BLASTX nr result

ID: Paeonia24_contig00005826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00005826
         (1572 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   406   e-110
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              406   e-110
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...   376   e-101
ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   375   e-101
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   375   e-101
ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phas...   375   e-101
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol...   374   e-101
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus...   373   e-100
ref|XP_003594206.1| Transcription initiation factor IIF subunit ...   372   e-100
ref|XP_006586768.1| PREDICTED: transcription initiation factor I...   372   e-100
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   372   e-100
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   372   e-100
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   372   e-100
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   369   2e-99
ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prun...   358   3e-96
ref|XP_004486214.1| PREDICTED: transcription initiation factor I...   355   4e-95
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp...   342   2e-91
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   339   2e-90
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   339   2e-90
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   337   7e-90

>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  406 bits (1044), Expect = e-110
 Identities = 241/491 (49%), Positives = 273/491 (55%), Gaps = 8/491 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVR +SS +KNYFIGRFVTGLP FSKKK+A+ KWSL+KEGLQGRQ++DALREK
Sbjct: 48   TRLIREYNVRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREK 107

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQ+QYHGQLEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 108  YKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLT 167

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV-----NFXXXXXXXXXXXXXXXXX 527
            L              DGYQRWMMK ANNG AAFGEV                        
Sbjct: 168  LEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGD 227

Query: 528  XXXXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEE 704
                               RK R G NK  GDDD+EGPRG               WEHEE
Sbjct: 228  EEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEE 287

Query: 705  IFTDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRT 884
            IFTDDDEA+GND E+REDLAPE+P PPEIKQD                          + 
Sbjct: 288  IFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKA 347

Query: 885  NGMNES-XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSP-XXXXXXXXXXXXXXXX 1058
             GMN+S                SPVLAPKQKD  KEEP +NSP                 
Sbjct: 348  AGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKS 407

Query: 1059 XXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXX 1238
                   NGDD                           S SKV   P KGT         
Sbjct: 408  SKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATP-KGT----PSSSV 462

Query: 1239 XXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH 1418
                       TE+EIRAVL+++A +TT  LV  FKARL+++EDKKAFADILR+ISKI  
Sbjct: 463  KTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQK 522

Query: 1419 KDGGSYVILRN 1451
             +G +YV+LR+
Sbjct: 523  TNGPNYVVLRD 533


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  406 bits (1044), Expect = e-110
 Identities = 241/491 (49%), Positives = 273/491 (55%), Gaps = 8/491 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVR +SS +KNYFIGRFVTGLP FSKKK+A+ KWSL+KEGLQGRQ++DALREK
Sbjct: 53   TRLIREYNVRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQ+QYHGQLEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV-----NFXXXXXXXXXXXXXXXXX 527
            L              DGYQRWMMK ANNG AAFGEV                        
Sbjct: 173  LEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGD 232

Query: 528  XXXXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEE 704
                               RK R G NK  GDDD+EGPRG               WEHEE
Sbjct: 233  EEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEE 292

Query: 705  IFTDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRT 884
            IFTDDDEA+GND E+REDLAPE+P PPEIKQD                          + 
Sbjct: 293  IFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKA 352

Query: 885  NGMNES-XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSP-XXXXXXXXXXXXXXXX 1058
             GMN+S                SPVLAPKQKD  KEEP +NSP                 
Sbjct: 353  AGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKS 412

Query: 1059 XXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXX 1238
                   NGDD                           S SKV   P KGT         
Sbjct: 413  SKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATP-KGT----PSSSV 467

Query: 1239 XXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH 1418
                       TE+EIRAVL+++A +TT  LV  FKARL+++EDKKAFADILR+ISKI  
Sbjct: 468  KTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQK 527

Query: 1419 KDGGSYVILRN 1451
             +G +YV+LR+
Sbjct: 528  TNGPNYVVLRD 538


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
            gi|561027365|gb|ESW26005.1| hypothetical protein
            PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  376 bits (966), Expect = e-101
 Identities = 225/489 (46%), Positives = 264/489 (53%), Gaps = 6/489 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREY+VRASS ++K+YFIGRFV+GLP+FSKKKSAE KWSL KEGLQ RQ+TDALREK
Sbjct: 53   TRLIREYSVRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQ Q+ G LEGA SATYYLLMM+ KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWLLEDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGE---VNFXXXXXXXXXXXXXXXXXXX 533
            L              DGY+RWMMK ANNG AAFGE    +                    
Sbjct: 173  LEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDE 232

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQN-KGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                            +R+ R G N KGGDDD+EGPRG               WEHEEIF
Sbjct: 233  EGHVSDKGEEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIF 292

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPE+P PPEIKQD                          RT+G
Sbjct: 293  TDDDEAVGNDPEEREDLAPEVPAPPEIKQD-DEDEDEDNEEGGGLSKSGKELKKLLRTSG 351

