BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00002284
         (5773 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...   352   e-136
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo...   351   e-135
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo...   347   e-134
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc...   351   e-133
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi...   350   e-133
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...   347   e-132
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]     344   e-130
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]      298   e-116
emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]         349   e-114
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   261   e-101
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc...   350   e-100
gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subc...   348   e-100
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   263   3e-99
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               264   5e-99
gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-c...   348   7e-99
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               263   7e-99
gb|AHM92948.1| polyprotein [Banana streak OL virus]                   245   2e-98
gb|AFH88829.1| ORFIII [Banana streak OL virus]                        246   2e-98
gb|ABI30268.1| polyprotein [Banana streak virus]                      245   2e-98
gb|ABE27943.1| ORFIII [Banana streak virus]                           245   2e-98

>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  352 bits (903), Expect(4) = e-136
 Identities = 169/273 (61%), Positives = 215/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 1270 KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 1329

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 1330 NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 1389

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP+I QRKM +IF +++ F++ YIDD+L FS+
Sbjct: 1390 AEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSR 1449

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  EH  HL+I   +   +G+I+ KKKM + K++I FLG  IG+G+I LQ HIA+  LEF
Sbjct: 1450 TYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILEF 1509

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 1510 PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 1542



 Score =  136 bits (342), Expect(4) = e-136
 Identities = 70/144 (48%), Positives = 99/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D   LGWGA+L  +P K++ K+ E++CRYASG Y+ K  V + 
Sbjct: 1573 LKPLELPLEESYFIIETDASQLGWGAVLKQRPTKYSSKSEEKVCRYASGSYKLK-TVGNT 1631

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+LA+  A+++F L++  K E T+RT+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 1632 DREILAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLN--SKKSSTRRWILFEDIIT 1688

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 1689 GNGYKVIFEHIKGKDNHLPDLLSR 1712



 Score = 42.7 bits (99), Expect(4) = e-136
 Identities = 48/240 (20%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
 Frame = -3

Query: 5651 IKVRCVVRIGDYEIKCL*LIDIGCSNCIINKIHVPDRYIVKAQEPI---------ISQQM 5499
            +KV+   ++     K L L+D GC+  II+     D+Y  +  E +         +S  M
Sbjct: 1055 VKVKLTPKVS---YKILALVDTGCTKNIIH-----DKYFXRCPEIVHTIDDNKAEVSTDM 1106

Query: 5498 NGEVFRYKDLIKPNSKISFETNCGKSIEYFLAVEGTWVRPLRLGVDLILGLSFLLKDNGS 5319
            +G       + K ++++++      +   ++  E T      +  D+I+GL FL +   +
Sbjct: 1107 SG-------IKKIHNQLAYNMEVYINATKYIIDEITIRDLSMINDDMIIGLRFLQQSVQT 1159

Query: 5318 VMISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQE 5139
             +I +  +    +    P  S+  K     +  +L   E       E       I E++ 
Sbjct: 1160 TVIHEQGITFIPYQNNVPYISEVRKRGG--VSPKLDNLEVPNLEPEE------RINEYEL 1211

Query: 5138 DDGIE------TDLNLLDIEVL----YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
             + I+      +++  + ++      Y  + S++DIE++I ++E + I+GE  ++YW+K+
Sbjct: 1212 SENIDNYYISNSNIECIGLQAFAPNWYRDIKSKRDIEKIIQRLEDIQIIGEIPMKYWEKN 1271



 Score = 28.1 bits (61), Expect(4) = e-136
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQR FN EDIKLV+
Sbjct: 1544 YAKLRKNGQRYFNSEDIKLVR 1564


>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  351 bits (900), Expect(4) = e-135
 Identities = 168/273 (61%), Positives = 215/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 1270 KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 1329

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 1330 NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 1389

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP+I QRKM +IF +++ F++ YIDD+L FS+
Sbjct: 1390 AEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSR 1449

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  EH  HL+I   +   +G+I+ KKKM + K++I FLG  IG+G+I LQ HIA+  L+F
Sbjct: 1450 TYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQF 1509

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 1510 PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 1542



 Score =  134 bits (336), Expect(4) = e-135
 Identities = 71/144 (49%), Positives = 99/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ 
Sbjct: 1573 LKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNT 1631

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E++A+  A+++F L++  K E T+RT+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 1632 DREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLN--SKKSSTRRWVLFEDIIT 1688

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 1689 GNGYKVIFEHIKGKDNNLPDMLSR 1712



 Score = 42.4 bits (98), Expect(4) = e-135
 Identities = 46/229 (20%), Positives = 100/229 (43%), Gaps = 22/229 (9%)
 Frame = -3

Query: 5609 KCL*LIDIGCSNCIINKIHVPDRYIVKAQEPI---------ISQQMNGEVFRYKDLIKPN 5457
            K L L+D GC+  II+     D+Y ++  E +         +S  M+G       + K +
Sbjct: 1066 KILALVDTGCTKNIIH-----DKYFIRCPEIVHTIDDNKAEVSTDMSG-------IKKIH 1113

Query: 5456 SKISFETNCGKSIEYFLAVEGTWVRPLRLGVDLILGLSFLLKDNGSVMISKDFLQISKHS 5277
            +++++      +   ++  E T      +  D+I+GL FL +   + +I +  +    + 
Sbjct: 1114 NQLAYNIEVYINATKYIIDEITIRDLSMINDDMIIGLRFLQQSVQTTVIHEQGITFIPYQ 1173

Query: 5276 LLAPIYSQNEK---TEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQEDDGIE------ 5124
               P  S   K   T  K  + ++   E            ++ I E++  + I+      
Sbjct: 1174 NNVPYISXVRKRGGTSPKLDNLEVPNLES-----------EERINEYELSENIDNYYISN 1222

Query: 5123 TDLNLLDIEVL----YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            +++  + ++      Y  + S++DIE++I ++E + I+GE   +YW K+
Sbjct: 1223 SNIECIGLQAFAPNWYRDIKSKRDIEKIIQRLEDIQIIGEIPXKYWXKN 1271



 Score = 28.1 bits (61), Expect(4) = e-135
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQR FN EDIKLV+
Sbjct: 1544 YAKLRKNGQRYFNSEDIKLVR 1564


>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1711

 Score =  347 bits (890), Expect(4) = e-134
 Identities = 166/273 (60%), Positives = 213/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 1263 KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 1322

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 1323 NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 1382

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP++ QRKM +IF  ++ FV+ YIDD+L FSK
Sbjct: 1383 AEESIEWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSK 1442

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +   H  HL++   +   +G+I+ KKKM + K+++ FLG  IG+G+I LQ HIA+  L+F
Sbjct: 1443 TYKXHIAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQF 1502

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 1503 PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 1535



 Score =  135 bits (339), Expect(4) = e-134
 Identities = 71/144 (49%), Positives = 99/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ 
Sbjct: 1566 LKPLELPLEESYFIIETDASQQGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNT 1624

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E++A+  A+++F L++  K E T+RT+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 1625 DREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLN--SKKSSTRRWILFEDIIT 1681

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 1682 GNGYRVIFEHIKGKDNSLPDMLSR 1705



 Score = 43.9 bits (102), Expect(4) = e-134
 Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 17/224 (7%)
 Frame = -3

Query: 5609 KCL*LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMN-GEVFRYKDLIKPNSKISFETN 5433
            K L L+D GC+  II+     D+Y +K  E + +   N  EV      IK          
Sbjct: 1059 KILALVDTGCTKNIIH-----DKYFIKCPEIVHTIDDNKAEVSTDMSGIK-----KIHNQ 1108

Query: 5432 CGKSIEYFL-----AVEGTWVRPLRL-GVDLILGLSFLLKDNGSVMISKDFLQISKHSLL 5271
               ++E ++      ++   +R L +   D+I+GL FL +   + +I +  +    +   
Sbjct: 1109 LAHNVEVYINGTKYIIDEITIRNLSMISDDMIIGLRFLQQSVQTTVIHEQGITFIPYQNN 1168

