BLASTX nr result
ID: Paeonia23_contig00031326
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00031326
(255 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 48 5e-08
emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera] 38 5e-07
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 44 2e-06
emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera] 36 2e-06
emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera] 41 4e-06
emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera] 39 5e-06
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera] 44 5e-06
emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera] 44 5e-06
emb|CAN67245.1| hypothetical protein VITISV_008680 [Vitis vinifera] 44 5e-06
emb|CAN82483.1| hypothetical protein VITISV_006799 [Vitis vinifera] 44 5e-06
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 39 6e-06
emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera] 41 7e-06
emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera] 40 8e-06
emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera] 39 8e-06
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 37 8e-06
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
score: 11.19) [Arabidopsis thaliana]
Length = 1633
Score = 48.1 bits (113), Expect(3) = 5e-08
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -2
Query: 251 HCNIS-LSKHIRSAYVPRMHRSSSPFDLIHIDVWGP 147
HC IS L+K R AYV + +SSPFDLIH+D+WGP
Sbjct: 531 HCRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGP 566
Score = 30.0 bits (66), Expect(3) = 5e-08
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
Y++T +DD TR TWVY+
Sbjct: 577 YFLTLVDDCTRTTWVYM 593
Score = 23.5 bits (49), Expect(3) = 5e-08
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 61 KSEVFSFFQSFLQVIKTQFN 2
KSEV + F F+++I TQ+N
Sbjct: 597 KSEVSNIFPVFVKLIFTQYN 616
>emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]
Length = 1205
Score = 38.1 bits (87), Expect(3) = 5e-07
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -2
Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
L KH R ++ R++ R SPF+L+H DVWGP
Sbjct: 456 LGKHTRVSFPKRLNNRXKSPFELVHTDVWGP 486
Score = 35.0 bits (79), Expect(3) = 5e-07
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
Y+VT IDDY+RCTW++L
Sbjct: 497 YFVTFIDDYSRCTWLFL 513
Score = 25.0 bits (53), Expect(3) = 5e-07
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 61 KSEVFSFFQSFLQVIKTQFN 2
++E+FS F F I+TQFN
Sbjct: 517 RAELFSIFXKFYTEIQTQFN 536
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 254 FHCNIS-LSKHIRSAYVPRMHRSSSPFDLIHIDVWGP 147
FHC + +SK +V ++SS PFDLIHID WGP
Sbjct: 437 FHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGP 473
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL*RS 58
Y++T +DDY+R TWVYL R+
Sbjct: 484 YFLTIVDDYSRATWVYLLRN 503
>emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]
Length = 1257
Score = 35.8 bits (81), Expect(3) = 2e-06
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -2
Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
L KH R ++ R++ R+ S F+L+H DVWGP
Sbjct: 472 LGKHTRVSFPKRLNNRAKSXFELVHTDVWGP 502
Score = 35.0 bits (79), Expect(3) = 2e-06
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
Y+VT IDDY+RCTW++L
Sbjct: 513 YFVTFIDDYSRCTWLFL 529
Score = 25.0 bits (53), Expect(3) = 2e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 61 KSEVFSFFQSFLQVIKTQFN 2
++E+FS F F I+TQFN
Sbjct: 533 RAELFSIFXKFYTEIQTQFN 552
>emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]
Length = 1236
Score = 40.8 bits (94), Expect(2) = 4e-06
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = -2
Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
L KH R ++ R++ R+ SPF+L+HIDVWGP
Sbjct: 404 LGKHTRVSFPKRLNNRAKSPFELVHIDVWGP 434
Score = 35.4 bits (80), Expect(2) = 4e-06
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
Y+VT IDDY+RCTW++L ++ + F F F
Sbjct: 445 YFVTFIDDYSRCTWLFLMKNRAELFSIFQKF 475
>emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera]
Length = 1228
Score = 38.9 bits (89), Expect(2) = 5e-06
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -2
Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
L KH R ++ R++ R+ SPF+L+H DVWGP
Sbjct: 384 LGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 414
Score = 37.0 bits (84), Expect(2) = 5e-06
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
Y+VT IDDY+RCTW++L ++ K F F F
Sbjct: 425 YFVTFIDDYSRCTWLFLMKNRAKLFSIFQKF 455
>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
Length = 1636
Score = 43.5 bits (101), Expect(3) = 5e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
F C I LSK +RS + + ++ SSPF +IH D+WGPS
Sbjct: 548 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 585
Score = 28.5 bits (62), Expect(3) = 5e-06
