BLASTX nr result
ID: Paeonia23_contig00030678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00030678
(646 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 83 2e-17
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 75 3e-16
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 68 7e-15
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 67 3e-14
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 75 6e-14
gb|AFB73912.1| polyprotein [Citrus sinensis] 71 1e-13
emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera] 67 4e-12
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera] 70 4e-12
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 70 4e-12
emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera] 69 5e-12
emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera] 69 5e-12
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera] 68 9e-12
emb|CAN77134.1| hypothetical protein VITISV_039954 [Vitis vinifera] 65 9e-12
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 62 1e-11
emb|CAN61645.1| hypothetical protein VITISV_036929 [Vitis vinifera] 68 1e-11
emb|CAN83069.1| hypothetical protein VITISV_008960 [Vitis vinifera] 69 1e-11
emb|CAN69037.1| hypothetical protein VITISV_026270 [Vitis vinifera] 65 3e-11
gb|AAF65309.1|AF229252_1 reverse transcriptase [Picea glauca] 65 3e-11
emb|CAN65331.1| hypothetical protein VITISV_018654 [Vitis vinifera] 60 2e-10
gb|AAD12997.1| gag-pol polyprotein [Zea mays] 56 2e-08
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 82.8 bits (203), Expect(2) = 2e-17
Identities = 60/138 (43%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I RD L LSQE YI++VLERF M+ +K V+TP+ L++ CP T KEKE M+
Sbjct: 409 IARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESMSH 468
Query: 345 IPYTK-*GRESY----VRNDVCMSMYLFCCWV-NESILK*FWYVESVKRILRLSSCTSNF 184
IPY+ G Y R D+ ++ L ++ N S K W E+VK ILR TSN
Sbjct: 469 IPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPS--KVHW--EAVKWILRYLRGTSNL 524
Query: 183 VLCYKGGEMPLRGNSDAD 130
LC+ GGE L G +DAD
Sbjct: 525 SLCFGGGEPILEGFTDAD 542
Score = 32.7 bits (73), Expect(2) = 2e-17
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 130 LGDDLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
+ DLD +KS F GAI W +K Q C+AL T
Sbjct: 543 MAGDLDNRKSTSGYLFKFARGAISWQSKLQKCVALST 579
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 51/137 (37%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I+R+ + + L LSQE YI++VLERF M+ +K V TP+ L++++CP T++EK MA
Sbjct: 1049 IVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAK 1108
Query: 345 IPYTK-*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
+PY+ G Y R D+ ++ + ++ E+ K W E+VK ILR T+
Sbjct: 1109 VPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL-ENPGKEHW--EAVKWILRYLRGTTGDC 1165
Query: 180 LCYKGGEMPLRGNSDAD 130
LC+ G + L+G +DAD
Sbjct: 1166 LCFGGSDPILKGYTDAD 1182
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 130 LGDDLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
+ D+D +KS F +GGAI W +K Q C+AL T
Sbjct: 1183 MAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALST 1219
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 68.2 bits (165), Expect(2) = 7e-15
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Frame = -2
Query: 531 VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEM 352
+ I+R+ K L +SQ +YI KVL R++M+ SK P G L++E CP T +E E+M
Sbjct: 1040 IQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDM 1099
Query: 351 A*IPYTK-*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSN 187
IPY+ G Y R D+C S+ + + + + W +VK IL+ T N
Sbjct: 1100 RNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRY-QSNPGRDHW--TAVKNILKYLRRTRN 1156
Query: 186 FVLCYKGGEMPLRGNSDADW 127
++L Y ++ L G +D+D+
Sbjct: 1157 YMLVYGAKDLILTGYTDSDF 1176
Score = 38.5 bits (88), Expect(2) = 7e-15
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D D +KS F LNGGA++W + KQ CIA TM
