BLASTX nr result
ID: Paeonia24_contig00002206
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia24_contig00002206 (5052 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0 ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2826 0.0 ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 2821 0.0 ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2816 0.0 ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2816 0.0 ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 2811 0.0 ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 2810 0.0 ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 2805 0.0 ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas... 2805 0.0 ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr... 2800 0.0 ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 2799 0.0 ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 2799 0.0 ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 2799 0.0 ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su... 2799 0.0 ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 2799 0.0 ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su... 2795 0.0 ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun... 2793 0.0 gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus... 2793 0.0 ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2792 0.0 ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2791 0.0 >ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis vinifera] Length = 1848 Score = 2895 bits (7506), Expect = 0.0 Identities = 1425/1535 (92%), Positives = 1484/1535 (96%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+DHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK AQK++NPK RLK+ILDACKNK+KCEGGDEIE Q DS+EPVKK+RGGCGAQQPKLTI Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK+QRKK+DD EQLPEPVERKQQLSAERVL+VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+RTSAWHSESETGF+TPGDTQVRIE+GE++ GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETISKAKNEVKELIRAAQE+QL Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKKGEF++V+ YE DDENWNPSY+LPEHV+DL+ IREFRNVFDAE++KLE DR Q Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TTGD+ WPMPVNLKRLIWNAQKTFK+DLRRPS MHPMEIVEAVDKLQERLKVV Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +S EAQKNATLFFNILLRST ASKRVLKEYRLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE+ Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD+ EGF P Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 EVEWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDCALYLND+ML+HAI+LQLPSYMEGLDFGMTPSRSPI GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSPNY+LSPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535 >ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica] gi|462398589|gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica] Length = 1844 Score = 2826 bits (7325), Expect = 0.0 Identities = 1391/1535 (90%), Positives = 1461/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVVQIEH ET GKPK AGLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A ++K+PK RLK+ILDACKNKTKC+GGDEI+ QG++SEEPVKK+RGGCGAQQPKL+I Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKM AEYK QRKKSDDQEQLPEPVERKQ L+AERVLSVLKRISDED LLGLNPKYAR Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RTSAWHSE+E+G +TPGDT VRIE+GE++ GTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISKAKNEVK+LI AQ KQL Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + YE DDENWNP Y+L EHV+DL+ IREFRNVFDAE++KLE DRLQ Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TGD+ WP+PVNLKRLIWNAQKTFKID RR S MHPMEIVEA+DKLQERLKVV Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +S EAQKNATLFF+ILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFV SYYEMPDEE+ Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +PDKISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD +EGF Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE++E+LGIEAVR+SLLDELRVVISFDG Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDCALYLND+ML++AI+LQLPSYM+GLDFGMTPSRSP+ GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y +GMMSPNY+LSPNLRLSP +DAQFSPYVGGMAF Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria vesca subsp. vesca] Length = 1842 Score = 2821 bits (7314), Expect = 0.0 Identities = 1385/1535 (90%), Positives = 1459/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSP EVAKVR VQFGI+SPDEIRQMSVVQIEH ET GKPK AGLSDPRLGTI Sbjct: 1 MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A ++KNPK RLK+ILDACKNKTKCEGGDEI+ Q D++EP+KK+RGGCGAQQPKLTI Sbjct: 121 FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQ--DTDEPLKKSRGGCGAQQPKLTI 178 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 +GMKM+AEYK QRKKSDDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYAR Sbjct: 179 DGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 238 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 239 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 298 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 299 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 358 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 359 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 418 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 419 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 478 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 479 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 538 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 539 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 598 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RTSAWHSESETG +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 599 LQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 658 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISKAKNEVKELI