BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00022089
         (581 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ...   225   6e-57
ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) ...   225   6e-57
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]         225   8e-57
gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]         221   1e-55
ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy...   218   7e-55
gb|ADD30906.1| putative RF1 protein [Ilex cornuta]                    215   6e-54
gb|AEX58592.1| hypothetical chloroplast RF19 (chloroplast) [Theo...   213   3e-53
gb|AEX57863.1| hypothetical chloroplast RF19 (chloroplast) [Theo...   213   3e-53
gb|AEX57782.1| hypothetical chloroplast RF19 (chloroplast) [Theo...   213   3e-53
gb|ADO64947.2| hypothetical chloroplast RF1 [Theobroma cacao]         213   3e-53
ref|YP_004021361.1| hypothetical chloroplast RF19 [Theobroma cac...   213   3e-53
gb|ADD30912.1| putative RF1 protein [Ximenia americana]               213   4e-53
gb|AEX58511.1| hypothetical chloroplast RF19 (chloroplast) [Theo...   211   9e-53
ref|YP_005296157.1| ycf1 gene product (chloroplast) [Pentactina ...   208   7e-52
gb|ADD30903.1| putative RF1 protein [Aucuba japonica]                 206   5e-51
ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [...   203   3e-50
gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camel...   203   3e-50
ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [...   203   3e-50
ref|YP_005087738.1| hypothetical chloroplast RF1 (chloroplast) [...   202   5e-50
gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]               202   5e-50

>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
            gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
            (chloroplast) [Liquidambar formosana]
          Length = 1878

 Score =  225 bits (574), Expect = 6e-57
 Identities = 122/200 (61%), Positives = 137/200 (68%), Gaps = 12/200 (6%)
 Frame = -2

Query: 565  KASNYQKVDKTDKKAFFSITIHQDQEINPSNKKRFDWMGMNEEILNRPISNLELWFFSEF 386
            K  NYQ ++K DKK  F +TIHQDQEI  SNKKRFDWMGMNEEIL+RPISNLE WFFSEF
Sbjct: 1459 KTRNYQIIEKIDKKDLFYLTIHQDQEIKSSNKKRFDWMGMNEEILSRPISNLEFWFFSEF 1518

Query: 385  VLLYNAYKKKPWVIPIKLLLLNFTENGNVSENI----KGEQKGDFFXXXXXXXXXXXXXX 218
            VLLYNAYK KPWVIPIKLLLLNFTE  NVSEN     K +QKGD F              
Sbjct: 1519 VLLYNAYKIKPWVIPIKLLLLNFTETENVSENKNINGKQKQKGDLFIPSNEKKSLELENQ 1578

Query: 217  ETAG-----QGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIELNFLLKKYLLF 62
                     QGD+  V+SNQEKG+E+DY  S           KSN E EL+F LK++L F
Sbjct: 1579 NQEEKEPTIQGDIGAVISNQEKGVEEDYVGSDIKKRIKKKKYKSNMEAELDFFLKRHLRF 1638

Query: 61   QLRWDDSVNQRILNNIKVYC 2
            QLRW+ S+N+RILNNIKVYC
Sbjct: 1639 QLRWEGSLNERILNNIKVYC 1658


>ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense]
            gi|403226837|gb|AFR25716.1| hypothetical chloroplast RF19
            (chloroplast) [Penthorum chinense]
          Length = 1805

 Score =  225 bits (574), Expect = 6e-57
 Identities = 120/201 (59%), Positives = 141/201 (70%), Gaps = 8/201 (3%)
 Frame = -2

Query: 580  SNKNTKASNYQKVDKTDKKAFFSITIHQDQEINPSNKKRFDWMGMNEEILNRPISNLELW 401
            S KNTK SNYQ +DK DKK  F + IHQDQE  PS +K FDWMGMNEEILNRPISNLELW
Sbjct: 1396 SKKNTKTSNYQIIDKIDKKGLFYLKIHQDQENTPS-QKFFDWMGMNEEILNRPISNLELW 1454

Query: 400  FFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF-----XXXXXXXX 236
            FF EF+LLYNAYK KPWVIP+KLLL N  EN + ++N+ G+QKGD F             
Sbjct: 1455 FFPEFMLLYNAYKIKPWVIPMKLLLFNENENVSENKNLTGKQKGDLFISSHKKKSLELET 1514

