BLASTX nr result
ID: Paeonia23_contig00029178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00029178
(451 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The... 48 5e-09
gb|EXB77633.1| DNA-directed RNA polymerase 2B [Morus notabilis] 46 7e-09
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 48 1e-08
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 47 2e-08
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu... 53 3e-08
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 50 4e-08
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 50 4e-08
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 50 4e-08
ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 47 9e-08
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 48 1e-07
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 48 3e-07
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 48 3e-07
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 47 3e-07
ref|XP_006585822.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 47 3e-07
ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutr... 48 4e-07
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 48 9e-07
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 47 1e-06
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 48 1e-06
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 48 1e-06
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 48 1e-06
>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1100
Score = 48.1 bits (113), Expect(3) = 5e-09
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWEQ A EY++LL M E KLAPNL Y+K L L W
Sbjct: 201 KIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGW 240
Score = 30.4 bits (67), Expect(3) = 5e-09
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 71 RLERLARGMGQGKYQFLQRRQ 133
R + + RGMG+ KY+FL+RRQ
Sbjct: 179 RCQIIERGMGESKYRFLRRRQ 199
Score = 26.6 bits (57), Expect(3) = 5e-09
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 259 WFEPLYVAITMEEELY 306
WFEPL AI E+ELY
Sbjct: 240 WFEPLRDAIIKEQELY 255
>gb|EXB77633.1| DNA-directed RNA polymerase 2B [Morus notabilis]
Length = 1093
Score = 46.2 bits (108), Expect(3) = 7e-09
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWE+ A EY++LL M KLAPNL YMK L L W
Sbjct: 185 KIETEAWEKAAAEYRELLMDMCSKKLAPNLPYMKSLFLGW 224
Score = 30.0 bits (66), Expect(3) = 7e-09
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +2
Query: 83 LARGMGQGKYQFLQRRQ 133
+ARGMGQ +Y+FL++RQ
Sbjct: 167 VARGMGQSRYEFLKKRQ 183
Score = 28.5 bits (62), Expect(3) = 7e-09
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KNMSYVCS 339
WFEPL AI E+ELY + K + +CS
Sbjct: 224 WFEPLKKAIEQEQELYREGKKRT-MCS 249
>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 1262
Score = 47.8 bits (112), Expect(3) = 1e-08
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 436 KIETEAWERAADEYRELLMDMCEQKLAPNLPYMKSLFLGW 475
Score = 28.1 bits (61), Expect(3) = 1e-08
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AIT E++L Q KN
Sbjct: 475 WFEPLCNAITKEQDLCRQGKN 495
Score = 27.7 bits (60), Expect(3) = 1e-08
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 89 RGMGQGKYQFLQRRQ 133
RGMG+GKY L+RRQ
Sbjct: 420 RGMGEGKYLMLRRRQ 434
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 47.4 bits (111), Expect(3) = 2e-08
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWE+ A EY++L+ M E KLAPNL YMK L L W
Sbjct: 195 KIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGW 234
Score = 31.6 bits (70), Expect(3) = 2e-08
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2
Query: 68 TRLERLARGMGQGKYQFLQRRQ 133
TR R ARGMGQGKY L+RRQ
Sbjct: 173 TRQNR-ARGMGQGKYHMLKRRQ 193
Score = 24.3 bits (51), Expect(3) = 2e-08
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E++L + KN
Sbjct: 234 WFEPLRNAIDKEQDLCRKGKN 254
>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
gi|550340797|gb|ERP62048.1| hypothetical protein
POPTR_0004s11060g [Populus trichocarpa]
Length = 475
Score = 52.8 bits (125), Expect(3) = 3e-08
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWEQ A EYK+LLK M E KLAPNL YMK L L W
Sbjct: 198 KIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGW 237
Score = 27.3 bits (59), Expect(3) = 3e-08
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 89 RGMGQGKYQFLQRRQ 133
RGMG GKY+ L+RRQ
Sbjct: 182 RGMGSGKYKALRRRQ 196
Score = 22.7 bits (47), Expect(3) = 3e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEE 300
