BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00033710
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [...   120   2e-25
ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]...   120   2e-25
gb|ADD31230.1| RNA polymerase alpha subunit protein [Liquidambar...   120   2e-25
gb|AEX99546.1| RNA polymerase alpha subunit (chloroplast) [Chrys...   119   4e-25
ref|YP_007474761.1| RNA polymerase alpha subunit (chloroplast) [...   119   4e-25
gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]    119   6e-25
ref|YP_007353798.1| RNA polymerase alpha subunit (chloroplast) [...   118   1e-24
emb|CAJ01914.1| DNA-directed RNA polymerase alpha chain [Chrysan...   118   1e-24
gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sa...   117   1e-24
ref|YP_008081489.1| RNA polymerase alpha subunit (chloroplast) [...   117   2e-24
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops...   117   2e-24
ref|YP_004564135.1| RNA polymerase alpha subunit [Nelumbo nucife...   117   2e-24
ref|YP_001936549.1| RNA polymerase alpha subunit [Fagopyrum escu...   117   2e-24
ref|YP_008964474.1| RNA polymerase alpha subunit [Helianthus dec...   116   4e-24
ref|YP_398360.1| RNA polymerase alpha subunit [Lactuca sativa] g...   116   4e-24
ref|YP_004564404.1| RNA polymerase alpha subunit (chloroplast) [...   116   4e-24
ref|YP_588149.2| RNA polymerase alpha subunit (chloroplast) [Hel...   116   4e-24
gb|ABD47264.1| RNA polymerase alpha subunit (chloroplast) [Lactu...   116   4e-24
gb|ABD47177.1| RNA polymerase alpha subunit (chloroplast) [Helia...   116   4e-24
ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus] g...   115   5e-24

>ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [Liquidambar formosana]
           gi|491650402|gb|AGL13462.1| RNA polymerase alpha subunit
           (chloroplast) [Liquidambar formosana]
          Length = 337

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIYTCLKRSNIHTLLDLLNN+QEDLMK+EHF IEDVK+I+  LEKHFA
Sbjct: 270 KSIFIDQSELPPRIYTCLKRSNIHTLLDLLNNNQEDLMKIEHFRIEDVKKILGILEKHFA 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]
           gi|224474167|gb|ACN49356.1| RNA polymerase alpha subunit
           [Nelumbo lutea] gi|383286921|gb|AFH01570.1| RNA
           polymerase alpha subunit (chloroplast) [Nelumbo lutea]
          Length = 339

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/67 (86%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           K IFIDQ ELPPR Y CLKRSNIHTLLDLLNNSQEDLMKMEHF IEDVKQI+D L+KHFA
Sbjct: 272 KCIFIDQSELPPRTYNCLKRSNIHTLLDLLNNSQEDLMKMEHFQIEDVKQILDILQKHFA 331

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 332 IDLPKNK 338


>gb|ADD31230.1| RNA polymerase alpha subunit protein [Liquidambar styraciflua]
          Length = 338

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIYTCLKRSNIHTLLDLLNN+QEDLMK+EHF IEDVK+I+  LEKHFA
Sbjct: 271 KSIFIDQSELPPRIYTCLKRSNIHTLLDLLNNNQEDLMKIEHFRIEDVKKILGILEKHFA 330

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 331 IDLPKNK 337


>gb|AEX99546.1| RNA polymerase alpha subunit (chloroplast) [Chrysanthemum indicum]
          Length = 336

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHFHIEDVKQI+  LEK+F 
Sbjct: 269 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFHIEDVKQILGILEKNFV 328

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 329 IDLPKNK 335


>ref|YP_007474761.1| RNA polymerase alpha subunit (chloroplast) [Chrysanthemum indicum]
           gi|470227741|ref|YP_007624827.1| RNA polymerase alpha
           chain (chloroplast) [Artemisia frigida]
           gi|372863238|gb|AEX99310.1| RNA polymerase alpha subunit
           (chloroplast) [Chrysanthemum indicum]
           gi|401712229|gb|AFP98854.1| RNA polymerase alpha chain
           (chloroplast) [Artemisia frigida]
          Length = 335

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHFHIEDVKQI+  LEK+F 
Sbjct: 268 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFHIEDVKQILGILEKNFV 327

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 328 IDLPKNK 334


>gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]
          Length = 337

 Score =  119 bits (297), Expect = 6e-25
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQLELPPRIY CLKRSNI+TLLDLLNN QEDLMK+EHF IEDVKQI+  LEKHFA
Sbjct: 270 KSIFIDQLELPPRIYNCLKRSNIYTLLDLLNNVQEDLMKIEHFRIEDVKQILGVLEKHFA 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>ref|YP_007353798.1| RNA polymerase alpha subunit (chloroplast) [Chrysanthemum x
           morifolium] gi|375298868|gb|AFA45307.1| RNA polymerase
           alpha subunit (chloroplast) [Chrysanthemum x morifolium]
          Length = 336

 Score =  118 bits (295), Expect = 1e-24
 Identities = 57/67 (85%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQ+DLMKMEHFHIEDVKQI+  LEK+F 
Sbjct: 269 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQDDLMKMEHFHIEDVKQILGILEKNFV 328

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 329 IDLPKNK 335


>emb|CAJ01914.1| DNA-directed RNA polymerase alpha chain [Chrysanthemum x
           morifolium]
          Length = 335

 Score =  118 bits (295), Expect = 1e-24
 Identities = 57/67 (85%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQ+DLMKMEHFHIEDVKQI+  LEK+F 
Sbjct: 268 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQDDLMKMEHFHIEDVKQILGILEKNFV 327

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 328 IDLPKNK 334


>gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sanguinea]
          Length = 337

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           K IFIDQ ELPPRIYTCLKRSNIHTLLDLLNNSQEDLMK+EHF IEDVK+I+  LEKHF 
Sbjct: 270 KYIFIDQSELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKIEHFRIEDVKEILGFLEKHFE 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>ref|YP_008081489.1| RNA polymerase alpha subunit (chloroplast) [Trochodendron
           aralioides] gi|290489702|gb|ADD31235.1| RNA polymerase
           alpha subunit protein [Trochodendron aralioides]
           gi|479279328|gb|AGJ72181.1| RNA polymerase alpha subunit
           (chloroplast) [Trochodendron aralioides]
          Length = 337

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/67 (82%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           K IFIDQ ELPPR Y CLKRSNI+TLLDLLNNSQEDLMK++HFHIEDVKQI+D L+KHF+
Sbjct: 270 KCIFIDQSELPPRTYNCLKRSNIYTLLDLLNNSQEDLMKIDHFHIEDVKQILDILQKHFS 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
          Length = 337

 Score =  117 bits (293), Expect = 2e-24
 Identities = 57/67 (85%), Positives = 59/67 (88%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           K IFIDQLELPPRIY CLKRSNIHTL DLLNNSQEDLMK+EHF IEDVKQI+  LEKHF 
Sbjct: 270 KYIFIDQLELPPRIYNCLKRSNIHTLSDLLNNSQEDLMKIEHFRIEDVKQILGILEKHFT 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>ref|YP_004564135.1| RNA polymerase alpha subunit [Nelumbo nucifera]
           gi|224474255|gb|ACN49441.1| RNA polymerase alpha subunit
           [Nelumbo nucifera] gi|290489668|gb|ADD31218.1| RNA
           polymerase alpha subunit protein [Nelumbo nucifera]
           gi|383286829|gb|AFH01479.1| RNA polymerase alpha subunit
           (chloroplast) [Nelumbo nucifera]
           gi|519666943|gb|AGO98555.1| RNA polymerase alpha subunit
           (chloroplast) [Nelumbo nucifera]
          Length = 339

 Score =  117 bits (293), Expect = 2e-24
 Identities = 57/67 (85%), Positives = 59/67 (88%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           K IFIDQ ELPPR Y CLKRSNIHTLLDLLNNSQEDLMKM HF IEDVKQI+D L+KHFA
Sbjct: 272 KCIFIDQSELPPRTYNCLKRSNIHTLLDLLNNSQEDLMKMFHFQIEDVKQILDILQKHFA 331

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 332 IDLPKNK 338


>ref|YP_001936549.1| RNA polymerase alpha subunit [Fagopyrum esculentum subsp.
           ancestrale] gi|166065389|gb|ABY79764.1| RNA polymerase
           alpha subunit [Fagopyrum esculentum subsp. ancestrale]
          Length = 337