Query: 891  MNESXXXXXXXXXXXXXXTS--PVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXX 1064
            +NES                  PV+A K KD  KEEP +NSP                  
Sbjct: 352  LNESDAEDDDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAVTGTARGTLSTSKP 411

Query: 1065 XXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXX 1244
                   ++                            ++  N+ P KG +          
Sbjct: 412  SKGKRKLNEETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKG-VPPTPSSKGGS 470

Query: 1245 XXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKD 1424
                     +EEEIRAVLM++  +TT  LV  F+ARLR  EDKKAFADIL++ISKI   +
Sbjct: 471  SSPIASGPVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTN 530

Query: 1425 GGSYVILRN 1451
              SYVILR+
Sbjct: 531  ASSYVILRD 539


>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  375 bits (963), Expect = e-101
 Identities = 226/488 (46%), Positives = 262/488 (53%), Gaps = 6/488 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRA SSN+KN+FI RF +GLP FSKKK+ + KW+L KEGLQGRQ+TD LREK
Sbjct: 53   TRLIREYNVRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREK 111

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQFQ+HG LEGA SA YYLLMMQG+E  AIPAGSWYNFNKVA+YKQL+
Sbjct: 112  YKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLT 171

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGYQRWMMK ANNG AAFGEV   +                    
Sbjct: 172  LEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDED 231

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNKGG-DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                            +RK R G NK G DDD+EGPRG               WEHEEIF
Sbjct: 232  EGNASDHGDEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIF 291

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPEIP PPEIKQD                          + NG
Sbjct: 292  TDDDEAVGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANG 351

Query: 891  MNESXXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVE-NSPXXXXXXXXXXXXXXXXXXX 1067
            +NES               SPVLAPK K+  KEEPVE NSP                   
Sbjct: 352  LNESDAEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTPTSKSAK 411

Query: 1068 XXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXX 1247
                   D                           S++K + +P+  + +          
Sbjct: 412  TKRKANGDESKPTSGAPLKKVKTETDAKPGKDETPSSAKNSALPKGASSS------SKTA 465

Query: 1248 XXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KD 1424
                    TE+EIRAVL++R  +TT  LV  FK+RL+ KEDK AFA++LRKISKI     
Sbjct: 466  PSPATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTT 525

Query: 1425 GGSYVILR 1448
            G SYV+LR
Sbjct: 526  GSSYVVLR 533


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Solanum tuberosum]
            gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  375 bits (963), Expect = e-101
 Identities = 226/488 (46%), Positives = 262/488 (53%), Gaps = 6/488 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRA SSN+KN+FI RF +GLP FSKKK+ + KW+L KEGLQGRQ+TD LREK
Sbjct: 53   TRLIREYNVRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREK 111

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQFQ+HG LEGA SA YYLLMMQG+E  AIPAGSWYNFNKVA+YKQL+
Sbjct: 112  YKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLT 171

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGYQRWMMK ANNG AAFGEV   +                    
Sbjct: 172  LEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDED 231

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNKGG-DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                            +RK R G NK G DDD+EGPRG               WEHEEIF
Sbjct: 232  EGNASDHGDEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIF 291

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPEIP PPEIKQD                          + NG
Sbjct: 292  TDDDEAVGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANG 351

Query: 891  MNESXXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVE-NSPXXXXXXXXXXXXXXXXXXX 1067
            +NES               SPVLAPK K+  KEEPVE NSP                   
Sbjct: 352  LNESDAEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTPTSKSAK 411

Query: 1068 XXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXX 1247
                   D                           S++K + +P+  + +          
Sbjct: 412  TKRKANGDESKPTSGAPLKKVKTETDAKPGKDETPSSAKNSALPKGASSS------SKTA 465

Query: 1248 XXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KD 1424
                    TE+EIRAVL++R  +TT  LV  FK+RL+ KEDK AFA++LRKISKI     
Sbjct: 466  PSPATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTT 525

Query: 1425 GGSYVILR 1448
            G SYV+LR
Sbjct: 526  GSSYVVLR 533


>ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
            gi|561020883|gb|ESW19654.1| hypothetical protein
            PHAVU_006G143600g [Phaseolus vulgaris]
          Length = 540

 Score =  375 bits (962), Expect = e-101
 Identities = 226/490 (46%), Positives = 262/490 (53%), Gaps = 7/490 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRASS+N+KNYFIGRF+TGLP+FSKKKSAE KW+L KEGL GRQ+TD LREK
Sbjct: 53   TRLIREYNVRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQ QY G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWLLEDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEVNFXXXXXXXXXXXXXXXXXXXXXX 542
            L              DGYQRWMMK ANNG AAFG+                         
Sbjct: 173  LEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGDHGKFDEKESNTGGGRSRKKTGEEEE 232

Query: 543  XXXXXXXXXXXG--GSRKKRPG-QNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFT 713
                            RK R G   +  DDD+EGPRG               WEHEEIFT
Sbjct: 233  GHVSDKGEEDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFT 292

