BLASTX nr result

ID: Paeonia23_contig00031326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00031326
         (255 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    48   5e-08
emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]    38   5e-07
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    44   2e-06
emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]    36   2e-06
emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]    41   4e-06
emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera]    39   5e-06
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]    44   5e-06
emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]    44   5e-06
emb|CAN67245.1| hypothetical protein VITISV_008680 [Vitis vinifera]    44   5e-06
emb|CAN82483.1| hypothetical protein VITISV_006799 [Vitis vinifera]    44   5e-06
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    39   6e-06
emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]    41   7e-06
emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]    40   8e-06
emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera]    39   8e-06
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...    37   8e-06

>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 48.1 bits (113), Expect(3) = 5e-08
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = -2

Query: 251 HCNIS-LSKHIRSAYVPRMHRSSSPFDLIHIDVWGP 147
           HC IS L+K  R AYV   + +SSPFDLIH+D+WGP
Sbjct: 531 HCRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGP 566



 Score = 30.0 bits (66), Expect(3) = 5e-08
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           Y++T +DD TR TWVY+
Sbjct: 577 YFLTLVDDCTRTTWVYM 593



 Score = 23.5 bits (49), Expect(3) = 5e-08
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 61  KSEVFSFFQSFLQVIKTQFN 2
           KSEV + F  F+++I TQ+N
Sbjct: 597 KSEVSNIFPVFVKLIFTQYN 616


>emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]
          Length = 1205

 Score = 38.1 bits (87), Expect(3) = 5e-07
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
           L KH R ++  R++ R  SPF+L+H DVWGP
Sbjct: 456 LGKHTRVSFPKRLNNRXKSPFELVHTDVWGP 486



 Score = 35.0 bits (79), Expect(3) = 5e-07
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           Y+VT IDDY+RCTW++L
Sbjct: 497 YFVTFIDDYSRCTWLFL 513



 Score = 25.0 bits (53), Expect(3) = 5e-07
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 61  KSEVFSFFQSFLQVIKTQFN 2
           ++E+FS F  F   I+TQFN
Sbjct: 517 RAELFSIFXKFYTEIQTQFN 536


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 254 FHCNIS-LSKHIRSAYVPRMHRSSSPFDLIHIDVWGP 147
           FHC +  +SK     +V   ++SS PFDLIHID WGP
Sbjct: 437 FHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGP 473



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL*RS 58
           Y++T +DDY+R TWVYL R+
Sbjct: 484 YFLTIVDDYSRATWVYLLRN 503


>emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]
          Length = 1257

 Score = 35.8 bits (81), Expect(3) = 2e-06
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
           L KH R ++  R++ R+ S F+L+H DVWGP
Sbjct: 472 LGKHTRVSFPKRLNNRAKSXFELVHTDVWGP 502



 Score = 35.0 bits (79), Expect(3) = 2e-06
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           Y+VT IDDY+RCTW++L
Sbjct: 513 YFVTFIDDYSRCTWLFL 529



 Score = 25.0 bits (53), Expect(3) = 2e-06
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 61  KSEVFSFFQSFLQVIKTQFN 2
           ++E+FS F  F   I+TQFN
Sbjct: 533 RAELFSIFXKFYTEIQTQFN 552


>emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]
          Length = 1236

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
           L KH R ++  R++ R+ SPF+L+HIDVWGP
Sbjct: 404 LGKHTRVSFPKRLNNRAKSPFELVHIDVWGP 434



 Score = 35.4 bits (80), Expect(2) = 4e-06
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
           Y+VT IDDY+RCTW++L ++  + F  F  F
Sbjct: 445 YFVTFIDDYSRCTWLFLMKNRAELFSIFQKF 475


>emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera]
          Length = 1228

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
           L KH R ++  R++ R+ SPF+L+H DVWGP
Sbjct: 384 LGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 414



 Score = 37.0 bits (84), Expect(2) = 5e-06
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
           Y+VT IDDY+RCTW++L ++  K F  F  F
Sbjct: 425 YFVTFIDDYSRCTWLFLMKNRAKLFSIFQKF 455


>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
          Length = 1636

 Score = 43.5 bits (101), Expect(3) = 5e-06
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -2

Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
           F C I  LSK +RS +  + ++ SSPF +IH D+WGPS
Sbjct: 548 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 585



 Score = 28.5 bits (62), Expect(3) = 5e-06
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           ++V+ IDD+TR TWV+L
Sbjct: 595 WFVSFIDDHTRLTWVFL 611



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 64  KKSEVFSFFQSFLQVIKTQF 5
           +KSE    F++F  +I+TQF
Sbjct: 614 EKSETSQIFKNFKNMIQTQF 633


>emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]
          Length = 1576

 Score = 43.5 bits (101), Expect(3) = 5e-06
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -2

Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
           F C I  LSK +RS +  + ++ SSPF +IH D+WGPS
Sbjct: 663 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 700