Sbjct: 1179 DKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTM 1213
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 67.4 bits (163), Expect(2) = 3e-14
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Frame = -2
Query: 531 VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEM 352
+ + RD +LL LSQ YI KVL +F M SK + P G L++E CP T +++E+M
Sbjct: 380 IQMTRDRKNRLLALSQAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKEQCPKTPQDEEKM 439
Query: 351 A*IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSN 187
+PY + G Y R D+C ++ + + + L W +VK IL+ T N
Sbjct: 440 RRVPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLD-HWV--AVKHILKYLRRTRN 496
Query: 186 FVLCYKGGEMPLRGNSDADW 127
++L Y G E+ G +D+D+
Sbjct: 497 YMLVYSGRELIPIGYTDSDF 516
Score = 37.4 bits (85), Expect(2) = 3e-14
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D D +KS F L GGAI+W + KQ C+A TM
Sbjct: 519 DRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTM 553
Score = 59.7 bits (143), Expect = 7e-07
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Frame = -3
Query: 638 DALPI*NDMGLVSATKAWLSSNFEMKNMGEASFVPEL-----RSLEIVLRSFSGYLKRLI 474
D L I ND+ +S K WL+S F+MK++GEAS++ + R ++ S + Y+ +++
Sbjct: 344 DILLIGNDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVL 403
Query: 473 LR---------RY*SGFGCVLLKLLIPQLRRDIA*HASFALTL*KKRKRWPEFHILNEVG 321
++ S G L K P+ +D +K +R P + VG
Sbjct: 404 VKFAMENSKKGNLPSRHGVHLSKEQCPKTPQDE-----------EKMRRVP---YASAVG 449
Query: 320 SLMYAMMCACLCICFAVGLMSRF 252
SLMYAM+C ICFAVG++SR+
Sbjct: 450 SLMYAMLCTRPDICFAVGVVSRY 472
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 75.1 bits (183), Expect(2) = 6e-14
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I+RD K L LSQE YI+KVLERF M +K V TP++ L ++ CP++ KEKEEM
Sbjct: 1047 IIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQR 1106
Query: 345 IPYTK-*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
+PY+ G Y R D+ ++ + +++ + + ++VK ILR TS+
Sbjct: 1107 VPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGRE---HWDAVKWILRYLRGTSSLS 1163
Query: 180 LCYKGGEMPLRGNSDAD 130
LC+ G+ L G +D+D
Sbjct: 1164 LCFGTGKPILTGYTDSD 1180
Score = 28.5 bits (62), Expect(2) = 6e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 130 LGDDLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
+ D+D +KS GGA+ W ++ Q C+ L T
Sbjct: 1181 MAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLST 1217
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 71.2 bits (173), Expect(2) = 1e-13
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I RD + + + LSQ+ Y+KK+L RF M+ K + TP+ L+ +CP+ E++EM+
Sbjct: 1030 IHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEMSR 1089
Query: 345 IPYTK*GRESYVRNDVCMSMYLFCCW---VNESILK*FWYVE--------SVKRILRLSS 199
+PY + V M+ C + +++ Y+ +VKRILR
Sbjct: 1090 VPYA---------SAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIR 1140
Query: 198 CTSNFVLCYKGGEMPLRGNSDADW 127
TSN LCY G E +RG D+D+
Sbjct: 1141 GTSNVALCYGGSEFTVRGYVDSDF 1164
Score = 31.2 bits (69), Expect(2) = 1e-13
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
DLD++KS F L G A+ W +K Q +AL T
Sbjct: 1167 DLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALST 1200
>emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera]
Length = 1381
Score = 66.6 bits (161), Expect(2) = 4e-12
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Frame = -2
Query: 555 G*SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPN 376
G + F + I RD S+ +LGLSQ+ YI KVL RF M DTPV KG + CP
Sbjct: 1103 GNASFVLGIQIHRDXSRGILGLSQKAYIDKVLSRFXMSNCAXGDTPVAKGDKFSLHQCPK 1162
Query: 375 TLKEKEEMA*IPYTK*GRESYVRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSC 196
EK++M PY S + VCM + + KR++R
Sbjct: 1163 NELEKKDMERFPYAS-AIGSLMYAQVCMDHW-----------------KKAKRVMRYLQR 1204
Query: 195 TSNFVLCY-KGGEMPLRGNSDADW 127
T +++L Y + + + G SD+D+