Query: 5270 APIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQEDDGIE------TDLNL 5109
             P  S+  K     I     E   N + E       + I E++  + I+      +++  
Sbjct: 1169 VPYISEVRKRGGARIKPDNLEA-LNLESE-------ERINEYELSENIDIYYISNSNIEC 1220

Query: 5108 LDIEVL----YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            + ++      Y  + S++DIE+++ ++E + I+GE  ++YW+K+
Sbjct: 1221 IGLQAFAPNWYRDIKSKKDIEKIVQRLEDIQIIGEIPMKYWEKN 1264



 Score = 26.9 bits (58), Expect(4) = e-134
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQ+ FN EDIKLV+
Sbjct: 1537 YAKLRKNGQKYFNSEDIKLVR 1557


>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 730

 Score =  351 bits (900), Expect(4) = e-133
 Identities = 167/273 (61%), Positives = 216/273 (79%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+++FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 103  KNAIECKINIINPEYIIKTSPIEATPKDIKEFKMHIEELLKLGAIRESRSPHRSAAFIVR 162

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 163  NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 222

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP+I QRKM +IF +++ F++ YIDD+L FS+
Sbjct: 223  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSR 282

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  EH  HL+I   +   +G+I+ KKKM + K++I FLG  IG+G+I LQ HIA+  L+F
Sbjct: 283  TYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQF 342

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR++I +L K+AGP
Sbjct: 343  PDAMNDKKKLQQFLGLVNYARNYINNLAKLAGP 375



 Score =  134 bits (338), Expect(4) = e-133
 Identities = 71/144 (49%), Positives = 99/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ 
Sbjct: 406  LKPLELPLEESYFIIETDASQYGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNT 464

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E++A+  A+++F L++  K E T+RT+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 465  DREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLN--SKKSSTRRWVLFEDIIT 521

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 522  GNGYKVIFEHIKGKDNNLPDMLSR 545



 Score = 39.7 bits (91), Expect(4) = e-133
 Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = -3

Query: 5183 RECQLIDKEIEEFQEDDGIETDLNLLDIEVLYYT-LMSEQDIEQLISKIEKLGILGENIL 5007
            R CQ +D +I     D G+   + L      +Y  + S++DIE++I ++E + I+GE  +
Sbjct: 39   RWCQRMDDQISFAGLDIGLVECIGLQAFAPNWYRDIKSKRDIEKIIQRLEDIQIIGEIPM 98

Query: 5006 RYWDKD 4989
            +YW+K+
Sbjct: 99   KYWEKN 104



 Score = 25.8 bits (55), Expect(4) = e-133
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK     QR FN EDIKLV+
Sbjct: 377  YAKLRKNSQRYFNSEDIKLVR 397


>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
            gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
            Indica Group]
          Length = 685

 Score =  350 bits (899), Expect(4) = e-133
 Identities = 168/273 (61%), Positives = 216/273 (79%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 165  KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 224

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLN+NT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 225  NHAEEVRGKSRMVINYKRLNNNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 284

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP+I QRKM +IF +++ F++ YIDD+L FS+
Sbjct: 285  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSR 344

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  EH  HL+I I +   +G+I+ KKKM + K++I FLG  IG+G+I LQ HIA+  L+F
Sbjct: 345  TYKEHIAHLEIFIRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQF 404

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 405  PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 437



 Score =  130 bits (328), Expect(4) = e-133
 Identities = 70/144 (48%), Positives = 98/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ 
Sbjct: 468  LKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNT 526

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E++A+  A+++F L++  K E T+ T+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 527  DREIMAIINAINAFRLYLGFK-EFTVITDCEAICRYYNQLN--SKKSSTRRWVLFEDIIT 583

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 584  GNGYKVIFEHIKGKDNNLPDMLSR 607



 Score = 39.3 bits (90), Expect(4) = e-133
 Identities = 29/138 (21%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
 Frame = -3

Query: 5363 DLILGLSFLLKDNGSVMISKDFLQISKHSLLAPIYSQNEK---TEAKFIDRQLKEKECNC 5193
            D+I+GL FL +   +++I +  +    +    P  S+  K   T  K  + ++   E   
Sbjct: 40   DMIIGLRFLQQSVQTIVIHEQGITFIPYQNNVPYISEVRKRGGTSPKLDNLEVPNLES-- 97

Query: 5192 KHERECQLIDKEIEEFQEDDGIE------TDLNLLDIEVL----YYTLMSEQDIEQLISK 5043
                     ++ I E++  + I+      +++  + ++      Y  + S++DIE++I +
Sbjct: 98   ---------EERINEYELSENIDNYYISNSNIECIGLQTFAPNWYRDIKSKRDIEKIIQR 148

Query: 5042 IEKLGILGENILRYWDKD 4989
            +E + I+GE  ++YW K+
Sbjct: 149  LEDIQIIGEIPIKYWGKN 166



 Score = 28.1 bits (61), Expect(4) = e-133
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQR FN EDIKLV+
Sbjct: 439  YAKLRKNGQRYFNSEDIKLVR 459


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 792

 Score =  347 bits (891), Expect(4) = e-132
 Identities = 165/273 (60%), Positives = 214/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++I+NPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 165  KNAIECKINILNPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 224

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 225  NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 284

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP++ QRKM +IF  ++ FV+ YIDD+L FSK
Sbjct: 285  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSK 344

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  +H  HL++   +   +G+I+ KKKM + K+++ FLG  IG+G+I LQ HIA+  L+F
Sbjct: 345  TYKDHIAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQF 404

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 405  PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 437



 Score =  135 bits (339), Expect(4) = e-132
 Identities = 71/144 (49%), Positives = 99/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ 
Sbjct: 468  LKPLELPLEESYFIIETDASQQGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNT 526

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E++A+  A+++F L++  K E T+RT+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 527  DREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLN--SKKSSTRRWILFEDIIT 583

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 584  GNGYRVIFEHIKGKDNSLPDMLSR 607



 Score = 37.7 bits (86), Expect(4) = e-132
 Identities = 29/135 (21%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
 Frame = -3

Query: 5363 DLILGLSFLLKDNGSVMISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHE 5184
            D+I+GL FL +   + +I +  +    +    P  S+  K     I     E   N + E
Sbjct: 40   DMIIGLRFLQQSVQTTVIHEQGITFIPYQNNVPYISEVRKRGGARIKPDNLEA-LNLESE 98

Query: 5183 RECQLIDKEIEEFQEDDGIE------TDLNLLDIEVL----YYTLMSEQDIEQLISKIEK 5034
                   + I E++  + I+      +++  + ++      Y  + S++DIE+++ ++E 
Sbjct: 99   -------ERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRDIKSKKDIEKIVQRLED 151

Query: 5033 LGILGENILRYWDKD 4989
            + I+GE  ++YW+K+
Sbjct: 152  IQIIGEIPMKYWEKN 166



 Score = 26.9 bits (58), Expect(4) = e-132
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQ+ FN EDIKLV+
Sbjct: 439  YAKLRKNGQKYFNSEDIKLVR 459


>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score =  344 bits (882), Expect(4) = e-130
 Identities = 166/273 (60%), Positives = 212/273 (77%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 845  KNAIECKINIINPEYIIKTSPIEATPKDIEQFKMHIEELLKLGAIRESRSPHRSAAFIVR 904

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMV NYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 905  NHAEEVRGKSRMVKNYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKM 964

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP+I QRKM +IF +++ F++ YI+D+L FS+
Sbjct: 965  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKMQNIFNENQEFILVYINDLLVFSR 1024

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  EH  HL+I   +   +G+I+ KKKM + K++I FLG  I +G+I LQ HIA+  L+F
Sbjct: 1025 TYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIREGKIHLQEHIAKKILQF 1084

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + KQ+QQFLGLVNYAR+ I +L K+AGP
Sbjct: 1085 PDAINDKKQLQQFLGLVNYARNHINNLAKLAGP 1117



