718
M S +G +N C+ F L L ++ E F VF L
Sbjct: 344 HSLMLS--KGIKSN-----------CVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLD 390
Query: 717 RKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEE 538
Y +++ LC GK ++A ++L + D Y +++ G I E
Sbjct: 391 NVVYNIVVHALCELGKLEEAIELLEEMTSR------QIQMDVMHYTTMIKGLFAQGKIHE 444
Query: 537 AVELYDDIHSRGSANSAIVGLIFQAMFSKG----EFDDAARFYEKYIKGSDPKFGSVLID 370
A+ +++++ G +I + A FS+ + D + E++ DPK ++I
Sbjct: 445 AMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKDPKMPDLII- 503
Query: 369 GDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFE 190
E+LC G+V+EA E+ N ++VK V +Y+A++ GYC ++ +A +F
Sbjct: 504 --------ENLCIGGKVKEATEIFNSLEVK----TVDNYAAMINGYCAASDTKSAYKLFV 551
Query: 189 EMKEKGFSACQT*FTLLIFRL 127
+ ++G ++ L+ RL
Sbjct: 552 NLSKEGIFIRRSSLVRLVSRL 572
>ref|XP_002305039.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848003|gb|EEE85550.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 800
Score = 176 bits (445), Expect = 3e-41
Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 5/448 (1%)
Frame = -3
Query: 1452 QLIGMMNCLRKDPKEAISLFSQVKDYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLA 1273
+++ + L+ P A S+FS +K+ DI YA +I +LC + + L+S + L
Sbjct: 68 KIVDTLYNLKNQPHLAFSIFSHLKN---PDIPAYAAIIRILCHWGLHK-MLHSIFLHLHQ 123
Query: 1272 SEEE-GSPPVFSLLDLIQT---VAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
+ + S + LLD + + I+L+ + S L + ++L K+YV+ G+ ++
Sbjct: 124 NNNDFTSFDISHLLDTLSLPHHIDIDLEKEDTVKHRSSFLIQVYDALVKSYVTAGMLDEA 183
Query: 1104 KFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVAR 925
AL +K + I ++++L+ +LI +GK D+ ++ Y+ LKS + PN TY+I+ +
Sbjct: 184 INALFQIKRRGF-LPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIK 242
Query: 924 VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECD 745
G + + +F EM G N TYIE LC + GY++ + E +
Sbjct: 243 AFCRKGSLVEASNVFQEMELC--GVIPNAYAYTTYIEGLCANQRSDFGYQVL-QAWKEGN 299
Query: 744 KDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRK 565
DV+ Y +I+G C K D A VL D +D CY ++R
Sbjct: 300 IPIDVYA-----YVAVIRGFCNEMKMDRAEVVLGDMEKQELI------SDARCYSELIRG 348
Query: 564 FCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKF 388
+C G++ +A+ L++D+ S+G N IV I Q KG ++++ K
Sbjct: 349 YCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRF------KD 402
Query: 387 GSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPA 208
+ +D YNIV+++LC++ +V++A LL+EMK K + D+ HY+ L+ GYC + +
Sbjct: 403 LRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVD 462
Query: 207 ALSIFEEMKEKGFSACQT*FTLLIFRLS 124
A +FEEM+ KG F +L+ S
Sbjct: 463 AFRVFEEMEGKGLEPDVVTFNILLAAFS 490
Score = 75.5 bits (184), Expect = 6e-11
Identities = 71/342 (20%), Positives = 147/342 (42%), Gaps = 2/342 (0%)
Frame = -3
Query: 1155 VNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELL 976
V+++ + + G+ +Q+ K + + LD SY+ ++ L + K D V+ + +
Sbjct: 377 VSTILQYFCEKGMHSQVVEEFKRFKDLRI-FLDEVSYNIVVDALCKLEKVDQAVALLDEM 435
Query: 975 KSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQG 796
K K + + Y + + +GK ++F+EM +G + T + +G
Sbjct: 436 KGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEG--KGLEPDVVTFNILLAAFSRRG 493
Query: 795 EFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYY 616
KLY + + K + + V+I+GLC GK +A +++
Sbjct: 494 LANEALKLYEYMKSQDLKPNAIT------HNVMIEGLCIGGKVTEAE----------AFF 537
Query: 615 GVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSA-NSAIVGLIFQAMFSKGEFD 439
D D Y A++ +C + E+A EL+ ++ RG + + + + + +GE D
Sbjct: 538 CNMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKD 597
Query: 438 DAARFYEKYIK-GSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
A + + +P D Y V+ + + G + A + + ++ L PD+
Sbjct: 598 RALWLLKTMLDLNMEPS-------KDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDI 650
Query: 261 RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
Y+ ++ CR N + A ++F++MK +G FT+L+
Sbjct: 651 FTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLL 692
Score = 67.0 bits (162), Expect = 2e-08
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 7/303 (2%)
Frame = -3
Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
D+ +++ LL G + + YE +KS+ + PNA T+ ++ GK + F
Sbjct: 478 DVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFF 537
Query: 879 DEMFSVFEGAWTNTDTCLT-YIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
M + + N +T Y E + EL ++L R L L+ R Y
Sbjct: 538 CNME---DKSIDNYGAMITGYCEAKHTEKASELFFELSERGL----------LMDRGYIY 584
Query: 702 VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELY 523
L++ LC G+ D A +L + +N + D Y V+ G++ A ++
Sbjct: 585 KLLEKLCEEGEKDRALWLLK------TMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVF 638
Query: 522 DDIHSRGSANSAIVGLIFQAMFSKGEFDDAAR--FYEKYIKGSDPKFGS--VLIDGDFYN 355
D + G + + AR F + +G P + VL+DG
Sbjct: 639 DILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKR 698
Query: 354 IVMESLCQVGQVEE--AAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMK 181
+ E+ + + A+ + EM+ + PDV Y+AL+ G+C+++ + A+ +++EM
Sbjct: 699 VHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMM 758
Query: 180 EKG 172
+G
Sbjct: 759 YRG 761
>ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citrus clementina]
gi|557531495|gb|ESR42678.1| hypothetical protein
CICLE_v10011094mg [Citrus clementina]
Length = 810
