BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00032342
         (807 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHE41669.1| RNA polymerase beta' subunit (chloroplast) [Paeon...   376   e-102
gb|ABQ15073.1| RNA polymerase beta' subunit [Paeonia brownii]         366   6e-99
gb|AHE41658.1| RNA polymerase beta' subunit, partial (chloroplas...   333   6e-89
gb|ABQ15060.1| RNA polymerase beta' subunit [Cercidiphyllum japo...   333   6e-89
gb|AHE41653.1| RNA polymerase beta' subunit (chloroplast) [Hamam...   331   2e-88
gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis]           331   2e-88
gb|ABQ15067.1| RNA polymerase beta' subunit [Hamamelis japonica]      330   4e-88
gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liqu...   329   8e-88
gb|ABQ15071.1| RNA polymerase beta' subunit [Liquidambar styraci...   329   8e-88
ref|YP_008963681.1| RNA polymerase beta' subunit (chloroplast) [...   328   2e-87
gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplas...   327   2e-87
gb|ADO13878.1| RNA polymerase beta subunit [Ilex crenata]             326   7e-87
gb|ADD31153.1| RNA polymerase beta'' subunit protein [Ilex cornuta]   326   7e-87
gb|ABQ15076.1| RNA polymerase beta' subunit [Pterostemon rotundi...   325   9e-87
gb|ABQ15068.1| RNA polymerase beta' subunit [Heuchera micrantha]      325   1e-86
gb|ABQ15065.1| RNA polymerase beta' subunit [Exbucklandia populnea]   325   1e-86
gb|AFK81289.1| RNA polymerase beta' subunit [Camellia sinensis v...   324   3e-86
gb|ADX99125.1| RNA polymerase beta II subunit [Stachytarpheta ca...   324   3e-86
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in...   323   4e-86
ref|YP_008963470.1| RNA polymerase beta' subunit (chloroplast) [...   323   5e-86

>gb|AHE41669.1| RNA polymerase beta' subunit (chloroplast) [Paeonia obovata]
          Length = 1392

 Score =  376 bits (966), Expect = e-102
 Identities = 189/193 (97%), Positives = 190/193 (98%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KPKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK
Sbjct: 664  KPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 723

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKTESKKWKSGIYIQRITPTKKRHFILV 588
            KI+LKIFSGDIYFPGEIDKIARHSGILIPPGVGKTESKKWKSGIYIQRITPTKKRHFILV
Sbjct: 724  KIELKIFSGDIYFPGEIDKIARHSGILIPPGVGKTESKKWKSGIYIQRITPTKKRHFILV 783

Query: 589  RPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVRTCL 768
            RPVVTYEITDGINLATPF GDLLQERDNMKLRVVNYILRGNGKPI GISDTSIQLVRTCL
Sbjct: 784  RPVVTYEITDGINLATPFQGDLLQERDNMKLRVVNYILRGNGKPIGGISDTSIQLVRTCL 843

Query: 769  VLNWDQDEKSSSA 807
            VLNWDQDEKSSSA
Sbjct: 844  VLNWDQDEKSSSA 856


>gb|ABQ15073.1| RNA polymerase beta' subunit [Paeonia brownii]
          Length = 862

 Score =  366 bits (939), Expect = 6e-99
 Identities = 183/193 (94%), Positives = 185/193 (95%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KPKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK
Sbjct: 211 KPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 270

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKTESKKWKSGIYIQRITPTKKRHFILV 588
           KI+LKIFSGDIYFPGEIDKIARH GILIPPG GKT+SKKWKSGIY QRITPTKKRHF LV
Sbjct: 271 KIELKIFSGDIYFPGEIDKIARHXGILIPPGAGKTKSKKWKSGIYXQRITPTKKRHFXLV 330

Query: 589 RPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVRTCL 768
           RPVV YEI DGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPI GISDTSIQLVRTCL
Sbjct: 331 RPVVXYEIXDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPILGISDTSIQLVRTCL 390

