BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00044383
         (671 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              294   2e-77
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   237   3e-60
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   235   1e-59
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   232   9e-59
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   231   1e-58
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   231   1e-58
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   231   1e-58
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   231   1e-58
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   231   1e-58
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   231   2e-58
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   231   2e-58
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   231   2e-58
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   231   2e-58
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   231   2e-58
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  230   3e-58
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]   229   5e-58
emb|CCH50966.1| T4.5 [Malus x robusta]                                229   8e-58
emb|CAN76947.1| hypothetical protein VITISV_017166 [Vitis vinifera]   227   2e-57
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   227   3e-57
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   227   3e-57

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  294 bits (753), Expect = 2e-77
 Identities = 137/212 (64%), Positives = 173/212 (81%)
 Frame = -3

Query: 636  MVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDALLQA 457
            +VTR +HGI KP+PKYA+H  L     +A+  EP  +++A+K+ +WR AM  EF AL QA
Sbjct: 846  IVTRSKHGISKPNPKYAMHSTL-----LALPLEPTCYTQAAKYPEWREAMDHEFKALQQA 900

Query: 456  GTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPVVK 277
            GTW LVPP   MNILPNKWV++IK+++DGS+ERYKARLVANG+HQQ GLDY ETFSPVVK
Sbjct: 901  GTWFLVPPSSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTETFSPVVK 960

Query: 276  HTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHRSL 97
            H+TIR++L+LAV H W IRQLDVQN FLHG+L +++YM+Q  GFVDP FP HVC+L RSL
Sbjct: 961  HSTIRLVLALAVSHRWPIRQLDVQNVFLHGYLNEDIYMKQHVGFVDPKFPQHVCKLRRSL 1020

Query: 96   YGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            YGLKQ+PRAW + FSDYLEE+GF+ S+ D+S+
Sbjct: 1021 YGLKQAPRAWFRCFSDYLEELGFLESRADYSM 1052


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  237 bits (604), Expect = 3e-60
 Identities = 114/213 (53%), Positives = 156/213 (73%)
 Frame = -3

Query: 639  RMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDALLQ 460
            R  TRLQ GI K +  Y        +  + +  EP++ ++A +++ W+ AM  E++AL+ 
Sbjct: 906  RPTTRLQRGIRK-EKVYTDGTVKYKNTFLTVTGEPKNLTDALQNTNWKKAMDIEYEALMN 964

Query: 459  AGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPVV 280
              TW LVPP+   N++  KWVYKIKRK DGSL+RYKARLVA G+ Q+ G+DY++TFSPVV
Sbjct: 965  NKTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1024

Query: 279  KHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHRS 100
            K  TIR++LS+AV  GWC+RQLDVQNAFLHGFL++EVYM+QP G+ D +FP +VC+L ++
Sbjct: 1025 KAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYEDESFPGYVCKLDKA 1084

Query: 99   LYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            LYGLKQ+PRAW+ R S  L ++GF  S+ D SL
Sbjct: 1085 LYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSL 1117


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  235 bits (599), Expect = 1e-59
 Identities = 119/225 (52%), Positives = 156/225 (69%), Gaps = 2/225 (0%)
 Frame = -3

Query: 669  SPHRSSSPQPRMVTRLQHGIWKPDPKYALHINLSDS--KNIAMEQEPRSFSEASKHSKWR 496
            SP  ++S  P M+TR + GI+KP   +A+HI+ S    +     +EPR F  A+KH +W 
Sbjct: 795  SPRVTTSNHP-MITRGKAGIFKPRLYHAMHISSSSQLFQAFLALKEPRGFKSAAKHPEWL 853

Query: 495  TAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQA 316
            +AM  E  AL +  TW LVP     N++  +W++K K  +DGS+ER+KARLVA G+ Q  
Sbjct: 854  SAMDDEIHALKKNDTWVLVPRPQHHNVVGCRWIFKTKLHSDGSIERHKARLVAQGFSQVH 913

