BLASTX nr result
ID: Paeonia23_contig00026551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00026551
(392 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT85792.1| reverse transcriptase (RNA-dependent DNA polymera... 76 1e-26
gb|AFQ94056.1| reverse transcriptase, partial [Paeonia suffrutic... 110 2e-22
gb|AFQ94055.1| reverse transcriptase, partial [Paeonia suffrutic... 100 2e-19
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 86 7e-15
ref|XP_007022687.1| Retrotransposon protein, Ty3-gypsy sub-class... 83 3e-14
ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [The... 83 3e-14
gb|AAS90688.2| putative polyprotein [Oryza sativa Japonica Group] 83 3e-14
ref|XP_007032152.1| Retrotransposon protein, putative [Theobroma... 82 6e-14
gb|ABD43143.1| reverse transcriptase [Orobanche ramosa] 82 6e-14
gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 6e-14
gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 6e-14
emb|CAE04032.2| OSJNBb0068N06.8 [Oryza sativa Japonica Group] 82 6e-14
ref|XP_007037156.1| DNA/RNA polymerases superfamily protein [The... 82 8e-14
gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 8e-14
gb|ACU42183.1| reverse transcriptase [Prunus mume] gi|255928612|... 82 8e-14
gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group] 82 8e-14
gb|AAT73694.1| putative polyprotein [Oryza sativa Japonica Group] 82 8e-14
emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group] 82 8e-14
gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Ja... 82 8e-14
ref|XP_007044234.1| Retrotransposon protein [Theobroma cacao] gi... 82 1e-13
>gb|AAT85792.1| reverse transcriptase (RNA-dependent DNA polymerase) family protein
[Oryza sativa Japonica Group] gi|108709088|gb|ABF96883.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1708
Score = 76.3 bits (186), Expect(2) = 1e-26
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG 168
LP IDDLFDQL+ ATIFS ID RS YHQ+ ++EE I +TAF RY +EF VM FG
Sbjct: 919 LPRIDDLFDQLKGATIFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFG 974
Score = 69.3 bits (168), Expect(2) = 1e-26
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +3
Query: 168 VTNAPSTFMDMMNRVFNRYLDKFVVVSIDDVLVYSPTCEDHARHLTIVL 314
+TNAP+ FM++MN+VF YLDKFVVV IDD+LVYS + EDH HL +VL
Sbjct: 975 LTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLCLVL 1023
>gb|AFQ94056.1| reverse transcriptase, partial [Paeonia suffruticosa]
Length = 143
Score = 110 bits (276), Expect = 2e-22
Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 8/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQLR AT+FSSIDF++AYHQVAVKEEHIERTAF RY HFEFPVM FG +
Sbjct: 20 LPRIDDLFDQLRGATVFSSIDFKTAYHQVAVKEEHIERTAFHTRYGHFEFPVMPFGVTNA 79
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPPVR-------TMLVT*P*YSTLREHKL 336
P + + + ++ + +L+ ++ + M++ TLRE +L
Sbjct: 80 PATFMDL--MNRVFNQYLDKFVVVLIDDVLVYSKTKEEHARHLAMIL-----QTLREQQL 132
Query: 337 YTKLEKCEFWR 369
Y KLEKCEFW+
Sbjct: 133 YAKLEKCEFWK 143
>gb|AFQ94055.1| reverse transcriptase, partial [Paeonia suffruticosa]
Length = 148
Score = 100 bits (249), Expect = 2e-19
Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFD L+ AT+FSSIDF++AYHQVAVKEEHIER AFR RY HFEF VM FG +
Sbjct: 20 LPRIDDLFDHLQGATMFSSIDFKTAYHQVAVKEEHIERIAFRTRYGHFEFLVMPFGVTNA 79
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCI------------HPPVRTMLVT*P*YSTL 321
P + + + ++ + + ++ I H M++ TL
Sbjct: 80 PATFMDL--MNRVFNKYLDKFVVVFIVVVFIDDVLVYSKTKEEHVKHLAMIL-----QTL 132
Query: 322 REHKLYTKLEKCEFWR 369
RE +LY KLEKCEFW+
Sbjct: 133 REQQLYVKLEKCEFWK 148
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 85.5 bits (210), Expect = 7e-15
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ +K+E + +TAFR+RY H++F VM FG +
Sbjct: 63 LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNA 122
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + + ++ + + + I+ +R +L TLR++K
Sbjct: 123 PAVFMDL--MNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL------QTLRDNK 174
Query: 334 LYTKLEKCEFW 366
LY K KCEFW
Sbjct: 175 LYAKFSKCEFW 185
>ref|XP_007022687.1| Retrotransposon protein, Ty3-gypsy sub-class, putative [Theobroma
cacao] gi|508722315|gb|EOY14212.1| Retrotransposon
protein, Ty3-gypsy sub-class, putative [Theobroma cacao]
Length = 284
