BLASTX nr result
ID: Paeonia24_contig00006109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00006109
(1042 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus... 274 4e-71
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu... 272 2e-70
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 267 5e-69
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 267 5e-69
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei... 263 7e-68
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 262 2e-67
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 261 3e-67
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 261 3e-67
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 261 4e-67
gb|ADL36848.1| WHY domain class transcription factor [Malus dome... 254 4e-65
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 252 2e-64
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 252 2e-64
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 252 2e-64
ref|XP_007019693.1| Whirly 2, putative isoform 1 [Theobroma caca... 251 3e-64
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 251 3e-64
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 251 3e-64
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258... 251 3e-64
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi... 249 1e-63
gb|AFK37234.1| unknown [Lotus japonicus] 249 2e-63
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ... 248 4e-63
>gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus guttatus]
Length = 236
Score = 274 bits (701), Expect = 4e-71
Identities = 133/208 (63%), Positives = 166/208 (79%), Gaps = 7/208 (3%)
Frame = +1
Query: 157 LHAHTFPAGISTYVANGQTPVKTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGN 336
L T +GIST G++ K FAPYSI+KGKAA S +PLLP FTKL SGG K++R G+
Sbjct: 33 LRGLTTQSGIST----GKSAAKVFAPYSIYKGKAALSADPLLPMFTKLQSGGYKVERRGS 88
Query: 337 MMLTFWPAIGERKYDWEKKQRFALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKS 516
+MLTFWPAIGERKYDW+K+Q+FALS TE G+LI+LG DSCEFFHDP++ +SNAGQVRKS
Sbjct: 89 IMLTFWPAIGERKYDWDKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKS 148
Query: 517 LSIKPHADGSGYFISLNVVNSIQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTN 696
LSIK HADGSGYF+SL+VVN+I KTN+RF+VPVT+AEFAV+RT+F+FALP ++GWD+YTN
Sbjct: 149 LSIKAHADGSGYFVSLSVVNNILKTNDRFVVPVTTAEFAVMRTAFTFALPHLIGWDQYTN 208
Query: 697 QKPAASMENQS-------PMRRNSEWDR 759
Q P + ++ P +SEWDR
Sbjct: 209 QVPHCASKSSPTAAAAALPQLPSSEWDR 236
>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
gi|118484514|gb|ABK94132.1| unknown [Populus
trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
protein POPTR_0003s04700g [Populus trichocarpa]
Length = 229
Score = 272 bits (695), Expect = 2e-70
Identities = 136/217 (62%), Positives = 168/217 (77%), Gaps = 5/217 (2%)
Frame = +1
Query: 124 GKAGQVKDSLSLHAHTFPAGISTYVANGQTPV--KTFAPYSIFKGKAAFSVEPLLPTFTK 297
GK V+D +LHA TF A IST G++ + + FAPYS+FKGKAA SVEP+LPTF+K
Sbjct: 16 GKPTDVRDGSALHALTFQASIST---GGKSSIQDRVFAPYSVFKGKAALSVEPVLPTFSK 72
Query: 298 LSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALINLGPTDSCEFFHDP 477
SG +++DR G+MMLTF PAIGERKYD+EK+Q+FALS TE G+LI+ GP DSCEFFHDP
Sbjct: 73 FGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCEFFHDP 132
Query: 478 AIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVTSAEFAVLRTSFSF 657
++ +SNAGQVRK+LSIKPHADGSGYF+SL+VVN+I KT ERF VPVT+AEF VL+T+ SF
