BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00001024
         (669 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33284.3| unnamed protein product [Vitis vinifera]              186   4e-45
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   186   4e-45
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   186   7e-45
emb|CBI36309.3| unnamed protein product [Vitis vinifera]              185   1e-44
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   185   1e-44
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...   174   3e-41
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...   172   9e-41
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   167   2e-39
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas...   164   2e-38
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   164   2e-38
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...   162   9e-38
gb|AFK40562.1| unknown [Lotus japonicus]                              162   1e-37
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6...   161   2e-37
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun...   161   2e-37
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...   158   2e-36
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   157   4e-36
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                          157   4e-36
ref|XP_004303315.1| PREDICTED: DNA-directed RNA polymerase III s...   156   5e-36
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   155   1e-35
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s...   154   2e-35

>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  186 bits (473), Expect = 4e-45
 Identities = 100/228 (43%), Positives = 146/228 (64%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR+Q + L KRKRPDT+   +     E++LYD+IRSKE  GIW+  +  ET +P+    
Sbjct: 62  MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N+++K +K Y+A  FEPS ELTGG WY +G LDTE+I  LK+T
Sbjct: 121 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 179

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C+  + K K AT +GI E + +      + +TQ+ I EI+ +L+L+ E+++V+S+G+GEF
Sbjct: 180 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEF 238

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + IP G  CY+CTN           GA+AS+PCGVCPRI++C+PDG+I
Sbjct: 239 SSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGII 286


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  186 bits (473), Expect = 4e-45
 Identities = 100/228 (43%), Positives = 146/228 (64%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR+Q + L KRKRPDT+   +     E++LYD+IRSKE  GIW+  +  ET +P+    
Sbjct: 1   MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N+++K +K Y+A  FEPS ELTGG WY +G LDTE+I  LK+T
Sbjct: 60  KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 118

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C+  + K K AT +GI E + +      + +TQ+ I EI+ +L+L+ E+++V+S+G+GEF
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEF 177

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + IP G  CY+CTN           GA+AS+PCGVCPRI++C+PDG+I
Sbjct: 178 SSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGII 225


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  186 bits (471), Expect = 7e-45
 Identities = 100/228 (43%), Positives = 145/228 (63%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR+Q + L KRKRPDT+   +     E++LYD+IRSKE  GIW+  +  ET +P+    
Sbjct: 1   MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N+++K +K Y+A  FEPS ELTGG WY +G LDTE+I  LK T
Sbjct: 60  KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C+  + K K AT +GI E + +      + +TQ+ I EI+ +L+L+ E+++V+S+G+GEF
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEF 177

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + IP G  CY+CTN           GA+AS+PCGVCPRI++C+PDG+I
Sbjct: 178 SSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGII 225


>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  185 bits (469), Expect = 1e-44
 Identities = 100/228 (43%), Positives = 144/228 (63%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR+Q   L KRKRPDT+   +     E++LYD+IRSKE  GIW+  +  ET +P+    
Sbjct: 91  MSRSQGLSL-KRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 149

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N+++K +K Y+A  FEPS ELTGG WY +G LDTE+I  LK T
Sbjct: 150 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 208

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C+  + K K AT +GI E + +      + +TQ+ I EI+ +L+L+ E+++V+S+G+GEF
Sbjct: 209 CVKVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEF 267

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + IP G  CY+CTN           GA+AS+PCGVCPRI++C+PDG+I
Sbjct: 268 SSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGII 315


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  185 bits (469), Expect = 1e-44
 Identities = 100/228 (43%), Positives = 144/228 (63%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR+Q   L KRKRPDT+   +     E++LYD+IRSKE  GIW+  +  ET +P+    
Sbjct: 1   MSRSQGLSL-KRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N+++K +K Y+A  FEPS ELTGG WY +G LDTE+I  LK T
Sbjct: 60  KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C+  + K K AT +GI E + +      + +TQ+ I EI+ +L+L+ E+++V+S+G+GEF
Sbjct: 119 CVKVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRALVLDNEIMEVRSSGSGEF 177

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + IP G  CY+CTN           GA+AS+PCGVCPRI++C+PDG+I
Sbjct: 178 SSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGII 225