Query: 714  DDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGM 893
            DDDEA+GND E+REDLAPE+P PPEIKQD                          + +G+
Sbjct: 293  DDDEAVGNDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGL 352

Query: 894  NES---XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXX 1064
            NES                   PV+A K KD  KEEPV+NSP                  
Sbjct: 353  NESDAEDEDDDDDDMDDEVGNPPVIATKTKDAPKEEPVDNSPSKPTATGPARGTPSSKSS 412

Query: 1065 XXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXX 1244
                 + ++                          GSASK N  P KG  T         
Sbjct: 413  KGKRKSNEEVKPTNTATPKKVKQENEPKSSAKDVNGSASKSN-APPKG--TPPSSSSKPG 469

Query: 1245 XXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-K 1421
                     +EEEIRAVL ++  +TT  LV  FKARLR+ EDK+AFA+IL++ISKI    
Sbjct: 470  SSATASGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTA 529

Query: 1422 DGGSYVILRN 1451
            +G SYVILR+
Sbjct: 530  NGSSYVILRD 539


>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao] gi|508781613|gb|EOY28869.1|
            Transcription activators,DNA binding,RNA polymerase II
            transcription factors,catalytics,transcription initiation
            factors isoform 1 [Theobroma cacao]
          Length = 549

 Score =  374 bits (960), Expect = e-101
 Identities = 230/500 (46%), Positives = 270/500 (54%), Gaps = 17/500 (3%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVR S S +KN+FIGRF++GLP+FSKKK+AE KWSL KEGLQGRQLTD LREK
Sbjct: 53   TRLIREYNVRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPW+LEDETGQ QY G LEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWMLEDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGY+RWMMK ANNGAAAFGEV   +                    
Sbjct: 173  LEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDD 232

Query: 534  XXXXXXXXXXXXXXGGSRKKRPG-QNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                            +RK R G   KGGDDD+EGPRG               WEHEEIF
Sbjct: 233  EGHVSDRGEEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIF 292

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GN+ E+R DLAPE+P PPEIK+D                          +  G
Sbjct: 293  TDDDEAVGNEPEER-DLAPEVPAPPEIKED--EDEEDEEQEGGLSKSGKELKKLLGKAGG 349

Query: 891  MNESXXXXXXXXXXXXXXT-SPVLAPKQKDRVKEEPVENSP--XXXXXXXXXXXXXXXXX 1061
            +N+S              + +P  A KQKD  KEEP +NSP                   
Sbjct: 350  LNDSDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARGTSTASKSA 409

Query: 1062 XXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKG---------TL 1214
                  NGDD                           SASK   +P KG         T 
Sbjct: 410  KGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASK-GSVPPKGTPSSAKAGSTS 468

Query: 1215 TXXXXXXXXXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADIL 1394
            +                  TEEEIRAVL+++A +TT+ LV  FKARL++ EDKKAFADIL
Sbjct: 469  SAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADIL 528

Query: 1395 RKISKIMHKDG-GSYVILRN 1451
            R+ISKI   +G  +YV+LR+
Sbjct: 529  RRISKIQKTNGPNNYVVLRD 548


>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
          Length = 534

 Score =  373 bits (957), Expect = e-100
 Identities = 226/486 (46%), Positives = 260/486 (53%), Gaps = 4/486 (0%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRASSS+EKNY IGRF TGLP F KK   +  W+  KEGLQGRQ+TD+LREK
Sbjct: 53   TRLIREYNVRASSSSEKNYIIGRFATGLPTFKKKN--DNNWTFQKEGLQGRQVTDSLREK 110

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            FKNKPWLLEDETGQFQYHG  EG+ SATYYLLM+QGKEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 111  FKNKPWLLEDETGQFQYHGHFEGSQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLT 170

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEVN--FXXXXXXXXXXXXXXXXXXXX 536
            L              DGYQRWMMK ANNG AAFGEV                        
Sbjct: 171  LEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDGEGASGGGRGRKKSTGDDDE 230

Query: 537  XXXXXXXXXXXXXGGSRKKRPGQN-KGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFT 713
                           SRK R G N K  DDD+EGPRG               WEHEEIFT
Sbjct: 231  GNVSDRGDEDEEEEASRKGRLGLNKKHADDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFT 290

Query: 714  DDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGM 893
            DDDEA+GND E+REDLAPEIP PPEIKQD                          R+NGM
Sbjct: 291  DDDEAVGNDPEEREDLAPEIPAPPEIKQDDDDEDEDGEEEGGLSKSGKELKKLLGRSNGM 350

Query: 894  NES-XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXX 1070
            ++S                SPVLAPK K+  KEEP++NSP                    
Sbjct: 351  DDSDAEDDDDDDDDMEDDISPVLAPK-KEAPKEEPIDNSPLKSTTSGAGRGTPNGSKSKS 409