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
++V+ IDD+TR TWV+L
Sbjct: 595 WFVSFIDDHTRLTWVFL 611
Score = 22.7 bits (47), Expect(3) = 5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 64 KKSEVFSFFQSFLQVIKTQF 5
+KSE F++F +I+TQF
Sbjct: 614 EKSETSQIFKNFKNMIQTQF 633
>emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]
Length = 1576
Score = 43.5 bits (101), Expect(3) = 5e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
F C I LSK +RS + + ++ SSPF +IH D+WGPS
Sbjct: 663 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 700
Score = 28.5 bits (62), Expect(3) = 5e-06
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
++V+ IDD+TR TWV+L
Sbjct: 710 WFVSFIDDHTRLTWVFL 726
Score = 22.7 bits (47), Expect(3) = 5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 64 KKSEVFSFFQSFLQVIKTQF 5
+KSE F++F +I+TQF
Sbjct: 729 EKSETSQIFKNFKNMIQTQF 748
>emb|CAN67245.1| hypothetical protein VITISV_008680 [Vitis vinifera]
Length = 1333
Score = 43.5 bits (101), Expect(3) = 5e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
F C I LSK +RS + + ++ SSPF +IH D+WGPS
Sbjct: 839 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 876
Score = 28.5 bits (62), Expect(3) = 5e-06
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
++V+ IDD+TR TWV+L
Sbjct: 886 WFVSFIDDHTRLTWVFL 902
Score = 22.7 bits (47), Expect(3) = 5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 64 KKSEVFSFFQSFLQVIKTQF 5
+KSE F++F +I+TQF
Sbjct: 905 EKSETSQIFKNFKNMIQTQF 924
>emb|CAN82483.1| hypothetical protein VITISV_006799 [Vitis vinifera]
Length = 1180
Score = 43.5 bits (101), Expect(3) = 5e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
F C I LSK +RS + + ++ SSPF +IH D+WGPS
Sbjct: 267 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 304
Score = 28.5 bits (62), Expect(3) = 5e-06
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
++V+ IDD+TR TWV+L
Sbjct: 314 WFVSFIDDHTRLTWVFL 330
Score = 22.7 bits (47), Expect(3) = 5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 64 KKSEVFSFFQSFLQVIKTQF 5
+KSE F++F +I+TQF
Sbjct: 333 EKSETSQIFKNFKNMIQTQF 352
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 39.3 bits (90), Expect(2) = 6e-06
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -2
Query: 230 KHIRSAYVPRM-HRSSSPFDLIHIDVWGPS 144
KHIRS++ + R+SSPF L+H D+WGPS
Sbjct: 517 KHIRSSFPSSVSQRASSPFALVHSDIWGPS 546
Score = 36.2 bits (82), Expect(2) = 6e-06
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
Y+VT IDDY+RCTWV+L
Sbjct: 556 YFVTFIDDYSRCTWVFL 572
>emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
Length = 1625
Score = 41.2 bits (95), Expect(3) = 7e-06
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -2
Query: 236 LSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
L+K R++Y M++S PFDLIH DVWGPS
Sbjct: 500 LAKSHRASYPMSMNKSMIPFDLIHSDVWGPS 530
Score = 26.9 bits (58), Expect(3) = 7e-06
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 61 KSEVFSFFQSFLQVIKTQFN 2
K EVF FQSF +++TQF+
Sbjct: 560 KDEVFXIFQSFHAMVQTQFS 579
Score = 26.2 bits (56), Expect(3) = 7e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL 67
++V +DD TR TW+YL
Sbjct: 540 WFVIFVDDCTRMTWLYL 556
>emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
Length = 1354
Score = 39.7 bits (91), Expect(2) = 8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -2
Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
L KH R ++ R++ R+ SPF+L+H DVWGP
Sbjct: 460 LGKHTRVSFTKRLNNRAKSPFELVHTDVWGP 490
Score = 35.4 bits (80), Expect(2) = 8e-06
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
Y+VT IDDY+RCTW++L ++ + F F F
Sbjct: 501 YFVTFIDDYSRCTWLFLXKNRAELFSIFQKF 531
>emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera]
Length = 1240
Score = 38.9 bits (89), Expect(2) = 8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -2
Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
L KH R ++ R++ R+ SPF+L+H DVWGP
Sbjct: 487 LGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 517
Score = 36.2 bits (82), Expect(2) = 8e-06
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
Y+VT IDDY+RCTW++L ++ ++ F F F
Sbjct: 528 YFVTFIDDYSRCTWLFLMKTRVELFSIFQKF 558
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 37.4 bits (85), Expect(3) = 8e-06
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -2
Query: 236 LSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
L K ++ Y RSS PFDL+H DVWG S
Sbjct: 362 LGKQVQLPYPSSTSRSSRPFDLVHSDVWGKS 392
Score = 30.4 bits (67), Expect(3) = 8e-06
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 117 YYVTCIDDYTRCTWVY 70
YYV +DDY+R TW+Y
Sbjct: 402 YYVIFVDDYSRYTWIY 417
Score = 26.2 bits (56), Expect(3) = 8e-06
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 61 KSEVFSFFQSFLQVIKTQFN 2
+S++ S +QSF Q+I TQF+
Sbjct: 422 RSQLISIYQSFAQMIHTQFS 441