Sbjct: 1205 TKDYMLTYXRSSHLEIVGYSDSDF 1228
Score = 30.8 bits (68), Expect(2) = 4e-12
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 118 LDEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
LD ++S F+L GGA+ W + KQ +A TM
Sbjct: 1232 LDSRRSTSGYIFMLAGGAVSWKSVKQTLVASSTM 1265
>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
Length = 1356
Score = 69.7 bits (169), Expect(2) = 4e-12
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Frame = -2
Query: 555 G*SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPN 376
G + F + I RD S+ +LGLSQ TYI KVL+R+ M+ SK DTPV KG + CP
Sbjct: 1058 GDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPK 1117
Query: 375 TLKEKEEMA*IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRIL 211
E +EM IPY + G Y R D+ + + +++ + + ++ KR++
Sbjct: 1118 NSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMD---HWKAAKRVM 1174
Query: 210 RLSSCTSNFVLCYKG-GEMPLRGNSDADW 127
R T ++L Y+ ++ L G SD+D+
Sbjct: 1175 RYLQRTKEYMLTYRRLDQLELIGYSDSDF 1203
Score = 27.7 bits (60), Expect(2) = 4e-12
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 115 DEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D ++S +LL GGAI W + KQ + TM
Sbjct: 1208 DSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTM 1240
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 69.7 bits (169), Expect(2) = 4e-12
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Frame = -2
Query: 555 G*SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPN 376
G + F + I RD S+ +LGLSQ TYI KVL+R+ M+ SK DTPV KG + CP
Sbjct: 952 GDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPK 1011
Query: 375 TLKEKEEMA*IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRIL 211
E +EM IPY + G Y R D+ + + +++ + + + KR++
Sbjct: 1012 NXLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMD---HWRAAKRVM 1068
Query: 210 RLSSCTSNFVLCYKG-GEMPLRGNSDADW 127
R T ++L Y+ ++ L G SD+D+
Sbjct: 1069 RYLQRTKEYMLTYRRLDQLELIGYSDSDF 1097
Score = 27.7 bits (60), Expect(2) = 4e-12
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 115 DEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D ++S +LL GGAI W + KQ + TM
Sbjct: 1102 DSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTM 1134
>emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]
Length = 1601
Score = 69.3 bits (168), Expect(2) = 5e-12
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Frame = -2
Query: 555 G*SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPN 376
G + F + I RD S+ +LGLSQ TYI KVL+R+ M+ SK DTPV KG + CP
Sbjct: 1303 GDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPK 1362
Query: 375 TLKEKEEMA*IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRIL 211
E +EM IPY + G Y R D+ + + +++ + + + KR++
Sbjct: 1363 NSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMD---HWRAAKRVM 1419
Query: 210 RLSSCTSNFVLCYKG-GEMPLRGNSDADW 127
R T ++L Y+ ++ L G SD+D+
Sbjct: 1420 RYLQRTKEYMLTYRRLDQLELIGYSDSDF 1448
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 115 DEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D ++S +LL GGAI W + KQ + TM
Sbjct: 1453 DSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTM 1485
>emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]
Length = 1354
Score = 69.3 bits (168), Expect(2) = 5e-12
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Frame = -2
Query: 555 G*SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPN 376
G + F + I RD S+ +LGLSQ TYI KVL+R+ M+ SK DTPV KG + CP
Sbjct: 1056 GDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPK 1115
Query: 375 TLKEKEEMA*IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRIL 211
E +EM IPY + G Y R D+ + + +++ + + + KR++
Sbjct: 1116 NSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMD---HWRAAKRVM 1172
Query: 210 RLSSCTSNFVLCYKG-GEMPLRGNSDADW 127
R T ++L Y+ ++ L G SD+D+
Sbjct: 1173 RYLQRTKEYMLTYRRLDQLELIGYSDSDF 1201
