BLASTX nr result
ID: Paeonia24_contig00001941
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia24_contig00001941 (2830 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 974 0.0 emb|CBI16226.3| unnamed protein product [Vitis vinifera] 971 0.0 ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 937 0.0 ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 931 0.0 ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 911 0.0 ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 910 0.0 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 910 0.0 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 904 0.0 ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 895 0.0 ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 890 0.0 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 890 0.0 ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 887 0.0 dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 887 0.0 ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 887 0.0 ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 886 0.0 ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 877 0.0 ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 876 0.0 gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 873 0.0 ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thali... 872 0.0 ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 872 0.0 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 974 bits (2519), Expect(2) = 0.0 Identities = 483/655 (73%), Positives = 556/655 (84%), Gaps = 9/655 (1%) Frame = -1 Query: 2641 FTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSRMGP 2462 FTKEPYIED GPRK+ SI+F+L SE+EI K AEVQ+W+ YYD ++KPIE+GLLD RMGP Sbjct: 7 FTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMGP 66 Query: 2461 PNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAEIPR 2282 NKNG CATC G+F CPGH GYL L LPVYNVGYL+ I +ILKCICKSCSR+LL E Sbjct: 67 ANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKAS 126 Query: 2281 KDYLRRMRTQKI-AQKKTDMQKIIIKTCNTPGLKN----CSRCGYVNGIVKKATGMLGII 2117 KDYL++MR+QK+ A KK ++ K I++ C CSRCGY+NGIVKKA +LGII Sbjct: 127 KDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGII 186 Query: 2116 HDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVLYLADR 1937 HDRSKIAD S+EEC +A+SH KE S+ S ++V +L P KVLSLFK+M+DEDC++L LA+R Sbjct: 187 HDRSKIADGSLEECSSAISHTKE-SKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAER 245 Query: 1936 PEKLIITSIAVPPTVIRPSVLV-GGTRSNENDITERLKRIIQANARVRTMLD---GTNRS 1769 PEKL++T+I VPP IRPSV + GGT+SNEND+TERLKRIIQANA + L T++ Sbjct: 246 PEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKC 305 Query: 1768 QTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFTGR 1589 W+YLQIEVAQYINS +GVP MQA RPLSGFVQRLKGKQGRFR NLS KRVE+TGR Sbjct: 306 LAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGR 365 Query: 1588 TVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFPDG 1409 TVISPDPNLKITEV +PILMA+ L++PERV+ HNIEKLRQC+ NG KYPGAK + +PDG Sbjct: 366 TVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDG 425 Query: 1408 SKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLR 1229 S SLMF GRKR+ADELK GYIV+RHLEDGDVVLFNRQPSLHRMSIM HRA+IMPWRTLR Sbjct: 426 SMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 485 Query: 1228 FNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFLT 1049 FNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPKNGEILVASTQDFLT Sbjct: 486 FNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 545 Query: 1048 SSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPNAS 869 SSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLPTP I KP+ELWTGKQLF+VL+RP+A+ Sbjct: 546 SSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHAN 605 Query: 868 LRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 +RVY+NLTV EKT+ K + ++TMCP+DGFVYFRNSELISGQLGKATLGNG+K+G Sbjct: 606 VRVYLNLTVMEKTYNKR-RGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDG 659 Score = 388 bits (996), Expect(2) = 0.0 Identities = 189/227 (83%), Positives = 204/227 (89%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQPG L+ QK+ +I EGY C E I+ Y+ GKL+L G Sbjct: 679 RLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPG 738 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 C+AAQTLE ITG LN IRETT +VCM ELHWRNSPLIMSQCGSKGSPINISQMIACVGQ Sbjct: 739 CNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 798 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAP+GFIDR+LPHFPR SKTP AKGFVA+SFY+GLTATEFFFHTMGGREGLVDT Sbjct: 799 QSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDT 858 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDLSIQYD+TVRNANG IVQF YGDDG+D Sbjct: 859 AVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMD 905 >emb|CBI16226.3| unnamed protein product [Vitis vinifera] Length = 1819 Score = 971 bits (2509), Expect(2) = 0.0 Identities = 482/655 (73%), Positives = 555/655 (84%), Gaps = 9/655 (1%) Frame = -1 Query: 2641 FTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSRMGP 2462 FTKEPYIED GPRK+ SI+F+L SE+EI K AEVQ+W+ YYD ++KPIE+GLLD RMGP Sbjct: 7 FTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMGP 66 Query: 2461 PNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAEIPR 2282 NKNG CATC G+F CPGH GYL L LPVYNVGYL+ I +ILKCICKSCSR+LL E Sbjct: 67 ANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKAS 126 Query: 2281 KDYLRRMRTQKI-AQKKTDMQKIIIKTCNTPGLKN----CSRCGYVNGIVKKATGMLGII 2117 KDYL++MR+QK+ A KK ++ K I++ C CSRCGY+NGIVKKA +LGII Sbjct: 127 KDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGII 186 Query: 2116 HDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVLYLADR 1937 HDRSKIAD S+EEC +A+SH KE S+ S ++V +L P KVLSLFK+M+DEDC++L LA+R Sbjct: 187 HDRSKIADGSLEECSSAISHTKE-SKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAER 245 Query: 1936 PEKLIITSIAVPPTVIRPSVLV-GGTRSNENDITERLKRIIQANARVRTMLD---GTNRS 1769 PEKL++T+I VPP IRPSV + GGT+SNEND+TERLKRIIQANA + L T++ Sbjct: 246 PEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKC 305 Query: 1768 QTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFTGR 1589 W+YLQIEVAQYINS +GVP MQA RPLSGFVQRLKGKQGRFR NLS KRVE+TGR Sbjct: 306 LAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGR 365 Query: 1588 TVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFPDG 1409 TVISPDPNLKITEV +PILMA+ L++PERV+ HNIEKLRQC+ NG KYPGAK + +PDG Sbjct: 366 TVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDG 425 Query: 1408 SKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLR 1229 S SLMF GRKR+ADELK GYIV+RHLEDGDVVLFNRQPSLHRMSIM HRA+IMPWRTLR Sbjct: 426 SMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 485 Query: 1228 FNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFLT 1049 FNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPKNGEILVASTQDFLT Sbjct: 486 FNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 545 Query: 1048 SSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPNAS 869 SSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLPTP I K +ELWTGKQLF+VL+RP+A+ Sbjct: 546 SSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPHAN 605 Query: 868 LRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 +RVY+NLTV EKT+ K + ++TMCP+DGFVYFRNSELISGQLGKATLGNG+K+G Sbjct: 606 VRVYLNLTVMEKTYNKR-RGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDG 659 Score = 388 bits (996), Expect(2) = 0.0 Identities = 189/227 (83%), Positives = 204/227 (89%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQPG L+ QK+ +I EGY C E I+ Y+ GKL+L G Sbjct: 679 RLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPG 738 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 C+AAQTLE ITG LN IRETT +VCM ELHWRNSPLIMSQCGSKGSPINISQMIACVGQ Sbjct: 739 CNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 798 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAP+GFIDR+LPHFPR SKTP AKGFVA+SFY+GLTATEFFFHTMGGREGLVDT Sbjct: 799 QSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDT 858 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDLSIQYD+TVRNANG IVQF YGDDG+D Sbjct: 859 AVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMD 905 >ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao] gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] Length = 1395 Score = 937 bits (2421), Expect(2) = 0.0 Identities = 473/662 (71%), Positives = 542/662 (81%), Gaps = 16/662 (2%) Frame = -1 Query: 2641 FTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSRMGP 2462 FTK PYIED GPRK+ SI+FS+ S++EI K AEVQ+++A YYD +PIE GLLD RMGP Sbjct: 5 FTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMGP 64 Query: 2461 PNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAEIPR 2282 NK+G CATCHG+F CPGHYGYL L LPVYNVGYL+ I +ILKCICKSCSRI+L E Sbjct: 65 ANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKLC 124 