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score =  174 bits (440), Expect = 3e-41
 Identities = 97/228 (42%), Positives = 140/228 (61%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR Q     KRKRP+ +       + E++LYDVIRSK+  GIW+  +  E K+P+    
Sbjct: 1   MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++NK +K ++AT FEPS E++GG WY +G LDTEFI++LK+ 
Sbjct: 61  KSLKALQVKKLIK-EVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQL 119

Query: 322 CLMGIKDK-AATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C   I+ +  ATL+ + + +    AF+   T Q+ I EI+ +LIL+  +++VKS G GEF
Sbjct: 120 CKRQIERRGVATLEEVTDSINSYPAFNVDVTKQQ-IEEILRTLILDNVIMEVKSNGMGEF 178

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           A IP+G+ CYK  +           GALAS+PCGVCPRIS+C+PDG+I
Sbjct: 179 ASIPFGEVCYKYIS-KVGLGGEPKAGALASIPCGVCPRISQCTPDGII 225


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score =  172 bits (436), Expect = 9e-41
 Identities = 97/228 (42%), Positives = 138/228 (60%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR Q     KRKRP+ +       + E+ILYDVIRSK+  GIW+  +  E K+P+    
Sbjct: 53  MSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 112

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++NK +K ++AT FEPS E++GG WY +G LDTEFI++L++ 
Sbjct: 113 KSLKALRVKNLIK-EVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQL 171

Query: 322 CLMGIKDK-AATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C   I+ K  ATL+ + + +    AF+   T Q+ I EI+ +LIL+  +++VKS G GEF
Sbjct: 172 CKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQ-IEEILRTLILDNAIMEVKSNGMGEF 230

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           A IP+G  CY+  +           GALAS+PCGVCPRIS C+PDG+I
Sbjct: 231 ASIPFGKVCYRYIS-KGALGGEPKAGALASIPCGVCPRISHCTPDGII 277


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  167 bits (424), Expect = 2e-39
 Identities = 95/228 (41%), Positives = 136/228 (59%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           M+R+Q+    KRK+P++        + E  LY+VI SK+  GIW+  +  ET +P+    
Sbjct: 1   MNRSQAL---KRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVN 57

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++NK +K Y+AT FEPS E+TGG WY +G LDTEFI  LK  
Sbjct: 58  KSLKVLQAKNLIK-EVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEV 116

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C   + K K ATL+GI + ++R   F+ + T Q+ I EI+ +L+L+  +++VKS G  EF
Sbjct: 117 CTKQVLKLKVATLEGITDSIKRSGIFNTELTKQQ-IEEIVKALVLDNALIEVKSNGMLEF 175

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + IP G  CYKC             GA+AS+PCGVCPRIS+C+PDG+I
Sbjct: 176 SFIPIGKVCYKCVG-KGSTAGEPRIGAMASIPCGVCPRISQCTPDGII 222


>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
           gi|561012478|gb|ESW11339.1| hypothetical protein
           PHAVU_008G021700g [Phaseolus vulgaris]
          Length = 239

 Score =  164 bits (416), Expect = 2e-38
 Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDT-----DHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MS+ Q +   KRKR D           E++LY++I SK+  GIW+  +  ET +P+    
Sbjct: 1   MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++NK +K Y+A  FEPS E+TGGDWY  G LDT+FI+ +K  
Sbjct: 61  KSLKLLQSKNLIK-EVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEV 119

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           CL  I + K AT  G+ E  R+   F  + T Q+ I EI+ +L+L+ E+ +VKSTG G+F
Sbjct: 120 CLKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQ-IDEILRALVLDDEIEEVKSTGLGDF 178

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + +P G  CY+C +           GA+AS+PCGVCPRI+ C+PDG+I
Sbjct: 179 SSVPVGRICYRCKS-KGGNRGEQKPGAMASIPCGVCPRINFCTPDGII 225


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  164 bits (416), Expect = 2e-38
 Identities = 93/228 (40%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDT-----DHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MS  Q +   KRKR D           E++LY++I SK+  GIW+  +  ET +P+    
Sbjct: 1   MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++NK +K Y+A  FEPS E+TGG WY  G+LDT+FI+ +K  
Sbjct: 61  KSLKLLQSKNLIK-EVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDV 119