Query: 1071 XXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXX 1250
               +  +                          GS+SK +  P KG              
Sbjct: 410  KRKSNGEESKTTNGAPLKKAKTENEVKSVKDEIGSSSK-SSAPTKGA---TPPAPSVSAS 465

Query: 1251 XXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGG 1430
                   TEEEIRAVL+++  +TT  LV  FK+RL+ KEDK AFA ILR+IS+I   +G 
Sbjct: 466  APPTGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGA 525

Query: 1431 SYVILR 1448
            ++V+LR
Sbjct: 526  NFVVLR 531


>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
            truncatula] gi|87241158|gb|ABD33016.1| Transcription
            Factor IIF, Rap30/Rap74, interaction [Medicago
            truncatula] gi|355483254|gb|AES64457.1| Transcription
            initiation factor IIF subunit alpha [Medicago truncatula]
          Length = 536

 Score =  372 bits (956), Expect = e-100
 Identities = 225/489 (46%), Positives = 265/489 (54%), Gaps = 7/489 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRASS+N+KNYFIGRF+TGLP+FSKKKSAE KWSL K+GL+GRQ+TDA REK
Sbjct: 51   TRLIREYNVRASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREK 110

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KN+PWLLEDETGQ Q+ G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 111  YKNRPWLLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLT 170

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGE---VNFXXXXXXXXXXXXXXXXXXX 533
            L              DGYQRWMMK ANNG AAFGE   ++                    
Sbjct: 171  LEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDED 230

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFT 713
                             RKKRP +    DDD+EGPRG               WEHEEIFT
Sbjct: 231  EGPSSDKGEEDEDEEVDRKKRPNKKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFT 290

Query: 714  DDDEAIGNDAEDREDLAPEIPPPPEIKQD--XXXXXXXXXXXXXXXXXXXXXXXXXXRTN 887
            DDDEA+GND E+REDLAPE+P PPEIKQD                            RT 
Sbjct: 291  DDDEAVGNDPEEREDLAPEVPAPPEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTG 350

Query: 888  GMNES--XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXX 1061
            G++ES                   V A KQK+  KEEPV+NSP                 
Sbjct: 351  GLSESDDDDDDDDDDIDDEDGVPAVTATKQKE-PKEEPVDNSPSKPTATGPARGTPTSKS 409

Query: 1062 XXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXX 1241
                    ++                          GS+SK N  P +GT          
Sbjct: 410  SKAKRKANEEAKPSISVPPKKVKTENEPKSSAKDVNGSSSKSN-APPRGT---PPPSSNS 465

Query: 1242 XXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHK 1421
                      TEEEI+AVL++R  +TT +LV  F+ARLR KEDK+AFA+IL++ISKI   
Sbjct: 466  GSSNAASGPVTEEEIKAVLLQRTPLTTQELVAKFRARLRCKEDKEAFANILKRISKIQKT 525

Query: 1422 DGGSYVILR 1448
            +G SYVILR
Sbjct: 526  NGSSYVILR 534


>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 536

 Score =  372 bits (955), Expect = e-100
 Identities = 227/490 (46%), Positives = 260/490 (53%), Gaps = 7/490 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRASS N+KNYFIGRF+ GLP+FSKKKSAE KWSL K+GL GRQ+TD LREK
Sbjct: 53   TRLIREYNVRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQ Q+ G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWLLEDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEVN--FXXXXXXXXXXXXXXXXXXXX 536
            L              DGYQRWMMK ANNG AAFGE                         
Sbjct: 173  LEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDE 232

Query: 537  XXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFT 713
                            RK R G NK  G+DD+EGPRG               WEHEEIFT
Sbjct: 233  GHVSDKGEEDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFT 292

Query: 714  DDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGM 893
            DDDEA+GND E+REDLAPE+P PPEIKQD                          + +G+
Sbjct: 293  DDDEAVGNDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGL 352

Query: 894  NES---XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXX 1064
            NES                   PV+A KQKD +KEEP++NSP                  
Sbjct: 353  NESDAEDDDDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSP-----SKPTATGPARGTP 407

Query: 1065 XXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXX 1244
                  G                            GSASK +  P KGT           
Sbjct: 408  SSKSSKGKRKLNEETKPSNTATPKKEPKLSAKDVNGSASK-SSAPPKGT-PPLSSKGGSS 465

Query: 1245 XXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-K 1421
                     +EEEIRAVL ++  +TT  LV  FKARLR  EDK+AFA+IL++ISKI    
Sbjct: 466  TTTTASGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTT 525

Query: 1422 DGGSYVILRN 1451
             G SYVILR+
Sbjct: 526  TGASYVILRD 535


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  372 bits (955), Expect = e-100
 Identities = 230/493 (46%), Positives = 267/493 (54%), Gaps = 11/493 (2%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVR S+S++KNYFIGRFV+GLP+FSKKK+AE KW+L+K+GLQGRQ+TD LREK
Sbjct: 53   TRLIREYNVRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPW+LEDETGQ QY G LEG+ SATYYLL+M  KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWMLEDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGY+RWMMK ANNGAAAFGEV   +                    
Sbjct: 173  LEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDED 232