AQ K L Sbjct: 659 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSL 718 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 719 EPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 778 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 779 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 838 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+ Sbjct: 839 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 898 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + Y FDDENWNP Y+LPEHV+DL+ IREFRNVFDAE+ KLE DRLQ Sbjct: 899 LDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQ 958 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TGD+ WP+PVNLKRLIWNAQKTFKID RR S MHPMEIVEA+DKLQERL+VV Sbjct: 959 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVP 1018 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +S EAQKNATLFFNILLRST ASKRVL+EYRLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1019 GDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPG 1078 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK Sbjct: 1079 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1138 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEED+DFV+SYYEMPDEE+ Sbjct: 1139 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEV 1198 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +PDKISPWLLR+ELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIRIM Sbjct: 1199 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIM 1258 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 N+E PKG+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD +EGF Sbjct: 1259 NEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1318 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE++EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1319 EQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1378 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA+V+AETDH Sbjct: 1379 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAETDH 1438 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDCALYLND+ML++AI+LQLPSY++GLDFGMTPSRSP+ GTP Sbjct: 1439 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYVDGLDFGMTPSRSPVSGTP 1498 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 +RDGMMSPNY+LSPN+R+SP +DAQFSPYVGGMAF Sbjct: 1499 FRDGMMSPNYLLSPNMRMSPISDAQFSPYVGGMAF 1533 >ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1853 Score = 2816 bits (7301), Expect = 0.0 Identities = 1383/1535 (90%), Positives = 1464/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+AGLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D K Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A ++KNPK RL++ILDACKNKTKCEGGDEI+ QG+DS++PVKK+RGGCGAQQPK++I Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKM AEYK QRKK+DD EQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYAR Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RTSAWHSESETG +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETIS AKNEVK LI+ AQE+ L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMMDSFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF +++ YEF+DENW P+Y+LPEHV+DL+ IREFRNVF+AE++KLE DR Q Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TTG++ WPMPVNLKRLI NAQKTFKID RR S MHPMEIVEA+DKLQERLKVV Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PE NKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +FD++EGF P Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E+EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSY++GLDFGMTPSRSPI GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y +GMMSPNY+LSPNLRLSP +DAQFSPYVGGMAF Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1832 Score = 2816 bits (7301), Expect = 0.0 Identities = 1383/1535 (90%), Positives = 1464/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+AGLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D K Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A ++KNPK RL++ILDACKNKTKCEGGDEI+ QG+DS++PVKK+RGGCGAQQPK++I Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKM AEYK QRKK+DD EQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYAR Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RTSAWHSESETG +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETIS AKNEVK LI+ AQE+ L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMMDSFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF +++ YEF+DENW P+Y+LPEHV+DL+ IREFRNVF+AE++KLE DR Q Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TTG++ WPMPVNLKRLI NAQKTFKID RR S MHPMEIVEA+DKLQERLKVV Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PE NKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +FD++EGF P Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E+EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSY++GLDFGMTPSRSPI GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y +GMMSPNY+LSPNLRLSP +DAQFSPYVGGMAF Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein [Populus trichocarpa] gi|550338614|gb|ERP60834.1| DNA-directed RNA polymerase II largest subunit family protein [Populus trichocarpa] Length = 1837 Score = 2811 bits (7287), Expect = 0.0 Identities = 1387/1538 (90%), Positives = 1470/1538 (95%), Gaps = 3/1538 (0%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSV+QIEH ETTERGKPK GLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+DHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K+KNPK+RLK+ILDACKNKTKCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPKLTI Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK+QRKKSDDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYAR Sbjct: 181 EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+GAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTI+KPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+RT+AWH +SE G +TPGDT