BLASTX nr result
ID: Paeonia23_contig00044108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00044108
(474 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 150 2e-34
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 150 2e-34
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 147 1e-33
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 145 6e-33
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 145 6e-33
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 140 2e-31
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 138 9e-31
ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago t... 132 4e-29
ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,... 131 8e-29
ref|XP_003599441.1| RNA polymerase sigma factor [Medicago trunca... 130 1e-28
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca... 130 1e-28
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 129 3e-28
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 129 3e-28
ref|XP_002873625.1| hypothetical protein ARALYDRAFT_909325 [Arab... 126 4e-27
ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas... 125 8e-27
ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phas... 125 8e-27
ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phas... 125 8e-27
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps... 125 8e-27
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 124 1e-26
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 123 2e-26
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 150 bits (379), Expect = 2e-34
Identities = 80/136 (58%), Positives = 94/136 (69%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R+P EIAEMLN+HVS V+L +R+R PISLDG T GCMTL+DIIPGPDETMP
Sbjct: 300 RMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGAITDTGCMTLQDIIPGPDETMPEKMV 359
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
EREA ILRLHFGL+G T +SC+EIG LL LSRERVRQI GIAL
Sbjct: 360 QKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCKEIGRLLTLSRERVRQIRGIAL 419
Query: 114 SKLRQMGSVDDLKVYI 67
+KL+Q ++LKVY+
Sbjct: 420 TKLQQTNIRNNLKVYM 435
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 150 bits (379), Expect = 2e-34
Identities = 80/136 (58%), Positives = 95/136 (69%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R+P +EIAEMLN+HVS V+L +R+R PISLDG T GCMTL+DIIPGPDETMP
Sbjct: 300 RMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGAITDTGCMTLQDIIPGPDETMPEKMV 359
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
EREA ILRLHFGL+G T +SC+EIG LL LSRERVRQI GIAL
Sbjct: 360 QKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCKEIGRLLTLSRERVRQIRGIAL 419
Query: 114 SKLRQMGSVDDLKVYI 67
+KL+Q ++LKVY+
Sbjct: 420 TKLQQTNIRNNLKVYM 435
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 147 bits (371), Expect = 1e-33
Identities = 80/136 (58%), Positives = 92/136 (67%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
RLP HDEIAEM+NV S V+LV +RSR P+SLD T GCM L+DII GPDE MP
Sbjct: 316 RLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTDQGCMALQDIIRGPDEMMPETML 375
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+REA +LRLHFGLNGDT S EEIG LLKLSRERVRQI IAL
Sbjct: 376 KKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSFEEIGRLLKLSRERVRQINSIAL 435
Query: 114 SKLRQMGSVDDLKVYI 67
SKL+Q +++DLK+YI
Sbjct: 436 SKLKQTSTLEDLKLYI 451
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 145 bits (366), Expect = 6e-33
Identities = 79/136 (58%), Positives = 96/136 (70%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
RLP +DEIAE ++V+VS V+LV++RSR PIS+D T GCMTL++IIPGPDET P
Sbjct: 183 RLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMV 242
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
EREA+ILRL+FG+NG+T LS EEIG L+KLSRERVRQI IAL
Sbjct: 243 KRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIAL 302
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ VD LK+Y+
Sbjct: 303 SKLRQTSVVDYLKLYM 318
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 145 bits (366), Expect = 6e-33
Identities = 79/136 (58%), Positives = 96/136 (70%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
RLP +DEIAE ++V+VS V+LV++RSR PIS+D T GCMTL++IIPGPDET P
Sbjct: 290 RLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMV 349
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
EREA+ILRL+FG+NG+T LS EEIG L+KLSRERVRQI IAL
Sbjct: 350 KRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIAL 409
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ VD LK+Y+
Sbjct: 410 SKLRQTSVVDYLKLYM 425
>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
gi|462415663|gb|EMJ20400.1| hypothetical protein
PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 140 bits (353), Expect = 2e-31
Identities = 78/136 (57%), Positives = 93/136 (68%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
RLP HDEIAE++ V+ S VKLV +RSR PISLD T G MTL++II GP+E MP
Sbjct: 304 RLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVATVRGSMTLQEIIQGPEEMMPEKML 363
