BLASTX nr result

ID: Paeonia24_contig00004049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00004049
         (317 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_007019869.1| Pentatricopeptide repeat superfamily protein...    57   3e-06

>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/55 (60%), Positives = 39/55 (70%)
 Frame = +3

Query: 9   AQKILIEMMDKGLRPHLPVYMKVLRQLQKFRRGDLASDLKIRFSGLSLGPCTETG 173
           AQKILIEM++KGL+P+  VY +VL  L K  R DLA DL+ RFS LS    TETG
Sbjct: 528 AQKILIEMIEKGLKPNFSVYKRVLEHLDKSGREDLAGDLRSRFSSLSFQSSTETG 582


>ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
           gi|449498723|ref|XP_004160616.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 494

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +3

Query: 9   AQKILIEMMDKGLRPHLPVYMKVLRQLQKFRRGDLASDLKIRFSGLSL 152
           AQKIL E+MD GL+PH  VY ++L++LQ   RGDLA+DLK + S +SL
Sbjct: 440 AQKILSELMDAGLKPHFHVYTRLLKKLQVQGRGDLANDLKRKISNVSL 487


>ref|XP_007019869.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508725197|gb|EOY17094.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 494

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +3

Query: 3   LIAQKILIEMMDKGLRPHLPVYMKVLRQLQKFRRGDLASDLKIRFSGLSLGPCTETG 173
           +IAQ IL EM++KGL+P+  VYM V +QLQK  R DLA +L+  FS L   P  + G
Sbjct: 438 VIAQSILSEMIEKGLKPNFAVYMTVTKQLQKSGREDLAGNLRSSFSSLISQPSADNG 494


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