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                             RK R G NK G DDD+EGPRG               WEHEEIF
Sbjct: 233  EGNVSDRGEEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIF 292

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPE+P PPEIKQD                          R NG
Sbjct: 293  TDDDEAVGNDPEEREDLAPEVPAPPEIKQD--EEDEDEEEEGGLSKSGKELKKLLGRANG 350

Query: 891  MNESXXXXXXXXXXXXXXT---SPVLAPKQKDR-VKEEPVENSP--XXXXXXXXXXXXXX 1052
            +NES                  SP+LAPK KD   KEEP +NSP                
Sbjct: 351  LNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTS 410

Query: 1053 XXXXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXX 1232
                     NGDD                           SASK +  P KG  +     
Sbjct: 411  KSAKGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASK-SSAPAKGASS----- 464

Query: 1233 XXXXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKI 1412
                         T EEIRAVL+++A +TT  LV  FK RLR+ ED+ AFADIL++ISKI
Sbjct: 465  -SRTGSTSASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKI 523

Query: 1413 MHKDGGS-YVILR 1448
               +G S YV+LR
Sbjct: 524  QKTNGPSNYVVLR 536


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  372 bits (955), Expect = e-100
 Identities = 230/493 (46%), Positives = 267/493 (54%), Gaps = 11/493 (2%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVR S+S++KNYFIGRFV+GLP+FSKKK+AE KW+L+K+GLQGRQ+TD LREK
Sbjct: 53   TRLIREYNVRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPW+LEDETGQ QY G LEG+ SATYYLL+M  KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNKPWMLEDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGY+RWMMK ANNGAAAFGEV   +                    
Sbjct: 173  LEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDED 232

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                             RK R G NK G DDD+EGPRG               WEHEEIF
Sbjct: 233  EGNVSDRGEEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIF 292

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPE+P PPEIKQD                          R NG
Sbjct: 293  TDDDEAVGNDPEEREDLAPEVPAPPEIKQD--EEDEDEEEEGGLSKSGKELKKLLGRANG 350

Query: 891  MNESXXXXXXXXXXXXXXT---SPVLAPKQKDR-VKEEPVENSP--XXXXXXXXXXXXXX 1052
            +NES                  SP+LAPK KD   KEEP +NSP                
Sbjct: 351  LNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTS 410

Query: 1053 XXXXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXX 1232
                     NGDD                           SASK +  P KG  +     
Sbjct: 411  KSAKGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASK-SSAPAKGASS----- 464

Query: 1233 XXXXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKI 1412
                         T EEIRAVL+++A +TT  LV  FK RLR+ ED+ AFADIL++ISKI
Sbjct: 465  -SRTGSTSASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKI 523

Query: 1413 MHKDGGS-YVILR 1448
               +G S YV+LR
Sbjct: 524  QKTNGPSNYVVLR 536


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Cucumis sativus]
          Length = 538

 Score =  372 bits (954), Expect = e-100
 Identities = 228/495 (46%), Positives = 265/495 (53%), Gaps = 13/495 (2%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRAS+SN+KNYFIGRF++GLPNFSKK++AE KWSL KEGLQGRQL+DALREK
Sbjct: 53   TRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KN+PWLLEDETGQFQ+ G LEG+ SATYYLL++QGKEF AIPAGSWYNFNKVA+YKQL+
Sbjct: 113  YKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGY+RWMMK A+NG AAFGEV   +                    
Sbjct: 173  LEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDEN 232

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNK---GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEE 704
                            +RK R G +K   G DDD+EGPRG               WEHEE
Sbjct: 233  EGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEE 292

Query: 705  IFTDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRT 884
            IFTDDDE    D E+REDLAPE+P PPEIKQD                          RT
Sbjct: 293  IFTDDDETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRT 352

Query: 885  NGMNESXXXXXXXXXXXXXXT--SPVLAPKQKDRVKEEPVENSP-XXXXXXXXXXXXXXX 1055
             G+N+S              T  +PVL  KQKD VKEE   NSP                
Sbjct: 353  GGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTA 412

Query: 1056 XXXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVND--IP-QKGTLTXXX 1226
                    NG+D                           + SK  D  +P  K T +   
Sbjct: 413  KTAKGKRKNGEDVKPSSAPPKKMKTE-------------TESKATDEGVPTSKSTASKGA 459

Query: 1227 XXXXXXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKIS 1406
                           TEEEIRAVL +R  +TT  LV  FKARLR  EDK AFA+ILR+IS
Sbjct: 460  PASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRIS 519

Query: 1407 KIMHKDGG-SYVILR 1448
            +I   +GG SYV+LR
Sbjct: 520  RIQKTNGGPSYVVLR 534


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Solanum lycopersicum]
          Length = 534