Query: 2281 KDYLRRMRTQKI-AQKKTDMQKIIIKTCNTPGLKN---CSRCGYVNGIVKKATGMLGIIH 2114 KDYL+RMR+ KI A KK D+ K I+K C+ C RCGYVNG VKKA MLGIIH Sbjct: 125 KDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAMLGIIH 184 Query: 2113 DRSKIADKSVEECRAAVSHIKEQSRGSVNMV-YMLTPAKVLSLFKKMLDEDCEVLYLADR 1937 DRSKI D S+EE R+A+SH KE S+ S N+ Y+L P KVLSLFK+M D DCE+LYL+DR Sbjct: 185 DRSKINDNSLEEFRSAISHTKE-SKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDR 243 Query: 1936 PEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDGTN---RSQ 1766 PEKLIIT+IAVPP IRPSV++ G++SNENDITERLKRIIQANA +R L TN + Sbjct: 244 PEKLIITNIAVPPIPIRPSVIMDGSQSNENDITERLKRIIQANASLRQELVETNAAFKCL 303 Query: 1765 TDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFTGRT 1586 WE LQ+EVAQYINS +GVP MQ +PLSGFVQR+KGK GRFR NLS KRVE+TGRT Sbjct: 304 GGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGRT 363 Query: 1585 VISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFPDGS 1406 VISPDPNLKITEV +PI MA+ LT+PERV++HNIEKLRQCVRNG +KYPGA+ + +PDGS Sbjct: 364 VISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYPDGS 423 Query: 1405 KVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLRF 1226 L+ RKR ADELK G +VDRHLEDGD+VLFNRQPSLHRMSIM HRA+IMPWRTLRF Sbjct: 424 ARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 483 Query: 1225 NESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFLTS 1046 NESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPKNGEILVASTQDFLTS Sbjct: 484 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 543 Query: 1045 SFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPNASL 866 SFLITRKD FYDRAAFSL+CSYMGDGMD +DLPTP + KPIELWTGKQLFSVL+RP+AS+ Sbjct: 544 SFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPHASV 603 Query: 865 RVYVNLTVTEKTFTKSWKRE--------KTMCPNDGFVYFRNSELISGQLGKATLGNGDK 710 RVY+NL V E+ ++K + +TMCP+DGFVY RNSELI GQLGKATLGNG+K Sbjct: 604 RVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGNGNK 663 Query: 709 NG 704 +G Sbjct: 664 DG 665 Score = 365 bits (937), Expect(2) = 0.0 Identities = 181/227 (79%), Positives = 198/227 (87%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQPG+ L+ +K I+ Y KCDE I+ +++GKL+ G Sbjct: 685 RLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPG 744 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 DAAQTLE +T LN IR+ TG VCM ELHWRNSPLIMSQCGSKGS INISQMIACVGQ Sbjct: 745 YDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQ 804 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAPNGFIDRSLPHF R SKTPAAKGFVANSFYSGLTATEFFFHTM GREGLVDT Sbjct: 805 QSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDT 864 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA+TGYM+RRL+KALEDLSI YD+TVRNA+G IVQF YGDDG+D Sbjct: 865 AVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMD 911 >ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Citrus sinensis] Length = 1404 Score = 931 bits (2405), Expect(2) = 0.0 Identities = 469/674 (69%), Positives = 545/674 (80%), Gaps = 15/674 (2%) Frame = -1 Query: 2680 MEQVNPETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKK 2501 M Q + Q+ FTK+PYIED GPRK+ SI+FS+ S++EI K AEVQ++K YY ++ Sbjct: 1 MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60 Query: 2500 PIESGLLDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCIC 2321 PIE GLLD RMGP NK+ CATCHG F+ CPGHYGYL L LPVYNVGYL+ I +ILKCIC Sbjct: 61 PIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCIC 120 Query: 2320 KSCSRILLAEIPRKDYLRRMRTQKI-AQKKTDMQKIIIKTCNTPGLK--NCSRCGYVNGI 2150 K CSR+LL E KDYL++MR K+ A +KTD+ K I+K C+T K C RCGY+NG+ Sbjct: 121 KYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGM 180 Query: 2149 VKKATGMLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMV-YMLTPAKVLSLFKKML 1973 VKKA +LGIIHDRSK+ + S++E +A++H KE S+ +VN+ Y+L P VL LFK+M Sbjct: 181 VKKAVAVLGIIHDRSKVTE-SLQEFASAITHTKE-SKAAVNVATYILNPVNVLFLFKRMT 238 Query: 1972 DEDCEVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRT 1793 D DCEVLYL++RPEKLIIT+IAVPP IRPSV++ G++SNENDITERLKRIIQ NA ++ Sbjct: 239 DTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITERLKRIIQTNASLQQ 298 Query: 1792 MLDGTN---RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQN 1622 L N +S WE LQ+EVAQYINS +GVP MQ RPLSGFVQRLKGKQGRFR N Sbjct: 299 ELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGN 358 Query: 1621 LSAKRVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKY 1442 LS KRVE+TGRTVISPDPNLKITEV +PI MA+ LT+PERV+ HNIEKLRQC++NG +KY Sbjct: 359 LSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKY 418 Query: 1441 PGAKFLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSH 1262 PGA+ + +PDG+ L R + A ELK G IVDRHLEDGDVVLFNRQPSLHRMSIM H Sbjct: 419 PGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCH 478 Query: 1261 RAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGE 1082 RA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPKNGE Sbjct: 479 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE 538 Query: 1081 ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQ 902 ILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGDGMD VDLPTP I KP+ELWTGKQ Sbjct: 539 ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQ 598 Query: 901 LFSVLVRPNASLRVYVNLTVTEKTFTKSWKRE--------KTMCPNDGFVYFRNSELISG 746 LFSVL+RP+A++RVYVNLTV EKT++ R +TMCPNDGFVYFRNSELISG Sbjct: 599 LFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISG 658 Query: 745 QLGKATLGNGDKNG 704 QLGKATLGNG+K+G Sbjct: 659 QLGKATLGNGNKDG 672 Score = 365 bits (937), Expect(2) = 0.0 Identities = 181/227 (79%), Positives = 196/227 (86%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQP + LS +K I+E Y C+ IK Y++GKL+L G Sbjct: 692 RLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPG 751 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE IT LN IRE G CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 752 CDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQ 811 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAPNGFIDRSLPHFPR +K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDT Sbjct: 812 QSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDT 871 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRL+KALEDLSIQYD++VRNA G IVQF YGDDG+D Sbjct: 872 AVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMD 918 >ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] gi|557526635|gb|ESR37941.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] Length = 1397 Score = 911 bits (2354), Expect(2) = 0.0 Identities = 465/683 (68%), Positives = 539/683 (78%), Gaps = 30/683 (4%) Frame = -1 Query: 2680 MEQVNPETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKK 2501 M Q + Q+ FTK+PYIED GPRK+ SI+FS+ S++EI K AEVQ++K YY ++ Sbjct: 1 MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60 Query: 2500 PIESGLLDSRM---------------GPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYN 2366 PIE GLLD RM GP NK+ CATCHG F+ CPGHYGYL L LPVYN Sbjct: 61 PIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYN 120 Query: 2365 VGYLNIIANILKCICKSCSRILLAEIPRKDYLRRMRTQKI-AQKKTDMQKIIIKTCNTPG 2189 VGYL+ I +ILKCICK CSR+LL E KDYL++MR K+ A +KTD+ K I+K C+T Sbjct: 121 VGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA 180 Query: 2188 LK--NCSRCGYVNGIVKKATGMLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMV-Y 2018 K C RCGY+NG+VKKA +LGIIHDRSK+ + S++E +A++H KE S+ +VN+ Y Sbjct: 181 SKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTE-SLQEFASAITHTKE-SKAAVNVATY 238 Query: 2017 MLTPAKVLSLFKKMLDEDCEVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDIT 1838 +L P VL LFK+M D DCEVLYL++RPEKLIIT+IAVPP IRPSV++ G++SNENDIT Sbjct: 239 ILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDIT 298 Query: 1837 ERLKRIIQANARVRTMLDGTN---RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSG 1667 ERLKRIIQ NA ++ L N +S WE LQ+EVAQYINS +GVP MQ RPLSG Sbjct: 299 ERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSG 358 Query: 1666 FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHN 1487 FVQRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV +PI MA+ LT+PERV+ HN Sbjct: 359 FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHN 418 Query: 1486 IEKLRQCVRNGSNKYPGAKFLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVL 1307 IEKLRQC++NG +KYPGA+ + +PDG+ L R + A ELK G IVDRHLEDGDVVL Sbjct: 419 IEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVL 478 Query: 1306 FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 1127 FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL Sbjct: 479 FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALL 538 Query: 1126 LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 947 LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGDGMD VDLP Sbjct: 539 LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLP 598 Query: 946 