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           CL  I + K AT  G+ E  R+   F+ + TTQ+ I EI+ +L+L+ E+V+VKSTG G+F
Sbjct: 120 CLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQ-IDEILRTLVLDDEIVEVKSTGFGDF 178

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           + +P G  CY+C +           GA+AS+PCGVCPRI+ C+PDG+I
Sbjct: 179 SSVPVGRICYRCKS-KGGNRGEQKPGAMASIPCGVCPRINFCTPDGII 225


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score =  162 bits (410), Expect = 9e-38
 Identities = 92/228 (40%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR Q     KRK+PD+        + E+I+Y+VIRSK+  GIW   +    K+P+    
Sbjct: 1   MSRLQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVAN 60

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++ + +K Y+A  FEP+ E+TGG WY++GK+D   I+ LK  
Sbjct: 61  KALKSLETKKLIK-EVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQ 119

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           CL  I K + ATL+GI + +R+    + + TT + I E++ +L+L+ EVV+VKS G GEF
Sbjct: 120 CLKWIYKQRVATLEGILDAIRKSGISNVELTTVQ-IEELVRALVLDNEVVEVKSNGMGEF 178

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
             IP G  CYK T+           GA++S+PCGVCPRIS+C+PDG+I
Sbjct: 179 DSIPVGKVCYKSTS--KGSRGDPKIGAMSSIPCGVCPRISDCTPDGII 224


>gb|AFK40562.1| unknown [Lotus japonicus]
          Length = 232

 Score =  162 bits (409), Expect = 1e-37
 Identities = 94/221 (42%), Positives = 128/221 (57%), Gaps = 2/221 (0%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPD-TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXXXX 491
           MSR   +   KRKRPD TD E    ++Y +I SKE  GIW A +  ETK+P+        
Sbjct: 1   MSRLPGSSSLKRKRPDLTDGED---VVYKLIHSKENMGIWIADIKRETKMPDNMVKKCIK 57

Query: 490 XXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 311
                     E+ N++++ +K Y+A  FEPS ELTGGDWY DGK DT+FI+A K   L  
Sbjct: 58  SLQDKNLVK-EVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVFLKY 116

Query: 310 I-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEFALIP 134
           + K K AT  G+ E  R+   F    T Q+ + EI+ +L+L+ E+++V+STG  EFA +P
Sbjct: 117 VFKQKVATCDGVLEWTRKNAVFSVDVTAQQ-VEEILRALVLDDEIIEVESTGKEEFASVP 175

Query: 133 YGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPD 11
            G  CYK              GA+AS+PCGVCPRI +C+PD
Sbjct: 176 KGKICYKSKG---GVRGEKKAGAMASIPCGVCPRIIKCAPD 213


>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|590615245|ref|XP_007023169.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  161 bits (408), Expect = 2e-37
 Identities = 90/226 (39%), Positives = 132/226 (58%), Gaps = 4/226 (1%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE---QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXX 497
           MSR Q     KRKRP    +   + E+I++DVI+ K+  GI    +  E  +P+      
Sbjct: 1   MSRLQGPNALKRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTKC 60

Query: 496 XXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 317
                       E+ N++N+ +K +I+  FEPS+E+TGG WY +G LDTE+I+ LK  C 
Sbjct: 61  LKSLLAKNLIK-EVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCW 119

Query: 316 MGIKD-KAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEFAL 140
             I   K ATL+G+ + ++R      + + Q+ I EI+ +L+L+ EV++VKS+GTGEFA 
Sbjct: 120 RKIYGLKVATLEGVTDAIKRSNVSQIELSKQQ-IEEIVKALVLDNEVMEVKSSGTGEFAS 178

Query: 139 IPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           IP G  CYKC             G +AS+PCGVCP+IS C+PDG+I
Sbjct: 179 IPVGKVCYKCIG-KRGYGGEPKVGTMASIPCGVCPQISHCTPDGII 223


>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
           gi|462404542|gb|EMJ10006.1| hypothetical protein
           PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score =  161 bits (408), Expect = 2e-37
 Identities = 93/218 (42%), Positives = 127/218 (58%), Gaps = 6/218 (2%)
 Frame = -3