Query: 769 VLNWDQDEKSSSA 807
           VLNWDQDEKSSSA
Sbjct: 391 VLNWDQDEKSSSA 403


>gb|AHE41658.1| RNA polymerase beta' subunit, partial (chloroplast) [Cercidiphyllum
            japonicum]
          Length = 1372

 Score =  333 bits (853), Expect = 6e-89
 Identities = 168/195 (86%), Positives = 179/195 (91%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KP+YQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTRI LN RSRVGGLVRVER+KK
Sbjct: 641  KPRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRVERKKK 700

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGK---TESKKWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDIYFPGE DKIARHSGILIPPG GK    ESKK K+ IY+QRITPTKK++F
Sbjct: 701  RIELKIFSGDIYFPGETDKIARHSGILIPPGTGKKNSKESKKLKNWIYVQRITPTKKKYF 760

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRPVVTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 761  VLVRPVVTYEIADGINLATXFPQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 820

Query: 760  TCLVLNWDQDEKSSS 804
            TCLVLNWDQD+KSSS
Sbjct: 821  TCLVLNWDQDKKSSS 835


>gb|ABQ15060.1| RNA polymerase beta' subunit [Cercidiphyllum japonicum]
          Length = 798

 Score =  333 bits (853), Expect = 6e-89
 Identities = 168/195 (86%), Positives = 179/195 (91%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KP+YQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTRI LN RSRVGGLVRVER+KK
Sbjct: 207 KPRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRVERKKK 266

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGK---TESKKWKSGIYIQRITPTKKRHF 579
           +I+LKIFSGDIYFPGE DKIARHSGILIPPG GK    ESKK K+ IY+QRITPTKK++F
Sbjct: 267 RIELKIFSGDIYFPGETDKIARHSGILIPPGTGKKNSKESKKLKNWIYVQRITPTKKKYF 326

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 327 VLVRPVVTYEIADGINLATXFPQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 386

Query: 760 TCLVLNWDQDEKSSS 804
           TCLVLNWDQD+KSSS
Sbjct: 387 TCLVLNWDQDKKSSS 401


>gb|AHE41653.1| RNA polymerase beta' subunit (chloroplast) [Hamamelis mollis]
          Length = 1387

 Score =  331 bits (849), Expect = 2e-88
 Identities = 168/195 (86%), Positives = 180/195 (92%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KPKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTRI LNIRSRVGGLVRVE++KK
Sbjct: 659  KPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRVEKKKK 718

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDI+FPGE DKIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK++F
Sbjct: 719  RIELKIFSGDIHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKYF 778

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRPVVTYEI DGINLAT F  DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 779  VLVRPVVTYEIADGINLATLFAQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 838

Query: 760  TCLVLNWDQDEKSSS 804
            TCLVLNWDQD+KSSS
Sbjct: 839  TCLVLNWDQDKKSSS 853


>gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis]
          Length = 863

 Score =  331 bits (849), Expect = 2e-88
 Identities = 168/195 (86%), Positives = 180/195 (92%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KPKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTRI LNIRSRVGGLVRVE++KK
Sbjct: 210 KPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRVEKKKK 269

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
           +I+LKIFSGDI+FPGE DKIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK++F
Sbjct: 270 RIELKIFSGDIHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKYF 329

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT F  DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 330 VLVRPVVTYEIADGINLATLFAQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 389

Query: 760 TCLVLNWDQDEKSSS 804
           TCLVLNWDQD+KSSS
Sbjct: 390 TCLVLNWDQDKKSSS 404


>gb|ABQ15067.1| RNA polymerase beta' subunit [Hamamelis japonica]
          Length = 860

 Score =  330 bits (846), Expect = 4e-88
 Identities = 168/195 (86%), Positives = 179/195 (91%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KPKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTRI LNIRSRVGGLVRVE++KK
Sbjct: 207 KPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRVEKKKK 266