VRIE+GE+++GTLCKKTLGTS+GSLIHVIWEEVGPDAA Sbjct: 601 LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTMEKINETIS AKNEVK+LIR AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF++V+ YEFDDE+WNP+Y++ +HV+DL+NIRE R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKAEFDRVFRYEFDDEDWNPTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLR--RPSGMHPMEIVEAVDKLQERLKV 3241 LG +I TTGD+ WPMPVNLKRLIWNAQKTFKID R R S +HPME VEAVDKLQERLKV Sbjct: 961 LGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKV 1020 Query: 3242 VHGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVA 3421 V GDD +S EAQKNATLFF ILLRSTLASKRVL+EYRL++EAF+WV+GEIESRFLQSLVA Sbjct: 1021 VPGDDLLSVEAQKNATLFFGILLRSTLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVA 1080 Query: 3422 SGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVY 3601 GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVY Sbjct: 1081 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1140 Query: 3602 LKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDE 3781 LKPE NKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED DFVKSYYEMPDE Sbjct: 1141 LKPEFNKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDE 1200 Query: 3782 EISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 3961 E++P+KISPWLLR+ELNREMM+DKKL+MADIAEKIN EFDDDLTCIFNDDNAEKLILRIR Sbjct: 1201 EVAPEKISPWLLRIELNREMMIDKKLNMADIAEKINHEFDDDLTCIFNDDNAEKLILRIR 1260 Query: 3962 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGF 4141 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K FD+ EGF Sbjct: 1261 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNAKVSSFDESEGF 1320 Query: 4142 MPEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISF 4321 EWMLDTEGVNLLAV+C+E+VDA +TTSNHLIEV+EV+GIEAVR+SLLDELRVVISF Sbjct: 1321 KTTEEWMLDTEGVNLLAVMCNENVDARKTTSNHLIEVIEVIGIEAVRRSLLDELRVVISF 1380 Query: 4322 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 4501 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET Sbjct: 1381 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1440 Query: 4502 DHLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMG 4681 D+LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSYMEGLDFGMTP+RSP+ G Sbjct: 1441 DYLRGVTENIMLGQLAPIGTGYCALYLNDEMLKNAIELQLPSYMEGLDFGMTPARSPVSG 1500 Query: 4682 TPYRDGMMSPNYMLSPNLRLSPTND-AQFSPYVGGMAF 4792 TPY DGMMSP ++SPNLR+SPT D FSPYVGGMAF Sbjct: 1501 TPYHDGMMSP-MLMSPNLRMSPTVDGVAFSPYVGGMAF 1537 >ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] gi|548833823|gb|ERM96260.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] Length = 1844 Score = 2810 bits (7284), Expect = 0.0 Identities = 1381/1538 (89%), Positives = 1472/1538 (95%), Gaps = 3/1538 (0%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFP+SPAEVAKVR+VQFGI+SP+EIR MSVV+I+H ET ERGKPK +GLSDPRLGTI Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCS+ILADE+DH+ Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEI-EGQGRDSEEPVKKAR-GGCGAQQPKL 721 FK A K++NPK RLK++LD CKNKTKCEGGD+I E Q +DSEE VKK R GGCGAQQPK+ Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180 Query: 722 TIEGMKMIAEYKLQRKKSDDQEQ-LPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPK 898 TIEGMKM+AEYKL RKK+D+QEQ LPEPVERKQQL+AE+VL+VLKRI+DEDC LLGLNPK Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240 Query: 899 YARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 1078 YARPDWMILQV+ SVMMDTSSRSEDDLTHQLAM+IRHNENL+RQE+NGAPAH Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300 Query: 1079 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 1258 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360 Query: 1259 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKY 1438 SARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKY Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420 Query: 1439 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 1618 IIREDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480 Query: 1619 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 1798 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540 Query: 1799 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPK 1978 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPK Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600 Query: 1979 QINLMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGP 2158 QINL+R SAWHSESE+GF+TPGDT VRIERGE+++GTLCKKTLGTS+GSLIHVIWEEVGP Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660 Query: 2159 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQE 2338 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADA+TMEKINETISKAKNEVKELI+AAQE Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720 Query: 2339 KQLEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINIS 2518 KQLEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINIS Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780 Query: 2519 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 2698 QMTACVGQQNVEGKRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840 Query: 2699 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 2878 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900 Query: 2879 SQRLDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEED 3058 SQ+LDSLKMK+ EF VY YE D ENW+PSY+LPEHV+DL+ IREF+NVFDAE++KLE D Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960 Query: 3059 RLQLGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLK 3238 R QLG +I TTGD+ WPMPVNLKRLIWNAQK FK+DLRRPS MHPMEIVEAVDKLQERLK Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020 Query: 3239 VVHGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLV 3418 VV GDD MS EAQKNATLFFNILLRST ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLV Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080 Query: 3419 ASGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSV 3598 A GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140 Query: 3599 YLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPD 3778 YLK EVNKTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEED+DFV+SYYEMPD Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200 Query: 3779 EEISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 3958 EE++P+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260 Query: 3959 RIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEG 4138 RIMNDEAPKGEL DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD++EG Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320 Query: 4139 FMPEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVIS 4318 F PE+EWMLDTEGVNLLAV+C+E+VDATRTTSNHLIEV++VLGIEAVR++LLDELRVVIS Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380 Query: 4319 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 4498 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440 Query: 4499 TDHLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIM 4678 DHLRGVTENIMLGQLAPIGTGDCALYLND+ML+ AI+LQLPSYMEG+DFGMTPSRSP+ Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMT 1500 Query: 4679 GTPYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 GTPY +GMMSP Y+LSPN+R SP DAQFSPYVGGMAF Sbjct: 1501 GTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537 >ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine max] Length = 1827 Score = 2805 bits (7272), Expect = 0.0 Identities = 1376/1535 (89%), Positives = 1465/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+ GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+DHK Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A +++NPK RLK+ILDACKNK+KCEGGDEI+ G+D++EPVKK+RGGCGAQQPK+TI Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R S+WHSESE G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTME IN+TIS AK +VK+LIR AQEK+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMMDSFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF++V+ YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KLE DR Q Sbjct: 901 LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I TTGD P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERLKVV Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+D +S EAQKNATL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASG Sbjct: 1021 GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYL+ Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLR 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 +V KTKERAK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED DFVKSYYEMPDEE+ Sbjct: 1141 SDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDEEV 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 + +KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGE+ DESAEDDVFLKKIESNMLTEM LRGIPDINKVFIKN K +FD+++GF P Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQGFKP 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 EWMLDTEGVNLLAV+CHEDVDATRTTSNHLIEV+EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTG+CALYLND+ML++AI+LQLPSYM+GLDFGMTP+RSPI GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y +G+MSP+Y+LSPNLRLSPT+DAQFSPYVGGMAF Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535 >ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris] gi|561031277|gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris] Length = 1834 Score = 2805 bits (7270), Expect = 0.0 Identities = 1374/1535 (89%), Positives = 1464/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+AGLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+DHK Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A +++NPK RLK+ILDACKNK+KCEGGDEI+ G+D++EPVKK+RGGCGAQQPK+TI Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMK+IAEYK QRKKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFI KDVFMN LMWWEDFDGKVP PTILKP PLWTGKQVFNLIIPK IN Sbjct: 541 LLGCRKITKRDTFISKDVFMNTLMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R S+WHSESE G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTME IN+TIS AK +VK+LIR AQEK+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMMDSFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF++V+ YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KLE DR Q Sbjct: 901 LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I TTGD P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERL+VV Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLRVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+D +S EAQKNATL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASG Sbjct: 1021 GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYL Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLN 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P+V KTKERAK+VQCALEYTTLRSVTQATEVWYDP+PMSTII+ED+DFVKSYYEMPDEE+ Sbjct: 1141 PDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPEPMSTIIDEDVDFVKSYYEMPDEEV 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 + +KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGE+ DESAEDDVFLKKIESNMLTEM LRGIPDINKVFIKN K +FD+ EGF P Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDESEGFKP 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 EWMLDTEGVNLLAV+CHEDVDATRTTSNHLIEV+EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTG+CALYLND+ML++AI+LQLPSYM+GLDFGMTP+RSPI GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y +G+MSP+Y+LSPNLRLSPT+DAQFSPYVGGMAF Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535 >ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina] gi|557527347|gb|ESR38597.1| hypothetical protein CICLE_v10024686mg [Citrus clementina] Length = 1860 Score = 2800 bits (7257), Expect = 0.0 Identities = 1368/1535 (89%), Positives = 1456/1535 (94%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K++NPK