Score = 175 bits (444), Expect = 4e-41
Identities = 129/429 (30%), Positives = 221/429 (51%), Gaps = 2/429 (0%)
Frame = -3
Query: 1452 QLIGMMNCLRKDPKEAISLFSQVK-DYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLL 1276
+++ + LRK+PK A+S F Q+K F H++ TYA ++ +LC + +L S L+ L+
Sbjct: 65 EVVEKLYSLRKEPKIALSFFEQLKRSGFSHNLCTYAAIVRILCCCGWQK-KLESMLLELV 123
Query: 1275 ASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFA 1096
+ + + F DLI+ + E S LTR +++ KAYVS+G+F+++
Sbjct: 124 RKKTDAN---FEATDLIEALCGE---------GSTLLTRLSDAMIKAYVSVGMFDEVIDI 171
Query: 1095 LSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHS 916
L + V I S ++ + +L+E GK D ++ Y+ LK ++ N TY IV +
Sbjct: 172 LFQINRRGF-VWSICSCNYFMNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIKALC 230
Query: 915 EMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDF 736
+ G + ++F EM G N T IE LC+ G +LGY+L + E D
Sbjct: 231 KKGSMQEAVEVFLEMEKA--GVTPNAFAYSTCIEGLCMNGMLDLGYELLLK-WEEADIPL 287
Query: 735 DVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCN 556
F Y V+I+G C K + A VL L + GV D Y A++ +C
Sbjct: 288 SAFA-----YTVVIRGFCDQNKLEKAECVL----LHMEKQGVV--PDVYAYSALISGYCK 336
Query: 555 TGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSV 379
G I +A+ L+ ++ S+G N ++ +I + + G A+ +++++ D F
Sbjct: 337 FGKINKALPLHHEMTSKGIKTNCGVLSVILKGLCRNGM---ASAAIKQFLEFKDMGF--- 390
Query: 378 LIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALS 199
+D Y+++++SLC++G+VE+A L EMK + + PDV +Y+ ++ GYC + AL
Sbjct: 391 FLDKVCYDVIVDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD 450
Query: 198 IFEEMKEKG 172
+F+EMKE G
Sbjct: 451 LFKEMKEMG 459
Score = 74.3 bits (181), Expect = 1e-10
Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 15/323 (4%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD Y ++ L + G+ + + +E +K + I P+ Y + + GK L
Sbjct: 392 LDKVCYDVIVDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDL 451
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKY-- 709
F EM + + +TY L G F Y + K FD+ +++
Sbjct: 452 FKEMKEM-----GHKPDIITYN---ILAGAFAQ----YGAV----QKAFDLLNYMKRHGL 495
Query: 708 ------YKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGN 547
+ ++I+GLC G+ ++A L G +N Y A++ +C TG+
Sbjct: 496 EPNFVTHNMIIEGLCMGGRVEEAEAFLDGLK------GKCLEN----YSAMINGYCKTGH 545
Query: 546 IEEAVELYDDIHSRG------SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK-GSDPKF 388
+EA +L+ + ++G S N + L+ + ++A + ++ I ++P
Sbjct: 546 TKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILR-----DNNNALKLFKTMITLNAEPS- 599
Query: 387 GSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPA 208
Y+ ++ +LCQ ++E+A + + + K L P + Y+ ++ GYC+IN +
Sbjct: 600 ------KSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLRE 653
Query: 207 ALSIFEEMKEKGFSACQT*FTLL 139
A +F +MK++G + +T+L
Sbjct: 654 ARDVFNDMKQRGITPDVVTYTVL 676
Score = 63.9 bits (154), Expect = 2e-07
Identities = 87/434 (20%), Positives = 168/434 (38%), Gaps = 14/434 (3%)
Frame = -3
Query: 1431 CLRKDPKEAISLFSQVKD-YFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGS 1255
C + ++A+ LF ++KD D++ Y +I C + +L AL +E G
Sbjct: 405 CKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCF----QGKLGDALDLFKEMKEMGH 460
Query: 1254 PPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
P D+I N L A+ G + L+++K
Sbjct: 461 KP-----DII----------------------TYNILAGAFAQYGAVQKAFDLLNYMKRH 493
Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
L + +++ +++ L G+ + ++ + LK K + E Y+ + + + G +
Sbjct: 494 GLEP-NFVTHNMIIEGLCMGGRVEEAEAFLDGLKGKCL----ENYSAMINGYCKTGHTKE 548
Query: 894 VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
+LF + + +G +C + L + + KL+ ++ + +
Sbjct: 549 AFQLFMRLSN--QGVLVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNAEP------SK 600
Query: 714 KYYKVLIKGLCAAGKFDDAS---DVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
Y LI LC A + + A DVL D L Y ++ +C +
Sbjct: 601 SMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLI---------TYTMMIHGYCKINCL 651
Query: 543 EEAVELYDDIHSRGSANSAIVGLIFQAMFSK------GEFDDAARFYEKYIKGS----DP 394
EA ++++D+ RG + + SK DA + E + S +
Sbjct: 652 REARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASVFWNEM 711
Query: 393 KFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNI 214
K + D Y +++ LC +E+ + NE+ + L PD Y+ALL GY ++
Sbjct: 712 KEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTALLCGYLAKGDL 771
Query: 213 PAALSIFEEMKEKG 172
A+++ +EM KG
Sbjct: 772 DRAIALVDEMSVKG 785
>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 809
Score = 175 bits (444), Expect = 4e-41
Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 2/424 (0%)
Frame = -3
Query: 1437 MNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEE 1261
+N LR +P A S F+Q+K+ + HD TYA ++ +LC +L+S L+ ++ +++
Sbjct: 66 LNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSR-KLDSILMEII--KKD 122
Query: 1260 GSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVK 1081
G+ F +++L + + G + L + ++L K V+ G+F+Q L K
Sbjct: 123 GNLD-FGIVNLFEAL-----GDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTK 176
Query: 1080 LVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKF 901
I S +FL+ RL+E K D ++ Y LK+ + PN TY I + G
Sbjct: 177 HCGF-APQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNL 235
