BLASTX nr result
ID: Paeonia23_contig00029196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00029196
(568 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1] 74 3e-11
ref|XP_007227303.1| hypothetical protein PRUPE_ppa016783mg, part... 72 1e-10
ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegan... 71 2e-10
ref|XP_007448710.1| PREDICTED: polyubiquitin-C [Lipotes vexillifer] 69 7e-10
ref|XP_007099135.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin C ... 69 7e-10
ref|XP_006944387.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin C ... 69 7e-10
pir||S43306 polyubiquitin 6 - Geodia cydonium 69 7e-10
ref|XP_005898877.1| PREDICTED: polyubiquitin-C isoform X1 [Bos m... 69 7e-10
ref|XP_005657362.1| PREDICTED: polyubiquitin-C isoform X7 [Sus s... 69 7e-10
ref|XP_005657360.1| PREDICTED: polyubiquitin-C isoform X5 [Sus s... 69 7e-10
gb|AFV28813.1| polyubiquitin-like protein, partial [Anteholostic... 69 7e-10
ref|XP_004310480.1| PREDICTED: polyubiquitin-C, partial [Tursiop... 69 7e-10
ref|NP_001193236.1| polyubiquitin-C [Bos taurus] gi|555973765|re... 69 7e-10
ref|XP_004276694.1| PREDICTED: polyubiquitin-B-like [Orcinus orca] 69 7e-10
ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoformX1 [Sus sc... 69 7e-10
ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp.... 69 9e-10
gb|EXX74854.1| ubiquitin [Rhizophagus irregularis DAOM 197198w] 69 1e-09
gb|EXX74853.1| ubiquitin [Rhizophagus irregularis DAOM 197198w] 69 1e-09
gb|ESA16475.1| hypothetical protein GLOINDRAFT_345541 [Rhizophag... 69 1e-09
ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyr... 69 1e-09
>gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
Length = 463
Score = 73.6 bits (179), Expect = 3e-11
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V S T+ ++K I + IP Q LI +GK L + T+ D +K +
Sbjct: 236 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ G+ ++V+ TI DVK IQ I I Q L +
Sbjct: 296 HLVLRLRGAFRVLDSMQIFVKWLHGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIF 355
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L+D +T+SDY + T+ + +R +Q+F+ G K ++E+E+ DT N
Sbjct: 356 ASKQLDDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVESSDTIDNV 412
Query: 38 LAEIMD 21
A+I D
Sbjct: 413 KAKIQD 418
>ref|XP_007227303.1| hypothetical protein PRUPE_ppa016783mg, partial [Prunus persica]
gi|462424239|gb|EMJ28502.1| hypothetical protein
PRUPE_ppa016783mg, partial [Prunus persica]
Length = 351
Score = 72.0 bits (175), Expect = 1e-10
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Frame = -3
Query: 563 IGSATSIVVFS---FTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNP 396
I S +VF + T+ DIK +I + I + TL++ GK L + T+ + R
Sbjct: 75 IPSNQKTIVFEAKGYYTINDIKSMIQLKEGIQLDQYTLVYGGKLLQDYRTLASLDIRTES 134
Query: 395 VVHAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGL 216
++ IF D I V+ GK+ K++VK YT+ DVK +++S P + +
Sbjct: 135 TLYMIFNPRDVMPIF------VKTPSGKIVKVEVKVLYTLQDVKAIVESFIGCPVADCRI 188
Query: 215 SYNHKKLNDWKTVSDYGFKSRDTVTMEIRSSDVQLFIYARKGGENKGTSIEIEAEDTNTL 36
Y +L D KT++ Y + + T+E+ S +Q+FI G +I ++ +NT+
Sbjct: 189 IYAGNELQDCKTLAFYNIE--ENSTLEVLPSWIQIFIKTW-----NGKTITLDVARSNTV 241
Query: 35 AEIMDMI 15
E+ D I
Sbjct: 242 REVKDKI 248
>ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName:
Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor gi|373219552|emb|CCD68779.1| Protein UBQ-1,
isoform a [Caenorhabditis elegans]
Length = 838
Score = 70.9 bits (172), Expect = 2e-10
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
LIG ++ V + T+ ++K I + IP Q LI +GK L + T+ D +K +
Sbjct: 388 LIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 447
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 448 HLVL------RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 501
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+EA DT N
Sbjct: 502 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEASDTIENV 558
Query: 38 LAEIMD 21
A+I D
Sbjct: 559 KAKIQD 564
>ref|XP_007448710.1| PREDICTED: polyubiquitin-C [Lipotes vexillifer]
Length = 462
