BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00002251
         (1422 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   320   1e-84
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   317   6e-84
ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun...   301   5e-79
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   301   6e-79
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   300   1e-78
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp...   300   1e-78
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   298   4e-78
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab...   296   2e-77
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    295   3e-77
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr...   294   6e-77
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   294   7e-77
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]           293   2e-76
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...   293   2e-76
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr...   290   8e-76
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   289   2e-75
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr...   289   2e-75
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr...   289   2e-75
ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp...   288   3e-75
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr...   288   5e-75
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   287   7e-75

>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  320 bits (820), Expect = 1e-84
 Identities = 177/268 (66%), Positives = 197/268 (73%), Gaps = 9/268 (3%)
 Frame = +3

Query: 159 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PKTLA   S+  S SL       KL   PIS S                 FVRNVAV+SE
Sbjct: 16  PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74

Query: 318 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           F+Q+E++ +D    NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75  FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE 677
           RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN                   G+   S 
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194

Query: 678 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 851
             NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254

Query: 852 IESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           I+SLNGVDL GR+IRVS AEA+P RRQF
Sbjct: 255 IDSLNGVDLAGRAIRVSVAEARPQRRQF 282


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  317 bits (813), Expect = 6e-84
 Identities = 178/280 (63%), Positives = 200/280 (71%), Gaps = 21/280 (7%)
 Frame = +3

Query: 159 PKTLALSTSQTPSL--------SLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTS 314
           PKTLA+S   + S         SLKLH N IS S                 FVRNVAV+S
Sbjct: 15  PKTLAISKPTSVSFFSLPFSCSSLKLHSNSISLS-----PSSRGFLTLSSRFVRNVAVSS 69

Query: 315 EFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGR 494
           ++EQDE+V +D  + +FSP+LKLFVGNLPFNVDSA LAGLFEQAGNVEMVEVIYDKITGR
Sbjct: 70  DYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGR 129

Query: 495 SRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN-------------XXXXXXXXXXXX 635
           SRGFGFVTMST+EEVEAAAQQFNGYEL+GR LRVN                         
Sbjct: 130 SRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENT 189

Query: 636 XXXXXXXGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGF 815
                  G+N +S NR+YVGNLSWGVDDLALETLF EQGKV +A+V+YDRE+GRSRGFGF
Sbjct: 190 NFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGF 249

Query: 816 VTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           VTY SAEEVN AIESL+GVDL GRSIRV+ AEA+ PRRQF
Sbjct: 250 VTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR-PRRQF 288


>ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
           gi|462401286|gb|EMJ06843.1| hypothetical protein
           PRUPE_ppa009295mg [Prunus persica]
          Length = 298

 Score =  301 bits (771), Expect = 5e-79
 Identities = 168/267 (62%), Positives = 195/267 (73%), Gaps = 8/267 (2%)
 Frame = +3

Query: 159 PKTLALSTSQTPSL--------SLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTS 314
           PKTLAL T +  S+        SL L   PIS S                 FVRNVAV+S
Sbjct: 37  PKTLALYTPKPTSVPFYSVSSSSLTLGCKPISIS--ASFLNSGRFQSASSRFVRNVAVSS 94

Query: 315 EFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGR 494
           EFEQDEEV +D  + +F+P+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK TGR
Sbjct: 95  EFEQDEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGR 154

Query: 495 SRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDS 674
           SRGFGFVTMS+++E E AA+Q NGYELDGR LRVN                   GS  DS
Sbjct: 155 SRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGS--DS 212

Query: 675 ENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAI 854
            NR+YVGNL+WGVD+LALE LF EQGKV++AKVVYDR+SGRSRGFGFVTYG+A+E+N+A+
Sbjct: 213 SNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAM 272

Query: 855 ESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           ESL+GVDL GRSIRV+AAE + PRRQF
Sbjct: 273 ESLDGVDLNGRSIRVTAAEPR-PRRQF 298


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  301 bits (770), Expect = 6e-79
 Identities = 167/266 (62%), Positives = 191/266 (71%), Gaps = 7/266 (2%)
 Frame = +3