Sbjct: 133 SMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTACSF 192
Query: 658 ALPRIMGWDRYTNQKP---AASMENQSPMRRNSEWDR 759
ALP IMGWDR T P A+ + P + EWD+
Sbjct: 193 ALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLEWDK 229
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 267 bits (683), Expect = 5e-69
Identities = 138/230 (60%), Positives = 173/230 (75%), Gaps = 7/230 (3%)
Frame = +1
Query: 91 IRRHLCGKLLAGKAGQVKDSLSLHAHTFPAGISTY----VANGQTPVKTFAPYSIFKGKA 258
IR L K L+G+ VK S+ +A A ST VA+G+ + FAPYS+FKGKA
Sbjct: 8 IRNQLLHKKLSGE--DVKGSIWQNAINTFAAFSTVRQDVVADGKREGRVFAPYSVFKGKA 65
Query: 259 AFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALIN 438
A S EP LPTF +L SGG+KL+R G +MLTFWP++GERKYDWEK+Q FALS TE G+LI+
Sbjct: 66 ALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLIS 125
Query: 439 LGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVT 618
+G DS EFFHDP++ +SNAGQVRKSLSIKP+ADGSGYF+SL+VVN+ KTN+RF VPVT
Sbjct: 126 MGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVT 185
Query: 619 SAEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQS---PMRRNSEWDR 759
+AEFAV+RT+FSFALP IMGWDR+TN+ + ++ S P +EWDR
Sbjct: 186 TAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 235
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 267 bits (683), Expect = 5e-69
Identities = 139/230 (60%), Positives = 170/230 (73%), Gaps = 8/230 (3%)
Frame = +1
Query: 94 RRHLCGKLLAGKAGQVKDSLSLHAHTFPAGISTYVAN-----GQTPVKTFAPYSIFKGKA 258
R L K L G+ VK S+ HA AG ST N G+ + FAPYS+FKGKA
Sbjct: 11 RNQLLHKKLPGEC--VKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKA 68
Query: 259 AFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALIN 438
A S EP LPTF +L SGG+KL+R G +MLTFWP++GERKYDWEK+Q FALS TE G+LI+
Sbjct: 69 ALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLIS 128
Query: 439 LGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVT 618
+G DS EFFHDP++ +SNAGQVRKSLSIKP+ADGSGYFISL+VVN+ KTN+RF VPVT
Sbjct: 129 MGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVT 188
Query: 619 SAEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQS---PMRRNSEWDR 759
+AEFAV+RT+FSFALP IMGWDR+TN+ + ++ S P +EWDR
Sbjct: 189 TAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238
>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 240
Score = 263 bits (673), Expect = 7e-68
Identities = 137/231 (59%), Positives = 169/231 (73%), Gaps = 9/231 (3%)
Frame = +1
Query: 94 RRHLCGKLLAGKAGQVKDSLSLHAHTFPAGIST----YVANGQTPVKTFAPYSIFKGKAA 261
R L KLLAG+A V+D L H AG+ST A G + FAPY ++KGKAA
Sbjct: 12 RSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIFAPYYVYKGKAA 71
Query: 262 FSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALINL 441
FSV+P+LPTF KL SG +K+ R G ++LTF PAIGERKYDW KKQ FALSPTE G+L+ +
Sbjct: 72 FSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFALSPTEVGSLLTM 131
Query: 442 GPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVTS 621
GP DS EFFHDPA+ +SNAGQ+RKSLSIK +AD G+FISLNV N+I KTNERF+VPVT+
Sbjct: 132 GPRDSSEFFHDPAMLSSNAGQMRKSLSIKANAD--GFFISLNVANNILKTNERFVVPVTT 189
Query: 622 AEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQSPMR-----RNSEWDR 759
AEFAV++T+ SFALP +MGWDR TNQ P +S ++ S + N EWD+
Sbjct: 190 AEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSSSSKVDQQFLNLEWDK 240
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 262 bits (669), Expect = 2e-67
Identities = 133/236 (56%), Positives = 169/236 (71%), Gaps = 7/236 (2%)
Frame = +1
