BLASTX nr result
ID: Paeonia24_contig00004524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00004524
(594 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ... 119 5e-25
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ... 119 6e-25
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr... 118 1e-24
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] 118 1e-24
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab... 118 1e-24
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA... 117 2e-24
ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Popu... 116 4e-24
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g... 114 2e-23
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi... 113 5e-23
ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit T... 112 6e-23
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ... 112 6e-23
ref|XP_007210944.1| hypothetical protein PRUPE_ppa024121mg [Prun... 112 1e-22
ref|XP_004298704.1| PREDICTED: general transcription factor IIH ... 111 2e-22
ref|XP_006363721.1| PREDICTED: general transcription factor IIH ... 110 2e-22
ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780... 109 5e-22
ref|XP_002440981.1| hypothetical protein SORBIDRAFT_09g018330 [S... 108 9e-22
gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegil... 108 1e-21
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ... 108 1e-21
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare] 107 3e-21
gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays] 107 3e-21
>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
product [Vitis vinifera]
Length = 70
Score = 119 bits (299), Expect = 5e-25
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNA KGL I+CD+PMAQFIINMN S+PASQKFI+H LDSTHLFVQP V MIRSAISEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60
Query: 309 RDQNSYEKPA 338
R+QNSYEKPA
Sbjct: 61 REQNSYEKPA 70
>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
PREDICTED: general transcription factor IIH subunit
5-like isoform X2 [Citrus sinensis]
gi|568846949|ref|XP_006477304.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform X3
[Citrus sinensis]
Length = 70
Score = 119 bits (298), Expect = 6e-25
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CD+PMAQFIINMN S+P SQKFI+H LDSTHLFVQP + MIRSAI+EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF 60
Query: 309 RDQNSYEKPA 338
RDQNSYEKPA
Sbjct: 61 RDQNSYEKPA 70
>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
gi|557095010|gb|ESQ35592.1| hypothetical protein
EUTSA_v10009271mg [Eutrema salsugineum]
Length = 70
Score = 118 bits (296), Expect = 1e-24
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKG+ I+CD+PMAQFI+NMN S+P+SQKFI+H LD THLFVQP VE MIRS ISEF
Sbjct: 1 MVNAIKGVFISCDIPMAQFIVNMNSSMPSSQKFIIHVLDGTHLFVQPHVEQMIRSTISEF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
Length = 113
Score = 118 bits (296), Expect = 1e-24
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +3
Query: 126 IMVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISE 305
+MVNAIKG+ ++CD+PM QFI+NMN S+P SQKFI+H LDSTHLFVQP VE MIRSAIS+
Sbjct: 42 LMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISD 101
Query: 306 FRDQNSYEKP 335
FRDQNSYEKP
Sbjct: 102 FRDQNSYEKP 111
>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
Length = 71
Score = 118 bits (295), Expect = 1e-24
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKG+ I+CD+PM QFI+NMN S+P SQKFI+H LDSTHLFVQP VE MIRSAIS+F
Sbjct: 1 MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
thaliana] gi|38566546|gb|AAR24163.1| At1g12400
[Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
At1g12400 [Arabidopsis thaliana]
gi|332190754|gb|AEE28875.1| nucleotide excision repair,
TFIIH, subunit TTDA [Arabidopsis thaliana]
Length = 71
Score = 117 bits (294), Expect = 2e-24
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKG+ ++CD+PM QFI+NMN S+P SQKFI+H LDSTHLFVQP VE MIRSAIS+F
Sbjct: 1 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
gi|566147875|ref|XP_006368721.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147877|ref|XP_006368722.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346807|gb|ERP65289.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346808|gb|ERP65290.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346809|gb|ERP65291.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
Length = 70
Score = 116 bits (291), Expect = 4e-24
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNA KGL I+CD+PMAQFIIN+N SLPASQKFI+H LDSTH+FVQP V MIRSAIS+F
Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60
Query: 309 RDQNSYEKPA 338
R+QNSYEKP+
Sbjct: 61 REQNSYEKPS 70
>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
Os07g0573600 [Oryza sativa Japonica Group]
gi|215707252|dbj|BAG93712.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218199880|gb|EEC82307.1| hypothetical protein
OsI_26568 [Oryza sativa Indica Group]
gi|222637319|gb|EEE67451.1| hypothetical protein
OsJ_24828 [Oryza sativa Japonica Group]
Length = 131
Score = 114 bits (286), Expect = 2e-23
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CDVPMAQFI+N+N S+PAS KFILH LD TH+FVQP V MIRS ISEF
Sbjct: 62 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISEF 121
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 122 RDQNSYEKP 130