Query: 159 PKTLALSTSQTP-SLSLKLHPNPIS---TSHPXXXXXXXXXXXXXXXFVRNVAVTSEFEQ 326
           PKTL+L     P SLS KLH  PIS   +                  FV +VA++SEF Q
Sbjct: 16  PKTLSLCNPNKPISLSFKLHAKPISIPSSLFSSFVPLQQQPYSSSSRFVPSVAISSEFGQ 75

Query: 327 DEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGF 506
           +E+VS+D  + +FS +LKLFVGNLPFNVDSA LAGLFE AGNVEMVEVIYDK+TGRSRGF
Sbjct: 76  EEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGF 135

Query: 507 GFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE--- 677
           GFVTMS+I+EVEAAAQQFNGYEL+GR LRVN                   G         
Sbjct: 136 GFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEG 195

Query: 678 NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAIE 857
           NR+YVGNLSW VD+LALE+ F EQGKV+DAKVVYDRESGRSRGFGFVTY SAEEV NAI+
Sbjct: 196 NRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAID 255

Query: 858 SLNGVDLEGRSIRVSAAEAKPPRRQF 935
           SLNG +L+GR+IRVS AEA+ PRRQF
Sbjct: 256 SLNGAELDGRAIRVSVAEAR-PRRQF 280


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  300 bits (767), Expect = 1e-78
 Identities = 169/266 (63%), Positives = 193/266 (72%), Gaps = 7/266 (2%)
 Frame = +3

Query: 159 PKTLALS--TSQTPSLSL-KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSEFEQD 329
           P+TL L   TSQT SLS   L P+ ++ S                 FVR V + S+F+Q 
Sbjct: 15  PQTLPLPKPTSQTTSLSFFSLPPSSLNLS------LSSSSSCFSSRFVRKVTL-SDFDQI 67

Query: 330 EEVSND----RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           E+V +       ++NFSP+LK+FVGNLPF+ DSA LA LFE+AGNVEMVEVIYDK+TGRS
Sbjct: 68  EDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRS 127

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE 677
           RGFGFVTMS+ EEVEAA QQFNGYELDGR LRVN                   G +FDS 
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSS 187

Query: 678 NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAIE 857
           NRVYVGNL+WGVD  ALETLF EQGKV+DAKVVYDR+SGRSRGFGFVTY SAEEVNNAIE
Sbjct: 188 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 247

Query: 858 SLNGVDLEGRSIRVSAAEAKPPRRQF 935
           SL+GVDL GR+IRVS AEA+PPRRQF
Sbjct: 248 SLDGVDLNGRAIRVSPAEARPPRRQF 273


>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 273

 Score =  300 bits (767), Expect = 1e-78
 Identities = 156/216 (72%), Positives = 179/216 (82%)
 Frame = +3

Query: 288 FVRNVAVTSEFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVE 467
           F++NVA++SEF Q+E+  +D  +Q+FS +LKLFVGNLPFNVDSA LAGLFE AGNVEMVE
Sbjct: 61  FLKNVAISSEFGQEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVE 120

Query: 468 VIYDKITGRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXX 647
           VIYDK+TGRSRGFGFVTM+TIEEVEAA++QFNGYELDGR LRVN                
Sbjct: 121 VIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVN--FGPPPQKESSFSRG 178

Query: 648 XXXGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYG 827
              G  FDS NRVYVGNLSW VD+LALETLF E+G+VMDAKVVYDR+SGRSRGFGFVTY 
Sbjct: 179 PRGGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYS 238

Query: 828 SAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           SAEEV+NAI+SLNG +L+GR+IRVS AEAK PRRQF
Sbjct: 239 SAEEVDNAIDSLNGAELDGRAIRVSVAEAK-PRRQF 273


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score =  298 bits (763), Expect = 4e-78
 Identities = 172/271 (63%), Positives = 194/271 (71%), Gaps = 12/271 (4%)
 Frame = +3

Query: 159 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PKTLAL + +  S+SL        L P  IS S                 FVR+VAV S+
Sbjct: 15  PKTLALYSPKPTSVSLFSLSSFSSLKPISISASF-------LSSGKASRSFVRHVAV-SD 66

Query: 318 FEQDEEV-SNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGR 494
           FEQDEEV S D  + NFSP+LKLFVGNLPF VDSA LA LFE AGNVEMVEVIYDK TGR
Sbjct: 67  FEQDEEVLSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGR 126

