BLASTX nr result
ID: Paeonia23_contig00044431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00044431
(264 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 95 1e-17
ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, part... 92 6e-17
gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thali... 91 2e-16
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 90 3e-16
emb|CAD22561.1| reverse transcriptase [Brassica rapa subsp. rapa] 90 3e-16
ref|XP_007214395.1| hypothetical protein PRUPE_ppa026776mg, part... 90 4e-16
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 89 5e-16
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript... 89 5e-16
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 89 5e-16
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 89 5e-16
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 89 6e-16
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 89 8e-16
pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2)... 88 1e-15
gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thali... 88 1e-15
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 88 1e-15
gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thali... 87 2e-15
pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7)... 87 2e-15
emb|CAD22570.1| reverse transcriptase [Brassica juncea] 87 2e-15
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 87 2e-15
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 87 2e-15
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/77 (57%), Positives = 55/77 (71%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWVE 203
RLI DNILIAHE+ H F N+ G+ ++AIKLDMEKAYD LEW+ + M K GF W+E
Sbjct: 560 RLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIWIE 619
Query: 204 WTM*CIQSVSYSLLING 254
W CI S S+S+L+NG
Sbjct: 620 WIRSCISSASFSVLVNG 636
>ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, partial [Prunus persica]
gi|462403251|gb|EMJ08808.1| hypothetical protein
PRUPE_ppa018907mg, partial [Prunus persica]
Length = 1566
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWV 200
GR I DNILIAHEL HDF +KG MAIK+D+EKAYD L+W+ +R + +FGF + W
Sbjct: 937 GRSIFDNILIAHELFHDFKRKKGSMGAMAIKIDLEKAYDLLDWKYIRGCLNQFGFSNDWC 996
Query: 201 EWTM*CIQSVSYSLLING 254
+ M C+ S S+S+LING
Sbjct: 997 DRIMNCVSSTSFSMLING 1014
>gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKGK*S-YMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
GR ISDN+L+AHELLH +R+ S Y+A+K D+ KAYD +EW + ++M++ GF +W
Sbjct: 99 GRNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRW 158
Query: 198 VEWTM*CIQSVSYSLLING 254
V+W M C+ SVSY +LING
Sbjct: 159 VKWIMTCVTSVSYEVLING 177
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
GRLISDNILIA E+ H N K +MAIK DM KAYD +EW + ++ K GF +KW
Sbjct: 327 GRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKW 386
Query: 198 VEWTM*CIQSVSYSLLINGQ 257
+ W M CI +V Y +LINGQ
Sbjct: 387 ISWIMWCITTVQYKVLINGQ 406
>emb|CAD22561.1| reverse transcriptase [Brassica rapa subsp. rapa]
Length = 139
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 18 SGRLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDK 194
+GRLISDN+L+AHE++H N K ++AIK DM KAYD +EW+ + + K GF +
Sbjct: 41 AGRLISDNVLVAHEMVHGLRTNPLCKSEFIAIKTDMSKAYDRVEWDFLEALFQKLGFHQQ 100
Query: 195 WVEWTM*CIQSVSYSLLINGQS 260
W+ W M C++SVS+S+L+NGQS
Sbjct: 101 WISWIMCCVRSVSFSVLLNGQS 122
>ref|XP_007214395.1| hypothetical protein PRUPE_ppa026776mg, partial [Prunus persica]
gi|462410260|gb|EMJ15594.1| hypothetical protein
PRUPE_ppa026776mg, partial [Prunus persica]
Length = 972
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWV 200
GR I DNILIAHEL HDF +KG MAIKL++EKAYD L+W+ +R + +FGF + W
Sbjct: 716 GRSIFDNILIAHELFHDFKLKKGARGAMAIKLELEKAYDLLDWKYIRGCLDQFGFSNDWC 775
Query: 201 EWTM*CIQSVSYSLLING 254
+ M C+ S S+S+LING
Sbjct: 776 DRIMNCVSSTSFSMLING 793
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWV 200
RLISDNIL+AHE++H N + +MA K DM KAYD +EW + MM GF +KW+
Sbjct: 543 RLISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWI 602
Query: 201 EWTM*CIQSVSYSLLINGQ 257
W M C+ SVSYS+LINGQ
Sbjct: 603 SWIMNCVTSVSYSVLINGQ 621
>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 400
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWV 200
RLI+DNILIA E H N K YMAIK DM KAYD +EW +R +MLK GF KWV
Sbjct: 125 RLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWV 184
Query: 201 EWTM*CIQSVSYSLLING 254