 Score =  134 bits (336), Expect(4) = e-130
 Identities = 71/144 (49%), Positives = 99/144 (68%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ 
Sbjct: 1148 LKPLELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNT 1206

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E++A+  A+++F L++  K E T+RT+CEAI  +YN++N  SK+SS RRW+ F D   
Sbjct: 1207 DREIMAIINAINAFRLYLGFK-EFTVRTDCEAICRYYNQLN--SKKSSTRRWVLFEDIIT 1263

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G  + FEHIKGK+N   D+LSR
Sbjct: 1264 GNGYKVIFEHIKGKDNNLPDMLSR 1287



 Score = 33.5 bits (75), Expect(4) = e-130
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = -3

Query: 5090 YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            Y    S++DIE++I ++E + I+GE  + YW+K+
Sbjct: 813  YRDFKSKRDIEKIIQRLEDIQIIGEIPMIYWEKN 846



 Score = 27.7 bits (60), Expect(4) = e-130
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLV 4117
            +AK    GQR FN EDIKLV
Sbjct: 1119 YAKLRKNGQRYFNSEDIKLV 1138


>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
          Length = 2027

 Score =  298 bits (762), Expect(4) = e-116
 Identities = 150/266 (56%), Positives = 190/266 (71%)
 Frame = -1

Query: 4972 LDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVRKHSEIVR 4793
            L+I NP+  +RTA +    +D+E+FK  I ELL L +IRRS SPH+S+AFIVR H+E  R
Sbjct: 910  LNIKNPDLIIRTANLEYTPEDIEEFKKQIKELLDLKLIRRSTSPHRSAAFIVRNHAEQKR 969

Query: 4792 GKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKMHPESIEW 4613
            GK+R+V NYKRLNDNT +D Y++P K  ++N IQ  KIFSKFDLKSG+ Q+KM  E   W
Sbjct: 970  GKARIVYNYKRLNDNTHDDAYNLPHKDSILNLIQNKKIFSKFDLKSGYNQIKMKEEDRPW 1029

Query: 4612 TTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSKSR*EHRG 4433
            T FTCPEG FEW V+ FGLKNAP+I QR MD +F K++ F I YIDDIL  S +  EH  
Sbjct: 1030 TAFTCPEGLFEWNVLSFGLKNAPAIFQRFMDSLFKKYE-FCIVYIDDILVASDTVQEHIK 1088

Query: 4432 HLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEFPDKLENL 4253
            HL++V       GI+I KKK  + K  I FLG+ IG G+I+LQPHI   ALE+PDK+EN 
Sbjct: 1089 HLELVFKTIKEAGIVISKKKTEIAKTYINFLGLKIGKGQIELQPHIVTKALEYPDKIENK 1148

Query: 4252 KQIQQFLGLVNYARSFIKDLGKIAGP 4175
             ++Q FLGL+NYAR FI +L K+ GP
Sbjct: 1149 NKLQSFLGLLNYARKFIPNLSKLVGP 1174



 Score =  125 bits (314), Expect(4) = e-116
 Identities = 65/144 (45%), Positives = 96/144 (66%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            L  L+LPL+  Y +IE D    GWGAILI KP+++ EK+TE+IC YASG + +  N +S+
Sbjct: 1205 LKPLELPLENYYKVIEVDSSQDGWGAILITKPNEYAEKDTEKICAYASGNF-KNNNWTSL 1263

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+  V  A+++F+L++   ++ T+RT+CE IV F    N +S++ + +RWLNF +   
Sbjct: 1264 DMEIQGVINAINTFKLYL--NKKFTLRTDCENIVKFMK--NENSRKHNSKRWLNFQNAIQ 1319

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G ++ FEHI GK N  ADILSR
Sbjct: 1320 GMGYVVKFEHISGKSNTLADILSR 1343



 Score = 46.6 bits (109), Expect(4) = e-116
 Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
 Frame = -3

Query: 5594 IDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKDLIKPNSKISFETNCGK-SI 5418
            +D GC+  +I+   +P++Y++     ++++ +  +       ++P + I F    G+ + 
Sbjct: 714  LDTGCTTSMISYALIPEKYLIPLSYQVLTRSVENKFITITQKLEPKA-IQFRDFSGRFTT 772

Query: 5417 EYFLAVEGTWVRPLRL-GVDLILGLSFLLKDNGSVMISKDFLQISKHSLLAPIYSQNEKT 5241
             Y L      V P  +   + +LGL+F+  + G ++++   + I K+    P Y   +++
Sbjct: 773  RYDLPT--IHVSPQTITSTEFLLGLNFINSNTGGILVNSTSIMIFKNIHQFPTYKYQKQS 830

Query: 5240 EAKFIDRQLKEKECNCKHERECQLIDKEIEEFQEDDGIETDLNLLDIEVLYYT------L 5079
            E           +  CK E              ED  IE D   L  +  Y+       +
Sbjct: 831  ELLAKRGGPAPLDFLCKKE--------------EDVEIENDTWQLLHQHAYFNIGKGPKI 876

Query: 5078 MSEQDIEQLISKIEKLGILGENILR 5004
            M E     ++ ++EKLG++GE++ +
Sbjct: 877  MDEVHNIPIMRELEKLGLIGEDLAK 901



 Score = 23.9 bits (50), Expect(4) = e-116
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            ++K    GQ  FN ED++LVQ
Sbjct: 1176 YSKLRKNGQIYFNNEDVRLVQ 1196



 Score = 61.2 bits (147), Expect = 5e-06
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
 Frame = -1

Query: 3205 YDERLKQEKIRFGNQELLVFPRGKMSFKEFSHITLSKEQKCILDNLWISFNKKDQKYFLA 3026
            +DE +K     FG  +L  F   K  +    H+TL   Q+ +LDN+W   N K       
Sbjct: 1430 FDEPVKL--YNFGPYQLFSFRENK--YXPPDHVTLDDNQQVLLDNIW---NCKSVFQKQK 1482

Query: 3025 CMNSLSEHFHQTKT-----HFKFYVVFKGNLPGIWIFHTWIEVLDSIKDFKNPLFKGFNN 2861
            C+ +LS++    +      +F  YVV +G+  G+++   W     +I+    P +KGF  
Sbjct: 1483 CLQALSQYMSSIQKKPASKNFSHYVVTQGSNTGVFV--KWASAKRAIEGHDWPCYKGFYT 1540

Query: 2860 LSEALDHARNFLGLNFHI 2807
            + EAL +AR  LG NF++
Sbjct: 1541 MEEALAYARERLGHNFYV 1558


>emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]
          Length = 429

 Score =  349 bits (896), Expect(4) = e-114
 Identities = 167/273 (61%), Positives = 215/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 54   KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 113

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 114  NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 173

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP+I QRK+ +IF +++ F++ YIDD+L FS+
Sbjct: 174  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPAIFQRKIQNIFNENQEFILVYIDDLLVFSR 233

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  EH  HL+I   +   +G+I+ KKKM + K++I FLG  IG+G+I LQ HIA+  L+F
Sbjct: 234  TYKEHIAHLEIFFRKVEQNGLILSKKKMEICKEKINFLGHEIGEGKIHLQEHIAKKILQF 293

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 294  PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 326



 Score = 71.2 bits (173), Expect(4) = e-114
 Identities = 34/70 (48%), Positives = 50/70 (71%)
 Frame = -3

Query: 4079 LQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSIDTE 3900
            L+LPL+  Y IIE+D    GWGAIL  +P KF+ K+ E+ICRYASG Y+ K  V++ D E
Sbjct: 360  LELPLEESYFIIETDASQHGWGAILKQRPTKFSAKSEEKICRYASGSYKLK-TVNNTDRE 418

Query: 3899 LLAVSYALDS 3870
            ++A+  A+++
Sbjct: 419  IMAIINAINA 428



 Score = 36.2 bits (82), Expect(4) = e-114
 Identities = 13/34 (38%), Positives = 26/34 (76%)
 Frame = -3