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            I+LKIFSGDI+FPGE DKIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK++F
Sbjct: 267 XIELKIFSGDIHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKYF 326

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT F  DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 327 VLVRPVVTYEIADGINLATLFAQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 386

Query: 760 TCLVLNWDQDEKSSS 804
           TCLVLNWDQD+KSSS
Sbjct: 387 TCLVLNWDQDKKSSS 401


>gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liquidambar styraciflua]
          Length = 1390

 Score =  329 bits (843), Expect = 8e-88
 Identities = 165/196 (84%), Positives = 180/196 (91%), Gaps = 3/196 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KP+YQ KVDRFFFIPEE HILPGSSSIMVRNNSIIG+DT+I LN RSRVGGLVRVER+KK
Sbjct: 659  KPRYQMKVDRFFFIPEEAHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRVERKKK 718

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDI+FPGE +KIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK+HF
Sbjct: 719  RIELKIFSGDIHFPGETNKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKHF 778

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRPVVTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 779  VLVRPVVTYEIADGINLATLFPQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 838

Query: 760  TCLVLNWDQDEKSSSA 807
            TCLVLNWDQD+KS+S+
Sbjct: 839  TCLVLNWDQDKKSASS 854


>gb|ABQ15071.1| RNA polymerase beta' subunit [Liquidambar styraciflua]
          Length = 830

 Score =  329 bits (843), Expect = 8e-88
 Identities = 165/196 (84%), Positives = 180/196 (91%), Gaps = 3/196 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KP+YQ KVDRFFFIPEE HILPGSSSIMVRNNSIIG+DT+I LN RSRVGGLVRVER+KK
Sbjct: 192 KPRYQMKVDRFFFIPEEAHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRVERKKK 251

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
           +I+LKIFSGDI+FPGE +KIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK+HF
Sbjct: 252 RIELKIFSGDIHFPGETNKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKHF 311

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 312 VLVRPVVTYEIADGINLATLFPQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 371

Query: 760 TCLVLNWDQDEKSSSA 807
           TCLVLNWDQD+KS+S+
Sbjct: 372 TCLVLNWDQDKKSASS 387


>ref|YP_008963681.1| RNA polymerase beta' subunit (chloroplast) [Liquidambar formosana]
            gi|491650361|gb|AGL13421.1| RNA polymerase beta' subunit
            (chloroplast) [Liquidambar formosana]
          Length = 1390

 Score =  328 bits (840), Expect = 2e-87
 Identities = 164/196 (83%), Positives = 180/196 (91%), Gaps = 3/196 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KP+YQ KVDRFFFIPEEVHILPGS SIMVRNNSIIG+DT+I LN RSRVGGLVRVER+KK
Sbjct: 659  KPRYQMKVDRFFFIPEEVHILPGSYSIMVRNNSIIGVDTQITLNTRSRVGGLVRVERKKK 718

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDI+FPGE +KIARHSGILIPPG GKT   ESKK+K+ IY+QRITPTKK+HF
Sbjct: 719  RIELKIFSGDIHFPGETNKIARHSGILIPPGTGKTNSKESKKFKNWIYVQRITPTKKKHF 778

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRP VTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 779  VLVRPAVTYEIADGINLATLFPQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 838

Query: 760  TCLVLNWDQDEKSSSA 807
            TCLVLNWDQD+KS+S+
Sbjct: 839  TCLVLNWDQDKKSASS 854


>gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
            championii]
          Length = 1375

 Score =  327 bits (839), Expect = 2e-87
 Identities = 164/195 (84%), Positives = 179/195 (91%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KP+YQ KVDRFFFIPEEVHILPGSS IMVRNNSIIG+DTRI LN RS+VGGLVRVER+KK
Sbjct: 647  KPRYQMKVDRFFFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRSQVGGLVRVERKKK 706

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDI+FPGE DKIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK++F
Sbjct: 707  RIELKIFSGDIHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKYF 766

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRPVVTYEI DGINLATPFP DLLQE+DNMKLRVVNYIL GNGKPI GI DTSIQLVR
Sbjct: 767  VLVRPVVTYEIADGINLATPFPQDLLQEKDNMKLRVVNYILYGNGKPIRGIYDTSIQLVR 826

Query: 760  TCLVLNWDQDEKSSS 804
            TCLVLNWDQ++KSSS
Sbjct: 827  TCLVLNWDQEKKSSS 841


>gb|ADO13878.1| RNA polymerase beta subunit [Ilex crenata]
          Length = 1182

 Score =  326 bits (835), Expect = 7e-87
 Identities = 162/196 (82%), Positives = 181/196 (92%), Gaps = 3/196 (1%)
 Frame = +1

Query: 226  IKPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQK 405
            ++PKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DT+I LN RSRVGGLVRVER+K
Sbjct: 642  VRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRVERKK 701

Query: 406  KKIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRH 576
            K+I+LKIFSGDI+FPGE DKI+RHSG+LIPPG GKT   ESKK K+ IY+QRITP KK++
Sbjct: 702  KRIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKKKY 761

Query: 577  FILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLV 756
            F+LVRPVVTYEITDGINLAT FP DLLQERDN++LRV+NYIL GNGKPI GISDTSIQLV
Sbjct: 762  FVLVRPVVTYEITDGINLATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQLV 821

Query: 757  RTCLVLNWDQDEKSSS 804
            RTCLVLNWDQD+KSSS
Sbjct: 822  RTCLVLNWDQDKKSSS 837


>gb|ADD31153.1| RNA polymerase beta'' subunit protein [Ilex cornuta]
          Length = 1384

 Score =  326 bits (835), Expect = 7e-87
 Identities = 162/196 (82%), Positives = 181/196 (92%), Gaps = 3/196 (1%)
 Frame = +1

Query: 226  IKPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQK 405
            ++PKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DT+I LN RSRVGGLVRVER+K
Sbjct: 656  VRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRVERKK 715

Query: 406  KKIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRH 576
            K+I+LKIFSGDI+FPGE DKI+RHSG+LIPPG GKT   ESKK K+ IY+QRITP KK++
Sbjct: 716  KRIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKKKY 775

Query: 577  FILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLV 756
            F+LVRPVVTYEITDGINLAT FP DLLQERDN++LRV+NYIL GNGKPI GISDTSIQLV
Sbjct: 776  FVLVRPVVTYEITDGINLATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQLV 835

Query: 757  RTCLVLNWDQDEKSSS 804
            RTCLVLNWDQD+KSSS
Sbjct: 836  RTCLVLNWDQDKKSSS 851


>gb|ABQ15076.1| RNA polymerase beta' subunit [Pterostemon rotundifolius]
          Length = 811

 Score =  325 bits (834), Expect = 9e-87
 Identities = 164/195 (84%), Positives = 179/195 (91%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KPKYQ +VDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTRI LN RSR+GGLVRVER+K+
Sbjct: 203 KPKYQMQVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNKRSRIGGLVRVERKKR 262

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            I+LKIFSGDIYFPGE DKIAR+SGILIPPG GKT   +SKK K+ IY+QRITPTKK++F
Sbjct: 263 GIELKIFSGDIYFPGETDKIARYSGILIPPGTGKTNSKKSKKLKNWIYVQRITPTKKKYF 322

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT FP DLLQE+DNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 323 VLVRPVVTYEIADGINLATLFPQDLLQEKDNMKLRVVNYILYGNGKPIGGISDTSIQLVR 382

Query: 760 TCLVLNWDQDEKSSS 804
           TCLVLNWDQD+KSSS
Sbjct: 383 TCLVLNWDQDKKSSS 397


>gb|ABQ15068.1| RNA polymerase beta' subunit [Heuchera micrantha]
          Length = 802

