BLASTX nr result

ID: Paeonia23_contig00042433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00042433
         (344 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317482.1| pentatricopeptide repeat-containing family p...    65   1e-08
ref|XP_007021561.1| Tetratricopeptide repeat (TPR)-like superfam...    62   6e-08
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    58   2e-06
emb|CBI20261.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06

>ref|XP_002317482.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222860547|gb|EEE98094.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 433

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 6/66 (9%)
 Frame = +2

Query: 2   EKGRIEEALCYFSEMTSKGMVPEPRTELLVNA------RVGESGKISSMNSDKTSRTSHR 163
           +KGR+E+AL YF EM +KGMVPEPRT++L N+      +  E G+ S+ N+D++ R+SH 
Sbjct: 362 DKGRVEDALRYFGEMENKGMVPEPRTKILCNSMNTRKQKEAEEGEKSAKNNDQSPRSSHE 421

Query: 164 RGKKFK 181
           R  K K
Sbjct: 422 RNTKKK 427


>ref|XP_007021561.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508721189|gb|EOY13086.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 534

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +2

Query: 2   EKGRIEEALCYFSEMTSKGMVPEPRTELLVNARVGESGKISSMNSDKTSRTSHRRGKKFK 181
           +KG IE+AL YF+EMTSKGMVPEPRTE+LVNA      K+     +K  +   + GK  +
Sbjct: 466 DKGSIEDALSYFNEMTSKGMVPEPRTEILVNAM---KDKLKEQEGEKERKEPGKNGKSLR 522

Query: 182 SR 187
            R
Sbjct: 523 PR 524


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
 Frame = +2

Query: 2   EKGRIEEALCYFSEMTSKGMVPEPRTELLVNA-------RVGESGKISSMNSDKTSRTSH 160
           EKGRI +AL YF EMTSKGMV EPRTE+LV++          E G+  ++N  K+  + H
Sbjct: 439 EKGRINDALHYFGEMTSKGMVSEPRTEMLVSSMNMKLKDNDAEQGEKDAINGVKSLGSMH 498

Query: 161 RRGKKFKSR 187
           +R ++ + R
Sbjct: 499 KRRREIRVR 507


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
 Frame = +2

Query: 2   EKGRIEEALCYFSEMTSKGMVPEPRTELLVNA-------RVGESGKISSMNSDKTSRTSH 160
           +KGR+++AL YF +MT  GMVPEPRT LLVNA       R  E     + N   + R S 
Sbjct: 441 DKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAEPEGKGARNKADSIRPST 500

Query: 161 RRGKK 175
           RRGKK
Sbjct: 501 RRGKK 505


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
 Frame = +2

Query: 2   EKGRIEEALCYFSEMTSKGMVPEPRTELLVNA-------RVGESGKISSMNSDKTSRTSH 160
           +KGR+++AL YF +MT  GMVPEPRT LLVNA       R  E     + N   + R S 
Sbjct: 478 DKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAEPEGKGARNKADSIRPST 537

Query: 161 RRGKK 175
           RRGKK
Sbjct: 538 RRGKK 542


Top