Query: 5090 YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            Y  + S++DIE++I ++E + I+GE  ++YW+K+
Sbjct: 22   YRDIKSKRDIEKIIQRLEDIQIIGEIPMKYWEKN 55



 Score = 28.1 bits (61), Expect(4) = e-114
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQR FN EDIKLV+
Sbjct: 328  YAKLRKNGQRYFNSEDIKLVR 348


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
            gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
            bacilliform virus GD1]
          Length = 1892

 Score =  261 bits (666), Expect(4) = e-101
 Identities = 129/282 (45%), Positives = 187/282 (66%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKI-NANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            + K+ C LDI NP+  +    I +   Q  E F+ HI  LL+L +IR S S H+++AFIV
Sbjct: 1313 RNKVLCYLDIKNPDMVIEDKPIKHVTPQMEESFRKHIKGLLELKVIRPSTSKHRTTAFIV 1372

Query: 4816 RKHSEI-------VRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               + +        +GK RMV NYKRLND T  D Y +P    ++ R+   KI+SKFDLK
Sbjct: 1373 NSGTSVDPVTGKETKGKERMVFNYKRLNDLTEKDQYSLPGINTIMKRVGHAKIYSKFDLK 1432

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV MHPESI+WT F  P+G +EWLVMPFGLKNAP++ QRKMD++F   + F+  YI
Sbjct: 1433 SGFHQVAMHPESIKWTAFWVPDGLYEWLVMPFGLKNAPAVFQRKMDNVFKGTEAFIAVYI 1492

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FS+S  EH  H+++++ +   +G+++   KM + ++++EFLG I+  GRI+LQPH
Sbjct: 1493 DDILVFSQSEEEHIKHIRVMLEKCRENGLVLSPTKMKIAQRKVEFLGAILEAGRIQLQPH 1552

Query: 4297 IAQMALEFPDK-LENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I +  + F D+ L+  K ++ FLGL+NYAR++I  +G++  P
Sbjct: 1553 IIKKVVNFKDEDLQETKGLRSFLGLLNYARAYIPQMGRLLSP 1594



 Score =  126 bits (316), Expect(4) = e-101
 Identities = 61/144 (42%), Positives = 96/144 (66%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LP+L+LP    ++I+E+DGC  GWG +   K  ++  KNTERIC YASGK+      S+I
Sbjct: 1625 LPDLELPPQECFIILETDGCMEGWGGVCKWKKKEYDPKNTERICAYASGKFHP--IKSTI 1682

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +L++F++  + K  +TIRT+C+AI+ F++   + + + SR RW+NF D   
Sbjct: 1683 DAEIHAVMNSLEAFKIHYLDKPSLTIRTDCQAIIAFFD--TISNHKPSRLRWINFTDYVT 1740

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G+ ++F+H+KG++N  AD LSR
Sbjct: 1741 GLGIPVNFQHVKGEDNRLADALSR 1764



 Score = 28.5 bits (62), Expect(4) = e-101
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
 Frame = -3

Query: 5180 ECQLIDKEIEEFQEDDGIETDLNLL------DIEVLYYTLMSEQDIEQLISKIEKLGILG 5019
            + +L+   +EE  EDD +E + N +       ++  Y  L S      L+ +++  G +G
Sbjct: 1247 QTRLMAPIVEEDDEDDEVEQETNWIRTMASSTMDAPYEKLRSS--FGPLMKELKDQGYIG 1304

Query: 5018 ENILRYWDKD 4989
            EN +++W ++
Sbjct: 1305 ENPMKHWARN 1314



 Score = 26.2 bits (56), Expect(4) = e-101
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK S KG++  N+ED KLV+
Sbjct: 1596 YAKVSPKGEKKLNKEDWKLVR 1616


>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1098

 Score =  350 bits (898), Expect(4) = e-100
 Identities = 166/273 (60%), Positives = 215/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 499  KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 558

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 559  NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKM 618

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP++ QRKM +IF  ++ FV+ YIDD+L FSK
Sbjct: 619  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSK 678

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  +H  HL++   +   +G+I+ KKKM ++K+++ FLG  IG+G+I LQ HIA+  L+F
Sbjct: 679  TYKDHIAHLELFFRKVEQNGLILSKKKMEIYKEKVNFLGHEIGEGKIHLQEHIAKKILQF 738

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 739  PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 771



 Score = 35.8 bits (81), Expect(4) = e-100
 Identities = 12/34 (35%), Positives = 26/34 (76%)
 Frame = -3

Query: 5090 YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            Y  + S++DIE+++ ++E + I+GE  ++YW+K+
Sbjct: 467  YRDIKSKKDIEKIVQRLEDIQIIGEIPMKYWEKN 500



 Score = 26.9 bits (58), Expect(4) = e-100
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQ+ FN EDIKLV+
Sbjct: 773  YAKLRKNGQKYFNSEDIKLVR 793



 Score = 25.4 bits (54), Expect(4) = e-100
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLG 4020
            L  L+LPL+  Y IIE+D    G
Sbjct: 802  LKPLELPLEESYFIIETDASQQG 824



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
 Frame = -1

Query: 3184 EKIRFGNQ-ELLVFPRGKMSFKEFSHITLSKEQKCILDNLWISFNKK--DQKYFLACMNS 3014
            E   FG+  +L +FP     FK   HI L + Q+CILDN W  +N K  ++ Y L+ +NS
Sbjct: 835  ECFTFGDDNKLRIFPPNSYKFKPKDHIILDEVQECILDNFWYQYNNKREEKGYLLSILNS 894

Query: 3013 LSEHF-------------HQTKTHFKFYVVFKGNLPGIWI-FHTWIEVLDSIKDFKNPLF 2876
            LSE+F             H+       YVVF G LPG++I F   +      K      +
Sbjct: 895  LSEYFHLINGSLMPANEDHEVIQQKPIYVVFDGKLPGVYISFEEIVAQKIDAKLMGGISW 954

Query: 2875 KGFNNLSEALDHARNFLGLNFHISPSLR 2792
            K + ++ EAL  AR  LG+N+++ P+ +
Sbjct: 955  KKYKDIDEALSQARKILGINYYLEPAAK 982


>gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 764

 Score =  348 bits (893), Expect(4) = e-100
 Identities = 166/273 (60%), Positives = 214/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 165  KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 224

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 225  NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 284

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP++ QRKM +IF  ++ FV+ YIDD+L FSK
Sbjct: 285  AEESIEWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSK 344

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  +H  HL++   +   +G+I+ KKKM + K+++ FLG  IG+G+I LQ HIA+  L+F
Sbjct: 345  TYKDHIAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQF 404

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 405  PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 437



 Score = 37.7 bits (86), Expect(4) = e-100
 Identities = 29/135 (21%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
 Frame = -3

Query: 5363 DLILGLSFLLKDNGSVMISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHE 5184
            D+I+GL FL +   + +I +  +    +    P  S+  K     I     E   N + E
Sbjct: 40   DMIIGLRFLQQSVQTTVIHEQGITFIPYQNNVPYISEVRKRGGARIKPDNLEA-LNLESE 98

Query: 5183 RECQLIDKEIEEFQEDDGIE------TDLNLLDIEVL----YYTLMSEQDIEQLISKIEK 5034
                   + I E++  + I+      +++  + ++      Y  + S++DIE+++ ++E 
Sbjct: 99   -------ERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRDIKSKKDIEKIVQRLED 151

Query: 5033 LGILGENILRYWDKD 4989
            + I+GE  ++YW+K+
Sbjct: 152  IQIIGEIPMKYWEKN 166



 Score = 26.9 bits (58), Expect(4) = e-100
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AK    GQ+ FN EDIKLV+
Sbjct: 439  YAKLRKNGQKYFNSEDIKLVR 459



 Score = 25.4 bits (54), Expect(4) = e-100
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLG 4020
            L  L+LPL+  Y IIE+D    G
Sbjct: 468  LKPLELPLEESYFIIETDASQQG 490