>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
gi|222630525|gb|EEE62657.1| hypothetical protein
OsJ_17460 [Oryza sativa Japonica Group]
Length = 81
Score = 113 bits (282), Expect = 5e-23
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CDVPMAQFI+N+N S+PAS KFILH LD TH+FVQP V MIR ISEF
Sbjct: 12 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRGKISEF 71
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 72 RDQNSYEKP 80
>ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao] gi|590677408|ref|XP_007040008.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao] gi|508777252|gb|EOY24508.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao] gi|508777253|gb|EOY24509.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao]
Length = 70
Score = 112 bits (281), Expect = 6e-23
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNA KGL I+CD+PMAQFI+N+N S+PASQKFI+H LD+TH FVQP MIRSAISEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIVNLNASMPASQKFIIHVLDNTHFFVQPHAAEMIRSAISEF 60
Query: 309 RDQNSYEKP 335
RDQNSY+KP
Sbjct: 61 RDQNSYDKP 69
>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
distachyon]
Length = 457
Score = 112 bits (281), Expect = 6e-23
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CDVPMAQFI+N+N S+PAS+KFI+H LD TH+FVQP V MIRS I+EF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_007210944.1| hypothetical protein PRUPE_ppa024121mg [Prunus persica]
gi|595860542|ref|XP_007211160.1| hypothetical protein
PRUPE_ppb011951mg [Prunus persica]
gi|462406679|gb|EMJ12143.1| hypothetical protein
PRUPE_ppa024121mg [Prunus persica]
gi|462406895|gb|EMJ12359.1| hypothetical protein
PRUPE_ppb011951mg [Prunus persica]
Length = 70
Score = 112 bits (279), Expect = 1e-22
Identities = 53/69 (76%), Positives = 59/69 (85%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNA KGL ++CD+PMAQFIIN N +LP SQ+FI+H LDSTHLFVQP MIRSAISEF
Sbjct: 1 MVNATKGLFVSCDIPMAQFIINYNNTLPPSQQFIIHVLDSTHLFVQPHAAEMIRSAISEF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_004298704.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
1 [Fragaria vesca subsp. vesca]
gi|470125430|ref|XP_004298705.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 70
Score = 111 bits (277), Expect = 2e-22
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNA +GL I+CD+PMAQFIIN N SLP SQKFI+H LD THLFVQP MI+SAISEF
Sbjct: 1 MVNATRGLFISCDIPMAQFIINYNNSLPQSQKFIIHVLDGTHLFVQPHAAEMIKSAISEF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006363721.1| PREDICTED: general transcription factor IIH subunit 5-like [Solanum
tuberosum]
Length = 70
Score = 110 bits (276), Expect = 2e-22
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNA+KGL ++CD+PM QFIINMN SLP SQKFI+H LD+THLFV+ + GMIRSAIS+F
Sbjct: 1 MVNAVKGLYLSCDIPMTQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAISDF 60
Query: 309 RDQNSYEKPA 338
RD N+YEKPA
Sbjct: 61 RDANTYEKPA 70
>ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780092 [Setaria italica]
Length = 70
Score = 109 bits (273), Expect = 5e-22
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CD+PMAQFIIN+N S+P S++FI+H LD TH+FVQP V MIRS I EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHMLDPTHMFVQPHVAEMIRSKIGEF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_002440981.1| hypothetical protein SORBIDRAFT_09g018330 [Sorghum bicolor]
gi|241946266|gb|EES19411.1| hypothetical protein
SORBIDRAFT_09g018330 [Sorghum bicolor]
Length = 70
Score = 108 bits (271), Expect = 9e-22
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CDVPMAQFI+N+N S+PAS++FI+H LD TH+FVQP V MIRS I+EF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASERFIVHMLDPTHMFVQPHVAEMIRSKIAEF 60
Query: 309 RDQNSYEKP 335
DQNSYEKP
Sbjct: 61 WDQNSYEKP 69
>gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegilops tauschii]
Length = 70
Score = 108 bits (269), Expect = 1e-21
Identities = 48/69 (69%), Positives = 60/69 (86%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CD+PMAQFI+NMN S+PAS+KFI+H LD TH+F+QP + I+S ++EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNMNASMPASEKFIVHILDPTHMFIQPNMGDYIKSKMAEF 60
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
general transcription factor IIH subunit 5-like [Cucumis
sativus]
Length = 70
Score = 108 bits (269), Expect = 1e-21
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKG+ I+CD+PMAQFIIN N SLPAS +FI+H LD+TH+FVQP V MIR+AISEF
Sbjct: 1 MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF 60
Query: 309 RDQNSYEKP 335
R+Q SYEKP
Sbjct: 61 REQISYEKP 69
>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 71
Score = 107 bits (267), Expect = 3e-21
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CD+PMAQFI+NMN S+PAS KFI+H LD TH+F+QP + I+S ++EF
Sbjct: 2 MVNAIKGLFISCDIPMAQFIVNMNASMPASDKFIVHILDPTHMFIQPNMGDYIKSKMAEF 61
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 62 RDQNSYEKP 70
>gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays]
Length = 154
Score = 107 bits (266), Expect = 3e-21
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = +3
Query: 129 MVNAIKGLLITCDVPMAQFIINMNKSLPASQKFILHELDSTHLFVQPGVEGMIRSAISEF 308
MVNAIKGL I+CDVPMAQFI+N+N S+P S++FI+H LD T++FVQP V MIRS I EF
Sbjct: 85 MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSKIGEF 144
Query: 309 RDQNSYEKP 335
RDQNSYEKP
Sbjct: 145 RDQNSYEKP 153