Query: 495 SRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN----XXXXXXXXXXXXXXXXXXXGS 662
           SRGFGFVTMS+ +EVEAAA+QFNGYELDGR LRVN                       G 
Sbjct: 127 SRGFGFVTMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPRGGGG 186

Query: 663 NFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEV 842
             DS NR+YVGNL+WGVD+LALE LF EQGKV++AKVV+DR+SGRSRGFGFVTYGSAEE+
Sbjct: 187 YGDSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEM 246

Query: 843 NNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           N+AIESL+GVDL GRSIRV+AAE +PPRRQF
Sbjct: 247 NSAIESLDGVDLGGRSIRVTAAEPRPPRRQF 277


>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
           lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
           ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score =  296 bits (757), Expect = 2e-77
 Identities = 166/281 (59%), Positives = 192/281 (68%), Gaps = 22/281 (7%)
 Frame = +3

Query: 159 PKTLALSTSQT-------PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PK+L    S+        PSLS KL+ + +S S                 FVRNVA+TSE
Sbjct: 15  PKSLPFCVSRPASVSLLPPSLSFKLNSDSVSFS------IAAKWNSPASRFVRNVAITSE 68

Query: 318 FEQDEEVSNDR---RQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 488
           FE +E+   D    +QQ+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDK+T
Sbjct: 69  FEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVT 128

Query: 489 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN------------XXXXXXXXXXX 632
           GRSRGFGFVTMS++ EVEAAA QFNGYELDGRPLRVN                       
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188

Query: 633 XXXXXXXXGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFG 812
                   GS   S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFG 248

Query: 813 FVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           FVTY S++EV NAI SLNG DL+GR IRVS AEA+PPRRQF
Sbjct: 249 FVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 289


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  295 bits (756), Expect = 3e-77
 Identities = 165/281 (58%), Positives = 195/281 (69%), Gaps = 22/281 (7%)
 Frame = +3

Query: 159 PKTLALSTSQ-------TPSLSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PK+L    S+       +PSLS KL+ + +S S                 FVRNVA+TSE
Sbjct: 15  PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFS------IAAKWNSPASRFVRNVAITSE 68

Query: 318 FEQDEEVSND---RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 488
           FE +E+   D    ++Q+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDKIT
Sbjct: 69  FEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKIT 128

Query: 489 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN------------XXXXXXXXXXX 632
           GRSRGFGFVTMS++ EVEAAAQQFNGYELDGRPLRVN                       
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188

Query: 633 XXXXXXXXGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFG 812
                   GS   S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFG 248

Query: 813 FVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           FVTY S++EV NAI+SL+G DL+GR IRVS AEA+PPRRQ+
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289


>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530825|gb|ESR42008.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 271

 Score =  294 bits (753), Expect = 6e-77
 Identities = 168/268 (62%), Positives = 186/268 (69%), Gaps = 9/268 (3%)
 Frame = +3

Query: 159 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PKTLA   S+  S SL       KL   PIS S                 FVRNVAV+SE
Sbjct: 16  PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74

Query: 318 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           F+Q+E++ +D    NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75  FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE 677
           RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN                   G+   S 
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194

Query: 678 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 851
             NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEE    
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEE---- 250

Query: 852 IESLNGVDLEGRSIRVSAAEAKPPRRQF 935
                  DL GR+IRVS AEA+P RRQF
Sbjct: 251 -------DLAGRAIRVSVAEARPQRRQF 271


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  294 bits (752), Expect = 7e-77
 Identities = 164/281 (58%), Positives = 194/281 (69%), Gaps = 22/281 (7%)
 Frame = +3

Query: 159 PKTLALSTSQ-------TPSLSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PK+L    S+       +PSLS KL+ + +S S                 F RNVA+TSE
Sbjct: 15  PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFS------IAAKWNSPASRFARNVAITSE 68

Query: 318 FEQDEEVSND---RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 488
           FE +E+   D    ++Q+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDKIT
Sbjct: 69  FEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKIT 128

Query: 489 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN------------XXXXXXXXXXX 632
           GRSRGFGFVTMS++ EVEAAAQQFNGYELDGRPLRVN                       
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188

Query: 633 XXXXXXXXGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFG 812
                   GS   S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFG 248

Query: 813 FVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           FVTY S++EV NAI+SL+G DL+GR IRVS AEA+PPRRQ+
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289