 Score =  325 bits (833), Expect = 1e-86
 Identities = 164/195 (84%), Positives = 178/195 (91%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KP+YQ +VDRFFFIPEEVHILPGSSSIMVRNNSIIG+ TRI LN RSRVGGLVR+ER+K+
Sbjct: 167 KPRYQMQVDRFFFIPEEVHILPGSSSIMVRNNSIIGVSTRITLNKRSRVGGLVRMERKKR 226

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            I+LKIFSGDIYFPGE DKIARHSGILIPPG GKT   ESKK K+ +Y+QRITPTKK++F
Sbjct: 227 GIELKIFSGDIYFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWLYVQRITPTKKKYF 286

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GISDTSIQLVR
Sbjct: 287 VLVRPVVTYEIADGINLATLFPEDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQLVR 346

Query: 760 TCLVLNWDQDEKSSS 804
           TCLVLNWDQD+KSSS
Sbjct: 347 TCLVLNWDQDKKSSS 361


>gb|ABQ15065.1| RNA polymerase beta' subunit [Exbucklandia populnea]
          Length = 802

 Score =  325 bits (833), Expect = 1e-86
 Identities = 165/195 (84%), Positives = 177/195 (90%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           KP+YQ KVDRFFFIPEEVHILPGSS IMVRNNSIIG+DTRI LN RSRVGGLVRVER+K+
Sbjct: 169 KPRYQMKVDRFFFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRSRVGGLVRVERKKR 228

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKT---ESKKWKSGIYIQRITPTKKRHF 579
            I+LKIFSGDI+FPGE DKIARHSGILIPPG GKT   ESKK K+ IY+QRITPTKK++F
Sbjct: 229 GIELKIFSGDIHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKKKYF 288

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEI DGINLAT FP DLLQERDNMKLRVVNYIL GNGKPI GI DTSIQLVR
Sbjct: 289 VLVRPVVTYEIADGINLATLFPQDLLQERDNMKLRVVNYILYGNGKPIRGIYDTSIQLVR 348

Query: 760 TCLVLNWDQDEKSSS 804
           TCLVLNWDQD+KSSS
Sbjct: 349 TCLVLNWDQDKKSSS 363


>gb|AFK81289.1| RNA polymerase beta' subunit [Camellia sinensis var. assamica]
          Length = 1374

 Score =  324 bits (830), Expect = 3e-86
 Identities = 159/192 (82%), Positives = 179/192 (93%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            +PKYQ KVDRFFFIPEEVH+LPGSSSIMVRNNSIIGIDT+I LN RSRVGGLVRVER+KK
Sbjct: 653  RPKYQMKVDRFFFIPEEVHLLPGSSSIMVRNNSIIGIDTQITLNTRSRVGGLVRVERKKK 712

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKTESKKWKSGIYIQRITPTKKRHFILV 588
            +I+LKIFSGD+YFPGE DKI+RHSGILIPPG+GK  SK  K+ IY+QRITPTKK++F+LV
Sbjct: 713  RIELKIFSGDLYFPGETDKISRHSGILIPPGIGKKNSKASKNWIYVQRITPTKKKYFVLV 772

Query: 589  RPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVRTCL 768
            RPVVTYEITDGINLAT FP DLLQERDN++L+VVNYIL GNGKPI GIS+TSIQLVRTCL
Sbjct: 773  RPVVTYEITDGINLATLFPPDLLQERDNVQLQVVNYILYGNGKPIRGISNTSIQLVRTCL 832

Query: 769  VLNWDQDEKSSS 804
            VLNWDQ++KSSS
Sbjct: 833  VLNWDQEKKSSS 844


>gb|ADX99125.1| RNA polymerase beta II subunit [Stachytarpheta cayennensis]
          Length = 683

 Score =  324 bits (830), Expect = 3e-86
 Identities = 159/196 (81%), Positives = 181/196 (92%), Gaps = 3/196 (1%)
 Frame = +1