Query: 73 KATTTMIRRHLC--GKLLAGKAGQVKDSLSLHAHTFPAGISTYVANGQTPVKTFAPYSIF 246
K T++ R LC K L A ++ S + +G +G + FAPY+IF
Sbjct: 3 KQARTLLSRSLCDQSKSLFDGASTLRGFASWSTGSGFSGKEAAKPSG----RVFAPYAIF 58
Query: 247 KGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAG 426
KGKAA SVEP+LPTFT++ SG ++LDR G++M+TF PA GERKYDWEKKQ+FALSPTE G
Sbjct: 59 KGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVG 118
Query: 427 ALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFI 606
+LI++G DS EFFHDP++K+SNAGQVRKSLSIKPHADGSGYFISL V+NSI KTN+R +
Sbjct: 119 SLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIV 178
Query: 607 VPVTSAEFAVLRTSFSFALPRIMGWDRYTNQ-----KPAASMENQSPMRRNSEWDR 759
VPVT+AEF V++T+FSF LP +MGWDR T+Q + S N P + EWD+
Sbjct: 179 VPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTGTQRTTSHGNTDPQQLEQEWDK 234
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 261 bits (668), Expect = 3e-67
Identities = 133/236 (56%), Positives = 168/236 (71%), Gaps = 7/236 (2%)
Frame = +1
Query: 73 KATTTMIRRHLC--GKLLAGKAGQVKDSLSLHAHTFPAGISTYVANGQTPVKTFAPYSIF 246
K T++ R LC K L A ++ S + G S + + FAPY+IF
Sbjct: 3 KQARTLLSRSLCDQSKSLFDGASTLRGFASWSTGS---GFSGKEEAAKPSGRVFAPYAIF 59
Query: 247 KGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAG 426
KGKAA SVEP+LPTFT++ SG ++LDR G++M+TF PA GERKYDWEKKQ+FALSPTE G
Sbjct: 60 KGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVG 119
Query: 427 ALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFI 606
+LI++G DS EFFHDP++K+SNAGQVRKSLSIKPHADGSGYFISL V+NSI KTN+R +
Sbjct: 120 SLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIV 179
Query: 607 VPVTSAEFAVLRTSFSFALPRIMGWDRYTNQ-----KPAASMENQSPMRRNSEWDR 759
VPVT+AEF V++T+FSF LP +MGWDR T+Q + S N P + EWD+
Sbjct: 180 VPVTTAEFTVMKTAFSFVLPHLMGWDRLTDQDGTGTQRTTSHGNTDPQQLEQEWDK 235
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 261 bits (667), Expect = 3e-67
Identities = 137/230 (59%), Positives = 172/230 (74%), Gaps = 8/230 (3%)
Frame = +1
Query: 94 RRHLCGKLLAGKAGQVKDSLSLHAHTFPAGISTY----VAN-GQTPVKTFAPYSIFKGKA 258
R L K L+G+ VK S+ +A A ST VA+ G+ + FAPYS+FKGKA
Sbjct: 11 RNQLLHKKLSGE--DVKGSIWQNAINTFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKA 68
Query: 259 AFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALIN 438
A S EP LPTF +L SGG+KL+R G +MLTFWP++GERKYDWEK+Q FALS TE G+LI+
Sbjct: 69 ALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLIS 128
Query: 439 LGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVT 618
+G DS EFFHDP++ +SNAGQVRKSLSIKP+ADGSGYF+SL+VVN+ KTN+RF VPVT
Sbjct: 129 MGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVT 188
Query: 619 SAEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQS---PMRRNSEWDR 759
+AEFAV+RT+FSFALP IMGWDR+TN+ + ++ S P +EWDR
Sbjct: 189 TAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 261 bits (666), Expect = 4e-67
Identities = 136/230 (59%), Positives = 167/230 (72%), Gaps = 8/230 (3%)
Frame = +1
Query: 94 RRHLCGKLLAGKAGQVKDSLSLHAHTFPAGISTYVAN-----GQTPVKTFAPYSIFKGKA 258
R L K L G+ VK S+ HA AG ST N G+ + FAPYS+FKGKA
Sbjct: 11 RNQLLHKKLPGEC--VKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKA 68
Query: 259 AFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALIN 438
A S EP LPTF +L SGG+KL+R G +MLTFWP++GERKYDWEK+Q L TE G+LI+
Sbjct: 69 ALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQVMCLYATEVGSLIS 128
Query: 439 LGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVT 618
+G DS EFFHDP++ +SNAGQVRKSLSIKP+ADGSGYFISL+VVN+ KTN+RF VPVT