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
 Frame = -1

Query: 3184 EKIRFGNQ-ELLVFPRGKMSFKEFSHITLSKEQKCILDNLWISFNKK--DQKYFLACMNS 3014
            E   FG+  +L +FP     FK   HI L + Q+CILDN W  +N K  ++ Y L+ +NS
Sbjct: 501  ECFTFGDDNKLRIFPPNSYKFKPKDHIILDEVQECILDNFWYQYNNKREEKGYLLSILNS 560

Query: 3013 LSEHF-------------HQTKTHFKFYVVFKGNLPGIWI-FHTWIEVLDSIKDFKNPLF 2876
            LSE+F             H+       YVVF G LPG++I F   +      K      +
Sbjct: 561  LSEYFHLINGSLMPANEDHEVIQQKPIYVVFDGKLPGVYISFEEIVAQKIDAKLMGGISW 620

Query: 2875 KGFNNLSEALDHARNFLGLNFHISPSLR 2792
            K + ++ EAL  AR  LG+N+++ P+ +
Sbjct: 621  KKYKDIDEALSQARKILGINYYLEPAAK 648


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  263 bits (672), Expect(3) = 3e-99
 Identities = 137/282 (48%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKI-NANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K ++ C LDI NP+  +    + +   Q  E F+ H+  LL++G IR S S H+++A IV
Sbjct: 887  KNRVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRRHVEALLKIGAIRPSKSRHRTTAIIV 946

Query: 4816 RKHSEI-------VRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               + I       V+GK RMV NYKRLND T  D Y +P    ++ R++   IFSKFDLK
Sbjct: 947  NSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLK 1006

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV MHP+S+EWT F  P G +EWLVMPFGLKNAP++ QRKMD  F   + F+  YI
Sbjct: 1007 SGFQQVAMHPDSVEWTAFWVPSGLYEWLVMPFGLKNAPAVFQRKMDHCFKGTEAFIAVYI 1066

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FSK+  EH  HLQI++S    +G+I+   KM + + +IEFLG II +G IKLQPH
Sbjct: 1067 DDILVFSKTEKEHEEHLQIMLSICQRNGLILSPTKMKIAQAEIEFLGAIIHNGLIKLQPH 1126

Query: 4297 IAQMALEFPDK-LENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I Q  L F +K LE +K ++ +LGL+NYARS+I  +G++  P
Sbjct: 1127 IVQKLLTFTNKQLEEVKGLRSWLGLLNYARSYIPHMGRLLSP 1168



 Score =  118 bits (296), Expect(3) = 3e-99
 Identities = 60/144 (41%), Positives = 94/144 (65%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LP L+LP    ++IIE+DGC  GWG +   K  ++  +++ER+C YASGK+      S+I
Sbjct: 1199 LPALELPPADCFIIIETDGCMDGWGGVCKWKIAQYDPRSSERVCAYASGKFNPP--KSTI 1256

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +L+SF+++ + K  + +RT+C+AI++F+NK N++  + SR RW+ F D   
Sbjct: 1257 DAEIHAVMNSLNSFKIYYLDKPSLCLRTDCQAIISFFNKSNVN--KPSRVRWIAFTDFLT 1314

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G+ ++ EHI GK N  AD LSR
Sbjct: 1315 GLGIPVNIEHIDGKNNHLADALSR 1338



 Score = 33.1 bits (74), Expect(3) = 3e-99
 Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 10/213 (4%)
 Frame = -3

Query: 5597 LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKDLIKPNSKISFETNCGKSI 5418
            ++D G + C I+   VP   +          + N  V  +   I    ++  +   GK  
Sbjct: 716  ILDTGATTCCIDSRSVPKDAL----------EENSFVVNFSG-INSKQQVKQKIKAGKMF 764

Query: 5417 --EYFLAVEGTWVRPLRLG--VDLILGLSFLLKDNGSVMISKDFLQISKH------SLLA 5268
              E++  +   +   +++G  + LILG +F+    G V +  + +   K        L A
Sbjct: 765  INEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQITSINTRLAA 824

Query: 5267 PIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQEDDGIETDLNLLDIEVLY 5088
            P+  Q+E+          KE+E N +  R   LI + +    E   +             
Sbjct: 825  PLIQQDEE----------KEEELNLEEHR---LIQEMVAYSTERPFVHF----------- 860

Query: 5087 YTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
                 +Q    LI +++  G +GE  ++YW K+
Sbjct: 861  -----QQKFAGLIQELKAQGYIGEEPMKYWAKN 888


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  264 bits (674), Expect(3) = 5e-99
 Identities = 139/282 (49%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKI-NANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K K+ C LDI NP+  +    + +   Q  E F+ H+  LL++G IR S S H+++A IV
Sbjct: 1364 KNKVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIV 1423

Query: 4816 RKHSEI-------VRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               + I       V+GK RMV NYKRLND T  D Y +P    ++ R++   IFSKFDLK
Sbjct: 1424 NSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLK 1483

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV MHP+SIEWT F  P G +EWLVMPFGLKNAP++ QRKMD  F   + F+  YI
Sbjct: 1484 SGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPFGLKNAPAVFQRKMDHCFKGTEAFIAVYI 1543

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FSKS  EH  HL+I++S    +G+I+   KM + + +IEFLG II +G IKLQPH
Sbjct: 1544 DDILVFSKSEREHEEHLKIMLSICQKNGLILSPTKMKIAQVEIEFLGAIIHNGLIKLQPH 1603

Query: 4297 IAQMALEFPDK-LENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I Q  L F +K LE +K ++ +LGL+NYARS+I  +G++  P
Sbjct: 1604 IVQKLLTFTNKQLEEVKGLRSWLGLLNYARSYIPHMGRLLSP 1645



 Score =  117 bits (294), Expect(3) = 5e-99
 Identities = 59/144 (40%), Positives = 94/144 (65%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LP L+LP    ++IIE+DGC  GWG +   K  ++  +++ER+C YASGK+      S+I
Sbjct: 1676 LPALELPPADCFIIIETDGCMDGWGGVCKWKLAQYDPRSSERVCAYASGKFNPP--KSTI 1733

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +L++F+++ + K  + +RT+C+AI++F+NK N++  + SR RW+ F D   
Sbjct: 1734 DAEIHAVMNSLNNFKIYYLDKSSLCLRTDCQAIISFFNKSNVN--KPSRVRWIAFTDFLT 1791

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G+ ++ EHI GK N  AD LSR
Sbjct: 1792 GLGIPVNIEHIDGKNNHLADALSR 1815



 Score = 32.3 bits (72), Expect(3) = 5e-99
 Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 8/211 (3%)
 Frame = -3

Query: 5597 LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKDLIKPNSKISFETNCGKSI 5418
            ++D G + C I+   VP   +          + N  V  +   I    ++  +   GK  
Sbjct: 1192 ILDTGATTCCIDSRSVPKDAL----------EENSFVVNFSG-INSKQQVKQKIKAGKMF 1240

Query: 5417 --EYFLAVEGTWVRPLRLG--VDLILGLSFLLKDNGSVMISKDFLQISKHSLLAPIYSQN 5250
              E++  +   +   +++G  + LILG +F+    G V +  + +   K      I S N
Sbjct: 1241 INEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYKQ-----ITSIN 1295

Query: 5249 EKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQEDDGIETDLNLLDIEVLYYT---- 5082
             +  A  + +  +EKE                EE   D+       L+   V Y T    
Sbjct: 1296 TRLAAPLLKQDEEEKE----------------EELNLDEH-----RLIQEMVAYSTERPF 1334

Query: 5081 LMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            +  +Q    LI +++  G +GE  ++YW K+
Sbjct: 1335 VHFQQKFAGLIQELKAQGYIGEEPMKYWAKN 1365


>gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 2828

 Score =  348 bits (893), Expect(4) = 7e-99
 Identities = 166/273 (60%), Positives = 214/273 (78%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIVR 4814
            K  I CK++IINPEY ++T+ I A  +D+E+FKMHI ELL+LG IR S SPH+S+AFIVR
Sbjct: 2229 KNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVR 2288

