BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00026799
         (566 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]                 296   2e-78
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   280   2e-73
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   228   1e-57
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t...   222   5e-56
gb|AAF67366.1| Hypothetical protein T32B20.i [Arabidopsis thaliana]   214   1e-53
pir||E84492 probable retroelement pol polyprotein [imported] - A...   209   3e-52
gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsi...   209   3e-52
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   196   3e-48
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   196   3e-48
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        196   5e-48
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   192   7e-47
emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]         192   7e-47
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   191   1e-46
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   191   1e-46
gb|AAP12935.1| retrotransposon protein, putative, unclassified [...   191   1e-46
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ...   187   2e-45
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   186   4e-45
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja...   186   4e-45
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]     185   6e-45
ref|NP_001173583.1| Os03g0680566 [Oryza sativa Japonica Group] g...   184   1e-44

>gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
          Length = 551

 Score =  296 bits (759), Expect = 2e-78
 Identities = 137/188 (72%), Positives = 165/188 (87%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E IKGKVKFGDGSC+DIGGKGSILFQ KT EQ+LV DIYYIP+LKSNILSLGQATE GCD
Sbjct: 354 ENIKGKVKFGDGSCVDIGGKGSILFQGKTGEQQLVIDIYYIPDLKSNILSLGQATEFGCD 413

Query: 183 VRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVS 362
           VR++ DYLT+HDP GRLLVKV RSPNRLYK++L+IGKP+CLH  +E +TWRWHARLGH++
Sbjct: 414 VRIRHDYLTLHDPHGRLLVKVIRSPNRLYKINLKIGKPICLHTKIEGDTWRWHARLGHIN 473

Query: 363 FKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCG 542
           FKT++ MS+QEMV GLP+I+ E ++CE  LVGKQ R +FPK   +RA++ LELL+ADLCG
Sbjct: 474 FKTIKDMSKQEMVYGLPEIEEEKQVCEPCLVGKQTRQAFPKTTLYRASRVLELLYADLCG 533

Query: 543 PISPPTIA 566
           PISPP++A
Sbjct: 534 PISPPSLA 541


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  280 bits (716), Expect = 2e-73
 Identities = 131/188 (69%), Positives = 159/188 (84%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E IKG+VKFGDGSC+ I GKGSI+F++KT EQKL+ +IYYIPEL+SNILSLGQATE GCD
Sbjct: 223 ESIKGRVKFGDGSCVKINGKGSIIFEAKTGEQKLLTNIYYIPELRSNILSLGQATEQGCD 282

Query: 183 VRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVS 362
           VRMK +YLT+ DPSGRLLVKV RSPNRLYKVSL++GKP CL   + +E WRWHARLGH++
Sbjct: 283 VRMKDNYLTLRDPSGRLLVKVLRSPNRLYKVSLKVGKPSCLLTKINEEPWRWHARLGHIN 342

Query: 363 FKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCG 542
           FKT++ M++ EMV+GLP+I  E ++CES LVGKQ R SFP A   R+++ LELLHADLCG
Sbjct: 343 FKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVLELLHADLCG 402

Query: 543 PISPPTIA 566
           PISP T+A
Sbjct: 403 PISPSTLA 410


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  228 bits (580), Expect = 1e-57
 Identities = 109/188 (57%), Positives = 139/188 (73%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + GKVKFGD S IDI GKGSILF +K  E K + ++YYIP+LKSNI+SLGQATEAGCD
Sbjct: 279 EMVTGKVKFGDDSRIDIRGKGSILFLTKNGEPKTLANVYYIPDLKSNIISLGQATEAGCD 338

Query: 183 VRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVS 362
           VR+K +YLT+HD  G LLVK TRS NRLY+V L++    CL     ++  +WHARLGH++
Sbjct: 339 VRLKDNYLTLHDRDGNLLVKATRSRNRLYRVELKVKNTKCLQLAALNDLTKWHARLGHIN 398

Query: 363 FKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCG 542
            +T+++M  +E V G+P    E  IC S ++GKQ R  FPKA T+RA++ LEL+H DLCG
Sbjct: 399 LETIKAMVTKEFVIGIPSAPKEKEICASCMLGKQARQVFPKATTYRASQILELIHGDLCG 458

Query: 543 PISPPTIA 566
           PISPPT A
Sbjct: 459 PISPPTAA 466


>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1250

 Score =  222 bits (566), Expect = 5e-56
 Identities = 102/183 (55%), Positives = 144/183 (78%)
 Frame = +3