Query: 315  GLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDP 136
            GLD+ +TFSPVV+  T+R+ILSLAV  GW + QLDV+NAFLHGFL +EVYM+QP G+ DP
Sbjct: 914  GLDFGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGFLNEEVYMEQPPGYTDP 973

Query: 135  NFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
             FP HVCRL R+LYGLKQ+PRAW  RFS +L + GF  SQ D SL
Sbjct: 974  QFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKHGFHSSQADSSL 1018


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  232 bits (591), Expect = 9e-59
 Identities = 117/226 (51%), Positives = 152/226 (67%), Gaps = 3/226 (1%)
 Frame = -3

Query: 669  SPHRSSSPQP---RMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKW 499
            SPH   + Q    R VTR QHG+ +P       +       +    EP S  EA   + W
Sbjct: 340  SPHTFDAAQQIQQRPVTRSQHGVHRPKKYTDGTVRYGC---LTETGEPSSLQEALSSANW 396

Query: 498  RTAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQ 319
            + AM  EF ALL   TW LVPP    NI+ +KWVYKIK+KADG+++RYKARLVA G+ Q+
Sbjct: 397  KQAMDKEFSALLHNKTWHLVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQR 456

Query: 318  AGLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVD 139
             G+DY++TFSPVVK  TIR++LS+A+  GW +RQLDVQNAFLHG+L +EVYM+QP GF D
Sbjct: 457  YGIDYEDTFSPVVKAATIRLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFED 516

Query: 138  PNFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
               P  +C+L ++LYGLKQ+PRAW+ R S  L+E+GF  S+ D SL
Sbjct: 517  ARQPHFLCKLDKALYGLKQAPRAWYSRLSKKLQELGFSSSKADTSL 562


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  231 bits (590), Expect = 1e-58
 Identities = 119/218 (54%), Positives = 150/218 (68%)
 Frame = -3

Query: 654  SSPQPRMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEF 475
            S+  PR  TRLQHGI KP  K      +      A   EP S SEA    +WR AM AEF
Sbjct: 890  SAAAPR--TRLQHGISKP--KQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEF 945

Query: 474  DALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKET 295
             AL +  TW+LVPP  + N++  KWV+K+K  ADGS++R KARLVA G+ QQ G+DY +T
Sbjct: 946  QALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDYDDT 1005

Query: 294  FSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVC 115
            FSPVVKH+TIR++LSLAV   W +RQLDVQNAFLHG L++ VYM+QP GF D   P++ C
Sbjct: 1006 FSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHC 1065

Query: 114  RLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
             L +SLYGLKQ PRAW+ R S+ L+ +GF+ S+ D SL
Sbjct: 1066 HLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVSL 1103


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
           gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
           Japonica Group]
          Length = 821

 Score =  231 bits (590), Expect = 1e-58
 Identities = 114/213 (53%), Positives = 150/213 (70%)
 Frame = -3

Query: 639 RMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDALLQ 460
           R  TRLQ GI K   +           N     EP+S  EA  +  W+ AM AE+ AL++
Sbjct: 276 RPKTRLQSGIRK---EKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIE 332

Query: 459 AGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPVV 280
             TW LVPP+   N++  KWVYK+KRKADGSL+RYKARLVA G+ Q+ G+DY++TFSPVV
Sbjct: 333 NKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 392

Query: 279 KHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHRS 100
           K  TIR++LSLAV  GW +RQLDV+NAFLHG L++EVYM+QP G+   + P++VC+L ++
Sbjct: 393 KAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKA 452

Query: 99  LYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
           LYGLKQ+PRAW+ R S  L E+GF+ S+ D SL
Sbjct: 453 LYGLKQAPRAWYSRLSTKLSELGFVPSKADTSL 485


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  231 bits (590), Expect = 1e-58
 Identities = 120/210 (57%), Positives = 148/210 (70%)
 Frame = -3

Query: 630  TRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDALLQAGT 451
            TRLQ G+ K        I    S   A   EP +  EA K   W+ AM +E+DAL++  T
Sbjct: 637  TRLQSGVRKEKVYTDGTIKYKHSWFTA-SGEPTNDLEALKDKNWKLAMDSEYDALVKNKT 695