Query: 235  XXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIELNFLLKKYLL 65
                  E   QG++  VLSNQEK +++DYT S           KSNTE EL+F LK+YLL
Sbjct: 1515 QNKEEKEPVDQGNLGSVLSNQEKDVDEDYTGSDIKKRRKKKQYKSNTEAELDFFLKRYLL 1574

Query: 64   FQLRWDDSVNQRILNNIKVYC 2
            FQLRWD+S+NQR++NNIKVYC
Sbjct: 1575 FQLRWDESLNQRVINNIKVYC 1595


>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
          Length = 1909

 Score =  225 bits (573), Expect = 8e-57
 Identities = 125/217 (57%), Positives = 144/217 (66%), Gaps = 24/217 (11%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKNTK   +NYQ +DK DKK  FS+TIHQDQEINP NKK+  FDWMGMNEEILNRPISN
Sbjct: 1474 SNKNTKTGTNNYQIIDKIDKKGLFSLTIHQDQEINPPNKKKNLFDWMGMNEEILNRPISN 1533

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSE--NIKGEQKGDFF------- 260
            LELWFF E VLLYNAYK KPWVIPIKLLLLN+  N N+SE  NI G+QK D F       
Sbjct: 1534 LELWFFPELVLLYNAYKIKPWVIPIKLLLLNYNGNENISENKNINGKQKKDLFIPSNEKK 1593

Query: 259  --------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXK 113
                                  +T   G++   LSNQ+K +E+DY  S           K
Sbjct: 1594 SLELENRNQEEKEPAGQRDLGSDTQNHGNLGSDLSNQQKDVEEDYAGSDMKKRRKKKQSK 1653

Query: 112  SNTEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            SNTE EL+F LK+YLLFQLRW+D +NQR++NNIKVYC
Sbjct: 1654 SNTEAELDFFLKRYLLFQLRWNDPLNQRLINNIKVYC 1690


>gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]
          Length = 1882

 Score =  221 bits (562), Expect = 1e-55
 Identities = 122/205 (59%), Positives = 139/205 (67%), Gaps = 12/205 (5%)
 Frame = -2

Query: 580  SNKNTKASNYQKVDKTDKKAFFSITIHQDQEINPSNKKRFDWMGMNEEILNRPISNLELW 401
            +N+N K  NYQ ++K DKK  F +TIHQDQE   SNKKRFDWMGMNEEIL+RPISNLE W
Sbjct: 1459 TNRN-KTRNYQIIEKIDKKDLFYLTIHQDQEKKSSNKKRFDWMGMNEEILSRPISNLEFW 1517

Query: 400  FFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENI----KGEQKGDFFXXXXXXXXX 233
            FFSEFVLLYNAYK KPWVIPIKLLLLNFTE  NVSEN     K +QK D F         
Sbjct: 1518 FFSEFVLLYNAYKIKPWVIPIKLLLLNFTETENVSENKNINGKQKQKRDLFIPSNEKKSL 1577

Query: 232  XXXXXETAG-----QGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIELNFLLK 77
                          QGD+  V+SNQEKG+E+DY  S           KSN E EL+F LK
Sbjct: 1578 ELENQNQEEKEPTIQGDIGAVISNQEKGVEEDYVGSDIKKRIKKKKYKSNMEAELDFFLK 1637

Query: 76   KYLLFQLRWDDSVNQRILNNIKVYC 2
            ++L FQLRW+ S+N+RILNNIKVYC
Sbjct: 1638 RHLRFQLRWEGSLNERILNNIKVYC 1662


>ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla]
            gi|182702240|sp|A6MM95.1|YCF1_BUXMI RecName:
            Full=Putative membrane protein ycf1; Short=RF1
            gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1
            [Buxus microphylla]
          Length = 1859

 Score =  218 bits (556), Expect = 7e-55
 Identities = 128/216 (59%), Positives = 142/216 (65%), Gaps = 24/216 (11%)
 Frame = -2

Query: 577  NKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISNL 410
            NKNTK   +NYQ +DK DKK  F +TIHQ  EINPSN+K+  FDWMGMNEEILNR ISNL
Sbjct: 1429 NKNTKTGTNNYQIIDKIDKKYLFYLTIHQ--EINPSNQKKNFFDWMGMNEEILNRTISNL 1486