 Score =  369 bits (948), Expect = 2e-99
 Identities = 225/488 (46%), Positives = 261/488 (53%), Gaps = 6/488 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRA SSN+KN+FI RF +GLP FSKKK+ + KW+L KEGLQGRQ+TD LREK
Sbjct: 53   TRLIREYNVRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREK 111

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPWLLEDETGQFQ+HG LEGA SA YYLLMMQG+E  AIPAGSWYNFNKVA+YKQL+
Sbjct: 112  YKNKPWLLEDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLT 171

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGYQRWMMK ANNG AAFGE+   +                    
Sbjct: 172  LEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRKKTSGDED 231

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNKGG-DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                            +RK R G NK G DDD+EGPRG               WEHEEIF
Sbjct: 232  EGNASDHGDEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIF 291

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPEIP PPEIKQD                          + NG
Sbjct: 292  TDDDEAVGNDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANG 351

Query: 891  MNESXXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVE-NSPXXXXXXXXXXXXXXXXXXX 1067
            +NES               SPVLAPK K+  KEEPVE NSP                   
Sbjct: 352  LNES-DEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAASGSNRGTPTSKSAK 410

Query: 1068 XXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXX 1247
                   D                           S++K   +P+  + +          
Sbjct: 411  TKRKANGDESKPTSGAPLKKVKTEADAKPGKDETPSSAKNTALPKGASSS------SKTA 464

Query: 1248 XXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KD 1424
                    TE+EIRAVL++R  +TT  LV  FK+RL+ KEDK AFA++LRKISKI     
Sbjct: 465  PSSATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTT 524

Query: 1425 GGSYVILR 1448
            G SYV+LR
Sbjct: 525  GSSYVVLR 532


>ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
            gi|462407404|gb|EMJ12738.1| hypothetical protein
            PRUPE_ppa003970mg [Prunus persica]
          Length = 537

 Score =  358 bits (920), Expect = 3e-96
 Identities = 224/492 (45%), Positives = 258/492 (52%), Gaps = 9/492 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRAS+ N+KNYFIGRFVTGLP+FSKKK+AE KWSL+KEGLQGRQL+D LR+K
Sbjct: 53   TRLIREYNVRASTVNDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KNKPW+LEDETGQ QY G LEGA +ATYYLLM QGKEF AIPAGSW+NFNKVA+YKQL+
Sbjct: 113  YKNKPWVLEDETGQSQYQGHLEGAQTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEVNFXXXXXXXXXXXXXXXXXXXXXX 542
            L              DGY+RWMMK ANNGAAAFGEV                        
Sbjct: 173  LEEAEEKIKNRKKTADGYERWMMKAANNGAAAFGEVERFDKDNSVTSGKGRKKAGDDDDG 232

Query: 543  XXXXXXXXXXXGG---SRKKRPGQNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFT 713
                            +RK R  +  G DDDD+G RG               WEHEEIFT
Sbjct: 233  EGNVSDKGEEDEEEELARKNRLNKKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFT 292

Query: 714  DDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGM 893
            DDDEA+GN+ E+REDL  E+P PPEIKQD                          RT G+
Sbjct: 293  DDDEAVGNNPEEREDLELEVPAPPEIKQD-DEDEDEDDKEGGLSKSGKELKKLLGRTGGL 351

Query: 894  NESXXXXXXXXXXXXXXT---SPVLAPKQKDRVKEEPVENSP--XXXXXXXXXXXXXXXX 1058
            ++S                      APKQKD  KEEP +NSP                  
Sbjct: 352  DDSDAEDDDDDDDDMDDDIGFPQAAAPKQKDASKEEPSDNSPSKPVPSGSARGTPSTAKS 411

Query: 1059 XXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXX 1238
                   + DD                           SASK +  P KGT         
Sbjct: 412  AKGKRKLSADDAKTSNSAPPKKVKSENEQKVSTKEEPASASK-SSTPSKGT------PSV 464

Query: 1239 XXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH 1418
                       TEEEIR VL++R  +TT  LV  FKARLR +EDK AFA ILRKISKI  
Sbjct: 465  KVEPTSSSGPVTEEEIRTVLVQRTPVTTQDLVARFKARLRLQEDKTAFAAILRKISKIQK 524

Query: 1419 -KDGGSYVILRN 1451
              +G SYV+LR+
Sbjct: 525  TTNGSSYVVLRD 536


>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Cicer arietinum]
          Length = 538

 Score =  355 bits (910), Expect = 4e-95
 Identities = 224/491 (45%), Positives = 255/491 (51%), Gaps = 9/491 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRASS+N+KNYFIGRF+TGLP+FSKKKSAE KW L K+GLQ R++TDALREK
Sbjct: 53   TRLIREYNVRASSANDKNYFIGRFMTGLPDFSKKKSAENKWCLQKDGLQRREVTDALREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            FKN+PWLLEDETGQ QY G LEG+ SATYYLLM + KEFVA PAGSWYNFNKVA+YKQL+
Sbjct: 113  FKNRPWLLEDETGQSQYQGHLEGSQSATYYLLMKEKKEFVAXPAGSWYNFNKVAQYKQLT 172