RLK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTI Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I T+GD WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSP Y+ SPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5 [Citrus sinensis] Length = 1963 Score = 2799 bits (7256), Expect = 0.0 Identities = 1368/1535 (89%), Positives = 1456/1535 (94%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K++NPK RLK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTI Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I T+GD WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSP Y+ SPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4 [Citrus sinensis] Length = 1853 Score = 2799 bits (7256), Expect = 0.0 Identities = 1368/1535 (89%), Positives = 1456/1535 (94%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K++NPK RLK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTI Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I T+GD WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSP Y+ SPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3 [Citrus sinensis] Length = 1790 Score = 2799 bits (7256), Expect = 0.0 Identities = 1368/1535 (89%), Positives = 1456/1535 (94%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K++NPK RLK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTI Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I T+GD WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSP Y+ SPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1 [Citrus sinensis] gi|568825318|ref|XP_006467028.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X2 [Citrus sinensis] Length = 1860 Score = 2799 bits (7256), Expect = 0.0 Identities = 1368/1535 (89%), Positives = 1456/1535 (94%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K++NPK RLK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTI Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I T+GD WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSP Y+ SPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|590702285|ref|XP_007046586.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] Length = 1861 Score = 2799 bits (7256), Expect = 0.0 Identities = 1371/1536 (89%), Positives = 1464/1536 (95%), Gaps = 1/1536 (0%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+ GLSDPRLGTI Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE++HK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K+KNPK RLK+ILDACKNK+KCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPKL+I Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 +GMKMIAEYK QRK++DDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+AR Sbjct: 181 DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R SAWHSE+ETGF+TPGDTQVRIE+GE+++GTLCKK LGTS+GSLIHVIWEEVGPDAA Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISKAK EVK LI AQ K L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFEN+VNQVLNKARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNP-SYLLPEHVDDLQNIREFRNVFDAELKKLEEDRL 3064 LDSLKMKK EF++V+ Y DDE+WNP SY+LPEH++DL+ I+E R+VF+AE++KL+ DR Sbjct: 901 LDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRY 960 Query: 3065 QLGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVV 3244 QLG +I TGD WP+PVNLKRLIWNAQKTFK+D RR S +HP+EIV++VDKLQERLKVV Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020 Query: 3245 HGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVAS 3424 G DP+S EAQKNATLFF+ILLRSTLASKRVL+EYRLTKEAFEWV+GEIESRFLQSLVA Sbjct: 1021 PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080 Query: 3425 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYL 3604 GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYL Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140 Query: 3605 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 3784 PE +KTKE+AKNVQCALEYTTLRSVT ATEVWYDPDP STIIEEDIDFVKSYYEMPDEE Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEE 1200 Query: 3785 ISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 3964 ++P+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260 Query: 3965 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFM 4144 MNDE PKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD+ +G+ Sbjct: 1261 MNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320 Query: 4145 PEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFD 4324 EW+LDTEGVNLLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFD Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380 Query: 4325 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4504 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440 Query: 4505 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGT 4684 +LRGVTENIMLGQLAPIGTGDCALYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GT Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500 Query: 4685 PYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 PY +GMMSP+Y+LSPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1536 >ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer arietinum] Length = 1834 Score = 2795 bits (7245), Expect = 0.0 Identities = 1372/1535 (89%), Positives = 1460/1535 (95%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPKI GLSDPRLGTI Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE DHK Sbjct: 61 DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A ++K+PK RL++ILDACKNKTKCEGGD+I+ G D+EEPVKK+RGGCGAQQPK+TI Sbjct: 121 FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYAR Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDW+ILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS Sbjct: 241 PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD+ Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVP PTILKP P+WTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R S+WH+E+E