Query: 229 KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
           +PKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DT+I LNIRSRVGGLVRVE++KK
Sbjct: 7   RPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNIRSRVGGLVRVEKKKK 66

Query: 409 KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGK---TESKKWKSGIYIQRITPTKKRHF 579
           +I+LKIFSGDI+FPGE DKI+RHSG+LIPPG GK    ESKKWK+ IY+QRITP+KK++F
Sbjct: 67  RIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKQNSKESKKWKNWIYVQRITPSKKKYF 126

Query: 580 ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
           +LVRPVVTYEITDGI LAT FP DLLQE+DN++LRVVNYIL GNGKPI GISDT+IQLVR
Sbjct: 127 VLVRPVVTYEITDGITLATLFPPDLLQEKDNVQLRVVNYILYGNGKPIRGISDTNIQLVR 186

Query: 760 TCLVLNWDQDEKSSSA 807
           TCLVLNWDQD+ SSS+
Sbjct: 187 TCLVLNWDQDKNSSSS 202


>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
            gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
            (chloroplast) [Sesamum indicum]
            gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
            indicum]
          Length = 1390

 Score =  323 bits (829), Expect = 4e-86
 Identities = 160/196 (81%), Positives = 180/196 (91%), Gaps = 3/196 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            +PKYQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DT+I LNIRSRV GLVRVER+KK
Sbjct: 657  RPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNIRSRVAGLVRVERKKK 716

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGK---TESKKWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDI+FPGE DKI+RHSG+LIPPG GK    ESKKWK+ IY+QRITP+KK++F
Sbjct: 717  RIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKQNCKESKKWKNWIYVQRITPSKKKYF 776

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRPVVTYEITDGI LAT FP DLLQERDN++LRVVNYIL GNGKPI GISDT+IQLVR
Sbjct: 777  VLVRPVVTYEITDGITLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTNIQLVR 836

Query: 760  TCLVLNWDQDEKSSSA 807
            TCLVLNWD D+KSSS+
Sbjct: 837  TCLVLNWDPDKKSSSS 852


>ref|YP_008963470.1| RNA polymerase beta' subunit (chloroplast) [Penthorum chinense]
            gi|403226771|gb|AFR25650.1| RNA polymerase beta' subunit
            (chloroplast) [Penthorum chinense]
          Length = 1387

 Score =  323 bits (828), Expect = 5e-86
 Identities = 164/195 (84%), Positives = 175/195 (89%), Gaps = 3/195 (1%)
 Frame = +1

Query: 229  KPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRVERQKK 408
            KP+YQ KVDRFFFIPEEVHILPGSSSIMVRNNSIIG+ TRI LN RSRVGGLVRVER+KK
Sbjct: 659  KPRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVGTRITLNTRSRVGGLVRVERKKK 718

Query: 409  KIKLKIFSGDIYFPGEIDKIARHSGILIPPGVGKTESK---KWKSGIYIQRITPTKKRHF 579
            +I+LKIFSGDIYFPGE DKIARHSGILIPPG GKT SK   K  + IY+QRITPTKK++F
Sbjct: 719  RIELKIFSGDIYFPGETDKIARHSGILIPPGTGKTNSKEYNKLNNWIYVQRITPTKKKYF 778

Query: 580  ILVRPVVTYEITDGINLATPFPGDLLQERDNMKLRVVNYILRGNGKPIWGISDTSIQLVR 759
            +LVRPVVTYEI DGINLAT FP D LQERDNMKLRVVNYIL GNGKP  GISDTSIQLVR
Sbjct: 779  VLVRPVVTYEIADGINLATLFPQDPLQERDNMKLRVVNYILYGNGKPTRGISDTSIQLVR 838

Query: 760  TCLVLNWDQDEKSSS 804
            TCLVLNWDQD+KSSS
Sbjct: 839  TCLVLNWDQDKKSSS 853