Query: 4813 KHSEIVRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLKSGFWQVKM 4634
             H+E VRGKSRMVINYKRLNDNT  D Y+IP+K + INRIQ  K FSKFDLK+GFWQVKM
Sbjct: 2289 NHAEEVRGKSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKM 2348

Query: 4633 HPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYIDDILGFSK 4454
              ESIEWT FTCP+GH+EWLVMP GLKNAP++ QRKM +IF  ++ FV+ YIDD+L FSK
Sbjct: 2349 AEESIEWTAFTCPQGHYEWLVMPLGLKNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSK 2408

Query: 4453 SR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIAQMALEF 4274
            +  +H  HL++   +   +G+I+ KKKM + K+++ FLG  IG+G+I LQ HIA+  L+F
Sbjct: 2409 TYKDHIAHLELFFRKVEQNGLILSKKKMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQF 2468

Query: 4273 PDKLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            PD + + K++QQFLGLVNYAR+ I +L K+AGP
Sbjct: 2469 PDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 2501



 Score = 35.8 bits (81), Expect(4) = 7e-99
 Identities = 12/34 (35%), Positives = 26/34 (76%)
 Frame = -3

Query: 5090 YYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
            Y  + S++DIE+++ ++E + I+GE  ++YW+K+
Sbjct: 2197 YRDIKSKKDIEKIVQRLEDIQIIGEIPMKYWEKN 2230



 Score = 25.4 bits (54), Expect(4) = 7e-99
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            + K    GQ+ FN EDIKLV+
Sbjct: 2503 YTKLRKNGQKYFNSEDIKLVR 2523



 Score = 25.4 bits (54), Expect(4) = 7e-99
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLG 4020
            L  L+LPL+  Y IIE+D    G
Sbjct: 2532 LKPLELPLEESYFIIETDASQQG 2554



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
 Frame = -1

Query: 3184 EKIRFGNQ-ELLVFPRGKMSFKEFSHITLSKEQKCILDNLWISFNKK--DQKYFLACMNS 3014
            E   FG+  +L +FP     FK   HI L + Q+CILDN W  +N K  ++ Y L+ +NS
Sbjct: 2565 ECFTFGDDNKLRIFPPNSYKFKPKDHIILDEVQECILDNFWYQYNNKREEKGYLLSILNS 2624

Query: 3013 LSEHF-------------HQTKTHFKFYVVFKGNLPGIWI-FHTWIEVLDSIKDFKNPLF 2876
            LSE+F             H+       YVVF G LPG++I F   +      K      +
Sbjct: 2625 LSEYFHLINGSLMPANEDHEVIQQKPIYVVFDGKLPGVYISFEEIVAQKIDAKLMGGISW 2684

Query: 2875 KGFNNLSEALDHARNFLGLNFHISPSLR 2792
            K + ++ EAL  AR  LG+N+++ P+ +
Sbjct: 2685 KKYKDIDEALSQARKILGINYYLEPAAK 2712


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  263 bits (671), Expect(3) = 7e-99
 Identities = 137/282 (48%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKI-NANNQDVEDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K ++ C LDI NP+  +    + +   Q  E F+ H+  LL++G IR S S H+++A IV
Sbjct: 1365 KNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIIV 1424

Query: 4816 RKHSEI-------VRGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               + I       V+GK RMV NYKRLND T  D Y +P    ++ R++   IFSKFDLK
Sbjct: 1425 NSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLK 1484

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV MHP+S+EWT F  P G +EWLVMPFGLKNAP++ QRKMD  F   + F+  YI
Sbjct: 1485 SGFHQVAMHPDSVEWTAFWVPSGLYEWLVMPFGLKNAPAVFQRKMDHCFKGTEAFIAVYI 1544

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FSK+  EH  HLQI++S    +G+I+   KM + + +IEFLG II +G IKLQPH
Sbjct: 1545 DDILVFSKTEKEHEEHLQIMLSICQRNGLILSPTKMKIAQAEIEFLGAIIHNGLIKLQPH 1604

Query: 4297 IAQMALEFPDK-LENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I Q  L F +K LE +K ++ +LGL+NYARS+I  +G++  P
Sbjct: 1605 IVQKLLTFTNKQLEEVKGLRSWLGLLNYARSYIPHMGRLLSP 1646



 Score =  117 bits (294), Expect(3) = 7e-99
 Identities = 59/144 (40%), Positives = 94/144 (65%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LP L+LP    ++IIE+DGC  GWG +   K  ++  +++ER+C YASGK+      S+I
Sbjct: 1677 LPALELPPADCFIIIETDGCMDGWGGVCKWKIAQYDPRSSERVCAYASGKFNPP--KSTI 1734

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +L++F+++ + K  + +RT+C+AI++F+NK N++  + SR RW+ F D   
Sbjct: 1735 DAEIHAVMNSLNNFKIYYLDKSSLCLRTDCQAIISFFNKSNVN--KPSRVRWIAFTDFLT 1792

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              G+ ++ EHI GK N  AD LSR
Sbjct: 1793 GLGIPVNIEHIDGKNNHLADALSR 1816



 Score = 33.1 bits (74), Expect(3) = 7e-99
 Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 4/207 (1%)
 Frame = -3

Query: 5597 LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKDLIKPNSKISFETNCGKSI 5418
            ++D G + C I+   VP   +          + N  V  +   I    ++  +   GK  
Sbjct: 1193 ILDTGATTCCIDSRSVPKDAL----------EENSFVVNFSG-INSKQQVKQKLKAGKMF 1241

Query: 5417 --EYFLAVEGTWVRPLRLG--VDLILGLSFLLKDNGSVMISKDFLQISKHSLLAPIYSQN 5250
              E++  +   +   +++G  + LILG +F+    G V +  + +   K      I S N
Sbjct: 1242 INEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQ-----ITSIN 1296

Query: 5249 EKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQEDDGIETDLNLLDIEVLYYTLMSE 5070
             +  A  + ++ +EKE     E E +LI + +    E   ++                 +
Sbjct: 1297 TRLAAPLLKQEEEEKEEELNLE-EHRLIQEMVAYSTERPFVQF----------------Q 1339

Query: 5069 QDIEQLISKIEKLGILGENILRYWDKD 4989
            Q    LI  ++  G +GE  ++YW K+
Sbjct: 1340 QKFAGLIQDLKAQGYIGEEPMKYWAKN 1366


>gb|AHM92948.1| polyprotein [Banana streak OL virus]
          Length = 1832

 Score =  245 bits (626), Expect(4) = 2e-98
 Identities = 127/282 (45%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDV-EDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K ++ C++++ NP+  +    +      + E    H+ +LL+L +IR S S H+++A IV
Sbjct: 1220 KNQVKCRIEVKNPDMIIEDRPLKHVTPTMKETMTKHVQKLLELKVIRPSSSKHRTTAMIV 1279

Query: 4816 RKHSEIV-------RGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               +E+        RGK R+V NYKRLNDNT  D Y +P    +I RI   KI+SKFDLK
Sbjct: 1280 ESGTEVDPMTGKERRGKERLVFNYKRLNDNTEKDQYSLPGINTIIKRIGNAKIYSKFDLK 1339

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV M PESI WT F   +G +EWLVMPFGLKNAP+I QRKMD+ F   + F+  YI
Sbjct: 1340 SGFHQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEDFIAVYI 1399

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FS++  +H+ HL+  ++    +G+++   KM +  +QI+FLG  IG+ +IKLQPH
Sbjct: 1400 DDILVFSETIHQHKEHLKKFMTICEKNGLVLSPTKMKIGTRQIDFLGATIGNSKIKLQPH 1459

Query: 4297 IAQMALEFPD-KLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I +  +E  D +L+ +K ++++LG++NYARS+I  LGKI GP
Sbjct: 1460 IIKKIIEMKDEELKEVKGLRKWLGILNYARSYIPKLGKILGP 1501