Query: 450  WSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPVVKHT 271
            W LVPP+   NI+  KWVYKIKRKADG+L+RYKARLVA G+ Q+ G+DY++TFSPVVK  
Sbjct: 696  WHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAA 755

Query: 270  TIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHRSLYG 91
            TIR+ILSLAV  GW +RQLDVQNAFLHG+L++EVYM QP GF DP  P HVC+L ++LYG
Sbjct: 756  TIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYG 815

Query: 90   LKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            LKQ+PRAW  R S  L ++GF  S+ D SL
Sbjct: 816  LKQAPRAWFSRLSKKLMDLGFKGSKADTSL 845


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  231 bits (590), Expect = 1e-58
 Identities = 117/218 (53%), Positives = 152/218 (69%)
 Frame = -3

Query: 654  SSPQPRMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEF 475
            +S Q R VTRLQ GI KP       +       +    EP +  EA  +S WR AM  E+
Sbjct: 390  ASDQTRPVTRLQKGISKPKRYTDGTVRYGC---LTTTGEPENLREAMANSNWRLAMEQEY 446

Query: 474  DALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKET 295
             A +   TW LVPP    NI+  KW+YKIKRKADGS++RYKARLVA G+ Q+ G+DY++T
Sbjct: 447  SAFMSNKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDT 506

Query: 294  FSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVC 115
            FS VVK  TIR+ILS+AV  GW +RQLDVQNAFLHG+L++EVYM+QP GF +   P+++C
Sbjct: 507  FSLVVKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLC 566

Query: 114  RLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            +L ++LYGLKQ+PRAW+ R S  L+E+GFI S+ D SL
Sbjct: 567  KLDKALYGLKQAPRAWYSRLSTKLQELGFISSKADTSL 604


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  231 bits (590), Expect = 1e-58
 Identities = 113/215 (52%), Positives = 148/215 (68%)
 Frame = -3

Query: 645  QPRMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDAL 466
            Q RM TR ++ I KP  K  LH +    K       P S S+A K   WR AM  E+DAL
Sbjct: 814  QHRMTTRAKNNITKPIQKLNLHTH----KPTFQTTTPTSISQALKDQNWRQAMSDEYDAL 869

Query: 465  LQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSP 286
            ++ GTW LVPP    N++  KW+++IKR +DGS++RYKARLVA G+HQ+ G+DY ETFSP
Sbjct: 870  VRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGVDYHETFSP 929

Query: 285  VVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLH 106
            VVK TT+R++LS+AV +GW +RQLDV NAFL G L + V+M QP GFVD + PS+VC+LH
Sbjct: 930  VVKPTTVRLVLSIAVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSDHPSYVCKLH 989

Query: 105  RSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            +++YGLKQ+PRAW+     +L   GF  S  D SL
Sbjct: 990  KAIYGLKQAPRAWYHELRQFLLTSGFKNSHSDTSL 1024


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  231 bits (589), Expect = 2e-58
 Identities = 110/221 (49%), Positives = 153/221 (69%)
 Frame = -3

Query: 663  HRSSSPQPRMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMG 484
            H +++    M TR ++ I KP  K  LHI LS      ++ EP + ++A K  KWR AM 
Sbjct: 618  HHTTNSNHSMQTRAKNNIRKPIQKLNLHIQLSKP----LDLEPTTPTQALKDPKWRKAMS 673

Query: 483  AEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDY 304
             E+DAL++ GTW LVP  PS N++  KW+++ KR +DGS++R+KARLVA G+HQ+  +DY
Sbjct: 674  EEYDALVRNGTWELVPSNPSQNVVGCKWIFRTKRNSDGSIDRFKARLVAKGFHQRPDIDY 733

Query: 303  KETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPS 124
             +TFSPVVK TTI ++LS+AV +GW +RQLDV N FL G L + VYM QP GF+D + PS
Sbjct: 734  YDTFSPVVKPTTIMLVLSVAVSNGWILRQLDVNNVFLQGTLTEHVYMTQPPGFIDQDSPS 793