 Score =  117 bits (292), Expect = 2e-24
 Identities = 55/68 (80%), Positives = 61/68 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQLELPPRIY CLK SNIHTLLDLL NSQ+D+MK+EHF IEDVKQI+D LEKHFA
Sbjct: 270 KSIFIDQLELPPRIYNCLKNSNIHTLLDLLTNSQDDIMKIEHFSIEDVKQILDTLEKHFA 329

Query: 182 IDLPNNKL 205
           I+LP  K+
Sbjct: 330 INLPKKKV 337


>ref|YP_008964474.1| RNA polymerase alpha subunit [Helianthus decapetalus]
           gi|559768907|gb|AHB15339.1| RNA polymerase alpha subunit
           [Helianthus decapetalus] gi|559769767|gb|AHB16189.1| RNA
           polymerase alpha subunit [Helianthus giganteus]
          Length = 335

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHF IEDVKQI+  LEK+F 
Sbjct: 268 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILEKNFV 327

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 328 IDLPKNK 334


>ref|YP_398360.1| RNA polymerase alpha subunit [Lactuca sativa]
           gi|90110846|sp|Q332U5.1|RPOA_LACSA RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|78675201|dbj|BAE47627.1| RNA polymerase alpha chain
           [Lactuca sativa]
          Length = 335

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHF IEDVKQI+  LEK+F 
Sbjct: 268 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILEKNFV 327

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 328 IDLPKNK 334


>ref|YP_004564404.1| RNA polymerase alpha subunit (chloroplast) [Ageratina adenophora]
           gi|334089705|gb|AEG64588.1| RNA polymerase alpha subunit
           (chloroplast) [Ageratina adenophora]
          Length = 335

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHF IEDVKQI+  LEK+F 
Sbjct: 268 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILEKNFV 327

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 328 IDLPKNK 334


>ref|YP_588149.2| RNA polymerase alpha subunit (chloroplast) [Helianthus annuus]
           gi|568245239|ref|YP_008964389.1| RNA polymerase alpha
           subunit [Helianthus divaricatus]
           gi|568245411|ref|YP_008964729.1| RNA polymerase alpha
           subunit [Helianthus strumosus]
           gi|568245497|ref|YP_008964814.1| RNA polymerase alpha
           subunit [Helianthus maximiliani]
           gi|568247189|ref|YP_008964219.1| RNA polymerase alpha
           subunit [Helianthus giganteus]
           gi|568247275|ref|YP_008964304.1| RNA polymerase alpha
           subunit [Helianthus grosseserratus]
           gi|568247361|ref|YP_008964559.1| RNA polymerase alpha
           subunit [Helianthus hirsutus]
           gi|568247447|ref|YP_008964644.1| RNA polymerase alpha
           subunit [Helianthus tuberosus]
           gi|158518528|sp|Q1KXS7.2|RPOA_HELAN RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|559768047|gb|AHB14489.1| RNA polymerase alpha subunit
           [Helianthus giganteus] gi|559768133|gb|AHB14574.1| RNA
           polymerase alpha subunit [Helianthus giganteus]
           gi|559768219|gb|AHB14659.1| RNA polymerase alpha subunit
           [Helianthus giganteus] gi|559768305|gb|AHB14744.1| RNA
           polymerase alpha subunit [Helianthus giganteus]
           gi|559768391|gb|AHB14829.1| RNA polymerase alpha subunit
           [Helianthus grosseserratus] gi|559768477|gb|AHB14914.1|
           RNA polymerase alpha subunit [Helianthus grosseserratus]
           gi|559768563|gb|AHB14999.1| RNA polymerase alpha subunit
           [Helianthus divaricatus] gi|559768649|gb|AHB15084.1| RNA
           polymerase alpha subunit [Helianthus divaricatus]
           gi|559768735|gb|AHB15169.1| RNA polymerase alpha subunit
           [Helianthus divaricatus] gi|559768821|gb|AHB15254.1| RNA
           polymerase alpha subunit [Helianthus divaricatus]
           gi|559768993|gb|AHB15424.1| RNA polymerase alpha subunit
           [Helianthus decapetalus] gi|559769079|gb|AHB15509.1| RNA
           polymerase alpha subunit [Helianthus decapetalus]
           gi|559769165|gb|AHB15594.1| RNA polymerase alpha subunit
           [Helianthus hirsutus] gi|559769251|gb|AHB15679.1| RNA
           polymerase alpha subunit [Helianthus hirsutus]
           gi|559769337|gb|AHB15764.1| RNA polymerase alpha subunit
           [Helianthus tuberosus] gi|559769423|gb|AHB15849.1| RNA
           polymerase alpha subunit [Helianthus tuberosus]
           gi|559769509|gb|AHB15934.1| RNA polymerase alpha subunit
           [Helianthus tuberosus] gi|559769595|gb|AHB16019.1| RNA
           polymerase alpha subunit [Helianthus divaricatus]
           gi|559769681|gb|AHB16104.1| RNA polymerase alpha subunit
           [Helianthus giganteus] gi|559769853|gb|AHB16274.1| RNA
           polymerase alpha subunit [Helianthus grosseserratus]
           gi|559769939|gb|AHB16359.1| RNA polymerase alpha subunit
           [Helianthus grosseserratus] gi|559770025|gb|AHB16444.1|
           RNA polymerase alpha subunit [Helianthus grosseserratus]
           gi|559770111|gb|AHB16529.1| RNA polymerase alpha subunit
           [Helianthus grosseserratus] gi|559770197|gb|AHB16614.1|
           RNA polymerase alpha subunit [Helianthus decapetalus]
           gi|559770283|gb|AHB16699.1| RNA polymerase alpha subunit
           [Helianthus decapetalus] gi|559770369|gb|AHB16784.1| RNA
           polymerase alpha subunit [Helianthus decapetalus]
           gi|559770455|gb|AHB16869.1| RNA polymerase alpha subunit
           [Helianthus hirsutus] gi|559770541|gb|AHB16954.1| RNA
           polymerase alpha subunit [Helianthus hirsutus]
           gi|559770627|gb|AHB17039.1| RNA polymerase alpha subunit
           [Helianthus strumosus] gi|559770713|gb|AHB17124.1| RNA
           polymerase alpha subunit [Helianthus tuberosus]
           gi|559770799|gb|AHB17209.1| RNA polymerase alpha subunit
           [Helianthus tuberosus] gi|559770885|gb|AHB17294.1| RNA
           polymerase alpha subunit [Helianthus tuberosus]
           gi|559770971|gb|AHB17379.1| RNA polymerase alpha subunit
           [Helianthus maximiliani] gi|559771057|gb|AHB17464.1| RNA
           polymerase alpha subunit [Helianthus maximiliani]
           gi|559771143|gb|AHB17549.1| RNA polymerase alpha subunit
           [Helianthus maximiliani] gi|559771229|gb|AHB17634.1| RNA
           polymerase alpha subunit [Helianthus maximiliani]
          Length = 335