TPTIFKPIELWTGKQLFSVLVRPNASLRVYVNLTVTEKTFTKSWKRE--------KTMCP 791 TP I KP+ELWTGKQLFSVL+RP+A++RVYVNLTV EKT++ R +TMCP Sbjct: 599 TPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCP 658 Query: 790 NDGFVYFRNSELISGQLGKATLG 722 NDGFVYFRNSELISGQLGKATLG Sbjct: 659 NDGFVYFRNSELISGQLGKATLG 681 Score = 365 bits (937), Expect(2) = 0.0 Identities = 181/227 (79%), Positives = 196/227 (86%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQP + LS +K I+E Y C+ IK Y++GKL+L G Sbjct: 685 RLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPG 744 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE IT LN IRE G CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 745 CDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQ 804 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAPNGFIDRSLPHFPR +K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDT Sbjct: 805 QSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDT 864 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRL+KALEDLSIQYD++VRNA G IVQF YGDDG+D Sbjct: 865 AVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMD 911 >ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Solanum tuberosum] Length = 1243 Score = 910 bits (2353), Expect(2) = 0.0 Identities = 456/659 (69%), Positives = 535/659 (81%), Gaps = 8/659 (1%) Frame = -1 Query: 2656 QQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLD 2477 Q + TK+PYIED GPRK+ SIKFSL SE+EI K AEV+++ YY+ +KKPI++GLLD Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64 Query: 2476 SRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILL 2297 RMGPPNKNG C TCHG+F +CPGHYGYL L LPVYNVGYL + +ILKCICK CS ILL Sbjct: 65 PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124 Query: 2296 AEIPRKDYLRRMRTQKIA-QKKTDMQKIIIKTCNTPG----LKNCSRCGYVNGIVKKATG 2132 + R+D L++MR + KK+++ K ++K CN CS+CGY+NG+VKK Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKL-- 182 Query: 2131 MLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVL 1952 L I H++ ++ ++E A+S K + R SV++ L P V SLFK M DEDCE+L Sbjct: 183 QLKITHEQG---NRILDEINVAISD-KRELRASVSVPPELDPKVVYSLFKNMSDEDCELL 238 Query: 1951 YLADRPEKLIITSIAVPPTVIRPSVLV-GGTRSNENDITERLKRIIQANARVRTMLDGTN 1775 YL+DRPEKL++TSI VPP IRPSV V GGT+SNENDITERLKRIIQANA + + ++ Sbjct: 239 YLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSS 298 Query: 1774 --RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVE 1601 +S W LQ+EVAQYINS +GVP HMQA RPLSGF QRLKGKQGRFR NLS KRVE Sbjct: 299 PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVE 358 Query: 1600 FTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLA 1421 +TGRTVISPDPNLKITEV +PILMAQ LT+PERV+ HNIEKLRQCVRNG NKYPGAKF+ Sbjct: 359 YTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIR 418 Query: 1420 FPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPW 1241 PDGS++SLMF RKR+ADELK GYIVDRHLEDGD+VLFNRQPSLHRMSIMSHRA+IMPW Sbjct: 419 HPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 478 Query: 1240 RTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQ 1061 RTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPK+GEILVASTQ Sbjct: 479 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQ 538 Query: 1060 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVR 881 DFLTSSFLITRKDTFY+RA+FSL+CSYMGD MD DLP+P KP+ELWTGKQLF +L+R Sbjct: 539 DFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLR 598 Query: 880 PNASLRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 P + +RVYVNLTVTEK+++ + +TMCP+DGFVYFRNSELISGQLGKATLGNG+K+G Sbjct: 599 PYSKMRVYVNLTVTEKSYS---GKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDG 654 Score = 354 bits (908), Expect(2) = 0.0 Identities = 171/227 (75%), Positives = 193/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDV PGE+L QK +I+ Y KC++ I +++GKL + G Sbjct: 674 RLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPG 733 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE +T LN +R+ G +CM L WRNSPLIMSQCGSKGSPINISQMIACVGQ Sbjct: 734 CDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVGQ 793 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAP+GFIDRSLPHFP SK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDT Sbjct: 794 QSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDT 853 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDL++ YD TVRNA+ IVQF YGDDG+D Sbjct: 854 AVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 910 bits (2353), Expect(2) = 0.0 Identities = 456/659 (69%), Positives = 535/659 (81%), Gaps = 8/659 (1%) Frame = -1 Query: 2656 QQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLD 2477 Q + TK+PYIED GPRK+ SIKFSL SE+EI K AEV+++ YY+ +KKPI++GLLD Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64 Query: 2476 SRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILL 2297 RMGPPNKNG C TCHG+F +CPGHYGYL L LPVYNVGYL + +ILKCICK CS ILL Sbjct: 65 PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124 Query: 2296 AEIPRKDYLRRMRTQKIA-QKKTDMQKIIIKTCNTPG----LKNCSRCGYVNGIVKKATG 2132 + R+D L++MR + KK+++ K ++K CN CS+CGY+NG+VKK Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKL-- 182 Query: 2131 MLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVL 1952 L I H++ ++ ++E A+S K + R SV++ L P V SLFK M DEDCE+L Sbjct: 183 QLKITHEQG---NRILDEINVAISD-KRELRASVSVPPELDPKVVYSLFKNMSDEDCELL 238 Query: 1951 YLADRPEKLIITSIAVPPTVIRPSVLV-GGTRSNENDITERLKRIIQANARVRTMLDGTN 1775 YL+DRPEKL++TSI VPP IRPSV V GGT+SNENDITERLKRIIQANA + + ++ Sbjct: 239 YLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSS 298 Query: 1774 --RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVE 1601 +S W LQ+EVAQYINS +GVP HMQA RPLSGF QRLKGKQGRFR NLS KRVE Sbjct: 299 PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVE 358 Query: 1600 FTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLA 1421 +TGRTVISPDPNLKITEV +PILMAQ LT+PERV+ HNIEKLRQCVRNG NKYPGAKF+ Sbjct: 359 YTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIR 418 Query: 1420 FPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPW 1241 PDGS++SLMF RKR+ADELK GYIVDRHLEDGD+VLFNRQPSLHRMSIMSHRA+IMPW Sbjct: 419 HPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 478 Query: 1240 RTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQ 1061 RTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPK+GEILVASTQ Sbjct: 479 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQ 538 Query: 1060 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVR 881 DFLTSSFLITRKDTFY+RA+FSL+CSYMGD MD DLP+P KP+ELWTGKQLF +L+R Sbjct: 539 DFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLR 598 Query: 880 PNASLRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 P + +RVYVNLTVTEK+++ + +TMCP+DGFVYFRNSELISGQLGKATLGNG+K+G Sbjct: 599 PYSKMRVYVNLTVTEKSYS---GKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDG 654 Score = 354 bits (908), Expect(2) = 0.0 Identities = 171/227 (75%), Positives = 193/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDV PGE+L QK +I+ Y KC++ I +++GKL + G Sbjct: 674 RLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPG 733 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE +T LN +R+ G +CM L WRNSPLIMSQCGSKGSPINISQMIACVGQ Sbjct: 734 CDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVGQ 793 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAP+GFIDRSLPHFP SK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDT Sbjct: 794 QSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDT 853 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDL++ YD TVRNA+ IVQF YGDDG+D Sbjct: 854 AVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum lycopersicum] Length = 1390 Score = 904 bits (2335), Expect(2) = 0.0 Identities = 452/659 (68%), Positives = 534/659 (81%), Gaps = 8/659 (1%) Frame = -1 Query: 2656 QQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLD 2477 Q++ TK+PYIED GPRK+ SIKFSL SE+EI K AEV+++ YY+ +KKPI++GLLD Sbjct: 5 QESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNGLLD 64 Query: 2476 SRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILL 2297 RMGPPNK+G C TCHG+F +CPGHYGYL L LPVYNVGYL + +ILKCICK CS ILL Sbjct: 65 PRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124 Query: 2296 AEIPRKDYLRRMRTQKIA-QKKTDMQKIIIKTCNTPG----LKNCSRCGYVNGIVKKATG 2132 + R+D L++MR + KK+++ K ++K CN CS+CGY+NG+VKK Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMVKKL-- 182 Query: 2131 MLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVL 1952 L I H++ ++ ++E A+S K + R SV++ + P V SLFK M DEDCE+L Sbjct: 183 QLKITHEQG---NRILDEINVAISD-KRELRASVSVPPEIDPKVVYSLFKNMSDEDCELL 238 Query: 1951 YLADRPEKLIITSIAVPPTVIRPSVLV-GGTRSNENDITERLKRIIQANARVRTMLDGTN 1775 YL+DRPEKL++TSI VPP IRPSV V GGT+SNENDITERLKRIIQANA + + ++ Sbjct: 239 YLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSS 298 Query: 1774 --RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVE 1601 +S W LQ+EVAQYINS +GVP MQ PRPLSGF QRLKGKQGRFR NLS KRVE Sbjct: 299 PVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVE 358 Query: 1600 FTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLA 1421 +TGRTVISPDPNLKITEV +PILMAQ LT+PERV+ HNIEKLRQCVRNG NKYPGAKF+ Sbjct: 359 YTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIR 418 Query: 1420 FPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPW 1241 PDG+++SLMF RKRYADELK GYIVDRHLEDGD+VLFNRQPSLHRMSIMSHRA+IMPW Sbjct: 419 HPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 478 Query: 1240 RTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQ 1061 RTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPK+GEILVASTQ Sbjct: 479 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQ 538 Query: 1060 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVR 881 DFLTSSFLITRKDTFY+RA+FSL+CSYMGD MD DLP+P KP+ELWTGKQLF VL+R Sbjct: 539 DFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLR 598 Query: 880 PNASLRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 P + +RVYVNLT+TEK+++ + +TMC +DGFVYFRNSELISGQLGKATLGNG+K+G Sbjct: 599 PYSKMRVYVNLTLTEKSYS---GKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDG 654 Score = 354 bits (908), Expect(2) = 0.0 Identities = 171/227 (75%), Positives = 193/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDV PGE+L QK +I+ Y KC++ I +++GKL + G Sbjct: 674 RLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPG 733 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE +T LN +R+ G +CM L WRNSPLIMSQCGSKGSPINISQMIACVGQ Sbjct: 734 CDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVGQ 793 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAP+GFIDRSLPHFP SK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDT Sbjct: 794 QSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDT 853 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDL++ YD TVRNA+ IVQF YGDDG+D Sbjct: 854 AVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900 >ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata] Length = 1376 Score = 895 bits (2312), Expect(2) = 0.0 Identities = 450/663 (67%), Positives = 525/663 (79%), Gaps = 10/663 (1%) Frame = -1 Query: 2662 ETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGL 2483 ET+ FTK+PYIED GP K+ SI FS+ S+ E+ K AEVQ+WK YY+ + KP E+GL Sbjct: 2 ETKMEIEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGL 61 Query: 2482 LDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRI 2303 LD+RMGPPNK IC TC G+F CPGHYGYL L+LPVYNVG+ N I +ILKCICK CS + Sbjct: 62 LDARMGPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNM 121 Query: 2302 LLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKN---CSRCGYVNGIVKKAT 2135 LL E +D+LR+MR K+ KKT++ K ++K C+T + C +CGY+NG+VKK Sbjct: 122 LLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIA 181 Query: 2134 GMLGI--IHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDC 1961 +GI HDRSKI V+EC++A+SH KE +R + Y+L P VL LFK M D+DC Sbjct: 182 AQMGIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDC 241 Query: 1960 EVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDG 1781 E+LY+A RPE LI T + VPP IRPSV++GGTRSNENDITERLK IIQ NA + +L Sbjct: 242 ELLYIAHRPENLITTCMLVPPLSIRPSVMIGGTRSNENDITERLKLIIQNNACLHRILSQ 301 Query: 1780 TNRSQTD---WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAK 1610 S + W+ +Q EVA+YINS +GV + PLSG +QRLKGKQGRFR NLS K Sbjct: 302 PTTSPKNMQVWDTVQSEVAKYINSEVRGVQ-NQPEKTPLSGLLQRLKGKQGRFRANLSGK 360 Query: 1609 RVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAK 1430 RVE+TGRTVISPDPNLKITEVG+PILMA+ LTFPE V+ HNIEKLRQCVRNG NKYPGA+ Sbjct: 361 RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420 Query: 1429 FLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1250 + +PDGS +L+ RKR ADEL IG IVDRHLE+GD VLFNRQPSLHRMSIM HRA+I Sbjct: 421 NVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 480 Query: 1249 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVA 1070 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+TLMGVQNNLCTPKNGEILVA Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540 Query: 1069 STQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSV 890 STQDFLT+SFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTPTI KPIELWTGKQLFSV Sbjct: 541 STQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSV 600 Query: 889 LVRPNASLRVYVNLTVTEKTFTKSWKR-EKTMCPNDGFVYFRNSELISGQLGKATLGNGD 713 L+RPNAS+RVYV L V EK F K ++TMC NDG+VYFRNSELISGQLGKATLGNG+ Sbjct: 601 LLRPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGN 660 Query: 712 KNG 704 K+G Sbjct: 661 KDG 663 Score = 357 bits (916), Expect(2) = 0.0 Identities = 173/227 (76%), Positives = 194/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIG HGFSIGIDDVQPGE L+ ++ D I GY +C I+ ++ G L+L G Sbjct: 683 RLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFGYDQCHRKIEEFNRGNLQLKAG 742 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 D A++LE ITG LNTIRE TG CM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 743 LDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 802 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 Q+V G RAP+GFIDRSLPHFPR SK+PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 803 QTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 862 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA TGYM+RRLMKALEDL + YD+TVRNA+G I+QF YGDDG+D Sbjct: 863 AVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMD 909 >ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum] gi|557101978|gb|ESQ42341.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum] Length = 1375 Score = 890 bits (2300), Expect(2) = 0.0 Identities = 445/664 (67%), Positives = 530/664 (79%), Gaps = 11/664 (1%) Frame = -1 Query: 2662 ETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGL 2483 ET+ FTK+PYIED GP K+ SI FS+ S+ EI K AEVQ+W+ YY+ + KP+E GL Sbjct: 2 ETKMEIEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGL 61 Query: 2482 LDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRI 2303 LD RMGPPNK ICATCH DF CPGH+GYL L+LPVYNVG+LN I +ILKCICK CS I Sbjct: 62 LDPRMGPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNI 121 Query: 2302 LLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCN---TPGLKNCSRCGYVNGIVKKAT 2135 L+ E +D+L++MR K+ KKT++ K ++K C+ + + C CGY+NG+VKK Sbjct: 122 LIDEKLYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMASQRIITCKNCGYLNGMVKKVA 181 Query: 2134 ---GMLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVN-MVYMLTPAKVLSLFKKMLDE 1967 G++GI HDRSKI V+E ++A+SH +E S G++N + Y+L P VL LFK M D+ Sbjct: 182 AQMGIIGISHDRSKIHGGEVDEFKSAISHTRE-STGAINPLTYVLDPNLVLGLFKGMSDK 240 Query: 1966 DCEVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTML 1787 DCE+LY+A RPE L I + VPP RPSV +GGT+SNEND+TER+K+I+Q NA + +L Sbjct: 241 DCELLYIAHRPENLFIICMFVPPLPTRPSVRIGGTQSNENDLTERVKKILQDNASCKKIL 300 Query: 1786 DGTNRSQTD---WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLS 1616 + S + W+ +Q EVAQYINS +G+P + +PLSG +QRLKGKQGRFR NLS Sbjct: 301 NQATTSPKNMQVWDTVQSEVAQYINSEVRGIPNQPDS-KPLSGILQRLKGKQGRFRANLS 359 Query: 1615 AKRVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPG 1436 KRVE+TGRTVISPDPNLKITEVG+PILMA+ LTFPE V+ HNIEKLRQCVRNG NKYPG Sbjct: 360 GKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPG 419 Query: 1435 AKFLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRA 1256 A+ + +PDGS +L+ RKR ADEL IG IVDRHLE+GD VLFNRQPSLHRMSIM HRA Sbjct: 420 ARSVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRA 479 Query: 1255 KIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEIL 1076 +IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+TLMGVQNNLCTPKNGEIL Sbjct: 480 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEIL 539 Query: 1075 VASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLF 896 VASTQDFLTSS+LITRKDTFYDRAAFSL+CSYMGD MD +DLPTPTI KPIELWTGKQ+F Sbjct: 540 VASTQDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVF 599 Query: 895 SVLVRPNASLRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNG 716 SVL+RPNAS+RVYV L V EK F K K ++TMC NDG+VYFRNSELISGQLGKATLGNG Sbjct: 600 SVLLRPNASVRVYVTLNVKEKNFKKG-KYDETMCTNDGWVYFRNSELISGQLGKATLGNG 658 Query: 715 DKNG 704 +K+G Sbjct: 659 NKDG 662 Score = 351 bits (900), Expect(2) = 0.0 Identities = 171/227 (75%), Positives = 193/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIG HGFS+GIDDVQPGE L ++ IN+GY C I+ +++G+L+L G Sbjct: 682 RLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGYEDCGLKIRDFNEGRLQLKAG 741 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 D A++LE ITG LN IRE TG +CM LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 742 LDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 801 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 Q+V G RAP+GFIDRSLPHFPR SKTP AKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 