Query: 900 DQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLL 721
+ +F +M G N+ + T+IE LCL G +LG+K+ + I DVF
Sbjct: 236 AEAIDVFRDMEE--SGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV-INAKIPMDVFA- 291
Query: 720 KRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIE 541
Y V+I+G C+ K +A +L + + D Y A++ +C GN+
Sbjct: 292 ----YTVVIRGFCSEMKLKEAESILREMEKQ------GFAPDVYVYCALISGYCMVGNLL 341
Query: 540 EAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGD 364
+A+ L+D++ S+G N I+ I Q + G + A ++++ K + D
Sbjct: 342 KALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMG------IFFDEA 395
Query: 363 FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEM 184
YN+VM++LC++G+VEEA ELL EMK K + PD+ +Y+ ++ GY + AL+I+ EM
Sbjct: 396 CYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREM 455
Query: 183 KEKG 172
K+ G
Sbjct: 456 KDIG 459
Score = 80.5 bits (197), Expect = 2e-12
Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 20/325 (6%)
Frame = -3
Query: 993 SYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIE 814
SY+ LK + + TYA + R+ G +++ + E+ +G N D + +
Sbjct: 78 SYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKK-DG---NLDFGIVNLF 133
Query: 813 ELCLQG----EFELGYKLYSRILIEC------DKDFDVFLLKRKYY---------KVLIK 691
E G F + ++ ++ C D+ FDV LL+ K+ L+
Sbjct: 134 EALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDV-LLQTKHCGFAPQILSCNFLMN 192
Query: 690 GLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIH 511
L + K D A + + +G+N ++ T Y ++ FC GN+ EA++++ D+
Sbjct: 193 RLVESRKVDMAIAIYRQ----LKAFGLNPNDYT--YTIAIKGFCRKGNLAEAIDVFRDME 246
Query: 510 SRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLC 334
G + NS + + G D + + I P +D Y +V+ C
Sbjct: 247 ESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIP------MDVFAYTVVIRGFC 300
Query: 333 QVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT 154
+++EA +L EM+ + APDV Y AL+ GYC + N+ AL++ +EM KG
Sbjct: 301 SEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCV 360
Query: 153 *FTLLIFRLSFPSRVLESTNCFKGF 79
+ ++ LS E N FK F
Sbjct: 361 ILSSILQGLSQMGMASEVANQFKEF 385
Score = 76.3 bits (186), Expect = 4e-11
Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 33/329 (10%)
Frame = -3
Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
DI +Y+ L +G +S ++++ + P+ T+ ++ GK D F
Sbjct: 463 DIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFF 522
Query: 879 D-------EMFSVFEGAW---TNTDTCLTYIEELCLQGEF---ELGYKLYSRILIECDKD 739
D E +S + + + + L QG +KL + E D +
Sbjct: 523 DNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSE 582
Query: 738 FDVFLLKRKY----------YKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTD 589
+ LL+ Y +I L AG+ + A V +N+ V D
Sbjct: 583 KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYV---FNMLVDR---GLAPDVI 636
Query: 588 CYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFD------DAAR 427
Y ++ +C ++EA + D+ +RG I + SK + DA +
Sbjct: 637 TYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMK 696
Query: 426 FYEKYIKGS----DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVR 259
E + S + K + D Y ++++ C+ +++A L NEM + LAPD
Sbjct: 697 SKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTV 756
Query: 258 HYSALLKGYCRINNIPAALSIFEEMKEKG 172
Y+ALL GYC + NI A+ +F+EM KG
Sbjct: 757 TYTALLSGYCNVGNIKKAVVLFDEMLNKG 785
Score = 69.7 bits (169), Expect = 3e-09
Identities = 88/434 (20%), Positives = 169/434 (38%), Gaps = 2/434 (0%)
Frame = -3
Query: 1431 CLRKDPKEAISLFSQV-KDYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEEEGS 1255
C KEA S+ ++ K F D+ Y +I C + + L L +E S
Sbjct: 300 CSEMKLKEAESILREMEKQGFAPDVYVYCALISGYC-------MVGNLLKALALHDEMVS 352
Query: 1254 PPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWVKLV 1075
V + ++ ++ L + V + FK + +G+F
Sbjct: 353 KGVKTNCVILSSILQGLS--------QMGMASEVANQFKEFKKMGIF------------- 391
Query: 1074 PLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQ 895
D + Y+ ++ L + GK + V +K K + P+ Y V + GK
Sbjct: 392 ----FDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVD 447
Query: 894 VNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKR 715
++ EM + + +TY L G F + + +
Sbjct: 448 ALNIYREMKDI-----GHKPDIVTYN---VLAGGFSRNGLTQEALSLLNYMETQGVKPDT 499
Query: 714 KYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEA 535
+ ++I+GLC GK DDA +++ + + Y A++ +C ++ +A
Sbjct: 500 VTHNMIIEGLCIGGKVDDAQ----------AFFDNLEEKCLENYSAMVNGYCEANHVNKA 549
Query: 534 VELYDDIHSRGSA-NSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFY 358
L + +G A + + S+G+ + A E + + +I Y
Sbjct: 550 FALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALN---INPTMI---MY 603
Query: 357 NIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKE 178
+ V+ +L Q G++E+A + N + + LAPDV Y+ ++ GYCR+N + A + +MK
Sbjct: 604 SKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKN 663
Query: 177 KGFSACQT*FTLLI 136
+G +T+L+
Sbjct: 664 RGIEPDVITYTVLL 677
>ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 801
Score = 174 bits (441), Expect = 9e-41
Identities = 131/440 (29%), Positives = 222/440 (50%), Gaps = 5/440 (1%)
Frame = -3
Query: 1476 PTAAPDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRL 1300
P ++ ++ ++ L +P A+S F+ ++ F H I TYA +I +L ++ +L
Sbjct: 43 PPSSFSTFDVLQTLHHLHNNPSHALSFFTHLRHTGFSHTISTYAAIIKILSFWNLQR-QL 101