Query: 637 KRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXXXXXXXXXX 473
           KRK+PD+    E     EKI+Y VIRSK+  GIW+  +  E  +P+              
Sbjct: 8   KRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQAKN 67

Query: 472 XXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMGIKD-KA 296
               E+ N+++K +K Y+A  FEPS ELTGGDWY++G LD  +I  +K      I   K 
Sbjct: 68  LIK-EVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLKV 126

Query: 295 ATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEFALIPYGDTCY 116
           ATL+GI + V++   F   FT Q+ I EI+  L+L++ V +VKSTG GEF   P G  CY
Sbjct: 127 ATLEGISDEVKKSGIFKTSFTKQQ-IEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVCY 185

Query: 115 KCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           K T+           GA+AS+PCGVCPRIS+C+PDG+I
Sbjct: 186 KSTS-KGGSKREPKVGAMASIPCGVCPRISQCTPDGII 222


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
          Length = 233

 Score =  158 bits (399), Expect = 2e-36
 Identities = 93/224 (41%), Positives = 133/224 (59%), Gaps = 10/224 (4%)
 Frame = -3

Query: 643 LNKRKRPD--------TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIP-NXXXXXXXX 491
           ++KRKRPD        TDHE   +++YDVIRSK+  GIW+  +  E ++           
Sbjct: 1   MSKRKRPDSNAPSDSLTDHE---RLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSI 57

Query: 490 XXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 311
                    KE+ N+ +K +K  +A  FEPS E++GG WY++G LDTEFI  +K  CL  
Sbjct: 58  KSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQ 117

Query: 310 -IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEFALIP 134
            IK K ATL+GI + ++R  AF    T Q+ I EI+ +L+L+ ++++VKS G+GEF  IP
Sbjct: 118 IIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIVRALVLDNQIMEVKSNGSGEFTNIP 176

Query: 133 YGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
            G  CYK  +           G+LAS+PCGVCP+I+ C PDG+I
Sbjct: 177 VGKVCYKNVS-KGGGGGEPKTGSLASIPCGVCPQINICKPDGVI 219


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  157 bits (396), Expect = 4e-36
 Identities = 92/224 (41%), Positives = 134/224 (59%), Gaps = 10/224 (4%)
 Frame = -3

Query: 643 LNKRKRPD--------TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIP-NXXXXXXXX 491
           ++KRKRP+        TDHE   +++YDVIRSK+  GIW+  +  E ++           
Sbjct: 1   MSKRKRPESNAPSDSLTDHE---RLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSI 57

Query: 490 XXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 311
                    KE+ N+ +K +K  +A  FEPS E++GG WY++G LDTEFI  +K  CL  
Sbjct: 58  KSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQ 117

Query: 310 -IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEFALIP 134
            IK K ATL+GI + ++R  AF    T Q+ I EI+ +L+L+ ++++VKS G+GEF  IP
Sbjct: 118 IIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIVRALVLDNQIMEVKSNGSGEFTNIP 176

Query: 133 YGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
            G  CYK  +           G+LAS+PCGVCP+I+ C+PDG+I
Sbjct: 177 VGKVCYKNVS-KGGGGGEPKTGSLASIPCGVCPQINICTPDGVI 219


>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score =  157 bits (396), Expect = 4e-36
 Identities = 91/228 (39%), Positives = 130/228 (57%), Gaps = 6/228 (2%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 503
           MSR Q     KRK+P+++       + E+ LY+ IRSK+  GIW+  +  ET +P+    
Sbjct: 1   MSRFQG---QKRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVN 57

Query: 502 XXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 323
                         E+ N++NK +K Y+AT FEPS E+TGG WY +G LDT FI  LK  
Sbjct: 58  KSLKVLQAKNLIK-EVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQ 116

Query: 322 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEF 146
           C   I K K AT++ + + + R         T+++I EI+ +L+L+ +V +VKS G GEF
Sbjct: 117 CKKQIEKLKVATVEAVTDFINR-TGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEF 175

Query: 145 ALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           A IP G  CYK  +           GA+AS+PCGVCPRI  C+P+G+I
Sbjct: 176 ASIPVGKVCYK--SIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGII 221