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+REA++LRLHFGLNG++ S EEIG LLKLSRERVRQI GIAL
Sbjct: 364 IRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEEIGRLLKLSRERVRQINGIAL 423
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ +D+LK+YI
Sbjct: 424 SKLRQTSILDNLKLYI 439
>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 422
Score = 138 bits (347), Expect = 9e-31
Identities = 74/135 (54%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +DEIA+++ VHVS V+LV++R R PISLD T GCMTL++IIPGP+E P
Sbjct: 283 RFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAITERGCMTLQEIIPGPEEISPEKMV 342
Query: 294 XXXXXXXXXXXXXXXXXE-REAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIA 118
REA++LRLHFGL+GD LSCEEIG LLKLSRER+RQI GIA
Sbjct: 343 RKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLSCEEIGRLLKLSRERIRQINGIA 402
Query: 117 LSKLRQMGSVDDLKV 73
LSKL+Q V+DL++
Sbjct: 403 LSKLQQTNIVNDLRI 417
>ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355488477|gb|AES69680.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 185
Score = 132 bits (333), Expect = 4e-29
Identities = 75/136 (55%), Positives = 91/136 (66%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P ++EIAE+LNV+VS VKLV++RSR+PISLD T + LK+IIPGP E +P
Sbjct: 49 RKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLILKEIIPGPVEMIPEKMV 108
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+RE I+RL+FGLNG+T LS EEIG LLKLSRER+RQI GIAL
Sbjct: 109 ERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGKLLKLSRERIRQIHGIAL 168
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ VD LK Y+
Sbjct: 169 SKLRQNTIVDSLKFYV 184
>ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cicer arietinum]
Length = 407
Score = 131 bits (330), Expect = 8e-29
Identities = 74/136 (54%), Positives = 92/136 (67%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P ++E+AE+LNV+VS VKLV++RSR+PISLD G +TLK+I+PGP E +P
Sbjct: 271 RKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKAVFDQGNLTLKEIMPGPVEMIPEKMV 330
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+REA ILRL+FGLNG+T LS EEIG LKLSRER+RQI GIAL
Sbjct: 331 ERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETPLSFEEIGKQLKLSRERIRQIHGIAL 390
Query: 114 SKLRQMGSVDDLKVYI 67
SKL+Q VD LK Y+
Sbjct: 391 SKLQQTTLVDSLKFYV 406
>ref|XP_003599441.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355488489|gb|AES69692.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 267
Score = 130 bits (328), Expect = 1e-28
Identities = 74/136 (54%), Positives = 90/136 (66%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P ++EIAE+LNV+VS VKLV++RSR+PISLD T + LK+IIPGP E +P
Sbjct: 131 RKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLILKEIIPGPVEMIPEKMV 190
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+RE I+RL+FGLNG+T LS EEIG LLKLSRER+RQI GIAL
Sbjct: 191 ERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGKLLKLSRERIRQIHGIAL 250
Query: 114 SKLRQMGSVDDLKVYI 67
SKL Q VD LK Y+
Sbjct: 251 SKLEQNTLVDSLKFYV 266
>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 403
Score = 130 bits (328), Expect = 1e-28
Identities = 74/136 (54%), Positives = 90/136 (66%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P ++EIAE+LNV+VS VKLV++RSR+PISLD T + LK+IIPGP E +P
Sbjct: 267 RKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLILKEIIPGPVEMIPEKMV 326
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+RE I+RL+FGLNG+T LS EEIG LLKLSRER+RQI GIAL
Sbjct: 327 ERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGKLLKLSRERIRQIHGIAL 386
Query: 114 SKLRQMGSVDDLKVYI 67
SKL Q VD LK Y+
Sbjct: 387 SKLEQNTLVDSLKFYV 402
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 129 bits (325), Expect = 3e-28
Identities = 74/136 (54%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +DEIA++LN+ VS V+L +R R PISLD +TL++IIPGPDET+P
Sbjct: 286 RSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLTLQEIIPGPDETIPENMV 345
Query: 294 XXXXXXXXXXXXXXXXXE-REAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIA 118
REAHILRLHFGLNG T SCEEIG L+KLSRERVRQIIG A
Sbjct: 346 KRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGRLVKLSRERVRQIIGTA 405
Query: 117 LSKLRQMGSVDDLKVY 70
LSKLR V+ LK Y
Sbjct: 406 LSKLRHKEIVEPLKAY 421
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 129 bits (325), Expect = 3e-28
Identities = 74/136 (54%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +DEIA++LN+ VS V+L +R R PISLD +TL++IIPGPDET+P
Sbjct: 282 RSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLTLQEIIPGPDETIPENMV 341
Query: 294 XXXXXXXXXXXXXXXXXE-REAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIA 118
REAHILRLHFGLNG T SCEEIG L+KLSRERVRQIIG A
Sbjct: 342 KRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGRLVKLSRERVRQIIGTA 401
Query: 117 LSKLRQMGSVDDLKVY 70
LSKLR V+ LK Y
Sbjct: 402 LSKLRHKEIVEPLKAY 417
>ref|XP_002873625.1| hypothetical protein ARALYDRAFT_909325 [Arabidopsis lyrata subsp.