Query: 18  KVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQ 197
           KV+FGD S IDI GKGS+LF SK +E+K++ D+Y+IP+LKSNI+SLGQATE+GC+VRMK 
Sbjct: 265 KVRFGDDSRIDIKGKGSVLFISKNKEKKILADVYFIPDLKSNIISLGQATESGCEVRMKD 324

Query: 198 DYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMR 377
           D L +HD  G+LLVK  RS NRLYKV + I  P CL A++   + +WH+RLGH+  +T++
Sbjct: 325 DLLIMHDKDGKLLVKANRSKNRLYKVLMEIEPPKCLQAMVLSNSAKWHSRLGHIGVETLK 384

Query: 378 SMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGPISPP 557
           +M ++++V G+P+++ +   C S L+GKQV  SFP+A+++RAT+ LEL+H DLCGPI+PP
Sbjct: 385 TMVKKDLVIGMPQMEVDKETCASCLLGKQVSKSFPQASSYRATQNLELIHGDLCGPITPP 444

Query: 558 TIA 566
           T A
Sbjct: 445 TSA 447


>gb|AAF67366.1| Hypothetical protein T32B20.i [Arabidopsis thaliana]
          Length = 724

 Score =  214 bits (546), Expect = 1e-53
 Identities = 100/186 (53%), Positives = 137/186 (73%)
 Frame = +3

Query: 9   IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
           + GKV+FGD S IDI GKGSI F SK  + KL+ D+YYIP+L+SNI+SLGQATEAGCDVR
Sbjct: 199 VTGKVRFGDDSRIDIKGKGSIPFVSKNGDSKLLEDVYYIPDLRSNIISLGQATEAGCDVR 258

Query: 189 MKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFK 368
           M++ YLT+ D  G LL+   R+ NRLYKV+L + +  CL   +  ++  WH R+GH+ F 
Sbjct: 259 MRKGYLTLFDREGELLIWANRARNRLYKVTLEVKQNKCLQLSMSSDSMNWHDRMGHIGFD 318

Query: 369 TMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGPI 548
            M+++  +E+V  +PK+  E + C S L+GKQVR SFP++ ++RA+ PLEL+H DLCGPI
Sbjct: 319 NMKTVINKELVIRIPKLIVEKQTCTSCLLGKQVRQSFPQSTSYRASNPLELVHGDLCGPI 378

Query: 549 SPPTIA 566
           +PPT A
Sbjct: 379 TPPTTA 384


>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
           thaliana
          Length = 531

 Score =  209 bits (533), Expect = 3e-52
 Identities = 99/184 (53%), Positives = 133/184 (72%)
 Frame = +3

Query: 9   IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
           I GK++FGD S IDI GKG+I F     + +++ D+Y+IPELKSNI+SLGQATE+GC+++
Sbjct: 196 ITGKIRFGDDSRIDIKGKGTIAFIDLNGKPRVMLDVYFIPELKSNIISLGQATESGCEIK 255

Query: 189 MKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFK 368
           +K  YLT+HD  G+LLVK  RS N LYKV + + K  CL+      +  WHAR+GHVS  
Sbjct: 256 LKDGYLTMHDQEGKLLVKAERSRNSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLI 315

Query: 369 TMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGPI 548
           T++SM  +E++QG P +  E+ +C S L+GKQ R SFP+A  FRATK LEL+H DLCGPI
Sbjct: 316 TLKSMIDKELIQGAPSLVIESEVCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPI 375

Query: 549 SPPT 560
           +P T
Sbjct: 376 TPKT 379


>gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 767

 Score =  209 bits (533), Expect = 3e-52
 Identities = 99/184 (53%), Positives = 133/184 (72%)
 Frame = +3

Query: 9   IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
           I GK++FGD S IDI GKG+I F     + +++ D+Y+IPELKSNI+SLGQATE+GC+++
Sbjct: 93  ITGKIRFGDDSRIDIKGKGTIAFIDLNGKPRVMLDVYFIPELKSNIISLGQATESGCEIK 152

Query: 189 MKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFK 368
           +K  YLT+HD  G+LLVK  RS N LYKV + + K  CL+      +  WHAR+GHVS  
Sbjct: 153 LKDGYLTMHDQEGKLLVKAERSRNSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLI 212

Query: 369 TMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGPI 548
           T++SM  +E++QG P +  E+ +C S L+GKQ R SFP+A  FRATK LEL+H DLCGPI
Sbjct: 213 TLKSMIDKELIQGAPSLVIESEVCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPI 272