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_007099135.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin C [Panthera tigris
altaica]
Length = 394
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_006944387.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin C [Felis catus]
Length = 254
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>pir||S43306 polyubiquitin 6 - Geodia cydonium
Length = 448
Score = 69.3 bits (168), Expect = 7e-10
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIGRKNPVVH 387
L G ++ V + T+ ++K I + IP Q LI +GK L + T+ D + +H
Sbjct: 158 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLH 217
Query: 386 AIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSYN 207
+ Q K LT GK ++V+ TI +VK IQ IP Q L +
Sbjct: 218 LVRLRGGMQIFVKTLT-------GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 270
Query: 206 HKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NTL 36
K+L D +T+SDY + ++T+ + +R +Q+F+ G K ++E+EA DT N
Sbjct: 271 GKQLEDGRTLSDYNIQ-KETLHLVVRLRGGMQIFVKTLTG---KTITLEVEASDTIENVK 326
Query: 35 AEIMD 21
A+I D
Sbjct: 327 AKIQD 331
>ref|XP_005898877.1| PREDICTED: polyubiquitin-C isoform X1 [Bos mutus]
Length = 918
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_005657362.1| PREDICTED: polyubiquitin-C isoform X7 [Sus scrofa]
Length = 381
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_005657360.1| PREDICTED: polyubiquitin-C isoform X5 [Sus scrofa]
Length = 536
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 11 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 70
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 71 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 124
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 125 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 181
Query: 38 LAEIMD 21
A+I D
Sbjct: 182 KAKIQD 187
>gb|AFV28813.1| polyubiquitin-like protein, partial [Anteholosticha parawarreni]
Length = 264
Score = 69.3 bits (168), Expect = 7e-10
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++K I + IP Q LI +GKCL + + D +K +
Sbjct: 8 LTGKTITLDVEPSDTIENVKAKIQDKEGIPPEQQRLIFAGKCLEDGRAISDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + Q I V+ G+ ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVLRLRGGQQIF------VKTLTGRTITLEVEHSDTIENVKAKIQDKEGIPPEQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY T+ + +R VQ+F+ G K ++++E D+ N
Sbjct: 122 GGKQLEDGRTISDYNINKEATIHLVLRLRGGVQIFVKTLTG---KSITLDVEPSDSIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_004310480.1| PREDICTED: polyubiquitin-C, partial [Tursiops truncatus]
Length = 377
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|NP_001193236.1| polyubiquitin-C [Bos taurus] gi|555973765|ref|XP_005898878.1|
PREDICTED: polyubiquitin-C isoform X2 [Bos mutus]
gi|555973767|ref|XP_005898879.1| PREDICTED:
polyubiquitin-C isoform X3 [Bos mutus]
gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName:
Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 690
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_004276694.1| PREDICTED: polyubiquitin-B-like [Orcinus orca]
Length = 229
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoformX1 [Sus scrofa]
gi|350592416|ref|XP_003483460.1| PREDICTED:
polyubiquitin-C isoformX2 [Sus scrofa]
gi|350592418|ref|XP_003483461.1| PREDICTED:
polyubiquitin-C isoformX3 [Sus scrofa]
gi|350592420|ref|XP_003483462.1| PREDICTED:
polyubiquitin-C isoformX4 [Sus scrofa]
gi|545868585|ref|XP_005657361.1| PREDICTED:
polyubiquitin-C isoform X6 [Sus scrofa]
gi|302595945|sp|P0CG68.1|UBC_PIG RecName:
Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 533
Score = 69.3 bits (168), Expect = 7e-10
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V T+ ++KG I ++ IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T+SDY + T+ + +R +Q+F+ G K ++E+E DT N
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVEPSDTIENV 178
Query: 38 LAEIMD 21
A+I D
Sbjct: 179 KAKIQD 184
>ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317946|gb|EFH48368.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 68.9 bits (167), Expect = 9e-10