+W + CI SVSY +L+NG
Sbjct: 185 DWIIFCISSVSYKILLNG 202
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWV 200
RLI+DNILIA E H N K YMAIK DM KAYD +EW +R +MLK GF KWV
Sbjct: 491 RLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWV 550
Query: 201 EWTM*CIQSVSYSLLING 254
+W + CI SVSY +L+NG
Sbjct: 551 DWIIFCISSVSYKILLNG 568
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKWV 200
RLISDNILIAHE++H N K +M K DM KAYD +EW ++ +++ GF DKW+
Sbjct: 496 RLISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAYDRVEWSFLQEILVALGFNDKWI 555
Query: 201 EWTM*CIQSVSYSLLINGQ 257
W M C+ SV+YS+LINGQ
Sbjct: 556 SWIMGCVTSVTYSVLINGQ 574
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKGK*S-YMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
G+ ISDN+L+AHELLH +R+ S Y+A+K D+ KAYD +EW + ++M++ GF +W
Sbjct: 905 GQNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRW 964
Query: 198 VEWTM*CIQSVSYSLLING 254
V+W M C+ SVSY +LING
Sbjct: 965 VKWIMTCVTSVSYEVLING 983
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
GRLISDNILIA E+ H N K +MAIK DM KAYD +EW + ++ K GF +KW
Sbjct: 393 GRLISDNILIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKW 452
Query: 198 VEWTM*CIQSVSYSLLINGQ 257
+ W M CI +V Y +L+NGQ
Sbjct: 453 ISWIMWCITTVQYRVLLNGQ 472
>pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2) - Arabidopsis
thaliana retrotransposon Ta24 (fragment)
Length = 184
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +3
Query: 18 SGRLISDNILIAHELLHDF*NRKGK*S-YMAIKLDMEKAYDWLEWELVRRMMLKFGFVDK 194
S RLI+DNIL+AHEL+H S +MAIK DM KAYD +EW +R ++L GF +
Sbjct: 92 SERLITDNILVAHELVHSLRTHPSISSEFMAIKSDMSKAYDRVEWSFLRALLLALGFHQR 151
Query: 195 WVEWTM*CIQSVSYSLLINGQ 257
WVEW M C+ +V+YS+LIN Q
Sbjct: 152 WVEWIMTCVSTVTYSVLINDQ 172
>gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +3
Query: 18 SGRLISDNILIAHELLHDF*NRKGK*S-YMAIKLDMEKAYDWLEWELVRRMMLKFGFVDK 194
S RLI+DNIL+AHEL+H S +MAIK DM KAYD +EW +R ++L GF +
Sbjct: 98 SERLITDNILVAHELVHSLRTHPSISSEFMAIKSDMSKAYDRVEWSFLRALLLALGFHQR 157
Query: 195 WVEWTM*CIQSVSYSLLINGQ 257
WVEW M C+ +V+YS+LIN Q
Sbjct: 158 WVEWIMTCVSTVTYSVLINDQ 178
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKG-K*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
GR+I+DN++IAHE++H RK +YMA+K D+ KAYD +EW+ + M FGF DKW
Sbjct: 164 GRIINDNVMIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKW 223
Query: 198 VEWTM*CIQSVSYSLLING 254
+ W M ++SV YS+LING
Sbjct: 224 IGWIMAAVKSVHYSVLING 242
>gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*NRKG--K*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
R I+DN+LI HE+LH + G K +MA+K DM KAYD +EW+ +R +M K GF KW
Sbjct: 100 RAITDNVLITHEVLH-YLKTSGAKKRCFMAVKSDMSKAYDRIEWDFIRLVMEKMGFHPKW 158
Query: 198 VEWTM*CIQSVSYSLLINGQSE 263
VEW M CI +VSYS L+NG ++
Sbjct: 159 VEWIMQCITTVSYSFLLNGAAQ 180
>pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7) - Arabidopsis
thaliana retrotransposon Ta20 (fragment)
Length = 184
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +3
Query: 24 RLISDNILIAHELLHDF*NRKG--K*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
R I+DN+LI HE+LH + G K +MA+K DM KAYD +EW+ +R +M K GF KW
Sbjct: 94 RAITDNVLITHEVLH-YLKTSGAKKRCFMAVKSDMSKAYDRIEWDFIRLVMEKMGFHPKW 152
Query: 198 VEWTM*CIQSVSYSLLINGQSE 263
VEW M CI +VSYS L+NG ++
Sbjct: 153 VEWIMQCITTVSYSFLLNGAAQ 174
>emb|CAD22570.1| reverse transcriptase [Brassica juncea]
Length = 139
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 SGRLISDNILIAHELLHDF*-NRKGK*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDK 194
+GR I+DNIL+A E H N K K +MAIK DM KAY +EW+ + M K GF DK
Sbjct: 41 AGRAIADNILLAQEAFHALRTNXKCKNEFMAIKTDMSKAYYRVEWDFLEAMXRKMGFRDK 100
Query: 195 WVEWTM*CIQSVSYSLLING 254
W++W M C++SVSYS+LING
Sbjct: 101 WIQWIMRCVRSVSYSVLING 120
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKG-K*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
GRL++DN++IAHE++H RK SYMA+K D+ KAYD +EW + M FGF + W
Sbjct: 925 GRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETW 984
Query: 198 VEWTM*CIQSVSYSLLING 254
++W M ++SV+YS+L+NG
Sbjct: 985 IKWIMGAVKSVNYSVLVNG 1003
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 GRLISDNILIAHELLHDF*NRKG-K*SYMAIKLDMEKAYDWLEWELVRRMMLKFGFVDKW 197
GRL++DN++IAHE++H RK SYMA+K D+ KAYD +EW + M FGF + W
Sbjct: 905 GRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETW 964
Query: 198 VEWTM*CIQSVSYSLLING 254
++W M ++SV+YS+L+NG
Sbjct: 965 IKWIMGAVKSVNYSVLVNG 983