BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00002081
         (543 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I...   108   6e-22
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr...   107   1e-21
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part...   107   1e-21
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ...   107   2e-21
gb|EYU26259.1| hypothetical protein MIMGU_mgv1a017602mg [Mimulus...   105   5e-21
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1...   105   5e-21
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr...   105   7e-21
ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III ...   105   7e-21
ref|XP_007023679.1| DNA directed RNA polymerase, 7 kDa subunit [...   104   2e-20
gb|AFK41236.1| unknown [Medicago truncatula]                          104   2e-20
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I...   103   2e-20
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp....   102   5e-20
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ...   102   8e-20
ref|NP_001172391.1| Os01g0530366 [Oryza sativa Japonica Group] g...   102   8e-20
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I...   101   1e-19
emb|CBI25651.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, I...   100   4e-19
ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, I...    99   5e-19
gb|ABK21111.1| unknown [Picea sitchensis]                              99   5e-19
ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, I...    99   7e-19

>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Vitis vinifera]
           gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4 [Vitis
           vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
           product [Vitis vinifera]
          Length = 51

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPVSY CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
           gi|557106544|gb|ESQ46859.1| hypothetical protein
           EUTSA_v10028022mg [Eutrema salsugineum]
          Length = 51

 Score =  107 bits (268), Expect = 1e-21
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDPLPEPV+Y CGDCGQENTLK GDVIQCRECGYRILYKKRTRRVVQYEAR
Sbjct: 1   MDPLPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51


>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
           gi|482553592|gb|EOA17785.1| hypothetical protein
           CARUB_v10006178mg, partial [Capsella rubella]
          Length = 68

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/65 (80%), Positives = 55/65 (84%), Gaps = 7/65 (10%)
 Frame = -2

Query: 479 FVIVVEP------MD-PLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVV 321
           F+I+  P      MD PLPEPV+Y CGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVV
Sbjct: 4   FIIIKNPRIQFNTMDQPLPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVV 63

Query: 320 QYEAR 306
           QYEAR
Sbjct: 64  QYEAR 68


>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 12 [Glycine max]
           gi|567912183|ref|XP_006448405.1| hypothetical protein
           CICLE_v10017429mg [Citrus clementina]
           gi|593704333|ref|XP_007152540.1| hypothetical protein
           PHAVU_004G138700g [Phaseolus vulgaris]
           gi|255630274|gb|ACU15492.1| unknown [Glycine max]
           gi|557551016|gb|ESR61645.1| hypothetical protein
           CICLE_v10017429mg [Citrus clementina]
           gi|561025849|gb|ESW24534.1| hypothetical protein
           PHAVU_004G138700g [Phaseolus vulgaris]
          Length = 51

 Score =  107 bits (266), Expect = 2e-21
 Identities = 47/51 (92%), Positives = 48/51 (94%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPVSY CGDCG ENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>gb|EYU26259.1| hypothetical protein MIMGU_mgv1a017602mg [Mimulus guttatus]
           gi|604334021|gb|EYU38219.1| hypothetical protein
           MIMGU_mgv1a017594mg [Mimulus guttatus]
          Length = 51

 Score =  105 bits (263), Expect = 5e-21
 Identities = 47/51 (92%), Positives = 48/51 (94%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPVSY CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
           thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           12; AltName: Full=DNA-directed RNA Polymerase II subunit
           K gi|9759147|dbj|BAB09703.1| unnamed protein product
           [Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
           unknown protein [Arabidopsis thaliana]
           gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
           thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
           polymerase II polypeptide K [Arabidopsis thaliana]
           gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
           NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
          Length = 51

 Score =  105 bits (263), Expect = 5e-21
 Identities = 47/51 (92%), Positives = 48/51 (94%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPV+Y CGDCGQENTLK GDVIQCRECGYRILYKKRTRRVVQYEAR
Sbjct: 1   MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51


>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
           gi|567131670|ref|XP_006392764.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|567131674|ref|XP_006392765.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089341|gb|ESQ30049.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089342|gb|ESQ30050.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089343|gb|ESQ30051.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
          Length = 51

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/51 (92%), Positives = 48/51 (94%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPV+Y CGDCGQENTLK GDVIQCRECGYRILYKKRTRRVVQYEAR
Sbjct: 1   MDPQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51


>ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III subunit RPABC4
           [Medicago truncatula] gi|355484947|gb|AES66150.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC4 [Medicago truncatula]
          Length = 121