 Score =  121 bits (303), Expect(4) = 2e-98
 Identities = 66/144 (45%), Positives = 91/144 (63%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LPEL+LP +   +IIE+DGC  GWG +   K      + +E+IC YASGK+      S+I
Sbjct: 1532 LPELELPPEKAIMIIETDGCMEGWGGVCKWKTDSLQPRWSEKICAYASGKFTP--IKSTI 1589

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +LD F+++ + K+E+ IRT+ +AIV+FY K +    + SR RWL F D   
Sbjct: 1590 DAEIQAVINSLDKFKIYYLDKKELIIRTDSQAIVSFYKKSS--DHKPSRVRWLAFTDYIT 1647

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              GL I FEHI GK+N+ AD LSR
Sbjct: 1648 GTGLEIKFEHIDGKDNVLADTLSR 1671



 Score = 42.0 bits (97), Expect(4) = 2e-98
 Identities = 44/229 (19%), Positives = 98/229 (42%), Gaps = 8/229 (3%)
 Frame = -3

Query: 5651 IKVRCVVRIGDYEIKCL*LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKD 5472
            + ++C + + D ++    ++D G + C+ ++  +P     +A+  II + +NG       
Sbjct: 1039 LNIKCEIEVKDKKVVLNAILDTGATVCVADERMIPSGMKEQAKNKIIIRGVNGV------ 1092

Query: 5471 LIKPNSKISFETNCGKSI--EYFLAVEGTWVRP-LRLGVDLILGLSFLLK-----DNGSV 5316
                 ++++  T+ GK    + +  +  T++ P L  GV +I+G++F+       +NG V
Sbjct: 1093 -----TEVNEVTSAGKLWVGKQWFYLPQTFIMPSLADGVHMIIGMNFIRTVGLRIENGEV 1147

Query: 5315 MISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQED 5136
             I K         ++  + +     E  +ID                  ++ E+ E+   
Sbjct: 1148 TIYK---------IMTTVQAPPIVHELNYIDE-----------------LELELHEYYNI 1181

Query: 5135 DGIETDLNLLDIEVLYYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
               E+    +  E +            +I K++KLG +GE  L++W+K+
Sbjct: 1182 CAAESSRGEISEEFIS---------PDIIGKMKKLGYIGEEPLKHWEKN 1221



 Score = 24.6 bits (52), Expect(4) = 2e-98
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AKTS  G+R  N +D K+V+
Sbjct: 1503 YAKTSPNGERRMNTQDWKIVK 1523


>gb|AFH88829.1| ORFIII [Banana streak OL virus]
          Length = 1709

 Score =  246 bits (627), Expect(4) = 2e-98
 Identities = 127/282 (45%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDV-EDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K ++ C++++ NP+  +    +      + E    H+ +LL+L +IR S S H+++A IV
Sbjct: 1220 KNQVKCRIEVKNPDMIIEDRPLKHVTPTMKETMAKHVQKLLELKVIRPSSSKHRTTAMIV 1279

Query: 4816 RKHSEIV-------RGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               +E+        RGK R+V NYKRLNDNT  D Y +P    +I RI   KI+SKFDLK
Sbjct: 1280 ESGTEVDPMTGKERRGKERLVFNYKRLNDNTEKDQYSLPGINTIIKRIGNAKIYSKFDLK 1339

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV M PESI WT F   +G +EWLVMPFGLKNAP+I QRKMD+ F   + F+  YI
Sbjct: 1340 SGFHQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEDFIAVYI 1399

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FS++  +H+ HL+  ++    +G+++   KM +  +QI+FLG  IG+ +IKLQPH
Sbjct: 1400 DDILVFSETIHQHKEHLKKFMTICEKNGLVLSPTKMKIGTRQIDFLGATIGNSKIKLQPH 1459

Query: 4297 IAQMALEFPD-KLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I +  +E  D +L+ +K ++++LG++NYARS+I  LGKI GP
Sbjct: 1460 IIKKIIEMKDEELKEVKGLRKWLGILNYARSYISKLGKILGP 1501



 Score =  121 bits (303), Expect(4) = 2e-98
 Identities = 66/144 (45%), Positives = 91/144 (63%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LPEL+LP +   +IIE+DGC  GWG +   K      + +E+IC YASGK+      S+I
Sbjct: 1532 LPELELPPEKAIMIIETDGCMEGWGGVCKWKTDSLQPRWSEKICAYASGKFTP--IKSTI 1589

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +LD F+++ + K+E+ IRT+ +AIV+FY K +    + SR RWL F D   
Sbjct: 1590 DAEIQAVINSLDKFKIYYLDKKELIIRTDSQAIVSFYKKSS--DHKPSRVRWLAFTDYIT 1647

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              GL I FEHI GK+N+ AD LSR
Sbjct: 1648 GTGLEIKFEHIDGKDNVLADTLSR 1671



 Score = 41.6 bits (96), Expect(4) = 2e-98
 Identities = 44/229 (19%), Positives = 98/229 (42%), Gaps = 8/229 (3%)
 Frame = -3

Query: 5651 IKVRCVVRIGDYEIKCL*LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKD 5472
            + ++C + + D ++    ++D G + C+ ++  +P     +A+  II + +NG       
Sbjct: 1039 LNIKCEIEVKDKKVVLNAILDTGATVCVADERMIPSGMKEQAKNRIIIRGVNGV------ 1092

Query: 5471 LIKPNSKISFETNCGKSI--EYFLAVEGTWVRP-LRLGVDLILGLSFLLK-----DNGSV 5316
                 ++++  T+ GK    + +  +  T++ P L  GV +I+G++F+       +NG V
Sbjct: 1093 -----TEVNEVTSAGKLWVGKQWFYLPQTFIMPSLADGVHMIIGMNFIRTVGLRIENGEV 1147

Query: 5315 MISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQED 5136
             I K         ++  + +     E  +ID                  ++ E+ E+   
Sbjct: 1148 TIYK---------IMTTVQAPPIVHELNYIDE-----------------LELELHEYYNI 1181

Query: 5135 DGIETDLNLLDIEVLYYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
               E+    +  E +            +I K++KLG +GE  L++W+K+
Sbjct: 1182 CAAESSRGEISEEFIS---------PDIIGKMKKLGYIGEEPLKHWEKN 1221



 Score = 24.6 bits (52), Expect(4) = 2e-98
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AKTS  G+R  N +D K+V+
Sbjct: 1503 YAKTSPNGERRMNTQDWKIVK 1523


>gb|ABI30268.1| polyprotein [Banana streak virus]
          Length = 1709

 Score =  245 bits (626), Expect(4) = 2e-98
 Identities = 127/282 (45%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDV-EDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K ++ C++++ NP+  +    +      + E    H+ +LL+L +IR S S H+++A IV
Sbjct: 1220 KNQVKCRIEVKNPDMIIEDRPLKHVTPTMKETMAKHVQKLLELKVIRPSSSKHRTTAMIV 1279

Query: 4816 RKHSEIV-------RGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               +E+        RGK R+V NYKRLNDNT  D Y +P    +I RI   KI+SKFDLK
Sbjct: 1280 ESGTEVDPMTGKERRGKERLVFNYKRLNDNTEKDQYSLPGINTIIKRIGNAKIYSKFDLK 1339

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV M PESI WT F   +G +EWLVMPFGLKNAP+I QRKMD+ F   + F+  YI
Sbjct: 1340 SGFHQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEDFIAVYI 1399

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FS++  +H+ HL+  ++    +G+++   KM +  +QI+FLG  IG+ +IKLQPH
Sbjct: 1400 DDILVFSETIHQHKEHLKKFMTICEKNGLVLSPTKMKIGTRQIDFLGATIGNSKIKLQPH 1459

Query: 4297 IAQMALEFPD-KLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I +  +E  D +L+ +K ++++LG++NYARS+I  LGKI GP
Sbjct: 1460 IIKKIIEMKDEELKEVKGLRKWLGILNYARSYIPKLGKILGP 1501