WFEPL AI E+E
Sbjct: 237 WFEPLRDAIAKEQE 250
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 49.7 bits (117), Expect(3) = 4e-08
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWEQ A EY++LL M E KLAPNL YMK L L W
Sbjct: 198 KIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGW 237
Score = 29.6 bits (65), Expect(3) = 4e-08
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 80 RLARGMGQGKYQFLQRRQ 133
R+ARGMG GKY+ L+ RQ
Sbjct: 179 RVARGMGSGKYRMLKMRQ 196
Score = 22.7 bits (47), Expect(3) = 4e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEE 300
WFEPL AI E+E
Sbjct: 237 WFEPLRDAIAKEQE 250
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 49.7 bits (117), Expect(3) = 4e-08
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWEQ A EY++LL M E KLAPNL YMK L L W
Sbjct: 198 KIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGW 237
Score = 29.6 bits (65), Expect(3) = 4e-08
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 80 RLARGMGQGKYQFLQRRQ 133
R+ARGMG GKY+ L+ RQ
Sbjct: 179 RVARGMGSGKYRMLKMRQ 196
Score = 22.7 bits (47), Expect(3) = 4e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEE 300
WFEPL AI E+E
Sbjct: 237 WFEPLRDAIAKEQE 250
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 49.7 bits (117), Expect(3) = 4e-08
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWEQ A EY++LL M E KLAPNL YMK L L W
Sbjct: 198 KIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGW 237
Score = 29.6 bits (65), Expect(3) = 4e-08
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 80 RLARGMGQGKYQFLQRRQ 133
R+ARGMG GKY+ L+ RQ
Sbjct: 179 RVARGMGSGKYRMLKMRQ 196
Score = 22.7 bits (47), Expect(3) = 4e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEE 300
WFEPL AI E+E
Sbjct: 237 WFEPLRDAIAKEQE 250
>ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X1 [Glycine
max]
Length = 1046
Score = 46.6 bits (109), Expect(3) = 9e-08
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI WE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 212 KIETEMWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGW 251
Score = 29.3 bits (64), Expect(3) = 9e-08
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN-MSY 330
WFEPL AI E+E+Y + KN M+Y
Sbjct: 251 WFEPLRDAIVKEQEMYSEGKNRMAY 275
Score = 25.0 bits (53), Expect(3) = 9e-08
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 71 RLERLARGMGQGKYQFLQRRQ 133
R + +G+GQ +YQ L+RRQ
Sbjct: 190 RWKNQGKGVGQSRYQELRRRQ 210
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 48.1 bits (113), Expect(3) = 1e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 194 KIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGW 233
Score = 29.6 bits (65), Expect(3) = 1e-07
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 80 RLARGMGQGKYQFLQRRQ 133
R+ARGMG GKY+ L+ RQ
Sbjct: 175 RVARGMGSGKYRMLKMRQ 192
Score = 22.7 bits (47), Expect(3) = 1e-07
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEE 300
WFEPL AI E+E
Sbjct: 233 WFEPLRDAIAKEQE 246
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B;
Flags: Precursor
Length = 1002
Score = 47.8 bits (112), Expect(3) = 3e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
K+ AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGW 214
Score = 27.3 bits (59), Expect(3) = 3e-07
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 92 GMGQGKYQFLQRRQ 133
GMG GKY FL+RRQ
Sbjct: 160 GMGVGKYNFLRRRQ 173
Score = 23.9 bits (50), Expect(3) = 3e-07
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E++L + KN
Sbjct: 214 WFEPLRDAIAAEQKLCDEGKN 234
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 47.8 bits (112), Expect(3) = 3e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
K+ AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGW 214
Score = 27.3 bits (59), Expect(3) = 3e-07
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 92 GMGQGKYQFLQRRQ 133
GMG GKY FL+RRQ
Sbjct: 160 GMGVGKYNFLRRRQ 173
Score = 23.9 bits (50), Expect(3) = 3e-07
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E++L + KN
Sbjct: 214 WFEPLRDAIAAEQKLCDEGKN 234
>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X1 [Glycine
max]
Length = 1015
Score = 47.0 bits (110), Expect(3) = 3e-07
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI WE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 181 KIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGW 220
Score = 28.1 bits (61), Expect(3) = 3e-07
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E+E+Y + KN