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 115 DEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D ++S +LL GGAI W + KQ + TM
Sbjct: 1206 DSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTM 1238
>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
Length = 1236
Score = 68.2 bits (165), Expect(2) = 9e-12
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I+RD + L LSQ Y+KKVL RF M +K V TP+ L++E P T +E++ M+
Sbjct: 958 IIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSK 1017
Query: 345 IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
+PY + G Y R D+ ++ + +++ K W E+VK ILR + +
Sbjct: 1018 VPYASAIGSLMYTMVCTRPDIAHAVGVVSRFMSRP-GKQHW--EAVKWILRYLKGSLDTC 1074
Query: 180 LCYKGGEMPLRGNSDADWV 124
LC+ G + L+G DAD+V
Sbjct: 1075 LCFTGASLKLQGYGDADFV 1093
Score = 28.1 bits (61), Expect(2) = 9e-12
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
D+D +KS F L+G AI W++ Q + L T
Sbjct: 1095 DIDSRKSTTGFVFTLSGTAISWASNLQKIVTLST 1128
>emb|CAN77134.1| hypothetical protein VITISV_039954 [Vitis vinifera]
Length = 632
Score = 65.5 bits (158), Expect(2) = 9e-12
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I+RD + L LSQ Y+KKVL RF M +K V TP++ L++E P T +EK+ M+
Sbjct: 434 IIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLDSHFKLSKEQSPKTEEEKDHMSK 493
Query: 345 IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
+PY + G Y R ++ ++ + +++ K W E VK ILR + +
Sbjct: 494 VPYASAIGSLMYAMVCTRPNIAHAVGVVSRFMSRP-GKQHW--EVVKWILRYLKGSLDTC 550
Query: 180 LCYKGGEMPLRGNSDADW 127
LC+ G + L+G DAD+
Sbjct: 551 LCFTGASLKLQGYVDADF 568
Score = 30.8 bits (68), Expect(2) = 9e-12
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
D+D +KS F L G AI W++ Q + LFT
Sbjct: 571 DIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLFT 604
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I RD + + LSQ+ Y++KVL RF M+ + TP+ + L+ + P++ E+ EM+
Sbjct: 1026 IHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSR 1085
Query: 345 IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
+PY + G Y R D+ ++ ++ + K W +VKRILR TS
Sbjct: 1086 VPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADP-GKEHW--NAVKRILRYIRGTSGAA 1142
Query: 180 LCYKGGEMPLRGNSDADW 127
LC+ G E +RG D+D+
Sbjct: 1143 LCFGGSEFTIRGYVDSDF 1160
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
DLD++KS F L GGA+ W +K Q +AL T
Sbjct: 1163 DLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALST 1196
>emb|CAN61645.1| hypothetical protein VITISV_036929 [Vitis vinifera]
Length = 1014
Score = 68.2 bits (165), Expect(2) = 1e-11
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I RD S+ +LGLSQ TYI KVL+R+ M+ SK DTPV KG + CP E +EM
Sbjct: 776 IHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQK 835
Query: 345 IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
IPY + G Y R D+ + + +++ + + + KR++R T ++
Sbjct: 836 IPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMD---HWRAAKRVMRYLQRTKEYM 892
Query: 180 LCYKG-GEMPLRGNSDADW 127
L Y+ ++ L G SD+D+
Sbjct: 893 LTYRRLDQLELIGYSDSDF 911
Score = 27.7 bits (60), Expect(2) = 1e-11
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 115 DEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D ++S +LL GGAI W + KQ + TM
Sbjct: 916 DSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTM 948
>emb|CAN83069.1| hypothetical protein VITISV_008960 [Vitis vinifera]
Length = 517
Score = 68.9 bits (167), Expect(2) = 1e-11
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Frame = -2
Query: 555 G*SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPN 376
G + F + I RD SK +L LSQ+ YI KVL RF M + DTPVEKG+ + CP
Sbjct: 279 GNASFVLGIQIYRDHSKGILRLSQKAYINKVLSRFGMNNCTLEDTPVEKGNKFSLHQCPK 338
Query: 375 TLKEKEEMA*IPYTK*GRESYVRNDVCMSM---YLFCCWVNESILK*FWYVESVKRILRL 205
EK++M PY S + VCM + Y+ + ++ KR++R
Sbjct: 339 NELEKKDMERFPYAS-AVGSLIYAQVCMCLDIAYIVGMLSKYLTNSGMDHWKNAKRVMRY 397
Query: 204 SSCTSNFVLCY-KGGEMPLRGNSDADW 127
T ++L Y + + + G SD+D+