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = -2

Query: 470 VVEPMDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           +V  MDPLPEPVSY CGDCG ENTLK GDVIQCR+CGYRILYKKRTRR+VQYEAR
Sbjct: 10  IVGVMDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYEAR 64



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP P+P+ Y CGDCG E  L    V+QC  C Y+ILYKKRT RV+QYEAR
Sbjct: 71  MDPPPQPIRYLCGDCGAETPLYTDGVLQCCVCFYKILYKKRTHRVLQYEAR 121


>ref|XP_007023679.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
           gi|508779045|gb|EOY26301.1| DNA directed RNA polymerase,
           7 kDa subunit [Theobroma cacao]
          Length = 51

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPV+Y CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQPEPVTYICGDCGQENTLKHGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>gb|AFK41236.1| unknown [Medicago truncatula]
          Length = 51

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDPLPEPVSY CGDCG ENTLK GDVIQCR+CGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYEAR 51


>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Cucumis sativus]
           gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Cucumis sativus]
          Length = 51

 Score =  103 bits (258), Expect = 2e-20
 Identities = 46/51 (90%), Positives = 47/51 (92%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPVSY CGDCG ENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51


>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316495|gb|EFH46918.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 52

 Score =  102 bits (255), Expect = 5e-20
 Identities = 47/52 (90%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
 Frame = -2

Query: 458 MDPL-PEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           M+P  PEPV+Y CGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR
Sbjct: 1   MEPAQPEPVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 52


>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
           1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
           DNA-directed RNA polymerase I, II, and III polypeptide
           isoform 2, partial [Zea mays]
          Length = 100

 Score =  102 bits (253), Expect = 8e-20
 Identities = 47/52 (90%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = -2

Query: 458 MDPL-PEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP  PEPVSY CGDCG ENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 49  MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 100


>ref|NP_001172391.1| Os01g0530366 [Oryza sativa Japonica Group]
           gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
           sativa Japonica Group] gi|615276275|ref|NP_001278509.1|
           LOC100285004 [Zea mays] gi|242048352|ref|XP_002461922.1|
           hypothetical protein SORBIDRAFT_02g010660 [Sorghum
           bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
           protein SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Setaria italica] gi|195609858|gb|ACG26759.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
           hypothetical protein OsI_02267 [Oryza sativa Indica
           Group] gi|222618595|gb|EEE54727.1| hypothetical protein
           OsJ_02072 [Oryza sativa Japonica Group]
           gi|241925299|gb|EER98443.1| hypothetical protein
           SORBIDRAFT_02g010660 [Sorghum bicolor]
           gi|241940338|gb|EES13483.1| hypothetical protein
           SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
           Japonica Group] gi|255676033|dbj|BAH92949.1|
           Os05g0151800 [Oryza sativa Japonica Group]
          Length = 52

 Score =  102 bits (253), Expect = 8e-20
 Identities = 47/52 (90%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = -2

Query: 458 MDPL-PEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP  PEPVSY CGDCG ENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52


>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Solanum lycopersicum]
          Length = 52

 Score =  101 bits (251), Expect = 1e-19
 Identities = 47/52 (90%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = -2

Query: 458 MDPLP-EPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MD  P EPVSY CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDSQPVEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52


>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
          Length = 82

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQ 318
           MDP PEPVSY CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQ
Sbjct: 1   MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQ 47


>ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Cicer arietinum]
          Length = 51

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 458 MDPLPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP PEPVSY CGDCG ENT+K GDVI+CR+CGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQPEPVSYLCGDCGVENTIKSGDVIRCRDCGYRILYKKRTRRIVQYEAR 51


>ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Setaria italica]
          Length = 52

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 45/52 (86%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
 Frame = -2

Query: 458 MDPL-PEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP  PEPVSY CGDCG ENTLKPGDVIQCR+CGYRILYKKRT R+VQYEAR
Sbjct: 1   MDPQQPEPVSYLCGDCGSENTLKPGDVIQCRDCGYRILYKKRTHRIVQYEAR 52


>gb|ABK21111.1| unknown [Picea sitchensis]
          Length = 53

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = -2

Query: 449 LPEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           +PEPVSY CGDCG EN+LKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 6   VPEPVSYICGDCGAENSLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 53


>ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Brachypodium distachyon]
           gi|357145250|ref|XP_003573577.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Brachypodium distachyon]
          Length = 52

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 46/52 (88%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
 Frame = -2

Query: 458 MDPL-PEPVSYTCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 306
           MDP  PEPVSY CGDCG ENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 1   MDPQQPEPVSYLCGDCGAENTLKSGDVIQCRECGYRILYKKRTRRIVQYEAR 52