G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTME IN+TIS+AK +VK+LIR AQEK+L Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMM+SFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK +F++ + YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KL+ DR Q Sbjct: 901 LDSLKMKKADFDRAFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRFQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 L +I TTGD P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERLKVV Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +S EAQKNATL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASG Sbjct: 1021 GDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PEV KTKERAK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE+ Sbjct: 1141 PEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 + +KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGE+ DESAEDDVFLKKIESNMLTEM LRGI DINKVFIKN K +FD++EGF P Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIADINKVFIKNTKIQKFDENEGFKP 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1321 YEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTG+CAL LND+ML++AI+LQLPSYMEGLDFGMTP RSPI TP Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y +G+MSP+Y+LSPNLRLSPTNDAQFSPYVGGMAF Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPTNDAQFSPYVGGMAF 1535 >ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus communis] Length = 1855 Score = 2793 bits (7240), Expect = 0.0 Identities = 1369/1535 (89%), Positives = 1456/1535 (94%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIE ETTERGKPK GLSD RLGTI Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE+DHK Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A K+KNPK RLK+ILDACKNKTKCEGGD+I+ +D++EPVKK+RGGCGAQQP++TI Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISD+DC LLG NPKYAR Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTSSRSEDDLTHQLAMIIRHNENL++QE+ GAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+RT+AWHS+SE G +TPGDT VRIE+GE+++GT+CKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETIS AKN VKELIR AQ K+L Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E +PGRTMM+SFEN VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLKMKK EF++V+ YE DDENWNP+Y+ +H+DDL+NIRE R+VFDAE++KLE DR Q Sbjct: 901 LDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TTGD WP+PVNL+RLIWNAQKTFK+D RRPS +HPME VEAVDKLQERLKVV Sbjct: 961 LGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDDP+S EAQKNATLFF ILLRSTLASKRVL++YRLT+EAF+WV+GEIESRFLQSLVA G Sbjct: 1021 GDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLS++L Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLI 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEEI Sbjct: 1141 PECNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 SP+KISPWLLR+ELNREMMVDKKL+MADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +FD++EGF Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQSKVSKFDENEGFKT 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 EWMLDTEGVNLLAV+C+E+VDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1321 IEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D+ Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADY 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 4687 LRGVTENIMLGQLAPIGTGDCALYLND ML++AI+LQLPSYM+GLDFGMTP+RSP+ TP Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDDMLKNAIELQLPSYMDGLDFGMTPARSPVSVTP 1500 Query: 4688 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 Y DGMMSP+Y+LSP+LRLSPT DAQFSPYV GM F Sbjct: 1501 YHDGMMSPSYLLSPSLRLSPTTDAQFSPYVSGMPF 1535 >gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus] Length = 1842 Score = 2793 bits (7239), Expect = 0.0 Identities = 1372/1537 (89%), Positives = 1460/1537 (94%), Gaps = 2/1537 (0%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVV IEH ETTERGKPKI GLSDPRLGTI Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE++ K Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A +++NPK RL++ILDACKNKTKC+GGDEI+G +D+EEPVKK+RGGCGAQQPK++I Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 +GMKM+AEYKLQ+KKSDDQ+Q+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPK+AR Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R SAWH E+E GF+TPGDTQVRIE+GE++TGTLCKK LGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQ AFS+GIGDTIADA+TMEKINETIS AKNEVKELIRAAQEKQL Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 E EPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 L+SLK+KK +FN +Y YE D+ NWNP+Y+LPE V+DL+ IRE R+VFDAE+ KLE DR Q Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TTGD+ WP+PVN+KRL+ NAQKTFK+D RRPS MHPMEIVEAVDKLQERLKVV Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +STEAQKNATLFFNILLRS LASKRVLKEYRLT+EAFEWV+GEIESRFLQSLVA+G Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 P+V+KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDEEI Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 PDKISPWLLR+ELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKN K +FD+++GF Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+CHE+VD RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGT 4684 LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AI++ LPSYME GL+FGMTP RSP GT Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500 Query: 4685 PYRDGMMSPNYML-SPNLRLSPTNDAQFSPYVGGMAF 4792 PY DGMMSPNY+L SPNLRLSP DAQFSPYVGGMAF Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537 >ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum lycopersicum] Length = 1846 Score = 2792 bits (7237), Expect = 0.0 Identities = 1373/1536 (89%), Positives = 1461/1536 (95%), Gaps = 1/1536 (0%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVV IEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEDD K Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A +++NPK