Query: 1299 NSALVRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLG 1120
++ + L+ + P F LL+L +T+ + + S + L RA N K VSL
Sbjct: 102 DTLFLHLINRDHPPLP--FPLLNLFETLFQDFNTSH---KNNYFLLRAFNGFVKTCVSLN 156
Query: 1119 LFNQ-IKFALSWVK--LVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNA 949
+F++ I F + ++P D+ + +FL RL+EHG+ D ++ YE LK PN
Sbjct: 157 MFDKAIDFLFQTRRRGILP----DVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNC 212
Query: 948 ETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLY 769
TYAIV + + G Q +F+EM V G ++ YIE LC +LGY++
Sbjct: 213 YTYAIVIKALCKKGDLKQPLCVFEEMERV--GVIPHSYCFAAYIEGLCNNHRSDLGYEVL 270
Query: 768 SRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTD 589
+ + +V+ Y +++G C K D+A V D + GV D
Sbjct: 271 QAFR-KGNAPLEVYA-----YTAVVRGFCNEMKLDEAQGVFDD----MERQGVV--PDVY 318
Query: 588 CYYAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKY 412
Y +++ +C + N+ A+ L+D++ SRG N +V I + GE +++
Sbjct: 319 VYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCL---GEMGMTLEVVDQF 375
Query: 411 IKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGY 232
+ K + +DG YNIV ++LC +G+VE+A E++ EMK K L DV+HY+ L+ GY
Sbjct: 376 ---KELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGY 432
Query: 231 CRINNIPAALSIFEEMKEKG 172
C ++ A ++F+EMKEKG
Sbjct: 433 CLQGDLVTAFNMFKEMKEKG 452
Score = 79.7 bits (195), Expect = 3e-12
Identities = 73/342 (21%), Positives = 140/342 (40%), Gaps = 1/342 (0%)
Frame = -3
Query: 1158 AVNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYEL 979
A N +F A LG + +K L LD+ Y+ L+ G + + ++
Sbjct: 389 AYNIVFDALCMLGKVEDAVEMVEEMKSKRLG-LDVKHYTTLINGYCLQGDLVTAFNMFKE 447
Query: 978 LKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQ 799
+K K + P+ TY ++A S G + KL D M S +G N+ T
Sbjct: 448 MKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMES--QGMKPNSTT----------- 494
Query: 798 GEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSY 619
+K++I+GLC+ GK +A Y
Sbjct: 495 ------------------------------HKMIIEGLCSGGKVLEAE----------VY 514
Query: 618 YGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGS-ANSAIVGLIFQAMFSKGEF 442
+ D + + Y A++ +C T ++++ E++ + ++G A A + + G+
Sbjct: 515 FNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDI 574
Query: 441 DDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDV 262
+ A + ++ + +V Y+ ++ +LCQ G ++ A L + + PDV
Sbjct: 575 EKAVKLLDRML------LSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDV 628
Query: 261 RHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT*FTLLI 136
Y+ ++ YCR+N + A +F++MK +G FT+L+
Sbjct: 629 VTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLL 670
Score = 74.3 bits (181), Expect = 1e-10
Identities = 69/337 (20%), Positives = 132/337 (39%), Gaps = 39/337 (11%)
Frame = -3
Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
DI +Y+ L L +G V + ++S+ + PN+ T+ ++ GK + F
Sbjct: 456 DIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYF 515
Query: 879 D-------EMFSVFEGAWTNTD----------------------TCLTYIEELCLQGEFE 787
+ E++S + TD +C + +LC+ G+ E
Sbjct: 516 NSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIE 575
Query: 786 LGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVN 607
KL R+L+ +V K Y K+L LC AG +A + +
Sbjct: 576 KAVKLLDRMLLS-----NVEPSKIMYSKILA-ALCQAGDMKNARTLFD------VFVHRG 623
Query: 606 WDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIF----------QAMF 457
+ D Y ++ +C ++EA +L+ D+ RG I + +
Sbjct: 624 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFS 683
Query: 456 SKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKH 277
S G+ + + ++ D + + D Y ++M+ + ++A L ++M
Sbjct: 684 SHGKRKTTSLYVSTILR--DMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESG 741
Query: 276 LAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFS 166
L PD Y+AL+ G C ++ A+++ EM KG +
Sbjct: 742 LEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMT 778
>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 946
Score = 173 bits (439), Expect = 2e-40
Identities = 129/440 (29%), Positives = 223/440 (50%), Gaps = 8/440 (1%)
Frame = -3
Query: 1464 PDKVQLIGMMNCLRKDPKEAISLFSQVKDY--FRHDILTYAKVIGMLCDSSIDEDRLNSA 1291
P+ Q++ ++ R +P A+S FS++K+ F H+I TY +I +LC +++ RL+S
Sbjct: 61 PNTSQILQKLHLYRNNPSLALSHFSELKNQHGFSHNIQTYVAIIRILCYWNLNR-RLDSL 119
Query: 1290 LVRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFN 1111
++ S + +P +F + DL + + L+G V + + L RA KA V L +F+
Sbjct: 120 FRDIIISHSKQNP-LFEIHDLFEKL---LEGVNVKDK-NHYLLRAFVGFVKACVGLNMFD 174
Query: 1110 QIKFALSWVKLVPLNVL-DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAI 934
+ ++ +L +I + +FL+ RL++ + + ++ +KS + PN TYAI
Sbjct: 175 DAIDFMFMFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAI 234
Query: 933 VAR-VHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRIL 757
+ + + ++ G Q + +FDEM G N+ YIE LC + +LGY L R L
Sbjct: 235 IIKALGTKGGDLKQASGVFDEMKEA--GVTPNSYCYAAYIEGLCNNHQSDLGYDLL-RAL 291
Query: 756 IECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN---DTDC 586
E + DV+ Y +I+G C K D A V +Y + W D
Sbjct: 292 RENNAPIDVYA-----YTAVIRGFCNEMKLDKAMQV---------FYDMEWQRLVPDCHV 337
Query: 585 YYAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYI 409
Y +++ +C T ++ +A++LY+D+ +G N IV I GE +++
Sbjct: 338 YSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEV- 396