Query: 123  HVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            HVC+L +++YGLKQ+PRAW++    +L + GF  S  D SL
Sbjct: 794  HVCKLKKAIYGLKQAPRAWYQELRSFLLQFGFTNSHADTSL 834


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  231 bits (589), Expect = 2e-58
 Identities = 116/213 (54%), Positives = 150/213 (70%)
 Frame = -3

Query: 639  RMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDALLQ 460
            R  TRLQ GI K +  Y        +  + +  EP +  +A K + W+ AM AEF AL  
Sbjct: 706  RPATRLQSGIRK-EKVYTDGTVKYRTTFLTVTGEPENLDDALKDNNWKKAMDAEFMALQN 764

Query: 459  AGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPVV 280
              TW LVPP+   N++  KWVYKIKRK DGSL+RYKARLVA G+ Q+ G+DY++TFSPVV
Sbjct: 765  NKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 824

Query: 279  KHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHRS 100
            K  TIR+ILS+AV  GWC+RQLDVQNAFLHG L++EVYM+QP G+ D + P +VC+L ++
Sbjct: 825  KAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDKA 884

Query: 99   LYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            LYGLKQ+PRAW+ R S  L ++GF  S+ D SL
Sbjct: 885  LYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSL 917


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  231 bits (588), Expect = 2e-58
 Identities = 120/210 (57%), Positives = 148/210 (70%)
 Frame = -3

Query: 630  TRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEFDALLQAGT 451
            TRLQ G+ K        I    S   A   EP +  EA K   W+ AM +E+DAL++  T
Sbjct: 915  TRLQSGVRKEKVYTDGTIKYKHSWFTA-SGEPTNDLEALKDKNWKLAMDSEYDALVKNKT 973

Query: 450  WSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPVVKHT 271
            W LVPP+   NI+  KWVYKIKRKADG+L+RYKARLVA G+ Q+ G+DY++TFSPVVK  
Sbjct: 974  WHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAA 1033

Query: 270  TIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHRSLYG 91
            TIR+ILSLAV  GW +RQLDVQNAFLHG+L++EVYM QP GF DP  P HVC+L ++LYG
Sbjct: 1034 TIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYG 1093

Query: 90   LKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            LKQ+PRAW  R S  L ++GF  S+ D SL
Sbjct: 1094 LKQAPRAWFSRLSKKLMDLGFKGSKPDTSL 1123


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  231 bits (588), Expect = 2e-58
 Identities = 111/180 (61%), Positives = 138/180 (76%)
 Frame = -3

Query: 540  EPRSFSEASKHSKWRTAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLE 361
            EP +  EA K   W+ AM +E+DAL++  TW LVPP+   NI+  KWVYKIKRKADG+L+
Sbjct: 937  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLD 996

Query: 360  RYKARLVANGYHQQAGLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFL 181
            RYKARLVA G+ Q+ G+DY++TFSPVVK  TIR+ILSLAV  GW +RQLDVQNAFLHG+L
Sbjct: 997  RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYL 1056

Query: 180  QDEVYMQQPRGFVDPNFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            ++EVYM QP GF DP  P HVC+L ++LYGLKQ+PRAW  R S  L ++GF  S+ D SL
Sbjct: 1057 EEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSL 1116


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  231 bits (588), Expect = 2e-58
 Identities = 105/180 (58%), Positives = 141/180 (78%)
 Frame = -3

Query: 540  EPRSFSEASKHSKWRTAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLE 361
            EP +  +A +++ W+ AM AE+ AL++  TW LVPP+   N++  KWVYKIKRK DGSL+
Sbjct: 922  EPENLQDALQNNNWKCAMDAEYMALIKNNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSLD 981

Query: 360  RYKARLVANGYHQQAGLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFL 181
            RYKARLVA G+ Q+ G+DY++TFSPVVK  TIR+ILS+AV  GWC+RQLDVQNAFLHG L
Sbjct: 982  RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGVL 1041