Query: 549 SPPT 560
           +P T
Sbjct: 273 TPKT 276


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  196 bits (499), Expect = 3e-48
 Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
 Frame = +3

Query: 9   IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
           I G VKFGD S + I GKGSILF  K  +Q L+ D++YIP L  N++SLGQ TE G  V 
Sbjct: 385 ITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVV 444

Query: 189 MKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSF 365
           M +D L V D S  RL+++V R+PNRLY++ L++  P+CL   +++  W WHARLGHV+F
Sbjct: 445 MDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNF 504

Query: 366 KTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGP 545
           + M+ ++ + M  G+P I   N++C++ LV KQ+R  FP  A FRA +PLELLH DLCGP
Sbjct: 505 QAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGP 564

Query: 546 ISPPTIA 566
           I+P T+A
Sbjct: 565 ITPTTMA 571


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  196 bits (499), Expect = 3e-48
 Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
 Frame = +3

Query: 9   IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
           I G VKFGD S + I GKGSILF  K  +Q L+ D++YIP L  N++SLGQ TE G  V 
Sbjct: 385 ITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVV 444

Query: 189 MKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSF 365
           M +D L V D S  RL+++V R+PNRLY++ L++  P+CL   +++  W WHARLGHV+F
Sbjct: 445 MDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNF 504

Query: 366 KTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGP 545
           + M+ ++ + M  G+P I   N++C++ LV KQ+R  FP  A FRA +PLELLH DLCGP
Sbjct: 505 QAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGP 564

Query: 546 ISPPTIA 566
           I+P T+A
Sbjct: 565 ITPTTMA 571


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  196 bits (497), Expect = 5e-48
 Identities = 97/189 (51%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + G+V+FGD S + I G+GSILF  K  +Q L+ D+YYIP L  N++SLGQ TE G  
Sbjct: 196 ETVTGQVRFGDASSVQIMGQGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHR 255

Query: 183 VRMKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHV 359
           V M  D L V D +  RL++KV R+ NRLY++ L++  P+CL A L+D  W WHARLGHV
Sbjct: 256 VVMDGDDLEVFDKNPWRLVMKVRRTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHV 315

Query: 360 SFKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLC 539
           +F  ++ +  +EMV G+P +   N++C++ LV KQVR SFP  A +RA  PLELLH DLC
Sbjct: 316 NFHALKLLVDKEMVAGVPAVHHPNQLCQACLVAKQVRQSFPGMANYRAEAPLELLHMDLC 375

Query: 540 GPISPPTIA 566
           GPI+P T A
Sbjct: 376 GPITPSTFA 384


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  192 bits (487), Expect = 7e-47
 Identities = 85/186 (45%), Positives = 130/186 (69%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           +K+KG V FGD S + I GKG+IL   K    KL+ D+YY+P+LKSNILSLGQ  E G +
Sbjct: 48  KKVKGNVSFGDSSKVQIQGKGTILISLKDGAHKLITDVYYVPKLKSNILSLGQLVEKGYE 107

Query: 183 VRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVS 362
           + MK   L + D +  L+ KV  S NR++ ++++  +  CL A ++DE+W WH R GH++
Sbjct: 108 IHMKDCCLWLRDKNSNLIAKVFMSRNRMFTLNIKTNEAKCLKASIKDESWCWHMRFGHLN 167

Query: 363 FKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCG 542
           F  ++S+ +++MV+G+P+I   N++CE+ L+GK  R SFPK A  RA +PL+L++ D+CG
Sbjct: 168 FGALKSLGEEKMVKGMPQINHPNQLCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCG 227

Query: 543 PISPPT 560
           PI+PP+
Sbjct: 228 PINPPS 233


>emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]
          Length = 1403

 Score =  192 bits (487), Expect = 7e-47
 Identities = 84/184 (45%), Positives = 127/184 (69%)
 Frame = +3

Query: 9   IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
           ++G V+FGDGS + I G+G I+F+ + +E + +  +YYIP+L +N++SLGQ  E GCDVR
Sbjct: 417 VRGSVRFGDGSVVGIEGRGKIIFECRNQEHRALTGVYYIPKLNANLISLGQLDENGCDVR 476

Query: 189 MKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFK 368
           +     T+ DP+ +LL +V R+ NRLY + L IG+P+CL A  ++  W WHAR GH+ F 
Sbjct: 477 IYHGVCTIRDPAAQLLARVQRTRNRLYLIKLTIGQPVCLAAKAQECAWLWHARYGHLHFD 536