Query: 409  ELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSE--NIKGEQKGDFF-----XXX 251
            ELWFF EFVLLYNAYK KPWVIPIKLLLLNF  N NVSE  NI  +QK D +        
Sbjct: 1487 ELWFFQEFVLLYNAYKIKPWVIPIKLLLLNFNRNKNVSENKNINKKQKNDLWIPFTEKKS 1546

Query: 250  XXXXXXXXXXXETAGQGD----------VRLVLSNQEKGIEKDYTRS---XXXXXXXXKS 110
                       ET GQGD          +  VLSNQ+K +E+DY  S            S
Sbjct: 1547 IELENRNQEEKETRGQGDLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTS 1606

Query: 109  NTEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            NTE ELNFLLK+YLLFQLRWDD  NQR++NNIKVYC
Sbjct: 1607 NTEAELNFLLKRYLLFQLRWDDPFNQRMINNIKVYC 1642


>gb|ADD30906.1| putative RF1 protein [Ilex cornuta]
          Length = 1897

 Score =  215 bits (548), Expect = 6e-54
 Identities = 121/218 (55%), Positives = 139/218 (63%), Gaps = 25/218 (11%)
 Frame = -2

Query: 580  SNKNTK--ASNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNK TK   +NY  +DK DKK  F +TIHQD EINP N K+  FDWMGMNEEILN PISN
Sbjct: 1461 SNKKTKIGTNNYPIIDKIDKKGLFYLTIHQDLEINPPNHKKIFFDWMGMNEEILNCPISN 1520

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSEN--IKGEQKGDFFXXXXXXX 239
            LELWFF EFVLLYNAYK KPW+IP KLLLLN   N NVSEN  + G+ KG+FF       
Sbjct: 1521 LELWFFPEFVLLYNAYKMKPWIIPSKLLLLNLNINENVSENKNVNGKPKGNFFIPSNEEK 1580

Query: 238  XXXXXXXETA----------------GQGDVRLVLSNQEKGIEKDYTRSXXXXXXXXK-- 113
                                       Q ++  +LSNQ+K IE+DY RS        K  
Sbjct: 1581 KSFELKNRNQEEKEPADRRDRGSDAQNQRNLGSLLSNQQKDIEEDYARSDMKKRKTKKQY 1640

Query: 112  -SNTEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
             SNTE ELNF LK+YLLFQLRWDD++NQR++NNIKVYC
Sbjct: 1641 KSNTEAELNFFLKRYLLFQLRWDDALNQRMINNIKVYC 1678


>gb|AEX58592.1| hypothetical chloroplast RF19 (chloroplast) [Theobroma cacao]
          Length = 1889

 Score =  213 bits (542), Expect = 3e-53
 Identities = 119/215 (55%), Positives = 140/215 (65%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKN K   +NYQ +DK +K+  F  TI+QDQE NPSNKKR  FDWMGMNEEIL+RPISN
Sbjct: 1458 SNKNIKTVVNNYQIIDKINKRGLFYFTIYQDQESNPSNKKRSPFDWMGMNEEILSRPISN 1517

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK K W+IPIKLLLLNF  NGN+++ I   +K D           
Sbjct: 1518 LELWFFPEFVLLYNAYKVKSWIIPIKLLLLNFNGNGNINKKIIENKKRDSLIASNEKKFI 1577

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG++R +LSNQEK  E+DY +S           KSN
Sbjct: 1578 GLENRNQEEKEPIGQGNPVSDAQKQGNLRSILSNQEKDGEEDYGKSDIKKRKKKKQYKSN 1637

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1638 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1672


>gb|AEX57863.1| hypothetical chloroplast RF19 (chloroplast) [Theobroma cacao]
            gi|371926156|gb|AEX57944.1| hypothetical chloroplast RF19
            (chloroplast) [Theobroma cacao]
          Length = 1889

 Score =  213 bits (542), Expect = 3e-53
 Identities = 119/215 (55%), Positives = 140/215 (65%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKN K   +NYQ +DK +K+  F  TI+QDQE NPSNKKR  FDWMGMNEEIL+RPISN
Sbjct: 1458 SNKNIKTVVNNYQIIDKINKRGLFYFTIYQDQESNPSNKKRSPFDWMGMNEEILSRPISN 1517

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK K W+IPIKLLLLNF  NGN+++ I   +K D           
Sbjct: 1518 LELWFFPEFVLLYNAYKVKSWIIPIKLLLLNFNGNGNINKKIIENKKRDSLIASNEKKFI 1577