lyrata] gi|297319462|gb|EFH49884.1| hypothetical protein
ARALYDRAFT_909325 [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 126 bits (316), Expect = 4e-27
Identities = 69/135 (51%), Positives = 87/135 (64%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +EIAE LN+HVS V+L +RSR P+SLD + G MTL++I+ GPDET P
Sbjct: 134 RQPSCEEIAEHLNLHVSAVRLAVERSRSPVSLDRVVSQNGRMTLQEIVRGPDETRPEEMV 193
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
RE+ +L L+FGLNG+T +S EEIG LKLSRERVRQI GIAL
Sbjct: 194 KREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIAL 253
Query: 114 SKLRQMGSVDDLKVY 70
KLR + +V+DLK+Y
Sbjct: 254 KKLRNVHNVNDLKIY 268
>ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022159|gb|ESW20889.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 367
Score = 125 bits (313), Expect = 8e-27
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +DE AE+LNV S ++LV+++SR+PISLD T G MTL++IIPGP++ P
Sbjct: 231 RKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMV 290
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+REA I+ L++GLNG+T L+ +EIG +++LSRER+RQI GIAL
Sbjct: 291 KRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIAL 350
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ +D+LK Y+
Sbjct: 351 SKLRQTSIIDNLKFYL 366
>ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022157|gb|ESW20887.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 366
Score = 125 bits (313), Expect = 8e-27
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +DE AE+LNV S ++LV+++SR+PISLD T G MTL++IIPGP++ P
Sbjct: 230 RKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMV 289
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+REA I+ L++GLNG+T L+ +EIG +++LSRER+RQI GIAL
Sbjct: 290 KRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIAL 349
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ +D+LK Y+
Sbjct: 350 SKLRQTSIIDNLKFYL 365
>ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022156|gb|ESW20886.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 296
Score = 125 bits (313), Expect = 8e-27
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +DE AE+LNV S ++LV+++SR+PISLD T G MTL++IIPGP++ P
Sbjct: 160 RKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMV 219
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
+REA I+ L++GLNG+T L+ +EIG +++LSRER+RQI GIAL
Sbjct: 220 KRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIAL 279
Query: 114 SKLRQMGSVDDLKVYI 67
SKLRQ +D+LK Y+
Sbjct: 280 SKLRQTSIIDNLKFYL 295
>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
gi|482556540|gb|EOA20732.1| hypothetical protein
CARUB_v10001054mg [Capsella rubella]
Length = 419
Score = 125 bits (313), Expect = 8e-27
Identities = 68/135 (50%), Positives = 87/135 (64%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +EIAE LN+HVS V+L ++SR P+SLD + G MTL++I+ GPDET P
Sbjct: 280 RQPSCEEIAEHLNLHVSAVRLAVEKSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMV 339
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
RE+ +L L+FGLNG+T +S EEIG LKLSRERVRQI GIAL
Sbjct: 340 KREHIKNEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIAL 399
Query: 114 SKLRQMGSVDDLKVY 70
KLR + +V+DLK+Y
Sbjct: 400 KKLRNVHNVNDLKIY 414
>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
gi|557100961|gb|ESQ41324.1| hypothetical protein
EUTSA_v10013654mg [Eutrema salsugineum]
Length = 421
Score = 124 bits (311), Expect = 1e-26
Identities = 67/135 (49%), Positives = 88/135 (65%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R+P +EIAE LN+HVS V+L +R R P+SLD + G MTL++I+ GPDET P
Sbjct: 282 RIPSCEEIAEHLNIHVSAVRLAVERGRSPVSLDRVASLNGRMTLQEIVRGPDETRPEEMV 341
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
RE+ +L L+FGLNG+T +S EEIG LKLSRERVRQI GIAL
Sbjct: 342 KREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIAL 401
Query: 114 SKLRQMGSVDDLKVY 70
+KLR + +V+DL++Y
Sbjct: 402 TKLRNVHNVNDLRLY 416
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor
[Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
factor 4 [Arabidopsis thaliana]
Length = 419
Score = 123 bits (309), Expect = 2e-26
Identities = 68/135 (50%), Positives = 87/135 (64%)
Frame = -1
Query: 474 RLPRHDEIAEMLNVHVSKVKLVADRSRRPISLDGGTTHLGCMTLKDIIPGPDETMPXXXX 295
R P +EIAE LN++VS V+L +RSR P+SLD + G MTL++I+ GPDET P
Sbjct: 280 RQPSCEEIAEHLNLNVSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMV 339
Query: 294 XXXXXXXXXXXXXXXXXEREAHILRLHFGLNGDTTLSCEEIGTLLKLSRERVRQIIGIAL 115
RE+ +L L+FGLNG+T +S EEIG LKLSRERVRQI GIAL
Sbjct: 340 KREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIAL 399
Query: 114 SKLRQMGSVDDLKVY 70
KLR + +V+DLK+Y
Sbjct: 400 KKLRNVHNVNDLKIY 414