Query: 408 KGSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYC 229
K V +DG YNIV +SL ++G+++E A +L ++K H+ D++HY+ +KGYC
Sbjct: 397 -----KQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYC 451
Query: 228 RINNIPAALSIFEEMKEKGF 169
A IF+EM+EKGF
Sbjct: 452 LQGKPDKAYIIFKEMEEKGF 471
Score = 84.7 bits (208), Expect = 1e-13
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 3/306 (0%)
Frame = -3
Query: 1044 SFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFS 865
S +L E G++ VV ++ +K + + Y IV ++GK D+V + +++ S
Sbjct: 374 SCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKS 433
Query: 864 VFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGL 685
+ T T+I+ CLQG+ + Y ++ + +K F ++ Y VL GL
Sbjct: 434 MHIDFDIKHYT--TFIKGYCLQGKPDKAYIIFKEME---EKGFKPDVVA---YNVLAAGL 485
Query: 684 CAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSR 505
C +A D+L+ + GV ++ T + ++ FC+ G IEEA ++ +
Sbjct: 486 CGNRHVSEAMDLLN----YMDSQGVKPNSTT--HKIIIEGFCSEGKIEEAEGYFNSMKDE 539
Query: 504 G-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVL--IDGDFYNIVMESLC 334
+A+V +A + ++ F+E +G + S L + Y+ V+ LC
Sbjct: 540 SVEIYTAMVSGYCEADLIEKSYE---LFHELSNRGDTAQESSCLKQLSKVLYSKVLAELC 596
Query: 333 QVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKGFSACQT 154
Q G ++ A L + + PDV Y+ ++K YC +N + A +F++MK +G
Sbjct: 597 QKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVI 656
Query: 153 *FTLLI 136
+T+L+
Sbjct: 657 TYTVLL 662
Score = 78.6 bits (192), Expect = 7e-12
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 11/309 (3%)
Frame = -3
Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
D+ +Y+ L L + + + S+ + PN+ T+ I+ GK ++ F
Sbjct: 474 DVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYF 533
Query: 879 DEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKV 700
+ M E T Y E ++ +EL ++L +R + L K Y KV
Sbjct: 534 NSMKD--ESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKV 591
Query: 699 LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYD 520
L + LC G A L D+ + G + D Y +++ +C ++EA +L+
Sbjct: 592 LAE-LCQKGNMQRARS-LFDF-----FLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQ 644
Query: 519 DIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDF------- 361
D+ SRG I + SK + F ++ KG D + I D
Sbjct: 645 DMKSRGIKPDVITYTVLLDGKSK-QARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSP 703
Query: 360 ----YNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIF 193
Y ++++ +V E+A L NE+ + L PD Y+AL G N A++++
Sbjct: 704 DVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLY 763
Query: 192 EEMKEKGFS 166
EM KG +
Sbjct: 764 NEMSSKGMT 772
>ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568854934|ref|XP_006481071.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568854936|ref|XP_006481072.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X3 [Citrus sinensis]
gi|568854938|ref|XP_006481073.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X4 [Citrus sinensis]
gi|568854940|ref|XP_006481074.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X5 [Citrus sinensis]
Length = 831
Score = 172 bits (436), Expect = 4e-40
Identities = 130/429 (30%), Positives = 220/429 (51%), Gaps = 2/429 (0%)
Frame = -3
Query: 1452 QLIGMMNCLRKDPKEAISLFSQVK-DYFRHDILTYAKVIGMLCDSSIDEDRLNSALVRLL 1276
+++ + LRK+PK A+S F Q+K F H++ TYA ++ +LC + +L S L+ L+
Sbjct: 86 EVVEKLYSLRKEPKIALSFFEQLKRSGFSHNLCTYAAIVRILCCCGWQK-KLESMLLELV 144
Query: 1275 ASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFA 1096
+ + + F DLI+ + E S LTR +++ KAYVS+G+F++
Sbjct: 145 RKKTDAN---FEATDLIEALCGE---------GSTLLTRLSDAMIKAYVSVGMFDEGIDI 192
Query: 1095 LSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHS 916
L + V I S ++ + +L+E GK D ++ Y+ LK ++ N TY IV +
Sbjct: 193 LFQINRRGF-VWSICSCNYFMNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIKALC 251
Query: 915 EMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDF 736
+ G + ++F EM G N T IE LC+ G +LGY+L + E D
Sbjct: 252 KKGSMQEAVEVFLEMEKA--GVTPNAFAYSTCIEGLCMNGMLDLGYELLLK-WEEADIPL 308
Query: 735 DVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCN 556
F Y V+I+G C K + A VL L + GV D Y A++ +C
Sbjct: 309 SAFA-----YIVVIRGFCDQNKLEKAECVL----LHMEKQGVV--PDVYAYSALISGYCK 357
Query: 555 TGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSV 379
G I +A+ L+ ++ S+G N ++ +I + + G A+ +++++ D F
Sbjct: 358 FGKINKALPLHHEMTSKGIKTNCGVLSVILKGLCRNGM---ASAAIKQFLEFKDMGF--- 411
Query: 378 LIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALS 199
+D Y+I+++SLC++G+VE+A L EMK + + PDV +Y+ ++ GYC + AL
Sbjct: 412 FLDKVCYDIIVDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALD 471
Query: 198 IFEEMKEKG 172
+F+EMKE G
Sbjct: 472 LFKEMKEMG 480
Score = 73.6 bits (179), Expect = 2e-10
Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 15/323 (4%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD Y ++ L + G+ + + ++ +K + I P+ Y + + GK L
Sbjct: 413 LDKVCYDIIVDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDL 472
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKY-- 709
F EM + DT +TY L G F Y + K FD+ +++
Sbjct: 473 FKEMKEMGH----KPDT-ITYN---ILAGAFAQ----YGAV----QKAFDLLNYMKRHGL 516
Query: 708 ------YKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGN 547
+ ++I+GLC G+ ++A L G +N Y A++ +C TG+
