BLASTX nr result
ID: Paeonia23_contig00044342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00044342
(322 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo... 101 1e-19
emb|CAD40174.2| OSJNBa0061A09.13 [Oryza sativa Japonica Group] 100 3e-19
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo... 100 3e-19
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo... 100 3e-19
emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform... 96 5e-18
gb|AFQ62092.1| P194 [Rice tungro bacilliform virus] 96 5e-18
gb|ADV58678.1| P194 [Rice tungro bacilliform virus] 96 5e-18
emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus] 96 5e-18
gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus] 96 5e-18
gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus] 96 5e-18
dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]... 96 7e-18
gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacillifo... 96 7e-18
gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacillifo... 96 7e-18
gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacillifo... 96 7e-18
gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus] 96 7e-18
ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform v... 96 7e-18
emb|CAC15488.1| polyprotein [Rice tungro bacilliform virus] 94 2e-17
ref|XP_006386682.1| hypothetical protein POPTR_0002s18640g, part... 93 3e-17
gb|ABA98940.1| Zinc knuckle family protein [Oryza sativa Japonic... 92 6e-17
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group] 92 6e-17
>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1711
Score = 101 bits (251), Expect = 1e-19
Identities = 50/102 (49%), Positives = 66/102 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN N I Y +PD MM + +FI + G QTKGYEE G NLL+ + F+GR T S K
Sbjct: 152 MNENMLITYIAPDLMMPVNEFIDKMSFGFQTKGYEEFK-GTNLLISIEFIGRLTNRSASK 210
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
YK+ V+ V+E + SKGIK + PL IDSE AG +W + +FI+
Sbjct: 211 YKINVNDVIEKMHSKGIKFMSPLXIDSEERAGEKWPISEFIK 252
>emb|CAD40174.2| OSJNBa0061A09.13 [Oryza sativa Japonica Group]
Length = 1342
Score = 100 bits (248), Expect = 3e-19
Identities = 52/102 (50%), Positives = 63/102 (61%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN N I Y +PD MM IK+FI + G QTKGYEE G NLLV + F+GR T S K
Sbjct: 155 MNENMLITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFK-GTNLLVSIEFIGRLTNRSASK 213
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
YK+ V+ V+E + SKGI + PL I SE AG EW + IE
Sbjct: 214 YKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIE 255
>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 100 bits (248), Expect = 3e-19
Identities = 52/102 (50%), Positives = 63/102 (61%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN N I Y +PD MM IK+FI + G QTKGYEE G NLLV + F+GR T S K
Sbjct: 155 MNENMLITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFK-GTNLLVSIEFIGRLTNRSASK 213
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
YK+ V+ V+E + SKGI + PL I SE AG EW + IE
Sbjct: 214 YKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIE 255
>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 100 bits (248), Expect = 3e-19
Identities = 52/102 (50%), Positives = 63/102 (61%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN N I Y +PD MM IK+FI + G QTKGYEE G NLLV + F+GR T S K
Sbjct: 155 MNENMLITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFK-GTNLLVSIEFIGRLTNRSASK 213
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
YK+ V+ V+E + SKGI + PL I SE AG EW + IE
Sbjct: 214 YKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIE 255
>emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform virus]
Length = 1674
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/101 (48%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL + + +GR TTN + +
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSIAIKTIGRLTTNIQAR 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EWNL KF+
Sbjct: 216 YKMNVKDIVEQISSQGITMVAPMEIDSSHLDGNEWNLSKFM 256
>gb|AFQ62092.1| P194 [Rice tungro bacilliform virus]
Length = 1674
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/101 (48%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL + + +GR TTN + +
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSIAIKTIGRLTTNIQAR 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EWNL KF+
Sbjct: 216 YKMNVKNIVEQISSQGITMVAPMEIDSSHLDGNEWNLSKFM 256
>gb|ADV58678.1| P194 [Rice tungro bacilliform virus]
Length = 1674
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/101 (48%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL + + +GR TTN + +
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSIAIKTIGRLTTNIQAR 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EWNL KF+
Sbjct: 216 YKMNVKDIVEQISSQGITMVAPMEIDSSHLDGNEWNLSKFM 256
>emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus]
Length = 1674
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/101 (48%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL + + +GR TTN + +
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSIAIKTIGRLTTNIQAR 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EWNL KF+
Sbjct: 216 YKMNVKDIVEQISSQGITMVAPMEIDSSHLDGNEWNLSKFM 256
>gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]
Length = 1675
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/106 (48%), Positives = 66/106 (62%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIEPSIT 319
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+ T
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNQENT 261
>gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/106 (48%), Positives = 66/106 (62%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 161 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 218
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIEPSIT 319
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+ T
Sbjct: 219 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNQENT 264
>dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]
gi|229052|prf||1817177A capsid protein
Length = 1675
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFL 256
>gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1675
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFL 256
>gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFL 256
>gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFL 256
>gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]
Length = 1675
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFL 256
>ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform virus]
gi|130653|sp|P27502.1|POL_RTBVP RecName:
Full=Polyprotein P3; AltName: Full=P194 protein;
Contains: RecName: Full=Putative movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
AltName: Full=Coat protein; Short=CP; Contains: RecName:
Full=Protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase/Ribonuclease H; Short=RT; AltName:
Full=p55; Flags: Precursor gi|61913|emb|CAA40997.1| ORF
P194 [Rice tungro bacilliform virus]
Length = 1675
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/101 (49%), Positives = 65/101 (64%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL V + +GR TTN + K
Sbjct: 158 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSVAIKTIGRLTTNIQSK 215
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ IDS L G EW+L KF+
Sbjct: 216 YKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFL 256
>emb|CAC15488.1| polyprotein [Rice tungro bacilliform virus]
Length = 531
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
MN G+ Y PDF IKD + H++IGIQT GYE G NL + + +GR TTN + +
Sbjct: 49 MNAGCGVFYSCPDFAKYIKD-LSHLKIGIQTLGYENYE-GKNLSIAIKTIGRLTTNIQAR 106
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFI 304
YK+ V +VE +SS+GI M+ P+ ID L G EWNL KF+
Sbjct: 107 YKMNVKDIVEQISSQGITMVAPMEIDPSHLDGNEWNLSKFM 147
>ref|XP_006386682.1| hypothetical protein POPTR_0002s18640g, partial [Populus
trichocarpa] gi|550345323|gb|ERP64479.1| hypothetical
protein POPTR_0002s18640g, partial [Populus trichocarpa]
Length = 153
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/102 (46%), Positives = 65/102 (63%)
Frame = +2
Query: 2 MNNNSGILYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIK 181
+N N G L CSPDF++ +KDF HI+IGIQTKG+E+ G+NLL+ + FLG+ +S +
Sbjct: 12 LNENRGFLCCSPDFLLDMKDFTDHIKIGIQTKGFEQF-KGNNLLLCIGFLGKMGRSSNTR 70
Query: 182 YKVFVDQVVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
Y+ + +KMIKP +E LAGLEW LD FI+
Sbjct: 71 YRF-----------ESLKMIKPTKYSAEDLAGLEWKLDDFIK 101
>gb|ABA98940.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
Length = 825
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/95 (49%), Positives = 60/95 (63%)
Frame = +2
Query: 23 LYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIKYKVFVDQ 202
++ +PD MM IK+FI + G QTKGYEE G NLLV + F+GR T S KYK+ V+
Sbjct: 110 IHQAPDLMMPIKEFIDKMSFGFQTKGYEEFK-GTNLLVSIEFIGRLTNRSASKYKINVND 168
Query: 203 VVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
V+E + SKGI + PL I SE AG EW + IE
Sbjct: 169 VIENMHSKGITFMSPLKISSEERAGEEWKISDLIE 203
>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1326
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/95 (49%), Positives = 60/95 (63%)
Frame = +2
Query: 23 LYCSPDFMMSIKDFIKHIQIGIQTKGYEEANSGDNLLVHVAFLGRCTTNSRIKYKVFVDQ 202
++ +PD MM IK+FI + G QTKGYEE G NLLV + F+GR T S KYK+ V+
Sbjct: 110 IHQAPDLMMPIKEFIDKMSFGFQTKGYEEFK-GTNLLVSIEFIGRLTNRSASKYKINVND 168
Query: 203 VVELLSSKGIKMIKPLNIDSERLAGLEWNLDKFIE 307
V+E + SKGI + PL I SE AG EW + IE
Sbjct: 169 VIENMHSKGITFMSPLKISSEERAGEEWKISDLIE 203