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG++R +LSNQEK  E+DY +S           KSN
Sbjct: 1578 GLENRNQEEKEPIGQGNPVSDAQKQGNLRSILSNQEKDGEEDYGKSDIKKRKKKKQYKSN 1637

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1638 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1672


>gb|AEX57782.1| hypothetical chloroplast RF19 (chloroplast) [Theobroma cacao]
            gi|371926402|gb|AEX58187.1| hypothetical chloroplast RF19
            (chloroplast) [Theobroma cacao]
            gi|371926484|gb|AEX58268.1| hypothetical chloroplast RF19
            (chloroplast) [Theobroma cacao]
            gi|371926566|gb|AEX58349.1| hypothetical chloroplast RF19
            (chloroplast) [Theobroma cacao]
            gi|371926648|gb|AEX58430.1| hypothetical chloroplast RF19
            (chloroplast) [Theobroma cacao]
          Length = 1889

 Score =  213 bits (542), Expect = 3e-53
 Identities = 119/215 (55%), Positives = 140/215 (65%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKN K   +NYQ +DK +K+  F  TI+QDQE NPSNKKR  FDWMGMNEEIL+RPISN
Sbjct: 1458 SNKNIKTVVNNYQIIDKINKRGLFYFTIYQDQESNPSNKKRSPFDWMGMNEEILSRPISN 1517

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK K W+IPIKLLLLNF  NGN+++ I   +K D           
Sbjct: 1518 LELWFFPEFVLLYNAYKVKSWIIPIKLLLLNFNGNGNINKKIIENKKRDSLIASNEKKFI 1577

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG++R +LSNQEK  E+DY +S           KSN
Sbjct: 1578 GLENRNQEEKEPIGQGNPVSDAQKQGNLRSILSNQEKDGEEDYGKSDIKKRKKKKQYKSN 1637

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1638 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1672


>gb|ADO64947.2| hypothetical chloroplast RF1 [Theobroma cacao]
          Length = 1887

 Score =  213 bits (542), Expect = 3e-53
 Identities = 119/215 (55%), Positives = 140/215 (65%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKN K   +NYQ +DK +K+  F  TI+QDQE NPSNKKR  FDWMGMNEEIL+RPISN
Sbjct: 1456 SNKNIKTVVNNYQIIDKINKRGLFYFTIYQDQESNPSNKKRSPFDWMGMNEEILSRPISN 1515

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK K W+IPIKLLLLNF  NGN+++ I   +K D           
Sbjct: 1516 LELWFFPEFVLLYNAYKVKSWIIPIKLLLLNFNGNGNINKKIIENKKRDSLIASNEKKFI 1575

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG++R +LSNQEK  E+DY +S           KSN
Sbjct: 1576 GLENRNQEEKEPIGQGNPVSDAQKQGNLRSILSNQEKDGEEDYGKSDIKKRKKKKQYKSN 1635

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1636 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1670


>ref|YP_004021361.1| hypothetical chloroplast RF19 [Theobroma cacao]
            gi|309321311|gb|ADO64854.1| hypothetical chloroplast RF19
            [Theobroma cacao] gi|371926238|gb|AEX58025.1|
            hypothetical chloroplast RF19 (chloroplast) [Theobroma
            cacao] gi|371926320|gb|AEX58106.1| hypothetical
            chloroplast RF19 (chloroplast) [Theobroma cacao]
          Length = 1889

 Score =  213 bits (542), Expect = 3e-53
 Identities = 119/215 (55%), Positives = 140/215 (65%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKN K   +NYQ +DK +K+  F  TI+QDQE NPSNKKR  FDWMGMNEEIL+RPISN
Sbjct: 1458 SNKNIKTVVNNYQIIDKINKRGLFYFTIYQDQESNPSNKKRSPFDWMGMNEEILSRPISN 1517

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK K W+IPIKLLLLNF  NGN+++ I   +K D           
Sbjct: 1518 LELWFFPEFVLLYNAYKVKSWIIPIKLLLLNFNGNGNINKKIIENKKRDSLIASNEKKFI 1577

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG++R +LSNQEK  E+DY +S           KSN
Sbjct: 1578 GLENRNQEEKEPIGQGNPVSDAQKQGNLRSILSNQEKDGEEDYGKSDIKKRKKKKQYKSN 1637

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1638 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1672


