BLASTX nr result
ID: Paeonia23_contig00042314
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia23_contig00042314 (241 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9... 60 2e-07 emb|CBI36473.3| unnamed protein product [Vitis vinifera] 60 2e-07 gb|EXB67201.1| hypothetical protein L484_025679 [Morus notabilis] 58 1e-06 ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|... 54 8e-06 >ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis vinifera] Length = 1041 Score = 59.7 bits (143), Expect(2) = 2e-07 Identities = 28/53 (52%), Positives = 40/53 (75%) Frame = -1 Query: 196 VCG*LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38 +CG LL+++GE STR+VQLS FDT+ + +PE+ S +L +AV LF C LLE+ Sbjct: 989 ICGLLLSDSGEGSTRDVQLSCFDTVFSAPVPEDLHSSHLQNAVALFTCSLLEV 1041 Score = 20.8 bits (42), Expect(2) = 2e-07 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -2 Query: 240 LAVNARMAYLKMA*E 196 L V+AR+AY KMA E Sbjct: 974 LPVDARVAYSKMAEE 988 >emb|CBI36473.3| unnamed protein product [Vitis vinifera] Length = 201 Score = 59.7 bits (143), Expect(2) = 2e-07 Identities = 28/53 (52%), Positives = 40/53 (75%) Frame = -1 Query: 196 VCG*LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38 +CG LL+++GE STR+VQLS FDT+ + +PE+ S +L +AV LF C LLE+ Sbjct: 149 ICGLLLSDSGEGSTRDVQLSCFDTVFSAPVPEDLHSSHLQNAVALFTCSLLEV 201 Score = 20.8 bits (42), Expect(2) = 2e-07 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -2 Query: 240 LAVNARMAYLKMA*E 196 L V+AR+AY KMA E Sbjct: 134 LPVDARVAYSKMAEE 148 >gb|EXB67201.1| hypothetical protein L484_025679 [Morus notabilis] Length = 135 Score = 57.8 bits (138), Expect(2) = 1e-06 Identities = 28/49 (57%), Positives = 38/49 (77%) Frame = -1 Query: 184 LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38 LL++ GE STR+VQLS FDT++ IP+E RS +L +AV+LF CYL E+ Sbjct: 85 LLSDLGEGSTRDVQLSCFDTVSNAPIPDELRSSHLQEAVSLFTCYLSEV 133 Score = 20.4 bits (41), Expect(2) = 1e-06 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 Query: 240 LAVNARMAYLKMA*E 196 L V AR+AY KMA E Sbjct: 66 LPVEARVAYSKMAEE 80 >ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|223533319|gb|EEF35071.1| nucleoporin, putative [Ricinus communis] Length = 1067 Score = 54.3 bits (129), Expect(2) = 8e-06 Identities = 29/49 (59%), Positives = 34/49 (69%) Frame = -1 Query: 184 LLTNNGESSTREVQLSYFDTITTILIPEERRSCYL*DAVTLFLCYLLEI 38 LL GE STR+ QLS FDTI +PE+ RS YL DAV+LF CYL E+ Sbjct: 1017 LLHYAGEGSTRDAQLSCFDTIFGAPVPEDLRSNYLQDAVSLFTCYLSEM 1065 Score = 20.8 bits (42), Expect(2) = 8e-06 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -2 Query: 240 LAVNARMAYLKMA*E 196 L V+AR+AY KMA E Sbjct: 998 LPVDARVAYSKMAEE 1012