>ref|XP_004303315.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Fragaria vesca subsp. vesca]
           gi|470134993|ref|XP_004303316.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Fragaria
           vesca subsp. vesca] gi|470134995|ref|XP_004303317.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc6-like isoform 3 [Fragaria vesca subsp. vesca]
          Length = 236

 Score =  156 bits (395), Expect = 5e-36
 Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 7/229 (3%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPD------TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXX 506
           MSR+Q     KRKR D      T+HE +   LYD IRSK   G+    L  ET +     
Sbjct: 1   MSRSQQPSALKRKRLDSQSGSLTEHESK---LYDAIRSKTDMGMSVQDLRRETGLQTNLF 57

Query: 505 XXXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKR 326
                          E+ N  NKT+K Y+AT FEPS E+TGG WY +G+ DT+FI  +KR
Sbjct: 58  TKAIKTLQAKQLIK-EVKNFDNKTRKHYMATEFEPSKEITGGAWYDNGQFDTDFIKVVKR 116

Query: 325 TCLMGIKD-KAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGE 149
             +  I D K ATL+GI   + + K      +TQE +++I+++L+L+ EV+KV STG GE
Sbjct: 117 ELVKVIYDQKIATLEGISNAISKKKFLTVNLSTQE-LKQILEALVLDNEVLKVVSTGMGE 175

Query: 148 FALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           F  I  G  CYKC              ++AS+PCGVCPRI++C+PDG+I
Sbjct: 176 FVGIKAGKDCYKCCK--RGVRGEPNLASMASIPCGVCPRINQCTPDGII 222


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  155 bits (391), Expect = 1e-35
 Identities = 94/230 (40%), Positives = 135/230 (58%), Gaps = 11/230 (4%)
 Frame = -3

Query: 658 AQSTLLNKRKRPD--------TDHEQEEKILYDVIRS-KEGSGIWSASLVHETKIP-NXX 509
           A+ + ++KRKRPD        TDHE   +++YDVIRS K+  GIW+  +  E K+     
Sbjct: 14  AKGSGMSKRKRPDSNAPSDSLTDHE---RLIYDVIRSNKQDMGIWTRDMKRELKVNLPDN 70

Query: 508 XXXXXXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALK 329
                          KE+ N+ NK +K  +A  FEPS E++GG WY++G LDTEFI  +K
Sbjct: 71  IVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVK 130

Query: 328 RTCLMG-IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTG 152
             CL   IK K ATL+GI + ++R  AF    T Q+ I EI+ +++L+ ++++VKS G+G
Sbjct: 131 SQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIVRAVVLDNQIMEVKSNGSG 189

Query: 151 EFALIPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           EF  IP G  CYK  +            + ASVPCGVCP+I+ C+PDG+I
Sbjct: 190 EFTNIPVGKVCYKNVSKGGGGGEPKTGSS-ASVPCGVCPQINFCTPDGVI 238


>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Solanum lycopersicum]
           gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Solanum
           lycopersicum]
          Length = 237

 Score =  154 bits (390), Expect = 2e-35
 Identities = 85/226 (37%), Positives = 132/226 (58%), Gaps = 4/226 (1%)
 Frame = -3

Query: 667 MSRAQSTLLNKRKRPDTDHE---QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXX 497
           MSR+      KRKRPD+  +     E ++ +V++SK+  G+W A +  E  I        
Sbjct: 1   MSRSSEAAALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIA-PALVDK 59

Query: 496 XXXXXXXXXXXKEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 317
                      K++ +++NK +K Y+A  +EPS+ELTGG WY++GKLD EFI  L+ TCL
Sbjct: 60  CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119

Query: 316 MGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSLILEREVVKVKSTGTGEFAL 140
             I   K AT++GI + +++ K  +    T +++ EI++S++L+  +++VKSTG GE+  
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVE--CCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHS 177

Query: 139 IPYGDTCYKCTNXXXXXXXXXXXGALASVPCGVCPRISECSPDGLI 2
           IP G  CY+              G +AS+PCG CPRIS C+PDG+I
Sbjct: 178 IPIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGII 221