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V S T+ ++K I + IP+ Q LI +GK L + T+ D +K +
Sbjct: 9 LTGKTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTL 68
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI +VK IQ IP Q L +
Sbjct: 69 HLVL------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 122
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T++DY + T+ + +R +Q+F+ G K ++E+E+ DT N
Sbjct: 123 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVESSDTIDNV 179
Query: 38 LAEIMD 21
A+I D
Sbjct: 180 KAKIQD 185
>gb|EXX74854.1| ubiquitin [Rhizophagus irregularis DAOM 197198w]
Length = 213
Score = 68.6 bits (166), Expect = 1e-09
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V S T+ +KG I + IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVESSDTIDQVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVESSDTIDQVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDTNTLA 33
K+L D +T+SDY + T+ + +R +Q+F+ G +I +E E ++T+
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVESSDTIE 176
Query: 32 EIMDMIPQEE 3
++ I +E
Sbjct: 177 QVKTKIQDKE 186
>gb|EXX74853.1| ubiquitin [Rhizophagus irregularis DAOM 197198w]
Length = 187
Score = 68.6 bits (166), Expect = 1e-09
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V S T+ +KG I + IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVESSDTIDQVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVESSDTIDQVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDTNTLA 33
K+L D +T+SDY + T+ + +R +Q+F+ G +I +E E ++T+
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVESSDTIE 176
Query: 32 EIMDMIPQEE 3
++ I +E
Sbjct: 177 QVKTKIQDKE 186
>gb|ESA16475.1| hypothetical protein GLOINDRAFT_345541 [Rhizophagus irregularis
DAOM 181602] gi|595491227|gb|EXX74852.1| ubiquitin
[Rhizophagus irregularis DAOM 197198w]
Length = 229
Score = 68.6 bits (166), Expect = 1e-09
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V S T+ +KG I + IP Q LI +GK L + T+ D +K +
Sbjct: 8 LTGKTITLEVESSDTIDQVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ GK ++V+ TI VK IQ IP Q L +
Sbjct: 68 HLVL------RLRGGMQIFVKTLTGKTITLEVESSDTIDQVKAKIQDKEGIPPDQQRLIF 121
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDTNTLA 33
K+L D +T+SDY + T+ + +R +Q+F+ G +I +E E ++T+
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVESSDTIE 176
Query: 32 EIMDMIPQEE 3
++ I +E
Sbjct: 177 QVKTKIQDKE 186
>ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis
lyrata subsp. lyrata]
Length = 537
Score = 68.6 bits (166), Expect = 1e-09
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Frame = -3
Query: 566 LIGSATSIVVFSFTTVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVV 390
L G ++ V S T+ ++K I + IP Q LI +GK L + T+ D +K +
Sbjct: 239 LTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 298
Query: 389 HAIFGENDDQTISKDLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSY 210
H + + + + V+ G+ ++V+ TI +VK IQ +IPA Q L +
Sbjct: 299 HLVL------RLRGGMQIFVKTLTGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIF 352
Query: 209 NHKKLNDWKTVSDYGFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NT 39
K+L D +T++DY + T+ + +R +Q+F+ G K ++E+E+ DT N
Sbjct: 353 AGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVKTLTG---KTITLEVESSDTIDNV 409
Query: 38 LAEIMD 21
A+I D
Sbjct: 410 KAKIQD 415
Score = 60.5 bits (145), Expect = 3e-07
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Frame = -3
Query: 524 TVRDIKGVISKEMEIPISAQTLIHSGKCLLNDATVEDIG-RKNPVVHAIFGENDDQTISK 348
T+ ++K I + IP+ Q LI +GK L + T+ D +K ++H +
Sbjct: 25 TINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESILHLAL------RLRG 78
Query: 347 DLTLKVEMARGKLKKIKVKKWYTISDVKVVIQSISDIPASIQGLSYNHKKLNDWKTVSDY 168
+ + V+ GK ++V+ TI +VK IQ I Q L + K+L D +T++DY
Sbjct: 79 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADY 138
Query: 167 GFKSRDTVTMEIR-SSDVQLFIYARKGGENKGTSIEIEAEDT--NTLAEIMD 21
+ T+ + +R +Q+F+ G K ++E+E+ DT N A+I D
Sbjct: 139 NIQKESTLHLVLRLRGGMQIFVKTLTG---KTITLEVESSDTIDNVKAKIED 187