Query: 180  QDEVYMQQPRGFVDPNFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            ++EVYM+QP G+ +P+ P +VC+L ++LYGLKQ+PRAW+ R S  L ++GF  S+ D SL
Sbjct: 1042 EEEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTSL 1101


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  230 bits (587), Expect = 3e-58
 Identities = 119/225 (52%), Positives = 154/225 (68%), Gaps = 6/225 (2%)
 Frame = -3

Query: 657  SSSPQPRMVTRLQHGIWKPDP------KYALHINLSDSKNIAMEQEPRSFSEASKHSKWR 496
            +++P PR  TRL+ GI K         KY    +           EP++  EA     W+
Sbjct: 891  TAAPAPRPHTRLRSGIRKEKVYTDGTVKYGCFTSTG---------EPQNDKEALGDKNWK 941

Query: 495  TAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQA 316
             AM AE+DAL++  TW LVP     N++  KWVYKIKRKADG+L+RYKARLVA G+ Q+ 
Sbjct: 942  AAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRY 1001

Query: 315  GLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDP 136
            G+DY++TFSPVVK  TIR+ILS+AV  GW +RQLDVQNAFLHGFL++EVYMQQP GF   
Sbjct: 1002 GIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESF 1061

Query: 135  NFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            + P++VC+L ++LYGLKQ+PRAW+ R S  L E+GF  S+ D SL
Sbjct: 1062 SKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSL 1106


>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
          Length = 1556

 Score =  229 bits (585), Expect = 5e-58
 Identities = 113/225 (50%), Positives = 154/225 (68%), Gaps = 4/225 (1%)
 Frame = -3

Query: 663  HRSSSPQPR----MVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWR 496
            H+   PQP+    M+TR Q GI KP+PKYAL    S + + ++ +EP +  +A  H  W+
Sbjct: 962  HQKQPPQPQPAPSMITRSQRGIIKPNPKYAL---TSTTNSTSIPREPHNIRDALAHPGWK 1018

Query: 495  TAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQA 316
             AM  E  AL    TW LVP   +M+++ +KWV+K K K DGSL+R KAR+VA GYHQ  
Sbjct: 1019 AAMDEELQALHTNKTWVLVPRTSNMHVIGSKWVFKPKLKPDGSLDRLKARVVAKGYHQVD 1078

Query: 315  GLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDP 136
            GLDY ETFSPV+K  TIR++L++A++  W IRQLDV+NAFLHG + ++++M+QP G  D 
Sbjct: 1079 GLDYTETFSPVIKPGTIRMVLTIALVKKWPIRQLDVKNAFLHGLISEDIHMEQPPGMADL 1138

Query: 135  NFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
              P+HVC+L ++LYGLKQ+PRAW  RFS +L + GF  S  D SL
Sbjct: 1139 EHPTHVCKLQKALYGLKQAPRAWFDRFSAFLLKYGFFCSLADPSL 1183


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  229 bits (583), Expect = 8e-58
 Identities = 116/214 (54%), Positives = 146/214 (68%), Gaps = 2/214 (0%)
 Frame = -3

Query: 636  MVTRLQHGIWKPDPKYALHINLSDSKN--IAMEQEPRSFSEASKHSKWRTAMGAEFDALL 463
            M+TR + GI KP    A    L  + +   A+   P +F +ASK S W  AM  EF AL 
Sbjct: 1114 MITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQALQ 1173

Query: 462  QAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKETFSPV 283
              GTW LVP   + NI+  KWV+K+K K DG++ERYKARLVA G+HQQ GLD+ ETFSPV
Sbjct: 1174 STGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFSPV 1233

Query: 282  VKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVCRLHR 103
             K TTIR++LS+AV + W I QLDV NAFLHG L+++VYM QP GFVDP+ P HVC+L +
Sbjct: 1234 AKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRK 1293

Query: 102  SLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            SLYGLKQ+PRAW++ F   +  +GF  S  D SL
Sbjct: 1294 SLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSL 1327


>emb|CAN76947.1| hypothetical protein VITISV_017166 [Vitis vinifera]
          Length = 548