Sbjct: 129 MGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVT 188
Query: 619 SAEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQS---PMRRNSEWDR 759
+AEFAV+RT+FSFALP IMGWDR+TN+ + ++ S P +EWDR
Sbjct: 189 TAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238
>gb|ADL36848.1| WHY domain class transcription factor [Malus domestica]
Length = 237
Score = 254 bits (649), Expect = 4e-65
Identities = 131/238 (55%), Positives = 166/238 (69%), Gaps = 10/238 (4%)
Frame = +1
Query: 76 ATTTMIRRHLCGKLLAGKAGQVKDSLSLHAHTFPAGIST----YVANGQTPVKTFAPYSI 243
++TT R H C +D+ S++A+T ST + G + + +A + I
Sbjct: 10 SSTTKFRSHFC----------TRDASSMYAYTHITRFSTATQKFSVKGPSSHQVYASFDI 59
Query: 244 FKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEA 423
FKGKAA S+ P+LPTFTKL SG + +DR G++ML F PAIGERKYDWEK+Q FALS TE
Sbjct: 60 FKGKAALSLTPVLPTFTKLESGSLVVDRRGSVMLKFTPAIGERKYDWEKRQMFALSATEV 119
Query: 424 GALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERF 603
GALI+LG DSCE FHDP++K+SNAGQVRKSLSIKPHADGSGYF+SL VVN++ KT E F
Sbjct: 120 GALISLGSNDSCELFHDPSMKSSNAGQVRKSLSIKPHADGSGYFVSLTVVNNLLKTRESF 179
Query: 604 IVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQKPA------ASMENQSPMRRNSEWDR 759
VPV +AEFAV++T+ SFALP IMGWDR TN+ PA E+++ + EWDR
Sbjct: 180 SVPVMTAEFAVMKTACSFALPHIMGWDRLTNKMPAGGGGGGGGQESKAVPQLLEEWDR 237
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 252 bits (644), Expect = 2e-64
Identities = 119/186 (63%), Positives = 152/186 (81%), Gaps = 6/186 (3%)
Frame = +1
Query: 220 KTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQR 399
+ FAPYSIFKGKAA SVEP+LP+FT++ SG +++DR G++M+TF PAIGERKYDWEKKQ+
Sbjct: 52 RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 111
Query: 400 FALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNS 579
FALSPTE G+LI++G DS EFFHDP++K+SNAGQVRKSLS+KPHADGSGYFISL+V NS
Sbjct: 112 FALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNS 171
Query: 580 IQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQSPMRRNS---- 747
I KTN+ F+VPVT AEFAV++T+FSFALP IMGW+R T ++ +++ +
Sbjct: 172 ILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQL 231
Query: 748 --EWDR 759
EWD+
Sbjct: 232 ELEWDK 237
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 252 bits (644), Expect = 2e-64
Identities = 119/186 (63%), Positives = 152/186 (81%), Gaps = 6/186 (3%)
Frame = +1
Query: 220 KTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQR 399
+ FAPYSIFKGKAA SVEP+LP+FT++ SG +++DR G++M+TF PAIGERKYDWEKKQ+
Sbjct: 53 RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 112
Query: 400 FALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNS 579
FALSPTE G+LI++G DS EFFHDP++K+SNAGQVRKSLS+KPHADGSGYFISL+V NS
Sbjct: 113 FALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNS 172
Query: 580 IQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQSPMRRNS---- 747
I KTN+ F+VPVT AEFAV++T+FSFALP IMGW+R T ++ +++ +
Sbjct: 173 ILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQL 232
Query: 748 --EWDR 759
EWD+
Sbjct: 233 ELEWDK 238
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 252 bits (643), Expect = 2e-64
Identities = 117/160 (73%), Positives = 142/160 (88%)
Frame = +1
Query: 220 KTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQR 399
+ FAPYSIFKGKAA SVEP+LP+FT++ SG +++DR G++M+TF PAIGERKYDWEKKQ+
Sbjct: 57 RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 116
Query: 400 FALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNS 579