>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
          Length = 296

 Score =  293 bits (749), Expect = 2e-76
 Identities = 163/272 (59%), Positives = 195/272 (71%), Gaps = 13/272 (4%)
 Frame = +3

Query: 159 PKTLALSTSQTPS---LSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSEFEQD 329
           P +L+LS+  +PS    SLKL+   ++                   FV  VAV+SEF+QD
Sbjct: 26  PTSLSLSSLYSPSSSFASLKLYAGNVNVVCVSARGFRGLSSSSPCRFVPKVAVSSEFDQD 85

Query: 330 EEVSNDRRQQ-NFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGF 506
           E+V +D  ++  FSP+LKLFVGNLPF+VDSA LAGLFE+ GNVEMVEVIYDK TGRSRGF
Sbjct: 86  EDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRGF 145

Query: 507 GFVTMSTIEEVEAAAQQFNGYELDGRPLRVN---------XXXXXXXXXXXXXXXXXXXG 659
           GFVTMS+I+EVEAAAQQFNGYEL+GRPLRVN                            G
Sbjct: 146 GFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGGGGGGGGGGGG 205

Query: 660 SNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEE 839
           + +++ NRVYVGNLSWGVD+ ALE+LF EQGKV++AKVVYDR+SGRSRGFGFVTY +A+E
Sbjct: 206 AGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYNTADE 265

Query: 840 VNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           VN+AI SLNGVDL GRSIRV+ AEAK PRR F
Sbjct: 266 VNSAINSLNGVDLNGRSIRVTHAEAK-PRRSF 296


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score =  293 bits (749), Expect = 2e-76
 Identities = 166/277 (59%), Positives = 192/277 (69%), Gaps = 18/277 (6%)
 Frame = +3

Query: 159 PKTLALSTSQT-------PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PK+L    S+        PSLS KL+ + +S S                 FVRNVA TSE
Sbjct: 15  PKSLPFCVSRPASVSLLPPSLSFKLNSDSVSVS------IAAKWSSPASRFVRNVA-TSE 67

Query: 318 FEQDEEVSNDR---RQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 488
           FE +E+  +D    ++Q+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDK+T
Sbjct: 68  FEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVT 127

Query: 489 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXX---- 656
           GRSRGFGFVTMS+  EVEAAAQQFNGYELDGRPLRVN                       
Sbjct: 128 GRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGS 187

Query: 657 ----GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTY 824
               GS   S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFGFVTY
Sbjct: 188 GYGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTY 247

Query: 825 GSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
            S++EV NAI SLNG DL+GR IRVS AEA+PPRRQF
Sbjct: 248 NSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 284


>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530827|gb|ESR42010.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 266

 Score =  290 bits (743), Expect = 8e-76
 Identities = 163/252 (64%), Positives = 181/252 (71%), Gaps = 9/252 (3%)
 Frame = +3

Query: 159 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PKTLA   S+  S SL       KL   PIS S                 FVRNVAV+SE
Sbjct: 16  PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74

Query: 318 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           F+Q+E++ +D    NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75  FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE 677
           RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN                   G+   S 
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194

Query: 678 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 851
             NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254

Query: 852 IESLNGVDLEGR 887
           I+SLNGV   GR
Sbjct: 255 IDSLNGVVRFGR 266



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 53/126 (42%), Positives = 73/126 (57%)
 Frame = +3

Query: 657  GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAE 836
            GSNF  + +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT  S E
Sbjct: 87   GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 837  EVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKENMGTCSSLHDCIWMCCLS 1016
            EV  A +  NG +LEGR +RV++    PPRR+       +    G  SS  + +++  LS
Sbjct: 147  EVEAAAQQFNGYELEGRPLRVNSG-PPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLS 205

Query: 1017 SSTDDL 1034
               DDL
Sbjct: 206  WGVDDL 211


>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
           X2 [Solanum tuberosum]
          Length = 291

 Score =  289 bits (740), Expect = 2e-75
 Identities = 161/260 (61%), Positives = 184/260 (70%), Gaps = 12/260 (4%)
 Frame = +3

Query: 192 PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSEFEQ-DEEVSNDRRQQNFS 368
           PS SL L    +S+S P               FVRNVA+ SEF+Q +++V     + NFS
Sbjct: 36  PSSSLNLS---LSSSTPSSSIKPFESSSFGSRFVRNVAL-SEFDQLEDDVGEVEEEPNFS 91