Score = 83.2 bits (204), Expect = 3e-14
Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG---S 171
LP IDDLFDQL+ AT+FS +D RS YHQ+ +KE+ + +TAFR RY H+EF VM FG +
Sbjct: 9 LPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRTRYGHYEFLVMPFGLTNA 68
Query: 172 RTPLLRLWI**IGCSTGTWISLWWCLLMMCWCIH--------PPVRTMLVT*P*YSTLRE 327
T + L + ++ + + + ++ +R +L TLRE
Sbjct: 69 PTAFMDL----MNRVFHPYLDKFVIVFIDDILVYSRDNDEHAAHLRIVL------QTLRE 118
Query: 328 HKLYTKLEKCEFW 366
+LY K KCEFW
Sbjct: 119 RQLYAKFSKCEFW 131
>ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508708185|gb|EOY00082.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1515
Score = 83.2 bits (204), Expect = 3e-14
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS +D RS YHQ+ +KE+ + +TAFR RY H+EF VM FG +
Sbjct: 647 LPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRTRYGHYEFLVMPFGLTNA 706
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIH--------PPVRTMLVT*P*YSTLREHK 333
P + + + ++ + + + ++ +R +L TLRE +
Sbjct: 707 PAAFMDL--MNRVFHPYLDKFVIVFIDDILVYSRDNDEHAAHLRIVL------QTLRERQ 758
Query: 334 LYTKLEKCEFW 366
LY K KCEFW
Sbjct: 759 LYAKFSKCEFW 769
>gb|AAS90688.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1789
Score = 83.2 bits (204), Expect = 3e-14
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY FEF VM FG +
Sbjct: 922 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFEFTVMSFGLTNA 981
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 982 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLRLVL------GKLREHQ 1033
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 1034 LYAKLSKCEFW 1044
>ref|XP_007032152.1| Retrotransposon protein, putative [Theobroma cacao]
gi|508711181|gb|EOY03078.1| Retrotransposon protein,
putative [Theobroma cacao]
Length = 1263
Score = 82.4 bits (202), Expect = 6e-14
Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+RA FS ID RS YHQ+ ++ E I +TAFR RY H+EF VM FG +
Sbjct: 425 LPRIDDLFDQLQRAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNA 484
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPPVR------TMLVT*P*YSTLREHKLY 339
P + + + ++ + + + I+ R +V L+EH+LY
Sbjct: 485 PAAFMDL--MNRVFKPYLDKFMVVFIDDILIYSKSRKEHEQHLKIV----LQILKEHQLY 538
Query: 340 TKLEKCEFW 366
K KCEFW
Sbjct: 539 AKFSKCEFW 547
>gb|ABD43143.1| reverse transcriptase [Orobanche ramosa]
Length = 143
Score = 82.4 bits (202), Expect = 6e-14
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ A++FS ID RS YHQ+ +KEE + +TAF RY HFEF VM FG +
Sbjct: 20 LPRIDDLFDQLQGASVFSKIDLRSGYHQLKIKEEDVPKTAFSTRYGHFEFRVMPFGLTNA 79
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPPVRT--MLVT*P*YSTLREHKLYTKLE 351
P + + + ++ + + + I+ + L L+E KLY K +
Sbjct: 80 PAAFMDL--MNRVFKDFLDKFVIVFIDDILIYSKTKEDHALHLRKVLEVLKEKKLYAKFK 137
Query: 352 KCEFW 366
KCEFW
Sbjct: 138 KCEFW 142
>gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 82.4 bits (202), Expect = 6e-14
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 936 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 995
Query: 178 P------LLRLWI**IGCSTGTWISLWWCLLMMCWCIHPPVRTMLVT*P*YSTLREHKLY 339
P + ++++ + +I +L+ R + + LREH+LY
Sbjct: 996 PAFFMNLMNKVFMEYLDKFVVVFID---DILIYSQSEEDHQRHLRLV---LGKLREHQLY 1049
Query: 340 TKLEKCEFW 366
KL KCEFW
Sbjct: 1050 AKLSKCEFW 1058
>gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1748
Score = 82.4 bits (202), Expect = 6e-14
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ ATIFS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 881 LPRIDDLFDQLKGATIFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 940
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 941 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLRLVL------GKLREHQ 992
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 993 LYAKLSKCEFW 1003
>emb|CAE04032.2| OSJNBb0068N06.8 [Oryza sativa Japonica Group]
Length = 947
Score = 82.4 bits (202), Expect = 6e-14
Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF +Y +EF VMLFG +
Sbjct: 474 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTQYGLYEFTVMLFGLTNA 533
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + ++ +R +L LREH+
Sbjct: 534 PAFFMNL--MNKVFMEYLDKFVVVFIDDILVYSQSEEDHQQHLRLVL------GKLREHQ 585
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 586 LYAKLSKCEFW 596