Sbjct: 398 LQRTKYYMLTYRRSSHLEIVGYSDSDF 424
Score = 26.9 bits (58), Expect(2) = 1e-11
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 118 LDEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
LD ++S F+L G AI W + KQ IA T+
Sbjct: 428 LDSRRSTSGYIFMLAGRAISWKSVKQTLIASSTI 461
>emb|CAN69037.1| hypothetical protein VITISV_026270 [Vitis vinifera]
Length = 492
Score = 65.1 bits (157), Expect(2) = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Frame = -2
Query: 531 VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEM 352
+ I RD S+ +LGLSQ+ YI VLERF M++ P+ KG L++ CP E+E+M
Sbjct: 206 IEIFRDRSRGVLGLSQKGYIDWVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNMEREQM 265
Query: 351 A*IPYTK-----*GRESYVRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSN 187
IPY ++ R D+ + +F + ++ F + ++ K+++R T +
Sbjct: 266 KKIPYASAVGSLMYAQTCTRPDISFVVGMFGRYQSD---PGFEHWKAAKKVMRYLQGTKD 322
Query: 186 FVLCYKGGE-MPLRGNSDADW 127
++L YK E + + G SD+D+
Sbjct: 323 YMLTYKRSEQLEVVGYSDSDY 343
Score = 29.6 bits (65), Expect(2) = 3e-11
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 127 GDDLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
G LD KS F+L GAI W ++KQ A TM
Sbjct: 344 GGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTM 380
>gb|AAF65309.1|AF229252_1 reverse transcriptase [Picea glauca]
Length = 542
Score = 64.7 bits (156), Expect(2) = 3e-11
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Frame = -2
Query: 525 ILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEMA* 346
I RD + + L L+Q Y++ +L+RF + SK V P+ G +L+ + CP +E+E+M+
Sbjct: 308 IKRDRANRKLWLNQRKYVETILQRFNIHGSKPVKVPIPIGVNLSADQCPKIQEEEEDMSH 367
Query: 345 IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSNFV 181
+PY + G Y R D+ ++ ++++ + K W +VKR+ R T+++
Sbjct: 368 VPYASAVGSLMYAMVCTRPDIAHAVGFLSRYMSK-LGKEHW--TTVKRVFRYLHGTTSYG 424
Query: 180 LCYKGGE-----MPLRGNSDADWV 124
LCY+G + + G DADWV
Sbjct: 425 LCYQGRSGLDRVVDIHGFVDADWV 448
Score = 29.6 bits (65), Expect(2) = 3e-11
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1
Query: 121 DLDEQKSIFSCAFLLNGGAILWSNKKQFCIALFT 20
DLD +S F L GGAI W +K Q +AL T
Sbjct: 450 DLDHIRSTSGYVFNLFGGAISWMSKIQALVALST 483
>emb|CAN65331.1| hypothetical protein VITISV_018654 [Vitis vinifera]
Length = 1218
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Frame = -2
Query: 549 SKFCP*VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTL 370
SKF V I RD + +LGLSQ+ YI KVL RF M DTPV KG+ + CP
Sbjct: 925 SKF---VLIYRDRPRGILGLSQKAYIDKVLSRFGMSNCTPRDTPVAKGNKFSLLQCPKNE 981
Query: 369 KEKEEMA*IPYTK*GRESYVRNDVCMSM---YLFCCWVNESILK*FWYVESVKRILRLSS 199
EK++M PY S + VC + Y+ + + KR++R
Sbjct: 982 LEKKDMERFPYAS-AIGSLMYAQVCTRLNIAYIIGMLGRYLSNPGMDHWKKAKRVMRYLQ 1040
Query: 198 CTSNFVLCY-KGGEMPLRGNSDADWVMIWTSK 106
T +++L Y + + + G SD+D+ SK
Sbjct: 1041 RTKDYMLTYRRSSHLEIVGYSDSDFAGCLDSK 1072
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 118 LDEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
LD ++S F+L GGAI W + KQ IA TM
Sbjct: 1069 LDSKRSTSGYIFMLAGGAISWKSVKQTLIASSTM 1102
>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
Length = 1406
Score = 56.2 bits (134), Expect(2) = 2e-08
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Frame = -2
Query: 531 VAILRDCSKKLLGLSQETYIKKVLERFRMRTSKIVDTPVEKGHSLTRELCPNTLKEKEEM 352
+ I RD K +LGLSQ++YI+ VL+R+ M P+ KG CP EK +M
Sbjct: 1120 IEIHRDRQKGVLGLSQKSYIENVLKRYNMHKCNASPGPIVKGDKFGEYQCPKNQYEKNKM 1179
Query: 351 A*IPY-TK*GRESY----VRNDVCMSMYLFCCWVNESILK*FWYVESVKRILRLSSCTSN 187
+PY + G Y R D+ + + + ++ + ++VK+ LR T
Sbjct: 1180 KSVPYASAIGSIMYAQVCTRPDLAFTTGMLGRYQKNPGIE---HWKAVKKALRYLQGTKG 1236
Query: 186 FVLCY-KGGEMPLRGNSDADW 127
+L Y + + + G +DADW
Sbjct: 1237 LMLTYRRSNSLQIVGYADADW 1257
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 115 DEQKSIFSCAFLLNGGAILWSNKKQFCIALFTM 17
D KS F+L+GGAI W + KQ A TM
Sbjct: 1262 DTLKSTSGYVFMLSGGAISWKSCKQTARASSTM 1294