BLASTX nr result

ID: Paeonia24_contig00006190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00006190
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301051.1| hypothetical protein POPTR_0002s09670g [Popu...    47   1e-08
ref|XP_007018781.1| Retrotransposon-derived protein PEG10, putat...    40   8e-07
ref|XP_007226621.1| hypothetical protein PRUPE_ppa022895mg [Prun...    43   4e-06

>ref|XP_002301051.1| hypothetical protein POPTR_0002s09670g [Populus trichocarpa]
           gi|222842777|gb|EEE80324.1| hypothetical protein
           POPTR_0002s09670g [Populus trichocarpa]
          Length = 105

 Score = 47.4 bits (111), Expect(2) = 1e-08
 Identities = 20/28 (71%), Positives = 27/28 (96%)
 Frame = -2

Query: 107 VGDLKIELVRERMKSKRIEICGLVEVML 24
           +GDLK+EL RER+KSKRI++CGL+EV+L
Sbjct: 58  IGDLKMELARERLKSKRIKLCGLMEVIL 85



 Score = 37.4 bits (85), Expect(2) = 1e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = -1

Query: 273 MEGVES-ERNDEVLKSQVAIRCAKATLFI*SLKS 175
           MEG E  E  D+ LKSQVA+RCAKA + +  LKS
Sbjct: 1   MEGAEKMESKDKPLKSQVAVRCAKAAILLSLLKS 34


>ref|XP_007018781.1| Retrotransposon-derived protein PEG10, putative [Theobroma cacao]
           gi|508724109|gb|EOY16006.1| Retrotransposon-derived
           protein PEG10, putative [Theobroma cacao]
          Length = 113

 Score = 39.7 bits (91), Expect(2) = 8e-07
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = -1

Query: 273 MEGVESERNDEVLKSQVAIRCAKATLFI*SLKSVGSHTSRSA 148
           MEG+E++  DE  K  +AIRCAKA L + SLKS  S    +A
Sbjct: 1   MEGIEAKTRDEAPKLLMAIRCAKAALLLSSLKSSVSRVFEAA 42



 Score = 38.9 bits (89), Expect(2) = 8e-07
 Identities = 16/43 (37%), Positives = 30/43 (69%)
 Frame = -2

Query: 146 NSMKARKGDVDESVGDLKIELVRERMKSKRIEICGLVEVMLTL 18
           N     K  +   + +L++ELV+ER+K K+I++CG++E++L L
Sbjct: 44  NDEDEEKEKMRREIENLRVELVKERLKIKKIKLCGVMELILQL 86


>ref|XP_007226621.1| hypothetical protein PRUPE_ppa022895mg [Prunus persica]
           gi|462423557|gb|EMJ27820.1| hypothetical protein
           PRUPE_ppa022895mg [Prunus persica]
          Length = 110

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 17/30 (56%), Positives = 27/30 (90%)
 Frame = -2

Query: 107 VGDLKIELVRERMKSKRIEICGLVEVMLTL 18
           +GDLK+E+ RER+ +KRI++CGL+E++L L
Sbjct: 61  IGDLKMEVARERLLNKRIKLCGLLELLLQL 90



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = -1

Query: 273 MEGVESE---RNDEVLKSQVAIRCAKATLFI*SLKS 175
           MEG E++      E L+S  AIRCAKA L + SLKS
Sbjct: 1   MEGRETQTKGEGGEALRSHAAIRCAKAALLLSSLKS 36


Top