FALSPTE G+LI++G DS EFFHDP++K+SNAGQVRKSLSIKPHADGSGYFISL+V N
Sbjct: 117 FALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLSVNNG 176
Query: 580 IQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQ 699
I KTN+ F+VPVT AEFAV++T+FSFALP IMGW+R T Q
Sbjct: 177 ILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQ 216
>ref|XP_007019693.1| Whirly 2, putative isoform 1 [Theobroma cacao]
gi|508725021|gb|EOY16918.1| Whirly 2, putative isoform 1
[Theobroma cacao]
Length = 236
Score = 251 bits (642), Expect = 3e-64
Identities = 128/222 (57%), Positives = 159/222 (71%), Gaps = 7/222 (3%)
Frame = +1
Query: 115 LLAGKAGQVKDSLSLHAHTFPAGIST----YVANGQTPVKTFAPYSIFKGKAAFSVEPLL 282
LL+ K G V+D+L HA A IST + + G + + APY+++KGKAAFSV PLL
Sbjct: 15 LLSAKRGDVRDALWSHAFESRAAISTSIHDFASKGNSTARVIAPYTVYKGKAAFSVTPLL 74
Query: 283 PTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALINLGPTDSCE 462
PTF+K+ SG +KLDR G MMLTFWPA+GERKYDWEK+QRFALSPTE G+LI++G D E
Sbjct: 75 PTFSKIDSGNLKLDRRGAMMLTFWPAVGERKYDWEKRQRFALSPTEVGSLISMGAHDVSE 134
Query: 463 FFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVTSAEFAVLR 642
FFHDP++ +SNAGQV K L IK G+GY ISL V N+I K+NERF VP+T+AEFAVL+
Sbjct: 135 FFHDPSMLSSNAGQVSKKLYIKALDGGNGYMISLTVSNNILKSNERFNVPITTAEFAVLK 194
Query: 643 TSFSFALPRIMGWDRYTNQKP---AASMENQSPMRRNSEWDR 759
T+ SFALP I+GWD TN S +P +SEWDR
Sbjct: 195 TACSFALPHIIGWDWLTNHSRKGIEGSSSKVNPKLLDSEWDR 236
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 251 bits (642), Expect = 3e-64
Identities = 118/165 (71%), Positives = 143/165 (86%)
Frame = +1
Query: 205 GQTPVKTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDW 384
G+ + FAPYS+FKGKAA S EP LPTF +L SGG+KL+R G +MLTFWP++GERKYDW
Sbjct: 5 GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64
Query: 385 EKKQRFALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISL 564
EK+Q FALS TE G+LI++G DS EFFHDP++ +SNAGQVRKSLSIKP+ADGSGYFISL
Sbjct: 65 EKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISL 124
Query: 565 NVVNSIQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQ 699
+VVN+ KTN+RF VPVT+AEFAV+RT+FSFALP IMGWDR+TN+
Sbjct: 125 SVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 251 bits (641), Expect = 3e-64
Identities = 116/158 (73%), Positives = 142/158 (89%)
Frame = +1
Query: 220 KTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQR 399
+ FAPYSIFKGKAA SVEP+LP+FT++ SG +++DR G++M+TF PAIGERKYDWEKKQ+
Sbjct: 10 RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 69
Query: 400 FALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNS 579
FALSPTE G+LI++G DS EFFHDP++K+SNAGQVRKSLS+KPHADGSGYFISL+V NS
Sbjct: 70 FALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNS 129
Query: 580 IQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYT 693
I KTN+ F+VPVT AEFAV++T+FSFALP IMGW+R T
Sbjct: 130 ILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLT 167
>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
gi|297734756|emb|CBI16990.3| unnamed protein product
[Vitis vinifera]
Length = 231
Score = 251 bits (641), Expect = 3e-64
Identities = 127/226 (56%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
Frame = +1
Query: 94 RRHLCGKLLAGKAGQVKDSLSLHAHTFPAGIST----YVANGQTPVKTFAPYSIFKGKAA 261
R HL LL GK G +++ LHA T +ST + G P + +APY ++KGKA+
Sbjct: 11 RTHLSENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVYAPYCVYKGKAS 70
Query: 262 FSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDWEKKQRFALSPTEAGALINL 441
+V P+LP F++L SGG+K+DR+G MML F PA+GERKYDWEKKQ FALS E G+L++L
Sbjct: 71 LTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFALSAVEVGSLLSL 130
Query: 442 GPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVTS 621
P CEFFHDP++KTSNAGQVRKSLS+K DG YF+SL+VVN+IQKTNER VP+T+
Sbjct: 131 SPGGGCEFFHDPSMKTSNAGQVRKSLSVK-SMDGGSYFLSLSVVNNIQKTNERLAVPLTA 189
Query: 622 AEFAVLRTSFSFALPRIMGWDRYTNQKPAASMENQSPMRRNSEWDR 759
AEFAV++T+ SFALP I+GWDRY NQK + S + EWDR
Sbjct: 190 AEFAVMQTACSFALPHILGWDRYMNQKLPRTEATPSTL----EWDR 231
>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
Length = 178
Score = 249 bits (636), Expect = 1e-63
Identities = 117/165 (70%), Positives = 142/165 (86%)
Frame = +1
Query: 205 GQTPVKTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWPAIGERKYDW 384
G+ + FAPYS+FKG AA S EP LPTF +L SGG+KL+R G +MLTFWP++GERKYDW
Sbjct: 5 GKREGRVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64
Query: 385 EKKQRFALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHADGSGYFISL 564
EK+Q FALS TE G+LI++G DS EFFHDP++ +SNAGQVRKSLSIKP+ADGSGYFISL
Sbjct: 65 EKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISL 124
Query: 565 NVVNSIQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQ 699
+VVN+ KTN+RF VPVT+AEFAV+RT+FSFALP IMGWDR+TN+
Sbjct: 125 SVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>gb|AFK37234.1| unknown [Lotus japonicus]
Length = 235
Score = 249 bits (635), Expect = 2e-63
Identities = 121/200 (60%), Positives = 154/200 (77%), Gaps = 6/200 (3%)
Frame = +1
Query: 178 AGISTYVANGQTPVKTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNGNMMLTFWP 357
A TYVA G T + FAPY ++KGKAA S+ P+LPTFTKL SG + ++R G++M+ F P
Sbjct: 36 AARETYVAKGYTTDRVFAPYYVYKGKAAMSLSPVLPTFTKLDSGALVVERRGSIMMVFTP 95
Query: 358 AIGERKYDWEKKQRFALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRKSLSIKPHA 537
AIGERKYDWEK+Q+FALS TE G+LI +GP DSCEFFHDP++ +SNAGQVRKSLSIKPHA
Sbjct: 96 AIGERKYDWEKRQKFALSATEVGSLIAMGPQDSCEFFHDPSMSSSNAGQVRKSLSIKPHA 155
Query: 538 DGSGYFISLNVVNSIQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYTNQK---PA 708
+ SGYF+SL VVN++ E F VPVT+AEFAV++T+ SFALP IMGWDR TNQ+ P
Sbjct: 156 NSSGYFVSLTVVNNLLNAKENFNVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSSLPG 215
Query: 709 ASMENQSPMRR---NSEWDR 759
++ QS + + + EWD+
Sbjct: 216 GTVGLQSKVDKPVFDLEWDK 235
>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
gi|355501485|gb|AES82688.1| hypothetical protein
MTR_7g116270 [Medicago truncatula]
gi|388497124|gb|AFK36628.1| unknown [Medicago
truncatula]
Length = 226
Score = 248 bits (632), Expect = 4e-63
Identities = 122/205 (59%), Positives = 158/205 (77%), Gaps = 4/205 (1%)
Frame = +1
Query: 157 LHAHTFPAGIST-YVANGQTPVKTFAPYSIFKGKAAFSVEPLLPTFTKLSSGGIKLDRNG 333
L+A F + Y A G T + FAPYS++KGKAAFS+ P LPTFTKL SG + +DR+G
Sbjct: 24 LYARDFSTATNNNYSAKGYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRHG 83
Query: 334 NMMLTFWPAIGERKYDWEKKQRFALSPTEAGALINLGPTDSCEFFHDPAIKTSNAGQVRK 513
++M++F PAIGERKYDWEK+Q FALS TE G+LI +GP DSCEFFHDP++K+SNAGQVRK
Sbjct: 84 SIMMSFMPAIGERKYDWEKRQIFALSATEVGSLIAIGPQDSCEFFHDPSMKSSNAGQVRK 143
Query: 514 SLSIKPHADGSGYFISLNVVNSIQKTNERFIVPVTSAEFAVLRTSFSFALPRIMGWDRYT 693
SLSIKPH+ +GYF+SL+VVNS+ T + F VPVT+AEFAV++T+ SFALP IMGWDR T
Sbjct: 144 SLSIKPHS--NGYFVSLSVVNSVLNTKDNFSVPVTTAEFAVMKTACSFALPHIMGWDRLT 201
Query: 694 NQKPAASMENQSPMRR---NSEWDR 759
NQ+ + ++ Q M + EW++
Sbjct: 202 NQQSSGTVSFQPKMNSQILDLEWEK 226