 Score = 28.5 bits (62), Expect(3) = 5e-06
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           ++V+ IDD+TR TWV+L
Sbjct: 710 WFVSFIDDHTRLTWVFL 726



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 64  KKSEVFSFFQSFLQVIKTQF 5
           +KSE    F++F  +I+TQF
Sbjct: 729 EKSETSQIFKNFKNMIQTQF 748


>emb|CAN67245.1| hypothetical protein VITISV_008680 [Vitis vinifera]
          Length = 1333

 Score = 43.5 bits (101), Expect(3) = 5e-06
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -2

Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
           F C I  LSK +RS +  + ++ SSPF +IH D+WGPS
Sbjct: 839 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 876



 Score = 28.5 bits (62), Expect(3) = 5e-06
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           ++V+ IDD+TR TWV+L
Sbjct: 886 WFVSFIDDHTRLTWVFL 902



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 64  KKSEVFSFFQSFLQVIKTQF 5
           +KSE    F++F  +I+TQF
Sbjct: 905 EKSETSQIFKNFKNMIQTQF 924


>emb|CAN82483.1| hypothetical protein VITISV_006799 [Vitis vinifera]
          Length = 1180

 Score = 43.5 bits (101), Expect(3) = 5e-06
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -2

Query: 254 FHCNI-SLSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
           F C I  LSK +RS +  + ++ SSPF +IH D+WGPS
Sbjct: 267 FECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPS 304



 Score = 28.5 bits (62), Expect(3) = 5e-06
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           ++V+ IDD+TR TWV+L
Sbjct: 314 WFVSFIDDHTRLTWVFL 330



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 64  KKSEVFSFFQSFLQVIKTQF 5
           +KSE    F++F  +I+TQF
Sbjct: 333 EKSETSQIFKNFKNMIQTQF 352


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 39.3 bits (90), Expect(2) = 6e-06
 Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
 Frame = -2

Query: 230 KHIRSAYVPRM-HRSSSPFDLIHIDVWGPS 144
           KHIRS++   +  R+SSPF L+H D+WGPS
Sbjct: 517 KHIRSSFPSSVSQRASSPFALVHSDIWGPS 546



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           Y+VT IDDY+RCTWV+L
Sbjct: 556 YFVTFIDDYSRCTWVFL 572


>emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
          Length = 1625

 Score = 41.2 bits (95), Expect(3) = 7e-06
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
           L+K  R++Y   M++S  PFDLIH DVWGPS
Sbjct: 500 LAKSHRASYPMSMNKSMIPFDLIHSDVWGPS 530



 Score = 26.9 bits (58), Expect(3) = 7e-06
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 61  KSEVFSFFQSFLQVIKTQFN 2
           K EVF  FQSF  +++TQF+
Sbjct: 560 KDEVFXIFQSFHAMVQTQFS 579



 Score = 26.2 bits (56), Expect(3) = 7e-06
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL 67
           ++V  +DD TR TW+YL
Sbjct: 540 WFVIFVDDCTRMTWLYL 556


>emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
          Length = 1354

 Score = 39.7 bits (91), Expect(2) = 8e-06
 Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
           L KH R ++  R++ R+ SPF+L+H DVWGP
Sbjct: 460 LGKHTRVSFTKRLNNRAKSPFELVHTDVWGP 490



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
           Y+VT IDDY+RCTW++L ++  + F  F  F
Sbjct: 501 YFVTFIDDYSRCTWLFLXKNRAELFSIFQKF 531


>emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera]
          Length = 1240

 Score = 38.9 bits (89), Expect(2) = 8e-06
 Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMH-RSSSPFDLIHIDVWGP 147
           L KH R ++  R++ R+ SPF+L+H DVWGP
Sbjct: 487 LGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 517



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVYL*RS-LKFFRSFNHF 28
           Y+VT IDDY+RCTW++L ++ ++ F  F  F
Sbjct: 528 YFVTFIDDYSRCTWLFLMKTRVELFSIFQKF 558


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score = 37.4 bits (85), Expect(3) = 8e-06
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -2

Query: 236 LSKHIRSAYVPRMHRSSSPFDLIHIDVWGPS 144
           L K ++  Y     RSS PFDL+H DVWG S
Sbjct: 362 LGKQVQLPYPSSTSRSSRPFDLVHSDVWGKS 392



 Score = 30.4 bits (67), Expect(3) = 8e-06
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 117 YYVTCIDDYTRCTWVY 70
           YYV  +DDY+R TW+Y
Sbjct: 402 YYVIFVDDYSRYTWIY 417



 Score = 26.2 bits (56), Expect(3) = 8e-06
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 61  KSEVFSFFQSFLQVIKTQFN 2
           +S++ S +QSF Q+I TQF+
Sbjct: 422 RSQLISIYQSFAQMIHTQFS 441


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