Query: 369 TMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGPI 548
            +R ++ ++MV+G+P I    ++C+S ++ KQ R  FP+ + FRA   LEL+H DLCGPI
Sbjct: 537 ALRRLASRDMVRGMPDIDHVEQLCDSCVISKQRRTPFPRRSMFRAEDRLELVHGDLCGPI 596

Query: 549 SPPT 560
           SP T
Sbjct: 597 SPAT 600


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  191 bits (485), Expect = 1e-46
 Identities = 95/187 (50%), Positives = 126/187 (67%), Gaps = 1/187 (0%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + G+V+FGD S + I GKGSILF  K  +Q L+ D+YYIP L  N++SLGQ TE G  
Sbjct: 336 ETVTGQVRFGDASSVQIMGKGSILFSCKNGDQWLLDDVYYIPSLYCNMVSLGQLTETGHR 395

Query: 183 VRMKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHV 359
           V M  D L V D +  RL++KV RS NRLY++ L++  P+CL A L+D  W WHARLGHV
Sbjct: 396 VVMDGDDLEVFDKNPWRLVMKVRRSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHV 455

Query: 360 SFKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLC 539
           +F  ++ +  +EM  G+P +   N++C++ LV KQVR  FP  A + A  PLELLH DLC
Sbjct: 456 NFHALKLLVDKEMAAGVPAVHHPNQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLC 515

Query: 540 GPISPPT 560
           GPI+P T
Sbjct: 516 GPITPST 522


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + G V+FGD S + I GKG ILF  K  +Q L+ D+YYIP L  N++SLGQ TE G  
Sbjct: 376 ETVTGVVRFGDASSVQIMGKGLILFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHR 435

Query: 183 VRMKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHV 359
           V M  D L V D +  RL++KV R+ NRLY++ L++  P+CL   L D  W WHARLGHV
Sbjct: 436 VVMDNDDLEVFDKNPWRLVIKVRRTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHV 495

Query: 360 SFKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLC 539
           +F+T++ +  +EM  G+P++   N++C++ L+ KQ+R  FP  A +RA  PLELLH DLC
Sbjct: 496 NFQTLKLLVDKEMAAGVPQVHHPNQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLC 555

Query: 540 GPISPPTIA 566
           GPI+P T A
Sbjct: 556 GPITPSTFA 564


>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1283

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + G V+FGD S + I GKG ILF  K  +Q L+ D+YYIP L  N++SLGQ TE G  
Sbjct: 376 ETVTGVVRFGDASSVQIMGKGLILFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHR 435

Query: 183 VRMKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHV 359
           V M  D L V D +  RL++KV R+ NRLY++ L++  P+CL   L D  W WHARLGHV
Sbjct: 436 VVMDNDDLEVFDKNPWRLVIKVRRTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHV 495

Query: 360 SFKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLC 539
           +F+T++ +  +EM  G+P++   N++C++ L+ KQ+R  FP  A +RA  PLELLH DLC
Sbjct: 496 NFQTLKLLVDKEMAAGVPQVHHPNQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLC 555

Query: 540 GPISPPTIA 566
           GPI+P T A
Sbjct: 556 GPITPSTFA 564


>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1150

 Score =  187 bits (474), Expect = 2e-45
 Identities = 98/188 (52%), Positives = 125/188 (66%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           + + GKV F D S IDI G G         +Q+ V ++Y+I +LKSNI+SLGQATE+GC+
Sbjct: 207 DSVSGKVHFRDDSRIDIKGNG---------DQQKVSNVYFILDLKSNIISLGQATESGCN 257

Query: 183 VRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVS 362
           + MK D LT+HD  G+LLVK  RS N LYKV + I     LH     E+ RWHARLGHV+
Sbjct: 258 ITMKGDQLTMHDRDGKLLVKACRSKNHLYKVRMGIKGATRLHLTTISESSRWHARLGHVN 317

Query: 363 FKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCG 542
           F T++SM Q+E+VQG      +  +C S L+GKQ R +FPKA  FRA K LEL+H DLCG
Sbjct: 318 FDTIKSMMQKELVQGFSLGSIKKELCSSCLLGKQTRLAFPKATLFRAAKILELVHGDLCG 377

