BLASTX nr result

ID: Paeonia23_contig00025662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00025662
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup9...    57   2e-06
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9...    56   4e-06
ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup9...    56   4e-06

>ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Fragaria
            vesca subsp. vesca]
          Length = 1089

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +2

Query: 242  KHIKIWRLTSFMEDHKLVIEDWDLGARICISLYVTRSSL 358
            KH  IWRL + MEDHK  IE+WDLGA I IS Y+TRSSL
Sbjct: 944  KHSDIWRLATSMEDHKSEIENWDLGAGIYISFYLTRSSL 982


>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
            tuberosum]
          Length = 1033

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = +2

Query: 242  KHIKIWRLTSFMEDHKLVIEDWDLGARICISLYVTRSSL 358
            +H +IWRL + MEDHK  IEDWDLGA I IS Y+ RSSL
Sbjct: 889  EHSEIWRLAASMEDHKSEIEDWDLGAGIYISFYLLRSSL 927


>ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
           lycopersicum]
          Length = 1012

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = +2

Query: 242 KHIKIWRLTSFMEDHKLVIEDWDLGARICISLYVTRSSL 358
           +H +IWRL + MEDHK  IEDWDLGA I IS Y+ RSSL
Sbjct: 868 EHSEIWRLAASMEDHKSEIEDWDLGAGIYISFYLLRSSL 906


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