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHF IEDVKQI+  LEK+F 
Sbjct: 268 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILEKNFV 327

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 328 IDLPKNK 334


>gb|ABD47264.1| RNA polymerase alpha subunit (chloroplast) [Lactuca sativa]
          Length = 337

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHF IEDVKQI+  LEK+F 
Sbjct: 270 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILEKNFV 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>gb|ABD47177.1| RNA polymerase alpha subunit (chloroplast) [Helianthus annuus]
          Length = 337

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           KSIFIDQ ELPPRIY CLKRSNI+TLLDLLNNSQEDLMKMEHF IEDVKQI+  LEK+F 
Sbjct: 270 KSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILEKNFV 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336


>ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus]
           gi|161622341|ref|YP_001586213.1| RNA polymerase alpha
           subunit [Acorus americanus]
           gi|90101572|sp|Q3V502.1|RPOA_ACOCL RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|69215818|gb|AAZ03865.1| RNA polymerase alpha chain
           [Acorus americanus] gi|74381741|emb|CAI53826.1| RNA
           polymerase alpha subunit [Acorus calamus]
           gi|160369884|gb|ABX38775.1| RNA polymerase alpha subunit
           [Acorus americanus]
          Length = 337

 Score =  115 bits (289), Expect = 5e-24
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = +2

Query: 2   KSIFIDQLELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKMEHFHIEDVKQIVDNLEKHFA 181
           K IFIDQ ELPPR Y CLKRSNIHTLLDLL+NSQEDLMK+E+F IEDVKQI+D L+KHFA
Sbjct: 270 KCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMKIEYFRIEDVKQILDTLQKHFA 329

Query: 182 IDLPNNK 202
           IDLP NK
Sbjct: 330 IDLPKNK 336