>ref|XP_007037156.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508774401|gb|EOY21657.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1188
Score = 82.0 bits (201), Expect = 8e-14
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQLR A +FS ID RS Y+Q+ +KE+ + +TAFR RY H+EF VM FG +
Sbjct: 638 LPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVHKTAFRTRYGHYEFLVMPFGLTNA 697
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + + ++ + + + ++ +R +L TLRE +
Sbjct: 698 PTVFMDL--MNRVFHPYLDKFVIVFIDDILVYSKNDDEHAAHLRIVL------QTLRERQ 749
Query: 334 LYTKLEKCEFW 366
LY K KCEFW
Sbjct: 750 LYVKFSKCEFW 760
>gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 82.0 bits (201), Expect = 8e-14
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 954 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 1013
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 1014 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLRLVL------EKLREHQ 1065
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 1066 LYAKLSKCEFW 1076
>gb|ACU42183.1| reverse transcriptase [Prunus mume] gi|255928612|gb|ACU42194.1|
reverse transcriptase [Prunus mume]
Length = 143
Score = 82.0 bits (201), Expect = 8e-14
Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFGSRTP 180
LP IDDLFDQLR + FS ID RS YHQ+ VK E I +TAFR RY H+EF VM FG T
Sbjct: 20 LPRIDDLFDQLRGSHFFSKIDLRSGYHQLRVKAEDIPKTAFRTRYGHYEFVVMPFG-LTN 78
Query: 181 LLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHKL 336
++ + ++ + + + I+ +R +L TLRE++L
Sbjct: 79 APAEFMDMMNRIFRPYLDQFVIIFIDDILIYSKSQEEHEEHLRIVL------QTLRENQL 132
Query: 337 YTKLEKCEFW 366
Y KL KCEFW
Sbjct: 133 YAKLSKCEFW 142
>gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1498
Score = 82.0 bits (201), Expect = 8e-14
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 631 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 690
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 691 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQTEEDHQHHLRLVL------GKLREHQ 742
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 743 LYAKLSKCEFW 753
>gb|AAT73694.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1778
Score = 82.0 bits (201), Expect = 8e-14
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 911 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 970
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 971 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQTEEDHQHHLRLVL------GKLREHQ 1022
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 1023 LYAKLSKCEFW 1033
>emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]
Length = 1092
Score = 82.0 bits (201), Expect = 8e-14
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 297 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 356
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 357 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQSEEDHQQHLRLVL------GKLREHQ 408
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 409 LYAKLSKCEFW 419
>gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1862
Score = 82.0 bits (201), Expect = 8e-14
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQL+ AT+FS ID RS YHQ+ ++EE I +TAF RY +EF VM FG +
Sbjct: 995 LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNA 1054
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + ++ + + + I+ +R +L LREH+
Sbjct: 1055 PAFFMNL--MNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLRLVL------EKLREHQ 1106
Query: 334 LYTKLEKCEFW 366
LY KL KCEFW
Sbjct: 1107 LYAKLSKCEFW 1117
>ref|XP_007044234.1| Retrotransposon protein [Theobroma cacao]
gi|508708169|gb|EOY00066.1| Retrotransposon protein
[Theobroma cacao]
Length = 381
Score = 81.6 bits (200), Expect = 1e-13
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Frame = +1
Query: 1 LPHIDDLFDQLRRATIFSSIDFRSAYHQVAVKEEHIERTAFRARYRHFEFPVMLFG-SRT 177
LP IDDLFDQLR A +FS ID RS Y+Q+ +KE+ + +TAFR RY H+EF VM FG +
Sbjct: 153 LPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVPKTAFRTRYGHYEFLVMPFGLTNA 212
Query: 178 PLLRLWI**IGCSTGTWISLWWCLLMMCWCIHPP--------VRTMLVT*P*YSTLREHK 333
P + + + + ++ + + + ++ +R +L TLRE +
Sbjct: 213 PAVFMDL--MNRVFHPYLDKFVIVFIDDILVYSKNDDEHAAHLRIVL------QTLRERQ 264
Query: 334 LYTKLEKCEFW 366
LY K KCEFW
Sbjct: 265 LYAKFSKCEFW 275