>gb|ADD30912.1| putative RF1 protein [Ximenia americana]
          Length = 1895

 Score =  213 bits (541), Expect = 4e-53
 Identities = 125/217 (57%), Positives = 141/217 (64%), Gaps = 24/217 (11%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSI--TIHQDQEINPSNKKRF--DWMGMNEEILNRPI 419
            SNKNTK   +NYQ +DK DKK+ F +  TIHQ  EINPSN KRF  DWMGMNEEILNRPI
Sbjct: 1464 SNKNTKTGTNNYQIIDKIDKKSLFYLYPTIHQ--EINPSNPKRFFLDWMGMNEEILNRPI 1521

Query: 418  SNLELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF-----XX 254
            SN+ LWFF EFVLLYN YK KPWVIPIKLLLLNF EN   ++NI G+QK D F       
Sbjct: 1522 SNMRLWFFPEFVLLYNGYKIKPWVIPIKLLLLNFNENVRENKNINGKQKKDLFISSNEKQ 1581

Query: 253  XXXXXXXXXXXXETAGQGD----------VRLVLSNQEKGIEKDYTRS---XXXXXXXXK 113
                        E  GQGD          +   LSNQ+K +E+DY RS           K
Sbjct: 1582 SFELKNRNQEEKEPTGQGDFGSDIQNQENLGSPLSNQQKDVEEDYARSNMKKRKKKKQYK 1641

Query: 112  SNTEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            SN E EL+F LK+YLLFQLRWDD +NQ+ILNNIKVYC
Sbjct: 1642 SNAEAELDFFLKRYLLFQLRWDDPLNQKILNNIKVYC 1678


>gb|AEX58511.1| hypothetical chloroplast RF19 (chloroplast) [Theobroma grandiflorum]
          Length = 1889

 Score =  211 bits (538), Expect = 9e-53
 Identities = 118/215 (54%), Positives = 140/215 (65%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKN K   +NYQ +DK +K+  F  TI+QDQE NPSNKKR  FDWMGMNEEIL+RPISN
Sbjct: 1458 SNKNIKTVVNNYQIIDKINKRGLFYFTIYQDQESNPSNKKRSPFDWMGMNEEILSRPISN 1517

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK K W+IPIKLLLLNF  NGN+++ I   +K +           
Sbjct: 1518 LELWFFPEFVLLYNAYKVKSWIIPIKLLLLNFNGNGNINKKIIENKKRESLIASNEKKIL 1577

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG++R +LSNQEK  E+DY +S           KSN
Sbjct: 1578 GLENRNQEEKEPIGQGNPVSDAQKQGNLRSILSNQEKDGEEDYGKSDIKKRKKKKQYKSN 1637

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1638 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1672


>ref|YP_005296157.1| ycf1 gene product (chloroplast) [Pentactina rupicola]
            gi|371532678|gb|AEX31788.1| hypothetical chloroplast RF1
            (chloroplast) [Pentactina rupicola]
          Length = 1879

 Score =  208 bits (530), Expect = 7e-52
 Identities = 117/206 (56%), Positives = 140/206 (67%), Gaps = 13/206 (6%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR-FDWMGMNEEILNRPISNL 410
            SNK TK   + YQ +DK +KK  F +TI QDQEIN SN+KR FDWMGMNEEIL+RPISNL
Sbjct: 1463 SNKYTKTGVNKYQIIDKINKKGLFYVTIQQDQEINLSNEKRVFDWMGMNEEILSRPISNL 1522

Query: 409  ELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSEN--IKGEQKGDFF-----XXX 251
            ELWFF EF++LYN YK KPWVIPIKLLL +   N N SEN  I G +KGD F        
Sbjct: 1523 ELWFFPEFLILYNTYKIKPWVIPIKLLLFHSNINENASENKSIAGNKKGDPFISSNEKKS 1582

Query: 250  XXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRSXXXXXXXXKS---NTEIELNFLL 80
                       E+AG+ D++ VLSNQEK +E+DYT S        K    NT+ E +F L
Sbjct: 1583 LELENRNQGEKESAGRADLKSVLSNQEKDVEEDYTGSDMKKYRNKKQYKINTKAEFDFFL 1642

Query: 79   KKYLLFQLRWDDSVNQRILNNIKVYC 2
            K+YL FQLRWDDS+N++I+NNIKVYC
Sbjct: 1643 KRYLHFQLRWDDSLNKKIINNIKVYC 1668