Query: 369 PELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTIEEVEAA 548
           P+LKLFVGNLPF+VDSA LA LFE+AGNVEMVEVIYDK+TGRSRGFGFVTMS+  EVEAA
Sbjct: 92  PDLKLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAA 151

Query: 549 AQQFNGYELDGRPLRVN-----------XXXXXXXXXXXXXXXXXXXGSNFDSENRVYVG 695
            QQFNGYE+DGR LRVN                              G NFDS NRVYVG
Sbjct: 152 EQQFNGYEIDGRALRVNSGPAPEKRENSFGGGRGGRSENSSYGGARGGRNFDSSNRVYVG 211

Query: 696 NLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAIESLNGVD 875
           NLSWGVDDL+L  LF +QGKV+D KVVYDR+SGRSRGFGFVT+ SA+EVN AI+SLNG D
Sbjct: 212 NLSWGVDDLSLRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFD 271

Query: 876 LEGRSIRVSAAEAKPPRRQF 935
           L+GRSIRVSAAE +PPRRQF
Sbjct: 272 LDGRSIRVSAAEERPPRRQF 291


>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530824|gb|ESR42007.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 297

 Score =  289 bits (740), Expect = 2e-75
 Identities = 161/247 (65%), Positives = 179/247 (72%), Gaps = 9/247 (3%)
 Frame = +3

Query: 159 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PKTLA   S+  S SL       KL   PIS S                 FVRNVAV+SE
Sbjct: 16  PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74

Query: 318 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           F+Q+E++ +D    NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75  FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE 677
           RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN                   G+   S 
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194

Query: 678 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 851
             NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254

Query: 852 IESLNGV 872
           I+SLNGV
Sbjct: 255 IDSLNGV 261



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 53/126 (42%), Positives = 73/126 (57%)
 Frame = +3

Query: 657  GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAE 836
            GSNF  + +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT  S E
Sbjct: 87   GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 837  EVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKENMGTCSSLHDCIWMCCLS 1016
            EV  A +  NG +LEGR +RV++    PPRR+       +    G  SS  + +++  LS
Sbjct: 147  EVEAAAQQFNGYELEGRPLRVNSG-PPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLS 205

Query: 1017 SSTDDL 1034
               DDL
Sbjct: 206  WGVDDL 211


>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
           gi|557112071|gb|ESQ52355.1| hypothetical protein
           EUTSA_v10017023mg [Eutrema salsugineum]
          Length = 292

 Score =  289 bits (739), Expect = 2e-75
 Identities = 164/280 (58%), Positives = 191/280 (68%), Gaps = 21/280 (7%)
 Frame = +3

Query: 159 PKTLALSTSQT-------PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PK+L    S+        PS+S KL+   +S S                 FVRNVAVT +
Sbjct: 15  PKSLPFCVSRPASASLLPPSVSFKLNSESVSVS--IFASSAAKWSSAASRFVRNVAVTED 72

Query: 318 FEQDEE--VSNDR--RQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKI 485
           FE +E+   ++D   R+Q+FS +LKLFVGNLPF+VDSA LA LFE AG VE+VEVIYDKI
Sbjct: 73  FEVEEDGIFADDAAPREQSFSADLKLFVGNLPFDVDSARLAQLFESAGTVEIVEVIYDKI 132

Query: 486 TGRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXX--- 656
           TGRSRGFGFVTMS+  EVEAAAQQFNGYELDGRPLRVN                      
Sbjct: 133 TGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 192

Query: 657 -------GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGF 815
                  GS   S NRVYVGNLSWGVDD+ALE LFGEQGKV++A+V+YDR+SGRS+GFGF
Sbjct: 193 SGSGYGGGSGAGSGNRVYVGNLSWGVDDMALENLFGEQGKVVEARVIYDRDSGRSKGFGF 252

Query: 816 VTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           VTY SA+EV NAI +LNG DL+GR IRVS AEA+PPRRQF
Sbjct: 253 VTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPRRQF 292


>ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 286

 Score =  288 bits (738), Expect = 3e-75
 Identities = 149/224 (66%), Positives = 174/224 (77%), Gaps = 10/224 (4%)
 Frame = +3