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEVNFXXXXXXXXXXXXXXXXXXXXXX 542
            L              DGYQRWMMK ANNG AAFGE                         
Sbjct: 173  LEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGEHGKLDEKESNTGGGRSRKKTGDDDE 232

Query: 543  XXXXXXXXXXXGG--SRKKRPGQNKGG---DDDDEGPRGHXXXXXXXXXXXXXXWEHEEI 707
                            RK R G NK     DD+DEGP+G               WEHEEI
Sbjct: 233  GVVSDKGEEDEDEEVDRKSRLGLNKKSGYDDDEDEGPKGGDSDIDGDDIEKGDDWEHEEI 292

Query: 708  FTDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTN 887
            FTDDDEA+GND E+REDLAPEIP PPEIKQD                          RT+
Sbjct: 293  FTDDDEAVGNDPEEREDLAPEIPAPPEIKQDDDEEDEDNEEEGGLSKSGKELKKLLGRTS 352

Query: 888  GMNES---XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXX 1058
            G++ES                   PV A K++   KEEPV+ SP                
Sbjct: 353  GLDESDAEDDDDDDDDIDDEVGVPPVTAAKKEP--KEEPVDTSP-SKPTTTGPARGTPTS 409

Query: 1059 XXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXX 1238
                      +                          GS SK N  P KG          
Sbjct: 410  KSSKGKRKASEEAKPNIAPTKKVKTENEPKSSGKDVNGSTSKSN-APSKGA---PPPPSK 465

Query: 1239 XXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH 1418
                       TEEEIR VLM++  +TT  LV  FKARLR  EDK+AFA+IL++ISKI  
Sbjct: 466  AGSSTAASGPVTEEEIRTVLMQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQK 525

Query: 1419 -KDGGSYVILR 1448
              +G SYVILR
Sbjct: 526  TTNGSSYVILR 536


>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
            gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
            [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  342 bits (878), Expect = 2e-91
 Identities = 221/493 (44%), Positives = 250/493 (50%), Gaps = 11/493 (2%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRA++  +KNYFIGRFVTGLPNF  KK +E KWSL K+  QGRQ TDA REK
Sbjct: 53   TRLIREYNVRAAAPTDKNYFIGRFVTGLPNF--KKGSENKWSLRKDIPQGRQFTDAQREK 110

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
             KNKPW+LEDETGQFQY G LEG+ SATYYLL+MQ KEFVAIPAGSWYNFNKVA+YKQL+
Sbjct: 111  LKNKPWILEDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLT 170

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV-----NFXXXXXXXXXXXXXXXXX 527
            L              DGYQRWMMK ANNG A FGEV     +                  
Sbjct: 171  LEEAEEKMKNRRKTADGYQRWMMKAANNGPALFGEVDNDKESGGSSGGGGRGRKKSSGGD 230

Query: 528  XXXXXXXXXXXXXXXXGGSRKKRPGQN-KGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEE 704
                              SRK R G N K  DDD+EGPRG               WEHEE
Sbjct: 231  EDEGNVSDRGEEDEEEEASRKSRLGLNKKSNDDDEEGPRGGDLDMDDDDIEKGDDWEHEE 290

Query: 705  IFTDDDEAIGNDAEDRED-LAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXR 881
            IFTDDDEA+GND E+RED LAPEIP PPEIKQD                          +
Sbjct: 291  IFTDDDEAVGNDPEEREDLLAPEIPAPPEIKQD-EDDEENEEEEGGLSKSGKELKKLLGK 349

Query: 882  TNGMNESXXXXXXXXXXXXXXT-SPVLAPKQKDRVKEEPVENSP--XXXXXXXXXXXXXX 1052
             NG+NES                 PV   KQK+  KEEPVEN+P                
Sbjct: 350  ANGLNESDEDDDDDSDDEEETNFGPVTNSKQKEVAKEEPVENAPAKPTPSGPSRGTPPAK 409

Query: 1053 XXXXXXXXXNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXX 1232
                     +GD                            + SK N  P K         
Sbjct: 410  PSKGKRKLNDGDSKKPSSSVQKKVKTENDPKSSVKEERANTVSKSN-TPTKAVKAEPASA 468

Query: 1233 XXXXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKI 1412
                          +E IRAVLM++  +TT  LV  FKARL+ KEDK AFA+ILRKISKI
Sbjct: 469  PAASSSAATGPVTEDE-IRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKI 527

Query: 1413 MHKDGG-SYVILR 1448
                G  ++V+LR
Sbjct: 528  QKNAGSQNFVVLR 540