RL+++LDACKNKTKCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPK++I Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 +GMKM+AEYK+Q+KKSDD EQ+PEPVERKQQLSAERVLS+LKR+SDEDC LLGLNP++AR Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQ L SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R SAWH++SE G++TPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETIS AK +VKELI+AAQEK L Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMM+SFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLK KKG F+ +Y YE DD NWNPSY+LPE V+DL+ IRE R+VFDAE++KLE DR Q Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TGD+ WP+PVN++RL+ NAQKTFKID RRPS MHPMEIVEAVDKLQERLKVV Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +S EAQKNATLFFNILLRS LASKRVLKEYRL++EAFEWVVGEIESRFLQSLVA G Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 PDKISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K +FDD+EGF Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+ HEDVDA+RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+DH Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGT 4684 LRGVTENIMLGQLAPIGTG C+LYLN++ML+ AI++ LPSYME GL+FGMTP RSPI GT Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499 Query: 4685 PYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 PY DGMMSPNY+LSPN+R+SP DAQFSPYVGGMAF Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535 >ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum tuberosum] Length = 1839 Score = 2791 bits (7234), Expect = 0.0 Identities = 1372/1536 (89%), Positives = 1460/1536 (95%), Gaps = 1/1536 (0%) Frame = +2 Query: 188 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 367 MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVV IEHGETTERGKPK GLSDPRLGTI Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60 Query: 368 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 547 DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEDD K Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120 Query: 548 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 727 FK A +++NPK RL+++LDACKNKTKCEGGDEI+ QG D+EEPVKK+RGGCGAQQPK++I Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180 Query: 728 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 907 +GMKM+AEYK+Q+KKSDD EQ+PEPVERKQQLSAERVLS+LKR+SDEDC LLGLNP++AR Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240 Query: 908 PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 1087 PDWMILQ L SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300 Query: 1088 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1267 EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360 Query: 1268 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1447 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420 Query: 1448 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1627 +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480 Query: 1628 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1807 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540 Query: 1808 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1987 LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600 Query: 1988 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2167 L+R SAWH++SE G++TPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660 Query: 2168 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 2347 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETIS AK +VKELI+AAQEK L Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720 Query: 2348 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2527 EAEPGRTMM+SFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780 Query: 2528 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2707 ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840 Query: 2708 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2887 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q+ Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900 Query: 2888 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 3067 LDSLK KKG F+ +Y YE DD NWNPSY+LPE V+DL+ IRE R+VFDAE++KLE DR Q Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960 Query: 3068 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 3247 LG +I TGD+ WP+PVN++RL+ NAQKTFKID RRPS MHPMEIVEAVDKLQERLKVV Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020 Query: 3248 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 3427 GDD +S EAQKNATLFFNILLRS LASKRVLKEYRL++EAFEWVVGEIESRFLQSLVA G Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080 Query: 3428 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 3607 EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140 Query: 3608 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 3787 PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200 Query: 3788 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3967 PDKISPWLLR+ELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260 Query: 3968 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 4147 NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K +FDD+EGF Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319 Query: 4148 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 4327 E EWMLDTEGVNLLAV+ HEDVDA+RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379 Query: 4328 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 4507 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+DH Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439 Query: 4508 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGT 4684 LRGVTENIMLGQLAPIGTG C+LYLN++ML+ AI++ LPSYME GL+FGMTP RSPI GT Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499 Query: 4685 PYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4792 PY DGMMSPNY+LSPN+R+SP DAQFSPYVGGMAF Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535