802 QTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 861 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA TGYM+RRLMKALEDL + YD+TVRNA+G I+QF YGDDG+D Sbjct: 862 AVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMD 908 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis sativus] Length = 1400 Score = 890 bits (2300), Expect(2) = 0.0 Identities = 454/659 (68%), Positives = 523/659 (79%), Gaps = 12/659 (1%) Frame = -1 Query: 2644 LFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSRMG 2465 +FTK+PYIED GPRK+ S++F+ S AEI K AEVQ++K YYD ++KPI+ GLLD RMG Sbjct: 10 VFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMG 69 Query: 2464 PPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAEIP 2285 P NK CATCH +F CPGHYGY+ L LPV+NVGY I ILKCICKSCSRILL E Sbjct: 70 PANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKL 129 Query: 2284 RKDYLRRMRTQKI-AQKKTDMQKIIIKTCNTPGLKN----CSRCGYVNGIVKKATGMLGI 2120 KD+LR+MR K+ A +K D+ K IIK C+T N CSRCGY+NG VKKA MLGI Sbjct: 130 FKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLGI 189 Query: 2119 IHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVY-MLTPAKVLSLFKKMLDEDCEVLYLA 1943 +H R++ D V + E R N+ +L P +VL LF++M DEDCE+L+L+ Sbjct: 190 LHYRARSKDAGV---------VSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELLFLS 240 Query: 1942 DRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDGTN---R 1772 +RPEKLIIT++ VPP IRPSV++ G++SNENDITERLKRIIQ NA V L +N + Sbjct: 241 NRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQAK 300 Query: 1771 SQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFTG 1592 W+ LQ EVAQ INS +G+P MQ +PL+GFVQRLKGKQGRFR NL KRVEFTG Sbjct: 301 CLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTG 360 Query: 1591 RTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFPD 1412 RTVISPDPNLKITEV VPI MA+ LT+PERVT HNIEKLRQCV NG +KYPGA+ L D Sbjct: 361 RTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLD 420 Query: 1411 GSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTL 1232 GS SLM GRKR ADELK G IV+RHLEDGDVVLFNRQPSLHRMSIM HR ++MPWRTL Sbjct: 421 GSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTL 480 Query: 1231 RFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFL 1052 RFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+ LMGVQNNLCTPKNGEILVASTQDFL Sbjct: 481 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFL 540 Query: 1051 TSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPNA 872 TSSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLPTP + KPIELWTGKQLFSVLVRP+A Sbjct: 541 TSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHA 600 Query: 871 SLRVYVNLTVTEKTFTK---SWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 S++VY+NLTV EK+++K + K +TMCPNDGFVYFRNSELISGQ+GKATLGNG+K+G Sbjct: 601 SMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDG 659 Score = 361 bits (927), Expect(2) = 0.0 Identities = 179/227 (78%), Positives = 194/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQPG+ L +K I EGY CD+ I ++ G L G Sbjct: 679 RLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAG 738 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQ+LE +IT LN IRE T +VCM LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 739 CDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 798 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAP+GFIDRSLPHF R +KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 799 QSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 858 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRL+KALEDLSI YD +VRNA G IVQF YGDDG+D Sbjct: 859 AVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMD 905 >ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella] gi|482548169|gb|EOA12363.1| hypothetical protein CARUB_v10025743mg [Capsella rubella] Length = 1376 Score = 887 bits (2293), Expect(2) = 0.0 Identities = 444/663 (66%), Positives = 526/663 (79%), Gaps = 10/663 (1%) Frame = -1 Query: 2662 ETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGL 2483 ET+ +TK+PYIED G K+ SI FS+ S+ E+ K AEVQ+WK +YYD + KP E GL Sbjct: 2 ETKMEIEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGL 61 Query: 2482 LDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRI 2303 LD RMGPPNK IC TC G+F CPGHYGYL L+LPVYN+GY N I +ILKCICK CS + Sbjct: 62 LDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNM 121 Query: 2302 LLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKN---CSRCGYVNGIVKKAT 2135 LL E +D+LR+MR K+ KKT++ K ++K C+T + C +CGY+NG+VKK Sbjct: 122 LLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIP 181 Query: 2134 GMLGI--IHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDC 1961 +GI HDRSKI V+E +AA+SHIKE ++ + Y+L P VL LFK M D+DC Sbjct: 182 AQMGIGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDC 241 Query: 1960 EVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDG 1781 E+LY+A RPE LIIT + VPP IRPSV+VGG++SNEND++ RLK+IIQ NA + +L Sbjct: 242 ELLYIAHRPENLIITCMLVPPLSIRPSVMVGGSQSNENDLSARLKQIIQDNASLHRILSQ 301 Query: 1780 TNRSQTD---WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAK 1610 S + W+ +Q EVA+YINS +GV + +P+SG +QRLKGKQGRFR NLS K Sbjct: 302 PTTSAKNMQVWDTVQSEVAKYINSEVRGVQNQPDS-KPMSGILQRLKGKQGRFRANLSGK 360 Query: 1609 RVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAK 1430 RVE+TGRTVISPDPNLKITEVG+PILMA+ LTFPE V+ HNIEKLRQCVRNG NKYPGA+ Sbjct: 361 RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420 Query: 1429 FLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1250 + +PDGS +L+ RKR ADEL IG IVDRHLE+GD VLFNRQPSLHRMSIM HRA+I Sbjct: 421 NVRYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 480 Query: 1249 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVA 1070 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+TLMGVQNNLCTPKNGEILVA Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540 Query: 1069 STQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSV 890 STQDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTPT+ KPIELWTGKQ+FSV Sbjct: 541 STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSV 600 Query: 889 LVRPNASLRVYVNLTVTEKTFTK-SWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGD 713 L+RPNAS+RVYV L V EK F K + ++TMC NDG+VYFRNSELISGQLGKATLGNG+ Sbjct: 601 LLRPNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGN 660 Query: 712 KNG 704 K+G Sbjct: 661 KDG 663 Score = 359 bits (922), Expect(2) = 0.0 Identities = 176/227 (77%), Positives = 192/227 (84%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIG HGFSIGIDDVQPGE LS Q+ D I GY C I+ ++ G L+L G Sbjct: 683 RLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQSGYDDCHSIIENFNRGNLQLKAG 742 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 D A+TLE ITG LNTIRE TG CM LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 743 LDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 802 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 Q+V G RAP+GFIDRSLPHFPR SK+PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 803 QTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 862 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA TGYM+RRLMKALEDL + YD+TVRNA+G I+QF YGDDG+D Sbjct: 863 AVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMD 909 >dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana] Length = 1383 Score = 887 bits (2292), Expect(2) = 0.0 Identities = 444/663 (66%), Positives = 521/663 (78%), Gaps = 10/663 (1%) Frame = -1 Query: 2662 ETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGL 2483 ET+ FTK+PYIED GP K+ SI FS+ S+ E+ K AEVQ+W YD S KP E+GL Sbjct: 2 ETKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGL 61 Query: 2482 LDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRI 2303 LD RMGPPNK IC TC G+F CPGHYGYL L+LPVYNVGY N I +ILKCICK CS + Sbjct: 62 LDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNM 121 Query: 2302 LLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKN---CSRCGYVNGIVKKAT 2135 LL E +D+LR+MR ++ KKT++ K ++K C+T + C +CGY+NG+VKK Sbjct: 122 LLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIA 181 Query: 2134 GM--LGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDC 1961 +GI HDRSKI ++EC++A+SH K+ + + Y+L P VL LFK+M D+DC Sbjct: 182 AQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDC 241 Query: 1960 EVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDG 1781 E+LY+A RPE LIIT + VPP IRPSV++GG +SNEND+T RLK+II NA + +L Sbjct: 242 ELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKILSQ 301 Query: 1780 TNRSQTD---WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAK 1610 S + W+ +QIEVA+YINS +G + PLSG +QRLKGK GRFR NLS K Sbjct: 302 PTSSPKNMQVWDTVQIEVARYINSEVRGCQ-NQPEEHPLSGILQRLKGKGGRFRANLSGK 360 Query: 1609 RVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAK 1430 RVEFTGRTVISPDPNLKITEVG+PILMAQ LTFPE V+ HNIEKLRQCVRNG