 Score =  121 bits (303), Expect(4) = 2e-98
 Identities = 66/144 (45%), Positives = 91/144 (63%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LPEL+LP +   +IIE+DGC  GWG +   K      + +E+IC YASGK+      S+I
Sbjct: 1532 LPELELPPEKAIMIIETDGCMEGWGGVCKWKTDSLQPRWSEKICAYASGKFTP--IKSTI 1589

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +LD F+++ + K+E+ IRT+ +AIV+FY K +    + SR RWL F D   
Sbjct: 1590 DAEIQAVINSLDKFKIYYLDKKELIIRTDSQAIVSFYKKSS--DHKPSRVRWLAFTDYIT 1647

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              GL I FEHI GK+N+ AD LSR
Sbjct: 1648 GTGLEIKFEHIDGKDNVLADTLSR 1671



 Score = 41.6 bits (96), Expect(4) = 2e-98
 Identities = 44/229 (19%), Positives = 98/229 (42%), Gaps = 8/229 (3%)
 Frame = -3

Query: 5651 IKVRCVVRIGDYEIKCL*LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKD 5472
            + ++C + + D ++    ++D G + C+ ++  +P     +A+  II + +NG       
Sbjct: 1039 LNIKCEIEVKDKKVVLNAILDTGATVCVADERMIPSGMKEQAKNRIIIRGVNGV------ 1092

Query: 5471 LIKPNSKISFETNCGKSI--EYFLAVEGTWVRP-LRLGVDLILGLSFLLK-----DNGSV 5316
                 ++++  T+ GK    + +  +  T++ P L  GV +I+G++F+       +NG V
Sbjct: 1093 -----TEVNEVTSAGKLWVGKQWFYLPQTFIMPSLADGVHMIIGMNFIRTVGLRIENGEV 1147

Query: 5315 MISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQED 5136
             I K         ++  + +     E  +ID                  ++ E+ E+   
Sbjct: 1148 TIYK---------IMTTVQAPPIVHELNYIDE-----------------LELELHEYYNI 1181

Query: 5135 DGIETDLNLLDIEVLYYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
               E+    +  E +            +I K++KLG +GE  L++W+K+
Sbjct: 1182 CAAESSRGEISEEFIS---------PDIIGKMKKLGYIGEEPLKHWEKN 1221



 Score = 24.6 bits (52), Expect(4) = 2e-98
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AKTS  G+R  N +D K+V+
Sbjct: 1503 YAKTSPNGERRMNTQDWKIVK 1523


>gb|ABE27943.1| ORFIII [Banana streak virus]
          Length = 1709

 Score =  245 bits (626), Expect(4) = 2e-98
 Identities = 127/282 (45%), Positives = 184/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 4993 KTKIFCKLDIINPEYKVRTAKINANNQDV-EDFKMHISELLQLGIIRRSDSPHKSSAFIV 4817
            K ++ C++++ NP+  +    +      + E    H+ +LL+L +IR S S H+++A IV
Sbjct: 1220 KNQVKCRIEVKNPDMIIEDRPLKHVTPTMKETMAKHVQKLLELKVIRPSSSKHRTTAMIV 1279

Query: 4816 RKHSEIV-------RGKSRMVINYKRLNDNTRNDGYDIPDKTQLINRIQECKIFSKFDLK 4658
               +E+        RGK R+V NYKRLNDNT  D Y +P    +I RI   KI+SKFDLK
Sbjct: 1280 ESGTEVDPMTGKERRGKERLVFNYKRLNDNTEKDQYSLPGINTIIKRIGNAKIYSKFDLK 1339

Query: 4657 SGFWQVKMHPESIEWTTFTCPEGHFEWLVMPFGLKNAPSILQRKMDDIFLKHKRFVITYI 4478
            SGF QV M PESI WT F   +G +EWLVMPFGLKNAP+I QRKMD+ F   + F+  YI
Sbjct: 1340 SGFHQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEDFIAVYI 1399

Query: 4477 DDILGFSKSR*EHRGHLQIVISEFINHGIIIRKKKMVLFKQQIEFLGVIIGDGRIKLQPH 4298
            DDIL FS++  +H+ HL+  ++    +G+++   KM +  +QI+FLG  IG+ +IKLQPH
Sbjct: 1400 DDILVFSETIHQHKEHLKKFMTICEKNGLVLSPTKMKIGTRQIDFLGATIGNSKIKLQPH 1459

Query: 4297 IAQMALEFPD-KLENLKQIQQFLGLVNYARSFIKDLGKIAGP 4175
            I +  +E  D +L+ +K ++++LG++NYARS+I  LGKI GP
Sbjct: 1460 IIKKIIEMKDEELKEVKGLRKWLGILNYARSYIPKLGKILGP 1501



 Score =  121 bits (303), Expect(4) = 2e-98
 Identities = 66/144 (45%), Positives = 91/144 (63%)
 Frame = -3

Query: 4088 LPELQLPLDTDYLIIESDGCDLGWGAILIAKPHKFTEKNTERICRYASGKYQEKGNVSSI 3909
            LPEL+LP +   +IIE+DGC  GWG +   K      + +E+IC YASGK+      S+I
Sbjct: 1532 LPELELPPEKAIMIIETDGCMEGWGGVCKWKTDSLQPRWSEKICAYASGKFTP--IKSTI 1589

Query: 3908 DTELLAVSYALDSFELFIISKEEITIRTNCEAIVTFYNKMNLDSKRSSRRRWLNFIDRCI 3729
            D E+ AV  +LD F+++ + K+E+ IRT+ +AIV+FY K +    + SR RWL F D   
Sbjct: 1590 DAEIQAVINSLDKFKIYYLDKKELIIRTDSQAIVSFYKKSS--DHKPSRVRWLAFTDYIT 1647

Query: 3728 QKGLIIHFEHIKGKENIAADILSR 3657
              GL I FEHI GK+N+ AD LSR
Sbjct: 1648 GTGLEIKFEHIDGKDNVLADTLSR 1671



 Score = 41.6 bits (96), Expect(4) = 2e-98
 Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
 Frame = -3

Query: 5651 IKVRCVVRIGDYEIKCL*LIDIGCSNCIINKIHVPDRYIVKAQEPIISQQMNGEVFRYKD 5472
            + ++C + + D ++    ++D G + C+ ++  +P     +A+  II + +NG       
Sbjct: 1039 LNIKCEIEVKDKKVVLNAILDTGATVCVADERMIPSGMKEQAKNRIIIRGVNGV------ 1092

Query: 5471 LIKPNSKISFETNCGK---SIEYFLAVEGTWVRPLRLGVDLILGLSFLLK-----DNGSV 5316
                 ++++  T+ GK     ++F   +   +  L  GV +I+G++F+       +NG V
Sbjct: 1093 -----TEVNEVTSAGKLWVGRQWFYLPQTFIMPSLADGVHMIIGMNFIRTVGLRIENGEV 1147

Query: 5315 MISKDFLQISKHSLLAPIYSQNEKTEAKFIDRQLKEKECNCKHERECQLIDKEIEEFQED 5136
             I K         ++  + +     E  +ID                  ++ E+ E+   
Sbjct: 1148 TIYK---------IMTTVQAPPIVHELNYIDE-----------------LELELHEYYNI 1181

Query: 5135 DGIETDLNLLDIEVLYYTLMSEQDIEQLISKIEKLGILGENILRYWDKD 4989
               E+    +  E +            +I K++KLG +GE  L++W+K+
Sbjct: 1182 CAAESSRGEISEEFIS---------PDIIGKMKKLGYIGEEPLKHWEKN 1221



 Score = 24.6 bits (52), Expect(4) = 2e-98
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 4176 HAKTSIKGQRNFNQEDIKLVQ 4114
            +AKTS  G+R  N +D K+V+
Sbjct: 1503 YAKTSPNGERRMNTQDWKIVK 1523