Sbjct: 517 EPNFVTHNMIIEGLCMGGRVEEAEAFLDGLK------GKCLEN----YSAMINGYCKTGH 566
Query: 546 IEEAVELYDDIHSRG------SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK-GSDPKF 388
+EA +L+ + ++G S N + L+ + ++A + ++ I ++P
Sbjct: 567 TKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILR-----DNNNALKLFKTMITLNAEPS- 620
Query: 387 GSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPA 208
Y+ ++ +LCQ ++E+A + + + K L P + Y+ ++ GYC+IN +
Sbjct: 621 ------KSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLRE 674
Query: 207 ALSIFEEMKEKGFSACQT*FTLL 139
A +F +MK++G + +T+L
Sbjct: 675 ARDVFNDMKQRGITPDVVTYTVL 697
Score = 63.5 bits (153), Expect = 2e-07
Identities = 70/344 (20%), Positives = 138/344 (40%), Gaps = 13/344 (3%)
Frame = -3
Query: 1164 TRAVNSLFKAYVSLGLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYY 985
T N L A+ G + L+++K L + +++ +++ L G+ + ++
Sbjct: 485 TITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEP-NFVTHNMIIEGLCMGGRVEEAEAFL 543
Query: 984 ELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELC 805
+ LK K + E Y+ + + + G + +LF + + +G +C + L
Sbjct: 544 DGLKGKCL----ENYSAMINGYCKTGHTKEAFQLFMRLSN--QGVLVKKSSCNKLLTNLL 597
Query: 804 LQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDAS---DVLHDYN 634
+ + KL+ ++ + + Y LI LC A + + A DVL D
Sbjct: 598 ILRDNNNALKLFKTMITLNAEP------SKSMYDKLIGALCQAEEMEQAQLVFDVLVDKG 651
Query: 633 LAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFS 454
L Y ++ +C + EA ++++D+ RG + + S
Sbjct: 652 LTPHLI---------TYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHS 702
Query: 453 K------GEFDDAARFYEKYIKGS----DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAE 304
K DA + E + S + K + D Y +++ LC +E+
Sbjct: 703 KINLKGSSSSPDALQCKEDVVDASVFWNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGIT 762
Query: 303 LLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
+ NE+ + L PD Y+ALL GY ++ A+++ +EM KG
Sbjct: 763 VFNEISDRGLEPDTVTYTALLCGYLAKGDLDRAIALVDEMSVKG 806
>ref|XP_002880834.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297326673|gb|EFH57093.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 797
Score = 166 bits (419), Expect = 3e-38
Identities = 131/441 (29%), Positives = 215/441 (48%), Gaps = 2/441 (0%)
Frame = -3
Query: 1440 MMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALVRLLASEE 1264
++N R DP +A+S Q+K++ ++ YA ++ +L +D +L+S LV L+ +EE
Sbjct: 60 LLNSTRDDPNQALSFLRQLKEHDVSPNVNAYATLVRILTSWGLDR-KLDSVLVELIKNEE 118
Query: 1263 EGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQIKFALSWV 1084
G FS++DLI+ + E + S L R +L KAYV LG+F++ L
Sbjct: 119 RG----FSVMDLIEVIGEE---EAEEDQRSLVLIRVSGALVKAYVGLGMFDEAIDVLFQS 171
Query: 1083 KLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGK 904
K + V DI + +FL+ RLIE GK VV+ ++ LK + N TYAIV + G
Sbjct: 172 KRLDC-VPDIKACNFLMNRLIEFGKIGMVVALFKQLKQLGLCANEYTYAIVVKALCRKGD 230
Query: 903 FDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFL 724
+ L E SVF + T+I+ LC+ GE E L ++ D + V
Sbjct: 231 LEGAAMLLLESPSVF--------SYKTFIDGLCVNGETEKAVVLIEEMI---DTNVLVGD 279
Query: 723 LKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNI 544
R + ++++G C K + A V+ + + + D A++ ++C N+
Sbjct: 280 DLRTVFCMVVRGFCNEMKMEAAESVILEMEK------IGFGPDVSACSAIIDRYCKNMNL 333
Query: 543 EEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDG 367
EA+ D + +G N IV I Q + D EK+ + D ++ +D
Sbjct: 334 PEALGFLDKMLGKGLKINCVIVSSILQCYC---KMDMCLEALEKFKEFRDM---NIFLDR 387
Query: 366 DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
YN+ ++L ++G+VEEA ELL EMK K + PDV +Y+ L+ GYC + AL + +E
Sbjct: 388 VCYNVAFDALSKLGRVEEAIELLQEMKDKGIVPDVINYTTLIDGYCLKGKVVDALDLIDE 447
Query: 186 MKEKGFSACQT*FTLLIFRLS 124
M G S + +L+ L+
Sbjct: 448 MIGNGTSPDLITYNVLVSGLA 468
Score = 66.6 bits (161), Expect = 3e-08
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 28/323 (8%)
Frame = -3
Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLF 880
D+ +Y+ L+ L +G E++V+ YE +K++ + PNA T ++ E F + K
Sbjct: 456 DLITYNVLVSGLARNGHEEAVLEIYERMKAEGLKPNAVTDNVII----EGLCFARKVKEA 511
Query: 879 DEMFSVFEGAWTNTDTCLT--YIEELCLQGEFELGY------------KLYSRILIECDK 742
++ F E L Y E + F+L KL+ + IE
Sbjct: 512 EDFFMSLEQKCPENKASLVKGYCESGLSKKAFKLFVTLEYPLRKSVYIKLFFSLCIEGCL 571
Query: 741 DFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN----DTDCYYAV 574
D +LKR + + G GK A L++ A + + D Y +
Sbjct: 572 DKAHTVLKRMWAYRVEPGRSMCGKMIGALCRLNNAIDAQQLFDTMVERGLIPDLFTYTIM 631
Query: 573 LRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDP 394
+ +C +++A L++D+ RG + + + K D ++G
Sbjct: 632 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL---DPEHHETGSVQGEVG 688
Query: 393 KFGSVLI----------DGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSAL 244
K S L+ D Y ++++ C++ ++E+AAEL + M L PD+ Y+AL
Sbjct: 689 KRNSELLREFSASGIGLDVVSYTVLIDRQCKMDKLEQAAELFDRMIDSGLEPDIVAYTAL 748
Query: 243 LKGYCRINNIPAALSIFEEMKEK 175
+ Y R I A+++ E+ +K
Sbjct: 749 ISSYFRKGYIDKAVTLVTELSKK 771
>ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [Amborella trichopoda]
gi|548859411|gb|ERN17091.1| hypothetical protein
AMTR_s00044p00087550 [Amborella trichopoda]
Length = 872
Score = 165 bits (418), Expect = 4e-38
Identities = 120/434 (27%), Positives = 214/434 (49%), Gaps = 4/434 (0%)
Frame = -3
Query: 1461 DKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDRLNSALV 1285