>gb|ADD30903.1| putative RF1 protein [Aucuba japonica]
          Length = 1890

 Score =  206 bits (523), Expect = 5e-51
 Identities = 120/217 (55%), Positives = 139/217 (64%), Gaps = 24/217 (11%)
 Frame = -2

Query: 580  SNKNTK--ASNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISN 413
            SNKNTK   +NYQ ++K +KK  F +TIHQD EINP N K+  FDWMGMNEEILNRPISN
Sbjct: 1455 SNKNTKIGTNNYQIIEKINKKGLFYLTIHQDSEINPPNPKKIFFDWMGMNEEILNRPISN 1514

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSE--NIKGEQKGDFF-----XX 254
            LELWFF EFVLLYN+YK K WVIP KLLLL F  N NV+E  NI G+QK +FF       
Sbjct: 1515 LELWFFPEFVLLYNSYKIKSWVIPNKLLLLRFNINENVNENKNINGKQKENFFISSNEKK 1574

Query: 253  XXXXXXXXXXXXETAGQGDVRLVLSNQ----------EKGIEKDYTRS---XXXXXXXXK 113
                        E   QGD+R  + NQ          +K IE+DY  S           K
Sbjct: 1575 SFELKNLNQEEKEPTDQGDLRSYVQNQKNLGSLVSTHQKDIEEDYAGSDTKKHKKKKQYK 1634

Query: 112  SNTEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            SNTE EL   LK+YLLFQLRWDD++NQR++NNIKVYC
Sbjct: 1635 SNTEAELKSFLKRYLLFQLRWDDALNQRMINNIKVYC 1671


>ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis]
            gi|537362942|gb|AGU44744.1| hypothetical chloroplast RF1
            (chloroplast) [Camellia taliensis]
          Length = 1869

 Score =  203 bits (516), Expect = 3e-50
 Identities = 116/210 (55%), Positives = 139/210 (66%), Gaps = 18/210 (8%)
 Frame = -2

Query: 577  NKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISNL 410
            NKNTK   +NYQ +DK DKK  F +TI QDQEIN  N+K+  FDWMGMNEEIL+RPISNL
Sbjct: 1440 NKNTKTGTNNYQIIDKIDKKDLFYLTIPQDQEINSPNQKKRFFDWMGMNEEILSRPISNL 1499

Query: 409  ELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDF-FXXXXXXXXX 233
            +LWFF EFVLLYNAYK KPW IP KLL  N  ENG+ ++NI  +QKG             
Sbjct: 1500 KLWFFPEFVLLYNAYKIKPWFIPSKLLFFNINENGSENKNINRKQKGVIPSNEKKKMELK 1559

Query: 232  XXXXXETAGQGDVR----------LVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIEL 92
                 E+AGQ D+R           V S ++K IE+DY+ S           KSNTE EL
Sbjct: 1560 NKKEKESAGQRDLRSNAQNQVNLVSVPSTEQKDIEEDYSESNMKNRKKKKQYKSNTEAEL 1619

Query: 91   NFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            +F LKKYLLFQLRWD+++NQR++NNIKVYC
Sbjct: 1620 DFFLKKYLLFQLRWDNALNQRMINNIKVYC 1649


>gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis]
          Length = 1869

 Score =  203 bits (516), Expect = 3e-50
 Identities = 116/210 (55%), Positives = 139/210 (66%), Gaps = 18/210 (8%)
 Frame = -2

Query: 577  NKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISNL 410
            NKNTK   +NYQ +DK DKK  F +TI QDQEIN  N+K+  FDWMGMNEEIL+RPISNL
Sbjct: 1440 NKNTKTGTNNYQIIDKIDKKDLFYLTIPQDQEINSPNQKKRFFDWMGMNEEILSRPISNL 1499

Query: 409  ELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDF-FXXXXXXXXX 233
            +LWFF EFVLLYNAYK KPW IP KLL  N  ENG+ ++NI  +QKG             
Sbjct: 1500 KLWFFPEFVLLYNAYKIKPWFIPSKLLFFNINENGSENKNINRKQKGVIPSNEKKKMELK 1559

Query: 232  XXXXXETAGQGDVR----------LVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIEL 92
                 E+AGQ D+R           V S ++K IE+DY+ S           KSNTE EL
Sbjct: 1560 NKKEKESAGQRDLRSNAQNQVNLVSVPSTEQKDIEEDYSESNMKNRKKKKQYKSNTEAEL 1619