Query: 288 FVRNVAVTSEFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVE 467
           F+++VA++SEF Q+E+V  D  + +FSP+L+LFVGNLPFNV+SA LA LF+ AGNVEMVE
Sbjct: 62  FLKSVAISSEFGQEEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVE 121

Query: 468 VIYDKITGRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN----------XXXXXX 617
           V YDK+TGRSRGFGFVTMSTIEEVEAA+QQFNGYELDGRPLRVN                
Sbjct: 122 VKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQ 181

Query: 618 XXXXXXXXXXXXXGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGR 797
                        G  FDS NRVYVGNLSW VDD ALE+LF E+GKVMDAKVVYDR+SGR
Sbjct: 182 RENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGR 241

Query: 798 SRGFGFVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRR 929
           S+GFGFVTY SAEEV +A++SLNG +L+GR+IRVS AEAKP RR
Sbjct: 242 SKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRR 285



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 41/101 (40%), Positives = 61/101 (60%)
 Frame = +3

Query: 663 NFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEV 842
           +F  + +++VGNL + V+   L  LF   G V   +V YD+ +GRSRGFGFVT  + EEV
Sbjct: 86  SFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEV 145

Query: 843 NNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKEN 965
             A +  NG +L+GR +RV++    PP+R+       Q+EN
Sbjct: 146 EAASQQFNGYELDGRPLRVNS--GPPPQRETSFSRLPQREN 184


>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530826|gb|ESR42009.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 263

 Score =  288 bits (736), Expect = 5e-75
 Identities = 160/246 (65%), Positives = 178/246 (72%), Gaps = 9/246 (3%)
 Frame = +3

Query: 159 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSE 317
           PKTLA   S+  S SL       KL   PIS S                 FVRNVAV+SE
Sbjct: 16  PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74

Query: 318 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           F+Q+E++ +D    NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75  FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXXGSNFDSE 677
           RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN                   G+   S 
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194

Query: 678 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 851
             NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254

Query: 852 IESLNG 869
           I+SLNG
Sbjct: 255 IDSLNG 260



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 53/126 (42%), Positives = 73/126 (57%)
 Frame = +3

Query: 657  GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAE 836
            GSNF  + +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT  S E
Sbjct: 87   GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 837  EVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKENMGTCSSLHDCIWMCCLS 1016
            EV  A +  NG +LEGR +RV++    PPRR+       +    G  SS  + +++  LS
Sbjct: 147  EVEAAAQQFNGYELEGRPLRVNSG-PPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLS 205

Query: 1017 SSTDDL 1034
               DDL
Sbjct: 206  WGVDDL 211



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = +3

Query: 378 KLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTIEEVEAAAQQ 557
           +++VGNL + VD   L  LF + G V   +V+YD+ +GRSRGFGFVT S+ EEV+ A   
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDS 257

Query: 558 FNGY 569
            NG+
Sbjct: 258 LNGF 261


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  287 bits (735), Expect = 7e-75
 Identities = 167/272 (61%), Positives = 191/272 (70%), Gaps = 13/272 (4%)
 Frame = +3

Query: 159 PKTLALS--TSQTPSLSL-KLHPNPISTSHPXXXXXXXXXXXXXXXFVRNVAVTSEFEQD 329
           P+TL L   TSQT SLS   L P+ ++ S                 FVR V +  +F+Q 
Sbjct: 15  PQTLLLPKPTSQTTSLSFFSLPPSSLNLS------LSSPSSCFSSRFVRKVTLP-DFDQI 67

Query: 330 EEVSND----RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 497
           E+V +       ++NFSP+LK+FVGNL F+ DSA LA LFE+AGNVEMVEVIYDK+TGRS
Sbjct: 68  EDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRS 127

Query: 498 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXX------G 659
           RGFGFVTMS+ EEVEAA QQFNGYELDGR LRVN                         G
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGG 187

Query: 660 SNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEE 839
            +FDS NRVYVGNL+WGVD  ALETLF EQGKV+DAKVVYDR+SGRSRGFGFVTY SAEE
Sbjct: 188 GSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 247

Query: 840 VNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 935
           VNNAIESL+GVDL GR+IRVS AEA+PPRRQF
Sbjct: 248 VNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279