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  339 bits (869), Expect = 2e-90
 Identities = 191/344 (55%), Positives = 208/344 (60%), Gaps = 8/344 (2%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRAS+S+EKNYFIGRFVTGLP FSKKK+AE KWSL KEG+ GRQ+TD LREK
Sbjct: 53   TRLIREYNVRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQ 356
            FKNKPWLLEDETGQFQY G LEG+ SATYYLLMM GKEFVAIPAGSW  YNFNKVA YKQ
Sbjct: 113  FKNKPWLLEDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQ 172

Query: 357  LSLXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV----NFXXXXXXXXXXXXXXXX 524
            L+L              DGY+RWMMK A+NGAAAFGEV    +                 
Sbjct: 173  LTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANG 232

Query: 525  XXXXXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHE 701
                                RK R G NK GGDDD+EGPRG               WEHE
Sbjct: 233  DDDEGNVSDKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHE 292

Query: 702  EIFTDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXR 881
            EIFTDDDEA+  D E+REDLAPE+P PPEIKQD                          +
Sbjct: 293  EIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQD-EEDEDEENEEGGLSKSGKELKKLLGK 351

Query: 882  TNGMNESXXXXXXXXXXXXXXTSPVLAPKQKDRV-KEEPVENSP 1010
             NG+NES               SPVLAPKQKD V KEEP +NSP
Sbjct: 352  ANGLNESDAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSP 395



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = +3

Query: 1272 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1451
            TEEEIRAVL++   +TT  LV  FK+RLR  EDKKAFADILR+ISKI    G ++V+LR+
Sbjct: 475  TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 534


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  339 bits (869), Expect = 2e-90
 Identities = 191/344 (55%), Positives = 208/344 (60%), Gaps = 8/344 (2%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            TRLIREYNVRAS+S+EKNYFIGRFVTGLP FSKKK+AE KWSL KEG+ GRQ+TD LREK
Sbjct: 53   TRLIREYNVRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREK 112

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQ 356
            FKNKPWLLEDETGQFQY G LEG+ SATYYLLMM GKEFVAIPAGSW  YNFNKVA YKQ
Sbjct: 113  FKNKPWLLEDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQ 172

Query: 357  LSLXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV----NFXXXXXXXXXXXXXXXX 524
            L+L              DGY+RWMMK A+NGAAAFGEV    +                 
Sbjct: 173  LTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANG 232

Query: 525  XXXXXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHE 701
                                RK R G NK GGDDD+EGPRG               WEHE
Sbjct: 233  DDDEGNVSDKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHE 292

Query: 702  EIFTDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXR 881
            EIFTDDDEA+  D E+REDLAPE+P PPEIKQD                          +
Sbjct: 293  EIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQD-EEDEDEENEEGGLSKSGKELKKLLGK 351

Query: 882  TNGMNESXXXXXXXXXXXXXXTSPVLAPKQKDRV-KEEPVENSP 1010
             NG+NES               SPVLAPKQKD V KEEP +NSP
Sbjct: 352  ANGLNESDAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSP 395



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = +3

Query: 1272 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1451
            TEEEIRAVL++   +TT  LV  FK+RLR  EDKKAFADILR+ISKI    G ++V+LR+
Sbjct: 480  TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 539


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  337 bits (865), Expect = 7e-90
 Identities = 188/342 (54%), Positives = 210/342 (61%), Gaps = 6/342 (1%)
 Frame = +3

Query: 3    TRLIREYNVRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREK 182
            +RLIREYNVRASSS++KNYFIGRFVTGLP+FSKKK+AE KWSL KEGLQGRQLTDALREK
Sbjct: 54   SRLIREYNVRASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREK 113

Query: 183  FKNKPWLLEDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLS 362
            +KN+PWLLEDETGQFQY G LEG+ SATYYLL++QGKEFVAIPA SWYNFNKVA+YKQL+
Sbjct: 114  YKNRPWLLEDETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLT 173

Query: 363  LXXXXXXXXXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXX 533
            L              DGY+RWMMK ANNG AAFGEV   +                    
Sbjct: 174  LEEAEEKMRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDE 233

Query: 534  XXXXXXXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIF 710
                            +RK R G NK GGDDD+EGPRG               WEHEEIF
Sbjct: 234  EGNVSDRGDEDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIF 293

Query: 711  TDDDEAIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNG 890
            TDDDEA+GND E+REDLAPE+P PPEIKQD                          R  G
Sbjct: 294  TDDDEAVGNDREEREDLAPEVPAPPEIKQD-EDDEDEENEEGGLSKSGKELKKLLGRAGG 352

Query: 891  MNESXXXXXXXXXXXXXXT--SPVLAPKQKDRVKEEPVENSP 1010
            +N+S                 SPVLAPKQ    KEEP +NSP
Sbjct: 353  LNDSDAEDDDDDDDMDEDVSISPVLAPKQTP--KEEPADNSP 392



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = +3

Query: 1272 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1451
            TEEEIRAVL++   +TT  LV  FK+RL++ EDKKAFADILR+ISKI    G SYV+LR+
Sbjct: 473  TEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRD 532


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