BLASTX nr result

ID: Paeonia23_contig00042314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00042314
         (241 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9...    60   2e-07
emb|CBI36473.3| unnamed protein product [Vitis vinifera]               60   2e-07
gb|EXB67201.1| hypothetical protein L484_025679 [Morus notabilis]      58   1e-06
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|...    54   8e-06

>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis vinifera]
          Length = 1041

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 28/53 (52%), Positives = 40/53 (75%)
 Frame = -1

Query: 196  VCG*LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38
            +CG LL+++GE STR+VQLS FDT+ +  +PE+  S +L +AV LF C LLE+
Sbjct: 989  ICGLLLSDSGEGSTRDVQLSCFDTVFSAPVPEDLHSSHLQNAVALFTCSLLEV 1041



 Score = 20.8 bits (42), Expect(2) = 2e-07
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 240  LAVNARMAYLKMA*E 196
            L V+AR+AY KMA E
Sbjct: 974  LPVDARVAYSKMAEE 988


>emb|CBI36473.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 28/53 (52%), Positives = 40/53 (75%)
 Frame = -1

Query: 196 VCG*LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38
           +CG LL+++GE STR+VQLS FDT+ +  +PE+  S +L +AV LF C LLE+
Sbjct: 149 ICGLLLSDSGEGSTRDVQLSCFDTVFSAPVPEDLHSSHLQNAVALFTCSLLEV 201



 Score = 20.8 bits (42), Expect(2) = 2e-07
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 240 LAVNARMAYLKMA*E 196
           L V+AR+AY KMA E
Sbjct: 134 LPVDARVAYSKMAEE 148


>gb|EXB67201.1| hypothetical protein L484_025679 [Morus notabilis]
          Length = 135

 Score = 57.8 bits (138), Expect(2) = 1e-06
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -1

Query: 184 LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38
           LL++ GE STR+VQLS FDT++   IP+E RS +L +AV+LF CYL E+
Sbjct: 85  LLSDLGEGSTRDVQLSCFDTVSNAPIPDELRSSHLQEAVSLFTCYLSEV 133



 Score = 20.4 bits (41), Expect(2) = 1e-06
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 240 LAVNARMAYLKMA*E 196
           L V AR+AY KMA E
Sbjct: 66  LPVEARVAYSKMAEE 80


>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|223533319|gb|EEF35071.1|
            nucleoporin, putative [Ricinus communis]
          Length = 1067

 Score = 54.3 bits (129), Expect(2) = 8e-06
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = -1

Query: 184  LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38
            LL   GE STR+ QLS FDTI    +PE+ RS YL DAV+LF CYL E+
Sbjct: 1017 LLHYAGEGSTRDAQLSCFDTIFGAPVPEDLRSNYLQDAVSLFTCYLSEM 1065



 Score = 20.8 bits (42), Expect(2) = 8e-06
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 240  LAVNARMAYLKMA*E 196
            L V+AR+AY KMA E
Sbjct: 998  LPVDARVAYSKMAEE 1012


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