Sbjct: 220 WFEPLRDAIVKEQEMYGEGKN 240
Score = 23.9 bits (50), Expect(3) = 3e-07
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 71 RLERLARGMGQGKYQFLQRRQ 133
R + +G+GQ +YQ L+RRQ
Sbjct: 159 RWQNEGKGVGQCRYQELRRRQ 179
>ref|XP_006585822.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X2 [Glycine
max]
Length = 998
Score = 47.0 bits (110), Expect(3) = 3e-07
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI WE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 181 KIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGW 220
Score = 28.1 bits (61), Expect(3) = 3e-07
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E+E+Y + KN
Sbjct: 220 WFEPLRDAIVKEQEMYGEGKN 240
Score = 23.9 bits (50), Expect(3) = 3e-07
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 71 RLERLARGMGQGKYQFLQRRQ 133
R + +G+GQ +YQ L+RRQ
Sbjct: 159 RWQNEGKGVGQCRYQELRRRQ 179
>ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutrema salsugineum]
gi|557101180|gb|ESQ41543.1| hypothetical protein
EUTSA_v10012544mg [Eutrema salsugineum]
Length = 1030
Score = 48.1 bits (113), Expect(3) = 4e-07
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI WE+ A EY++LL M E KLAPNL Y+K L+LDW
Sbjct: 199 KIETEEWERAANEYRELLTDMCEKKLAPNLPYVKSLLLDW 238
Score = 26.2 bits (56), Expect(3) = 4e-07
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 247 LIGDWFEPLYVAITMEEELY 306
L+ DWFEP+ I ++ELY
Sbjct: 234 LLLDWFEPVRDVIAKDQELY 253
Score = 24.3 bits (51), Expect(3) = 4e-07
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 92 GMGQGKYQFLQRRQ 133
GMG+GKY+ L RRQ
Sbjct: 184 GMGRGKYRNLWRRQ 197
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 48.1 bits (113), Expect(3) = 9e-07
Identities = 25/40 (62%), Positives = 26/40 (65%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
KI AWE A EYK+LL M E KLAPNL YMK L L W
Sbjct: 203 KIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGW 242
Score = 24.6 bits (52), Expect(3) = 9e-07
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 80 RLARGMGQGKYQFLQRRQ 133
++ RGM QG+Y L+RRQ
Sbjct: 184 KMERGMEQGRYLRLRRRQ 201
Score = 24.6 bits (52), Expect(3) = 9e-07
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E+EL KN
Sbjct: 242 WFEPLRDAIVKEQELCRLGKN 262
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 47.0 bits (110), Expect(3) = 1e-06
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
K+ AWEQ A EY+++L+ M E KLAPNL Y+K L L W
Sbjct: 151 KMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGW 190
Score = 25.8 bits (55), Expect(3) = 1e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 77 ERLARGMGQGKYQFLQRRQ 133
+++ GMG GKY L+RRQ
Sbjct: 131 KKMVAGMGIGKYAILKRRQ 149
Score = 24.3 bits (51), Expect(3) = 1e-06
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 259 WFEPLYVAITMEEEL 303
WFEPL AI E+EL
Sbjct: 190 WFEPLRDAIVAEQEL 204
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 47.8 bits (112), Expect(3) = 1e-06
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
K+ AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGW 214
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 92 GMGQGKYQFLQRRQ 133
GMG GKY L+RRQ
Sbjct: 160 GMGVGKYNLLRRRQ 173
Score = 23.9 bits (50), Expect(3) = 1e-06
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E++L + KN
Sbjct: 214 WFEPLRDAIAAEQKLCDEGKN 234
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 47.8 bits (112), Expect(3) = 1e-06
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
K+ AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGW 214
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 92 GMGQGKYQFLQRRQ 133
GMG GKY L+RRQ
Sbjct: 160 GMGVGKYNLLRRRQ 173
Score = 23.9 bits (50), Expect(3) = 1e-06
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E++L + KN
Sbjct: 214 WFEPLRDAIAAEQKLCDEGKN 234
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1;
Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 47.8 bits (112), Expect(3) = 1e-06
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 KIFKRAWEQVAYEYKDLLKGM*E*KLAPNLSYMKYLVLDW 254
K+ AWE+ A EY++LL M E KLAPNL YMK L L W
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGW 214
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 92 GMGQGKYQFLQRRQ 133
GMG GKY L+RRQ
Sbjct: 160 GMGVGKYNLLRRRQ 173
Score = 23.9 bits (50), Expect(3) = 1e-06
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 259 WFEPLYVAITMEEELYLQ*KN 321
WFEPL AI E++L + KN
Sbjct: 214 WFEPLRDAIAAEQKLCDEGKN 234