Query: 543 PISPPTIA 566
           PI+P T A
Sbjct: 378 PITPSTAA 385


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1172

 Score =  186 bits (472), Expect = 4e-45
 Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + G+V+FGD S + I G GSILF  K  +Q L+ D+YYIP L  N++SLGQ TE G  
Sbjct: 230 ETMTGQVRFGDASSVQIMGMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHR 289

Query: 183 VRMKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHV 359
           V M  D L V D +  RL++KV R+ NRLY++ L++   +CL A L++  W WHAR+GHV
Sbjct: 290 VMMDGDDLKVFDKNPWRLVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHV 349

Query: 360 SFKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLC 539
           +F  ++ +  +EM  G+P +   N++C++ LV KQVR  FP  A +RA  PLELLH DLC
Sbjct: 350 NFHALKLLVDKEMASGVPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLC 409

Query: 540 GPISPPTIA 566
           GPI+P T A
Sbjct: 410 GPITPSTFA 418


>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1217

 Score =  186 bits (472), Expect = 4e-45
 Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           E + G+V+FGD S + I G GSILF  K  +Q L+ D+YYIP L  N++SLGQ TE G  
Sbjct: 374 ETMTGQVRFGDASSVQIMGMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHR 433

Query: 183 VRMKQDYLTVHDPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHV 359
           V M  D L V D +  RL++KV R+ NRLY++ L++   +CL A L++  W WHAR+GHV
Sbjct: 434 VMMDGDDLKVFDKNPWRLVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHV 493

Query: 360 SFKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLC 539
           +F  ++ +  +EM  G+P +   N++C++ LV KQVR  FP  A +RA  PLELLH DLC
Sbjct: 494 NFHALKLLVDKEMASGVPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLC 553

Query: 540 GPISPPTIA 566
           GPI+P T A
Sbjct: 554 GPITPSTFA 562


>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1332

 Score =  185 bits (470), Expect = 6e-45
 Identities = 85/186 (45%), Positives = 124/186 (66%)
 Frame = +3

Query: 3   EKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCD 182
           + ++G V+FGDGS IDI G G +  +      ++V  +YYIP+LKSN++SLGQ  E GC 
Sbjct: 368 DTVRGVVRFGDGSVIDICGFGDVTLECYNGAHRIVSGVYYIPKLKSNLISLGQLDENGCA 427

Query: 183 VRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVS 362
           + +    +T+ D +  L+ KVTR+  R Y + L++ +P+CL A  E+  W WHAR GH++
Sbjct: 428 IHIDDGVMTIRDRARALVAKVTRTEGRSYLLDLKVAQPVCLVASCEEVPWLWHARYGHLN 487

Query: 363 FKTMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCG 542
           F ++R ++Q  MV+GLP I+  +RIC+   + KQ R  FP  A +RAT+PLEL+H DLCG
Sbjct: 488 FDSLRRLAQGAMVRGLPDIEQVDRICDCCQIAKQRRAPFPSEAKYRATEPLELVHGDLCG 547

Query: 543 PISPPT 560
           PISP T
Sbjct: 548 PISPAT 553


>ref|NP_001173583.1| Os03g0680566 [Oryza sativa Japonica Group]
            gi|255674783|dbj|BAH92311.1| Os03g0680566 [Oryza sativa
            Japonica Group]
          Length = 1836

 Score =  184 bits (468), Expect = 1e-44
 Identities = 85/184 (46%), Positives = 127/184 (69%)
 Frame = +3

Query: 9    IKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVR 188
            ++G VKFGD S + I G GSILF +KT E +L+  +YYIP L+++I+SLGQ  E G  V 
Sbjct: 780  VQGSVKFGDASTVVIKGVGSILFTAKTGEHRLLTGVYYIPALRNSIISLGQLDENGSRVE 839

Query: 189  MKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFK 368
            ++   L V D   RLLVKV R  NRLY + +++ +P+CL A  +D+ WRWH R GH++F 
Sbjct: 840  IEDGVLRVWDRHRRLLVKVNRGANRLYVLHVQVAQPVCLAARRDDDAWRWHERFGHLNFG 899

Query: 369  TMRSMSQQEMVQGLPKIKGENRICESYLVGKQVRGSFPKAATFRATKPLELLHADLCGPI 548
             ++ +  +EMVQG+P+++   + C++ ++ KQ R  FP+ A+FRA + LEL+H DLCGP+
Sbjct: 900  ALKQLGNKEMVQGMPRVEHVEQFCDTCVLTKQRRLPFPRQASFRAEEKLELVHGDLCGPV 959

Query: 549  SPPT 560
            +P T
Sbjct: 960  TPAT 963