NKYPGA+ Sbjct: 361 RVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420 Query: 1429 FLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1250 + +PDGS +L+ RKR ADEL IG IVDRHL++GDVVLFNRQPSLHRMSIM HRA+I Sbjct: 421 NVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARI 480 Query: 1249 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVA 1070 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+TLMGVQNNLCTPKNGEILVA Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540 Query: 1069 STQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSV 890 STQDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTPTI KPIELWTGKQ+FSV Sbjct: 541 STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSV 600 Query: 889 LVRPNASLRVYVNLTVTEKTFTKSWKR-EKTMCPNDGFVYFRNSELISGQLGKATLGNGD 713 L+RPNAS+RVYV L V EK F K ++TMC NDG+VYFRNSELISGQLGKATLGNG+ Sbjct: 601 LLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGN 660 Query: 712 KNG 704 K+G Sbjct: 661 KDG 663 Score = 358 bits (919), Expect(2) = 0.0 Identities = 174/227 (76%), Positives = 194/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIG HGFSIGIDDVQPGE LS ++ D I GY +C I+ ++ G L+L G Sbjct: 683 RLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAG 742 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 D A++LE ITG LNTIRE TG CM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 743 LDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 802 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 Q+V G RAP+GFIDRSLPHFPR SK+PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 803 QTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 862 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA TGYM+RRLMKALEDL + YD+TVRNA+G I+QF YGDDG+D Sbjct: 863 AVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMD 909 >ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana] gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1 [Arabidopsis thaliana] Length = 1376 Score = 887 bits (2292), Expect(2) = 0.0 Identities = 444/663 (66%), Positives = 521/663 (78%), Gaps = 10/663 (1%) Frame = -1 Query: 2662 ETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGL 2483 ET+ FTK+PYIED GP K+ SI FS+ S+ E+ K AEVQ+W YD S KP E+GL Sbjct: 2 ETKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGL 61 Query: 2482 LDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRI 2303 LD RMGPPNK IC TC G+F CPGHYGYL L+LPVYNVGY N I +ILKCICK CS + Sbjct: 62 LDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNM 121 Query: 2302 LLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKN---CSRCGYVNGIVKKAT 2135 LL E +D+LR+MR ++ KKT++ K ++K C+T + C +CGY+NG+VKK Sbjct: 122 LLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIA 181 Query: 2134 GM--LGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDC 1961 +GI HDRSKI ++EC++A+SH K+ + + Y+L P VL LFK+M D+DC Sbjct: 182 AQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDC 241 Query: 1960 EVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDG 1781 E+LY+A RPE LIIT + VPP IRPSV++GG +SNEND+T RLK+II NA + +L Sbjct: 242 ELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKILSQ 301 Query: 1780 TNRSQTD---WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAK 1610 S + W+ +QIEVA+YINS +G + PLSG +QRLKGK GRFR NLS K Sbjct: 302 PTSSPKNMQVWDTVQIEVARYINSEVRGCQ-NQPEEHPLSGILQRLKGKGGRFRANLSGK 360 Query: 1609 RVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAK 1430 RVEFTGRTVISPDPNLKITEVG+PILMAQ LTFPE V+ HNIEKLRQCVRNG NKYPGA+ Sbjct: 361 RVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420 Query: 1429 FLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1250 + +PDGS +L+ RKR ADEL IG IVDRHL++GDVVLFNRQPSLHRMSIM HRA+I Sbjct: 421 NVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARI 480 Query: 1249 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVA 1070 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+TLMGVQNNLCTPKNGEILVA Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540 Query: 1069 STQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSV 890 STQDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTPTI KPIELWTGKQ+FSV Sbjct: 541 STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSV 600 Query: 889 LVRPNASLRVYVNLTVTEKTFTKSWKR-EKTMCPNDGFVYFRNSELISGQLGKATLGNGD 713 L+RPNAS+RVYV L V EK F K ++TMC NDG+VYFRNSELISGQLGKATLGNG+ Sbjct: 601 LLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGN 660 Query: 712 KNG 704 K+G Sbjct: 661 KDG 663 Score = 358 bits (919), Expect(2) = 0.0 Identities = 174/227 (76%), Positives = 194/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIG HGFSIGIDDVQPGE LS ++ D I GY +C I+ ++ G L+L G Sbjct: 683 RLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAG 742 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 D A++LE ITG LNTIRE TG CM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 743 LDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 802 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 Q+V G RAP+GFIDRSLPHFPR SK+PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 803 QTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 862 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA TGYM+RRLMKALEDL + YD+TVRNA+G I+QF YGDDG+D Sbjct: 863 AVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMD 909 >ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 1394 Score = 886 bits (2289), Expect(2) = 0.0 Identities = 447/662 (67%), Positives = 524/662 (79%), Gaps = 12/662 (1%) Frame = -1 Query: 2653 QTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDS 2474 Q ++TK+PYIED GPR++ SI+FS S ++I K +E Q+ YYD +KK I GLLD+ Sbjct: 6 QDIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDT 65 Query: 2473 RMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLA 2294 RMG PNK+G C TC G FT CPGH+GYL L LPVYNVGYL+ I +ILKCICKSCSR+L+ Sbjct: 66 RMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVD 125 Query: 2293 EIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKN---CSRCGYVNGIVKKATGML 2126 E RK YL+RMR + KK ++ K I+K C++ C RCGY+NG+VKKA ++ Sbjct: 126 EKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAGSVV 185 Query: 2125 GIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVLYL 1946 GIIHDRSK+ D +EEC++A+ H +E Y+L P +VLSLF++M++EDCE+LYL Sbjct: 186 GIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYL 245 Query: 1945 ADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRT-MLDGTN-- 1775 RPEKLIIT+IAVPP IRPSV G++SNENDITERLK+IIQ NA++R +L+G Sbjct: 246 QGRPEKLIITTIAVPPISIRPSVFTEGSQSNENDITERLKQIIQFNAKLRLELLEGRRTG 305 Query: 1774 -RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEF 1598 + W+ LQ V YINS + +P MQ RPLSGFVQRL GKQGRFRQNL+ KRVEF Sbjct: 306 IKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEF 364 Query: 1597 TGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAF 1418 TGRTVISPDPNLKITEV +PI MA+ LT+PERVT HNIEKLRQCV NGS KYPGA+ + + Sbjct: 365 TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTY 424 Query: 1417 PDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWR 1238 PDGS L RKR A+ELK G IV RHLEDGDVVLFNRQPSLHRMSIM HRA+IMPWR Sbjct: 425 PDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 484 Query: 1237 TLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQD 1058 TLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA LMGVQNNLCTPKNGEILVASTQD Sbjct: 485 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQD 544 Query: 1057 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRP 878 FLTSSFLITRKDTFYDRAAFSLMCSYM DGMD VDLPTP++ KPIELWTGKQLFSVL+RP Sbjct: 545 FLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRP 604 Query: 877 NASLRVYVNLTVTEKTFTKSWKREK----TMCPNDGFVYFRNSELISGQLGKATLGNGDK 710 +A++RVYVNL + EK +++ K K TMCPNDG+VYFRNSELISGQLGKATLGNG+K Sbjct: 605 HANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNK 664 Query: 709 NG 704 +G Sbjct: 665 DG 666 Score = 372 bits (955), Expect(2) = 0.0 Identities = 181/227 (79%), Positives = 196/227 (86%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQPG+ L +K I+ GY C++ I Y+ G+L L G Sbjct: 686 RLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNGYRHCNKLIADYNGGRLALKSG 745 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDA QTLE IT +LN +RE GDVCM ELHWRNSPLIMSQCGSKGSPINISQMIACVGQ Sbjct: 746 CDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 805 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGG RAP+GFIDRSLPHFPR SKTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDT Sbjct: 806 QSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDT 865 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYMARRL K LEDL +QYD+TV++A GGIVQF YGDDGLD Sbjct: 866 AVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFLYGDDGLD 912 >ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Cicer arietinum] Length = 1399 Score = 877 bits (2265), Expect(2) = 0.0 Identities = 442/661 (66%), Positives = 516/661 (78%), Gaps = 5/661 (0%) Frame = -1 Query: 2671 VNPETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIE 2492 +N + +FTKEP+IED GPRK+ I +S SEAEI K EVQ+WK YYD +KP Sbjct: 1 MNRSRTEGLVFTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEA 60 Query: 2491 SGLLDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSC 2312 GLLDSRMGP NK+ +CATCHG+F C GHYGYLPL PV+NVGYLN + ILKCICK C Sbjct: 61 DGLLDSRMGPANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGC 120 Query: 2311 SRILLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKNCSRCGYVNGIVKKAT 2135 + ILL E RK YL++MR K+ + +K + + I+K + C RCGY+NGIVK Sbjct: 121 AGILLDEDTRKKYLKKMRNSKLDELQKIQLLESIMKRFRSAKFIKCQRCGYINGIVKLTR 180 Query: 2134 GMLGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEV 1955 L I+HD S + V E ++A+SH+KE + L P V SLF KM DEDC + Sbjct: 181 STLRIVHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCAL 240 Query: 1954 LYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDGTN 1775 LYLA+RPEKLIIT+IAVPP VIRPSV++ G++SNENDITE+L++IIQANA + L+ + Sbjct: 241 LYLAERPEKLIITNIAVPPIVIRPSVIMDGSQSNENDITEKLRKIIQANAALHKELEEST 300 Query: 1774 RSQTDWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFT 1595 + Q +E LQ VAQYINS KG P MQA +PL+GFVQR+KGKQGRFR NLS KRVE+T Sbjct: 301 KFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYT 360 Query: 1594 GRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFP 1415 GRTVISPDPNLKITEV +PI MA+ LT+PERVT HNIEKLRQC+RNG +KYPGAK L Sbjct: 361 GRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHA 420 Query: 1414 DGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRT 1235 G+ +L RKR ADEL+ G IVDRHLEDGDVVLFNRQPSLHRMS+M HRA+IMPWRT Sbjct: 421 GGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRT 480 Query: 1234 LRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDF 1055 LRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEAL LM VQNNLCTPKNGEILVASTQDF Sbjct: 481 LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDF 540 Query: 1054 LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPN 875 LTSSFLITRKDTFYDR+ FSL+CSYMGDGMD +DLPTP I KP+ELW+GKQLFS+L+RP+ Sbjct: 541 LTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPH 600 Query: 874 ASLRVYVNLTVTEKTFTKSW---KRE-KTMCPNDGFVYFRNSELISGQLGKATLGNGDKN 707 A++RVYVNLTV EKT KRE KTMCPNDGFVYFRNSELISGQLGK TLGNG+K+ Sbjct: 601 ANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNGNKD 660 Query: 706 G 704 G Sbjct: 661 G 661 Score = 360 bits (923), Expect(2) = 0.0 Identities = 174/227 (76%), Positives = 196/227 (86%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAK SARWIGNHGFSIGIDDVQP E L +K + I GYS+CD FI+A++ GKLEL G Sbjct: 681 RLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETITTGYSECDGFIEAFNKGKLELAPG 740 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE +I +LN++R+TT VCM LHWRNSPLIMSQCGSKGSPINI QM+ACVGQ Sbjct: 741 CDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPLIMSQCGSKGSPINICQMVACVGQ 800 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGG RA NGF+DRSLPHF + +KTPA KGFVANSF++GL+ATEFFFHTMGGREGLVDT Sbjct: 801 QSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSFFTGLSATEFFFHTMGGREGLVDT 860 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDL + YD TVR+ NGGIVQF YGDDG+D Sbjct: 861 AVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQFCYGDDGMD 907 >ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris] gi|561005141|gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris] Length = 1392 Score = 876 bits (2264), Expect(2) = 0.0 Identities = 442/654 (67%), Positives = 526/654 (80%), Gaps = 8/654 (1%) Frame = -1 Query: 2641 FTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSRMGP 2462 FTKEP++EDAGPRK+ ++KFS+ S++EI K EVQ+WK +YYD KKPI GLLD RMGP Sbjct: 11 FTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70 Query: 2461 PNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAEIPR 2282 NK+ CATCHG+F CPGHYGYL L LPV+NVGYL I ILKCICK C+RILL E R Sbjct: 71 ANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDEDTR 130 Query: 2281 KDYLRRMRTQKIAQ-KKTDMQKI-IIKTCNTPGLKNCSRCGYVNGIVKKATGMLGIIHDR 2108 K +L++MR+ K ++ K D K+ IIK C+ + NC RCGY+NG VKK L I+HD Sbjct: 131 KKHLKKMRSSKKSELDKMDFVKVRIIKDCSK--VVNCPRCGYINGSVKKLPASLIIMHDC 188 Query: 2107 SKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVLYLADRPEK 1928 SK + VEE + +S IK+ + +L P +VLSLF+KMLDEDCE+LY+A+RPEK Sbjct: 189 SKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCELLYVAERPEK 248 Query: 1927 LIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDGTNRSQT---DW 1757 LIIT+I VPP IRPSV++ + SNENDITERLK IIQANA +R L ++ S W Sbjct: 249 LIITNIVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESSVSSKFLDGW 308 Query: 1756 EYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFTGRTVIS 1577 E LQ EVAQ+INS +G+P +MQ+ + L+GFVQRLKGK GRFR NLS KRVE+TGRTVIS Sbjct: 309 EILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVIS 368 Query: 1576 PDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFPDGSKVS 1397 PDPNLKI+EV +PILMA LT+PERVT HNIEKLRQCVRNG +KYPGA+ L G S Sbjct: 369 PDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRDGGHSWS 428 Query: 1396 LMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLRFNES 1217 L RKR ADEL+IG IVDRHLEDGD+VLFNRQPSLHRMSIMSHRA+IMPWRTLRFNES Sbjct: 429 LKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNES 488 Query: 1216 VCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1037 VCNPYNADFDGDEMN+HVPQTE+ARTEA+ LMGVQNNLCTPKNGEILVASTQDFLTSSFL Sbjct: 489 VCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFL 548 Query: 1036 ITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPNASLRVY 857 +TRKDTFYDR+AF+ +C+++GDG+D +DLPTP I KP+ELW+GKQLFS+L+RP+A+ +VY Sbjct: 549 VTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLRPHANFKVY 608 Query: 856 VNLTVTEKTFTK--SWKRE-KTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 VNLTV EKT+TK KRE KT+CPNDGFVYFRN+ELISGQ+GK TLGNG+K+G Sbjct: 609 VNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNKDG 662 Score = 375 bits (963), Expect(2) = 0.0 Identities = 180/227 (79%), Positives = 200/227 (88%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQP E L +K + ++EGY KCD I+A++ GKLELL G Sbjct: 682 RLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEGYKKCDNHIQAFNKGKLELLAG 741 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDA QTLE +ITG LN +R+ G VCM LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 742 CDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 801 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAPNGF+DRSLPHFP N+KTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDT Sbjct: 802 QSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDT 861 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+R+LMK++EDL + YD TVRNA G IVQF YGDDG+D Sbjct: 862 AVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFCYGDDGMD 908 >gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus] Length = 1394 Score = 873 bits (2255), Expect(2) = 0.0 Identities = 437/658 (66%), Positives = 524/658 (79%), Gaps = 9/658 (1%) Frame = -1 Query: 2650 TTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSR 2471 T FTK PY+ED GPR++ SI+FS S AE+ K EV++ K AYYD+++KPI++GLLD R Sbjct: 6 TIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDQR 65 Query: 2470 MGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAE 2291 MGP NK+ +C TC G F CPGHYGYLPL LPVYNVG+ I +ILKCICK+CSR+LLA+ Sbjct: 66 MGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLAD 125 Query: 2290 IPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNT-PGLKN---CSRCGYVNGIVKKATGML 2126 + +L++MR K KK ++QK ++K CN+ G K CSRCGY+NG+VKKA L Sbjct: 126 KDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAKEPL 185 Query: 2125 GIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLSLFKKMLDEDCEVLYL 1946 I HDR+K+ D ++E R+A++H K+ +G+ ++ + P L + MLDEDCE+LYL Sbjct: 186 KIQHDRAKVVDNCLDERRSALAHTKD-IKGNPVVISTIDPKTAYHLLENMLDEDCELLYL 244 Query: 1945 ADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARV-RTMLDGTNRS 1769 DRPEKLI+T+I VPP IRPSV SNENDIT RLK+IIQ NA V + M D +++S Sbjct: 245 HDRPEKLIVTNILVPPIAIRPSVFSTRAMSNENDITSRLKQIIQINAAVLQEMSDQSSQS 304 Query: 1768 QT---DWEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEF 1598 Q+ +W+ LQ+EVAQYINS + + + +PLSGFVQRLKGKQGRFR NLS KRVEF Sbjct: 305 QSLTNNWDSLQVEVAQYINSDVRVPLQYSENTKPLSGFVQRLKGKQGRFRGNLSGKRVEF 364 Query: 1597 TGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAF 1418 TGRTVISPDPNLKI EV VPILMAQ L++PERV+ HNIE+LRQCVRNG KYPGAKF+ Sbjct: 365 TGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPGAKFIKH 424 Query: 1417 PDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWR 1238 PDG+++SL R R AD+LK GYIV RHL+DGD++LFNRQPSLHRMSIMSHRA+IMPWR Sbjct: 425 PDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIMPWR 484 Query: 1237 TLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQD 1058 TLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL LMGVQNNLCTPKNGEILVASTQD Sbjct: 485 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 544 Query: 1057 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRP 878 FLTSS+LITRKDTFYDRA+FSL+CSYMGD MD +DLPTP + KP+ELWTGKQLFS+L+RP Sbjct: 545 FLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSILLRP 604 Query: 877 NASLRVYVNLTVTEKTFTKSWKREKTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 +A +RVYVNLTV EK + KS +TMCP DGFVY RNSELISGQLGKATLGNG K+G Sbjct: 605 HAKMRVYVNLTVAEKNYGKS---GETMCPKDGFVYIRNSELISGQLGKATLGNGSKDG 659 Score = 317 bits (813), Expect(2) = 0.0 Identities = 158/227 (69%), Positives = 180/227 (79%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGI+DVQPG L+ +K I++GY +C ++I +Y G L+LL G Sbjct: 679 RLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQCIDYIGSYKSGSLDLLPG 738 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 C+ A+TLE ITG LN IRE T +VCM LHWRNSPLIMSQC ACVGQ Sbjct: 739 CNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQCDG-----------ACVGQ 787 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRRAPNGF+DR+LPHF R +K P AKGFV NSFY+GL+ATEFFFHTMGGREGLVDT Sbjct: 788 QSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDT 847 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+RRLMKALEDLS+ YD TVRNA+ IVQF YG D +D Sbjct: 848 AVKTADTGYMSRRLMKALEDLSVHYDGTVRNASVCIVQFVYGGDAMD 894 >ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thaliana] gi|332009887|gb|AED97270.1| nuclear RNA polymerase C1 [Arabidopsis thaliana] Length = 1391 Score = 872 bits (2253), Expect(2) = 0.0 Identities = 444/680 (65%), Positives = 521/680 (76%), Gaps = 27/680 (3%) Frame = -1 Query: 2662 ETQQTTLFTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGL 2483 ET+ FTK+PYIED GP K+ SI FS+ S+ E+ K AEVQ+W YD S KP E+GL Sbjct: 2 ETKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGL 61 Query: 2482 LDSRMGPPNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICK----- 2318 LD RMGPPNK IC TC G+F CPGHYGYL L+LPVYNVGY N I +ILKCICK Sbjct: 62 LDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKVTELA 121 Query: 2317 -----SCSRILLAEIPRKDYLRRMRTQKIAQ-KKTDMQKIIIKTCNTPGLKN---CSRCG 2165 CS +LL E +D+LR+MR ++ KKT++ K ++K C+T + C +CG Sbjct: 122 DYVSLRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCG 181 Query: 2164 YVNGIVKKATGM--LGIIHDRSKIADKSVEECRAAVSHIKEQSRGSVNMVYMLTPAKVLS 1991 Y+NG+VKK +GI HDRSKI ++EC++A+SH K+ + + Y+L P VL Sbjct: 182 YLNGMVKKIAAQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLG 241 Query: 1990 LFKKMLDEDCEVLYLADRPEKLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQA 1811 LFK+M D+DCE+LY+A RPE LIIT + VPP IRPSV++GG +SNEND+T RLK+II Sbjct: 242 LFKRMSDKDCELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILG 301 Query: 1810 NARVRTMLDGTNRSQTD---WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQ 1640 NA + +L S + W+ +QIEVA+YINS +G + PLSG +QRLKGK Sbjct: 302 NASLHKILSQPTSSPKNMQVWDTVQIEVARYINSEVRGCQ-NQPEEHPLSGILQRLKGKG 360 Query: 1639 GRFRQNLSAKRVEFTGRTVISPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVR 1460 GRFR NLS KRVEFTGRTVISPDPNLKITEVG+PILMAQ LTFPE V+ HNIEKLRQCVR Sbjct: 361 GRFRANLSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVR 420 Query: 1459 NGSNKYPGAKFLAFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHR 1280 NG NKYPGA+ + +PDGS +L+ RKR ADEL IG IVDRHL++GDVVLFNRQPSLHR Sbjct: 421 NGPNKYPGARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHR 480 Query: 1279 MSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLC 1100 MSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+TLMGVQNNLC Sbjct: 481 MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLC 540 Query: 1099 TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIE 920 TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTPTI KPIE Sbjct: 541 TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIE 600 Query: 919 LWTGKQLFSVLVRPNASLRVYVNLTVTEKTFTKSWKR-EKTMCPNDGFVYFRNSELISGQ 743 LWTGKQ+FSVL+RPNAS+RVYV L V EK F K ++TMC NDG+VYFRNSELISGQ Sbjct: 601 LWTGKQIFSVLLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQ 660 Query: 742 LGKAT-------LGNGDKNG 704 LGKAT LGNG+K+G Sbjct: 661 LGKATLALDIFPLGNGNKDG 680 Score = 358 bits (919), Expect(2) = 0.0 Identities = 174/227 (76%), Positives = 194/227 (85%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIG HGFSIGIDDVQPGE LS ++ D I GY +C I+ ++ G L+L G Sbjct: 700 RLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAG 759 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 D A++LE ITG LNTIRE TG CM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQ Sbjct: 760 LDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQ 819 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 Q+V G RAP+GFIDRSLPHFPR SK+PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT Sbjct: 820 QTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 879 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTA TGYM+RRLMKALEDL + YD+TVRNA+G I+QF YGDDG+D Sbjct: 880 AVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMD 926 >ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine max] Length = 1391 Score = 872 bits (2252), Expect(2) = 0.0 Identities = 440/658 (66%), Positives = 527/658 (80%), Gaps = 12/658 (1%) Frame = -1 Query: 2641 FTKEPYIEDAGPRKVGSIKFSLSSEAEICKGAEVQIWKAAYYDQSKKPIESGLLDSRMGP 2462 FTKEP++ED GPRK+ ++KFS SE+EI K AEVQ+WK +YYD KKPI GLLD RMGP Sbjct: 11 FTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70 Query: 2461 PNKNGICATCHGDFTKCPGHYGYLPLNLPVYNVGYLNIIANILKCICKSCSRILLAEIPR 2282 NK+ +CATC G+F CPGHYGYL L LPV+NVGYL+ I ILKCICK C+RILL E R Sbjct: 71 ANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTR 130 Query: 2281 KDYLRRMRTQKIAQ-KKTDMQKI-IIKTCNTPGLKNCSRCGYVNGIVKKATGMLGIIHDR 2108 K +L++MR+ K ++ K D K+ +IK C+ + NC RCGY+NG VKK L IIHD Sbjct: 131 KKHLKKMRSSKKSELDKIDFVKVRVIKDCSK--VVNCPRCGYINGSVKKLPASLTIIHDC 188 Query: 2107 SKIADKSVEECRAAVSHIKEQSRGSVNMVY-MLTPAKVLSLFKKMLDEDCEVLYLADRPE 1931 SK + VEE +A+S +K+ SR + N+ +L P +VLSLFK+MLDEDCE+LY+A+RPE Sbjct: 189 SKCRNYIVEELDSALSRMKD-SRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAERPE 247 Query: 1930 KLIITSIAVPPTVIRPSVLVGGTRSNENDITERLKRIIQANARVRTMLDGTNRSQT---D 1760 KLI+T++ VPP IRPSV++ + SNENDITERLK IIQANA +R L + S Sbjct: 248 KLIMTNVVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESTFSSKFLDG 307 Query: 1759 WEYLQIEVAQYINSAEKGVPAHMQAPRPLSGFVQRLKGKQGRFRQNLSAKRVEFTGRTVI 1580 W+ LQ EVAQ+INS +G+P +MQ + L+GFVQRLKGK GRFR NLS KRVE+TGRTVI Sbjct: 308 WDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVI 367 Query: 1579 SPDPNLKITEVGVPILMAQTLTFPERVTSHNIEKLRQCVRNGSNKYPGAKFLAFPDGSKV 1400 SPDPNLKI+EV +PI MA+ LT+PERVT HNIEKLRQCVRNG +KYPGA+ L G Sbjct: 368 SPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRDGGHSW 427 Query: 1399 SLMFPGRKRYADELKIGYIVDRHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLRFNE 1220 SL RKR ADEL+IG IVDRHLEDGD+VLFNRQPSLHRMSIM HRA+IMPWRTLRFNE Sbjct: 428 SLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 487 Query: 1219 SVCNPYNADFDGDEMNMHVPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSF 1040 SVCNPYNADFDGDEMN+HVPQTE+ARTEA+ LMGV+NNLCTPKNGEILVASTQDFLTSSF Sbjct: 488 SVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDFLTSSF 547 Query: 1039 LITRKDTFYDRAAFSLMCSYMGDGMDHVDLPTPTIFKPIELWTGKQLFSVLVRPNASLRV 860 LITRKDTFYDR+ FSL+CSY+GDGMD +DLPTP I KP+ELW+GKQLFS+++RP+A++RV Sbjct: 548 LITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPHANMRV 607 Query: 859 YVNLTVTEKTFTKSWKRE------KTMCPNDGFVYFRNSELISGQLGKATLGNGDKNG 704 YVNLTV E+ +T+ K + KT+CPNDGFVYFRNSELISGQ+GK TLGNG+K+G Sbjct: 608 YVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGNGNKDG 665 Score = 379 bits (972), Expect(2) = 0.0 Identities = 184/227 (81%), Positives = 201/227 (88%) Frame = -3 Query: 683 RLAKLSARWIGNHGFSIGIDDVQPGESLSCQKTDKINEGYSKCDEFIKAYSDGKLELLGG 504 RLAKLSARWIGNHGFSIGIDDVQP E L +K + I+EGY +CD+ I+A++ GKLELL G Sbjct: 685 RLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISEGYRECDKHIEAFNKGKLELLAG 744 Query: 503 CDAAQTLEVRITGQLNTIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQ 324 CDAAQTLE RITG LN +R+T G VCM LHWRNSPLIMSQCGSKGS INISQM+ACVGQ Sbjct: 745 CDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSPLIMSQCGSKGSSINISQMVACVGQ 804 Query: 323 QSVGGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDT 144 QSVGGRR PNGFIDRSLPHFPR SKTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDT Sbjct: 805 QSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDT 864 Query: 143 AVKTADTGYMARRLMKALEDLSIQYDDTVRNANGGIVQFRYGDDGLD 3 AVKTADTGYM+R+LMK+LEDL + YD TVRNA G IVQF YGDDG+D Sbjct: 865 AVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQFCYGDDGMD 911