 Score =  227 bits (579), Expect = 2e-57
 Identities = 107/182 (58%), Positives = 134/182 (73%)
 Frame = -3

Query: 546 EQEPRSFSEASKHSKWRTAMGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGS 367
           E+EP  +S   KHS  R AM  EFDALL  GTW+LVP     N++  KWVYKIKRK DG 
Sbjct: 8   EKEPTCYSTTVKHSNXREAMNKEFDALLANGTWTLVPKPXYANLVDCKWVYKIKRKXDGG 67

Query: 366 LERYKARLVANGYHQQAGLDYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHG 187
           +ER+KA LVA G+HQ  G+D+ ETFSPVVK TTIR++LSLAV  GW +RQ+D+ NAFLHG
Sbjct: 68  IERFKACLVAKGFHQHEGVDFGETFSPVVKPTTIRMVLSLAVSRGWHLRQIDIXNAFLHG 127

Query: 186 FLQDEVYMQQPRGFVDPNFPSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDH 7
            LQ++VYM QP  F+ P    HVC+L +SLYGL+Q+P+AW  R +D L+ +GFI SQ +H
Sbjct: 128 VLQEDVYMTQPPRFIHPQLTHHVCKLQKSLYGLRQAPQAWFSRLTDQLQALGFIGSQXBH 187

Query: 6   SL 1
           SL
Sbjct: 188 SL 189


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  227 bits (578), Expect = 3e-57
 Identities = 118/218 (54%), Positives = 148/218 (67%)
 Frame = -3

Query: 654  SSPQPRMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTAMGAEF 475
            +S +PR  TRLQ G+ KP       I            EP   +EA     W+ AM  E+
Sbjct: 771  ASTRPR--TRLQQGVRKPKVYTDGTIRYGC---FTSSGEPYDLNEALGDVNWKDAMDIEY 825

Query: 474  DALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGLDYKET 295
             AL++  TW LVPP+   N++  KWVYKIKRKADGSL+RYKARLVA GY QQ G+DY +T
Sbjct: 826  SALMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDT 885

Query: 294  FSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNFPSHVC 115
            FSPVVKH TIR+ILS+AV  GW + QLDVQNAFLHG L++EVYMQQP G+ D    ++VC
Sbjct: 886  FSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVC 945

Query: 114  RLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            +L ++LYGLKQ+PRAW+ R S+ L  +GF  S+ D SL
Sbjct: 946  KLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSL 983


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  227 bits (578), Expect = 3e-57
 Identities = 118/223 (52%), Positives = 151/223 (67%), Gaps = 3/223 (1%)
 Frame = -3

Query: 660  RSSSPQ---PRMVTRLQHGIWKPDPKYALHINLSDSKNIAMEQEPRSFSEASKHSKWRTA 490
            RSS+P+    R VT LQ GI K        +       +    EPR   +A   + W+ A
Sbjct: 707  RSSTPEGEASRPVTHLQKGIRKEKIYTDRTVKYGC---LTTTGEPRDLHDALHDTNWKHA 763

Query: 489  MGAEFDALLQAGTWSLVPPRPSMNILPNKWVYKIKRKADGSLERYKARLVANGYHQQAGL 310
            M A+F ALL   TW LVPP+   NI+  KWVYKIKRK DGSL+RYKARLVA G+ Q+ G+
Sbjct: 764  MDAKFTALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGI 823

Query: 309  DYKETFSPVVKHTTIRVILSLAVLHGWCIRQLDVQNAFLHGFLQDEVYMQQPRGFVDPNF 130
            DY++TFSPVVK  TIR+ILS+AV  GW +RQLDVQNAFLHG L++EVYM+QP G+ D   
Sbjct: 824  DYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVH 883

Query: 129  PSHVCRLHRSLYGLKQSPRAWHKRFSDYLEEVGFIMSQVDHSL 1
            P +VC+L ++LYGLKQ+PRAW+ + S  L+ +GF  S+ D SL
Sbjct: 884  PDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSL 926