D +I ++N L ++P A+S F+QVK F H++ TY+ +I +LC S + +L L
Sbjct: 120 DNSNVIKVLNNLIREPLLALSFFNQVKGLGFSHNVHTYSTIIQILCSSGLHH-KLRKLLE 178
Query: 1284 RLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSLGLFNQI 1105
L+ + F + L ++ + +G + + L KAY G+F++
Sbjct: 179 ELVFETQN-----FEIWRLFYSLPKDCNGREAISF------KVFDGLIKAYADRGMFDE- 226
Query: 1104 KFALSWVKLVPLN--VLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIV 931
A+ V N + + S +FL+ LI++ K+D+ + + LK PN T+ I+
Sbjct: 227 --AVGLVLQAGNNGCLPHVWSCNFLINYLIDNKKQDTAEALFHQLKKLGFNPNVYTFTII 284
Query: 930 ARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIE 751
+ + GK + EM + G + T T I+ +C GE ++GYKL I
Sbjct: 285 VKSLCKGGKLQDALDMLTEMEEM--GIAPDAFTFTTLIDGICFNGESKMGYKLLKTIRSR 342
Query: 750 CDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVL 571
LL Y ++I+G C K D+A VL D + G+ D Y +++
Sbjct: 343 G------VLLYTFSYNIVIRGFCGEMKLDEAELVLSD----MEEQGIA--PDMYSYKSLI 390
Query: 570 RKFCNTGNIEEAVELYDDIHSRGSANSAIV-GLIFQAMFSKGEFDDAARFYEKYIKGSDP 394
+CN GN+ +A+ L++D+ S+G + I+ G + Q++ G +A +E++
Sbjct: 391 TGYCNVGNLVKALSLHEDMISKGVKTTCIILGYLIQSLRKNGLAIEAIELFERF------ 444
Query: 393 KFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNI 214
+ + +D Y +V+++ C+ G E A +L++EMK + LAPD HY++L+ GYCR ++
Sbjct: 445 RNSGLFLDEVLYGMVIDAYCKQGNTEVALQLMDEMKGRRLAPDSLHYTSLIDGYCRNGDL 504
Query: 213 PAALSIFEEMKEKG 172
A +F++M E G
Sbjct: 505 GHAYKVFKDMVETG 518
Score = 87.4 bits (215), Expect = 2e-14
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 2/299 (0%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD Y ++ + G + + + +K + + P++ Y + + G K+
Sbjct: 451 LDEVLYGMVIDAYCKQGNTEVALQLMDEMKGRRLAPDSLHYTSLIDGYCRNGDLGHAYKV 510
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
F +M V G NT T C +G + + L +EC D + + R Y
Sbjct: 511 FKDM--VETGLEPNTVTYNILANGFCRKGLVQETFDL-----LECMLDQGL-VPNRVTYS 562
Query: 702 VLIKGLCAAGKFDDASDVLHDY-NLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVEL 526
+I GLC GK DA + + + V + A++ +C + +EA EL
Sbjct: 563 TVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFS-------AMISGYCEQRHTKEAYEL 615
Query: 525 YDD-IHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGDFYNIV 349
+ + R +S + + + D A +E + V+ D Y+ +
Sbjct: 616 FKRLVKKRVLPSSTACSRLISNLCKDEDLDKALMVHEMMVADG------VIPDEITYSTL 669
Query: 348 MESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKEKG 172
+ + Q+G + +A +L + V+ L+PDV Y+AL+ GYCR+N++ A +F +MK+KG
Sbjct: 670 ISAFAQLGNMTKARDLYENLMVRGLSPDVITYTALINGYCRVNHLQEACKLFNDMKQKG 728
Score = 73.6 bits (179), Expect = 2e-10
Identities = 72/335 (21%), Positives = 138/335 (41%), Gaps = 29/335 (8%)
Frame = -3
Query: 996 VSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYI 817
+S++ +K + N TY+ + ++ G ++ KL +E+ VFE
Sbjct: 139 LSFFNQVKGLGFSHNVHTYSTIIQILCSSGLHHKLRKLLEEL--VFETQ----------- 185
Query: 816 EELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVL--- 646
FE+ ++L+ + +C+ + K + LIK G FD+A ++
Sbjct: 186 -------NFEI-WRLFYSLPKDCNGREAISF---KVFDGLIKAYADRGMFDEAVGLVLQA 234
Query: 645 ---------HDYNLAVSYYGVNWDNDTD-----------------CYYAVLRKFCNTGNI 544
N ++Y N DT + +++ C G +
Sbjct: 235 GNNGCLPHVWSCNFLINYLIDNKKQDTAEALFHQLKKLGFNPNVYTFTIIVKSLCKGGKL 294
Query: 543 EEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGSDPKFGSVLIDGD 364
++A+++ ++ G A A F + F+ ++ K +K + VL+
Sbjct: 295 QDALDMLTEMEEMGIAPDAFT---FTTLIDGICFNGESKMGYKLLKTIRSR--GVLLYTF 349
Query: 363 FYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEM 184
YNIV+ C +++EA +L++M+ + +APD+ Y +L+ GYC + N+ ALS+ E+M
Sbjct: 350 SYNIVIRGFCGEMKLDEAELVLSDMEEQGIAPDMYSYKSLITGYCNVGNLVKALSLHEDM 409
Query: 183 KEKGFSACQT*FTLLIFRLSFPSRVLESTNCFKGF 79
KG LI L +E+ F+ F
Sbjct: 410 ISKGVKTTCIILGYLIQSLRKNGLAIEAIELFERF 444
Score = 72.8 bits (177), Expect = 4e-10
Identities = 80/314 (25%), Positives = 128/314 (40%), Gaps = 9/314 (2%)
Frame = -3
Query: 1050 SYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKLFDEM 871
+Y+ L G E + + + PN TY+ V + GK F +
Sbjct: 525 TYNILANGFCRKGLVQETFDLLECMLDQGLVPNRVTYSTVIYGLCKGGKLKDAESFFKTL 584
Query: 870 FSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYKVLIK 691
V +G + T I C Q + Y+L+ R++ + L LI
Sbjct: 585 --VDKGLGHCSVTFSAMISGYCEQRHTKEAYELFKRLVKKR------VLPSSTACSRLIS 636
Query: 690 GLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIEEAVELYDDIH 511
LC D A ++H+ +A GV D T Y ++ F GN+ +A +LY+++
Sbjct: 637 NLCKDEDLDKAL-MVHEMMVAD---GVIPDEIT--YSTLISAFAQLGNMTKARDLYENLM 690
Query: 510 SRGSANSAIV-GLIFQAMFSKGEFDDAAR-FYEKYIKGSDPKF--GSVLIDGDFYNIVME 343
RG + I + +A + F + KG P + L DG F I+ E
Sbjct: 691 VRGLSPDVITYTALINGYCRVNHLQEACKLFNDMKQKGPRPDVITFTALFDGYFKEILQE 750
Query: 342 SLCQVGQ-----VEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEEMKE 178
L G+ E +LL EMK L PD+ Y+ L+ G+C+IN + A +F+EM
Sbjct: 751 DLRYRGKRRVQVATEIFKLLEEMKEMGLKPDLICYTVLIDGHCKINRLHDAFQLFQEMLG 810
Query: 177 KGFSACQT*FTLLI 136
+G + +T LI
Sbjct: 811 RGITPDIVAYTTLI 824
Score = 72.4 bits (176), Expect = 5e-10
Identities = 70/328 (21%), Positives = 138/328 (42%), Gaps = 14/328 (4%)
Frame = -3
Query: 1080 LVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKF 901
LVP V +YS ++ L + GK S+++ L K + + T++ + + E
Sbjct: 554 LVPNRV----TYSTVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFSAMISGYCEQRHT 609
Query: 900 DQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLL 721
+ +LF + V + ++ C I LC + + ++ ++ D +
Sbjct: 610 KEAYELFKRL--VKKRVLPSSTACSRLISNLCKDEDLDKALMVHEMMVA------DGVIP 661
Query: 720 KRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCYYAVLRKFCNTGNIE 541
Y LI G A D+ NL V D Y A++ +C +++
Sbjct: 662 DEITYSTLISAFAQLGNMTKARDLYE--NLMVR----GLSPDVITYTALINGYCRVNHLQ 715
Query: 540 EAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKYIKGS------------- 400
EA +L++D+ +G I F A+F G F + + +Y +G
Sbjct: 716 EACKLFNDMKQKGPRPDVIT---FTALFD-GYFKEILQEDLRY-RGKRRVQVATEIFKLL 770
Query: 399 -DPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRI 223
+ K + D Y ++++ C++ ++ +A +L EM + + PD+ Y+ L+ GYC
Sbjct: 771 EEMKEMGLKPDLICYTVLIDGHCKINRLHDAFQLFQEMLGRGITPDIVAYTTLISGYCNR 830
Query: 222 NNIPAALSIFEEMKEKGFSACQT*FTLL 139
N+ A ++ EEM +G + +++L
Sbjct: 831 GNVKKAANLVEEMLFRGLKPDKLTYSVL 858
>ref|XP_006293706.1| hypothetical protein CARUB_v10022664mg [Capsella rubella]
gi|482562414|gb|EOA26604.1| hypothetical protein
CARUB_v10022664mg [Capsella rubella]
Length = 794
Score = 164 bits (415), Expect = 1e-37
Identities = 132/454 (29%), Positives = 217/454 (47%), Gaps = 2/454 (0%)
Frame = -3
Query: 1479 PPTAAPDKVQLIGMMNCLRKDPKEAISLFSQVKDY-FRHDILTYAKVIGMLCDSSIDEDR 1303
P + ++ L+ +N R DP A+S Q+K + ++ YA ++ +L +D +
Sbjct: 47 PNLSKLNQSSLLRFLNSTRDDPSLALSFLEQLKQHGVSPNVNAYATLVRILSAWGLDR-K 105
Query: 1302 LNSALVRLLASEEEGSPPVFSLLDLIQTVAIELDGSRVPESPSPALTRAVNSLFKAYVSL 1123
L+S LV L+ +EE G F ++DLI+ + E D + R ++L KAYVSL
Sbjct: 106 LDSVLVELIKNEERG----FCVMDLIEVIGEEAD--------DVVMVRGSSALVKAYVSL 153
Query: 1122 GLFNQIKFALSWVKLVPLNVLDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAET 943
G+F++ L +K + V I S +FL+ RLIE GK D VV+ ++ K + N T
Sbjct: 154 GMFDEAIDVLFQIKRLDC-VPSIKSCNFLMNRLIEFGKIDMVVALFKQRKQLGLCANEYT 212
Query: 942 YAIVARVHSEMGKFDQVNKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSR 763
YAIV + G KL + SVF T+IE LC GE E
Sbjct: 213 YAIVVKALCRKGDLQGAAKLLVDSPSVF--------VYKTFIEGLCANGETETAVDWIGE 264
Query: 762 ILIECDKDFDVFLLKRKYYKVLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDNDTDCY 583
++ +F V R Y ++++G C K + A V+ + + + +G+ D
Sbjct: 265 MI---GMNFMVGDDLRTAYSMVVRGFCNEMKMEAAESVVLE--MEKNGFGL----DVYAC 315
Query: 582 YAVLRKFCNTGNIEEAVELYDDIHSRG-SANSAIVGLIFQAMFSKGEFDDAARFYEKYIK 406
AV+ ++C N+ E + D + +G N IV + Q + D EK+ +
Sbjct: 316 SAVIDRYCKNLNLPEVLRFLDKMLGKGLRINCGIVSSVLQCYC---QMDMCLEALEKFKE 372
Query: 405 GSDPKFGSVLIDGDFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCR 226
SD ++ +D YN+ ++L ++G+VEEA EL EM K + PDV +Y+ L+ GYC
Sbjct: 373 FSDM---NIFLDRVCYNVAFDALGKLGRVEEAVELFREMMDKGMVPDVINYTTLINGYCL 429
Query: 225 INNIPAALSIFEEMKEKGFSACQT*FTLLIFRLS 124
+ AL + +EM+ G S + +L+ L+
Sbjct: 430 EGKVVDALDLIDEMRGNGISPDLITYNVLVSGLA 463
Score = 70.9 bits (172), Expect = 1e-09
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 35/332 (10%)
Frame = -3
Query: 1059 DISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIV------ARVHSEMGKFD 898
D+ +Y+ L+ L +G E+ + Y+ +K++ + P+A T+ ++ AR E F
Sbjct: 451 DLITYNVLVSGLARNGHEEEALEIYDRMKAEGLKPDAVTHNVIIEGLCFARKVKEAEDFW 510
Query: 897 QV--NKLFDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIEC-------- 748
+ +K + S+ +G C + + + + EL Y L + I+
Sbjct: 511 KSLDDKCHENDASLVKGY------CESGLSKKAYKRFIELEYPLRKSVYIKLFFSLITEG 564
Query: 747 --DKDFDVFLLKRKYYKV---------LIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWD 601
DK DV L K Y+V +I LC + +A +L D +
Sbjct: 565 YHDKALDV-LKKMWAYRVEPGRSMCGKMIGALCRSNNAREAQ-LLFDTMIERGLIP---- 618
Query: 600 NDTDCYYAVLRKFCNTGNIEEAVELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFY 421
D Y ++ +C +++A +L++D+ RG + + + K + + Y
Sbjct: 619 -DLFTYTIMIHTYCRRSELQKADDLFEDMKQRGIKPDVVTYTVLLDRYLKLDAEHHETGY 677
Query: 420 ----EKYIKGSDP--KFGSVLIDGDF--YNIVMESLCQVGQVEEAAELLNEMKVKHLAPD 265
++ K S+ KF + I+ D Y ++++ C++ +E A +L + M L PD
Sbjct: 678 VQEEKQRSKASEVLRKFTAAGIELDVVCYTVLIDRQCKIDNLENAEKLFDRMIDSGLEPD 737
Query: 264 VRHYSALLKGYCRINNIPAALSIFEEMKEKGF 169
+ Y+ LL GYCR I A+++ E+ EK F
Sbjct: 738 MVAYTTLLSGYCRKGYIDKAVTLVTELSEKDF 769
Score = 62.4 bits (150), Expect = 5e-07
Identities = 68/319 (21%), Positives = 130/319 (40%), Gaps = 8/319 (2%)
Frame = -3
Query: 1062 LDISSYSFLLKRLIEHGKEDSVVSYYELLKSKSITPNAETYAIVARVHSEMGKFDQVNKL 883
LD Y+ L + G+ + V + + K + P+ Y + + GK L
Sbjct: 380 LDRVCYNVAFDALGKLGRVEEAVELFREMMDKGMVPDVINYTTLINGYCLEGKVVDALDL 439
Query: 882 FDEMFSVFEGAWTNTDTCLTYIEELCLQGEFELGYKLYSRILIECDKDFDVFLLKRKYYK 703
DEM G + T + L G E ++Y R+ E K V +
Sbjct: 440 IDEMRG--NGISPDLITYNVLVSGLARNGHEEEALEIYDRMKAEGLKPDAVT------HN 491
Query: 702 VLIKGLCAAGKFDDASDVLHDYNLAVSYYGVNWDN-DTDCYY---AVLRKFCNTGNIEEA 535
V+I+GLC A K +A D W + D C+ ++++ +C +G ++A
Sbjct: 492 VIIEGLCFARKVKEAEDF--------------WKSLDDKCHENDASLVKGYCESGLSKKA 537
Query: 534 VELYDDIHSRGSANSAIVGLIFQAMFSKGEFDDAARFYEKY----IKGSDPKFGSVLIDG 367
+ + ++ ++ +F ++ ++G D A +K ++ G ++
Sbjct: 538 YKRFIELEY--PLRKSVYIKLFFSLITEGYHDKALDVLKKMWAYRVEPGRSMCGKMI--- 592
Query: 366 DFYNIVMESLCQVGQVEEAAELLNEMKVKHLAPDVRHYSALLKGYCRINNIPAALSIFEE 187
+LC+ EA L + M + L PD+ Y+ ++ YCR + + A +FE+
Sbjct: 593 -------GALCRSNNAREAQLLFDTMIERGLIPDLFTYTIMIHTYCRRSELQKADDLFED 645
Query: 186 MKEKGFSACQT*FTLLIFR 130
MK++G +T+L+ R
Sbjct: 646 MKQRGIKPDVVTYTVLLDR 664