Query: 91   NFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            +F LKKYLLFQLRWD+++NQR++NNIKVYC
Sbjct: 1620 DFFLKKYLLFQLRWDNALNQRMINNIKVYC 1649


>ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [Camellia cuspidata]
            gi|537362404|gb|AGU44212.1| hypothetical chloroplast RF1
            (chloroplast) [Camellia cuspidata]
          Length = 1869

 Score =  203 bits (516), Expect = 3e-50
 Identities = 116/210 (55%), Positives = 139/210 (66%), Gaps = 18/210 (8%)
 Frame = -2

Query: 577  NKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISNL 410
            NKNTK   +NYQ +DK DKK  F +TI QDQEIN  N+K+  FDWMGMNEEIL+RPISNL
Sbjct: 1440 NKNTKTGTNNYQIIDKIDKKDLFYLTIPQDQEINSPNQKKIFFDWMGMNEEILSRPISNL 1499

Query: 409  ELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDF-FXXXXXXXXX 233
            +LWFF EFVLLYNAYK KPW IP KLL  N  ENG+ ++NI  +QKG             
Sbjct: 1500 KLWFFPEFVLLYNAYKIKPWFIPSKLLFFNINENGSENKNINRKQKGVIPSNEKKKMELK 1559

Query: 232  XXXXXETAGQGDVR----------LVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIEL 92
                 E+AGQ D+R           V S ++K IE+DY+ S           KSNTE EL
Sbjct: 1560 NKNKKESAGQRDLRSNAQNQVNLVSVPSTEQKDIEEDYSESNMKNRKKKKQYKSNTEAEL 1619

Query: 91   NFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            +F LKKYLLFQLRWD+++NQR++NNIKVYC
Sbjct: 1620 DFFLKKYLLFQLRWDNALNQRMINNIKVYC 1649


>ref|YP_005087738.1| hypothetical chloroplast RF1 (chloroplast) [Gossypium raimondii]
            gi|318084705|gb|ADV39177.1| hypothetical chloroplast RF1
            (chloroplast) [Gossypium raimondii]
          Length = 1894

 Score =  202 bits (514), Expect = 5e-50
 Identities = 115/215 (53%), Positives = 134/215 (62%), Gaps = 22/215 (10%)
 Frame = -2

Query: 580  SNKNTKA--SNYQKVDKTDKKAFFSITIHQDQEINPSNKK--RFDWMGMNEEILNRPISN 413
            SNKN K    NYQ +DK D    F  TI+QDQE NPSNKK   FDWMG+NEEIL+ PI N
Sbjct: 1466 SNKNIKTVVKNYQLIDKMD---LFYFTIYQDQESNPSNKKGSHFDWMGLNEEILSHPIPN 1522

Query: 412  LELWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNVSENIKGEQKGDFF--------- 260
            LELWFF EFVLLYNAYK KPW+IPIKLLL NF  N N+++NI   +K D           
Sbjct: 1523 LELWFFPEFVLLYNAYKVKPWIIPIKLLLFNFNGNRNINKNIIENKKRDSLIAPNEKQII 1582

Query: 259  ------XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSN 107
                                +   QG+ + VLSNQEK +E+DY +S           KSN
Sbjct: 1583 GLENRNQEEKEPIGEGDLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSN 1642

Query: 106  TEIELNFLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
            TE EL+F LK+YL FQLRWDDS+NQRI+NNIKVYC
Sbjct: 1643 TEAELDFFLKRYLRFQLRWDDSLNQRIINNIKVYC 1677


>gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]
          Length = 1814

 Score =  202 bits (514), Expect = 5e-50
 Identities = 112/209 (53%), Positives = 133/209 (63%), Gaps = 16/209 (7%)
 Frame = -2

Query: 580  SNKNTKASNYQKVDKTDKKAFFSITIHQDQEINPSNKKR--FDWMGMNEEILNRPISNLE 407
            +  N    NY+ +DK DKK  F +TIHQD +IN  N ++  FDWM MNEEILNRPISNLE
Sbjct: 1386 TKSNQSTHNYKIIDKIDKKDLFYLTIHQDPKINSINPQKVLFDWMEMNEEILNRPISNLE 1445

Query: 406  LWFFSEFVLLYNAYKKKPWVIPIKLLLLNFTENGNV--SENIKGEQKGDFF--------- 260
            LWFF EFV LYNAYK KPWVIP KLLLLN+  N NV  ++NI G+Q+ DFF         
Sbjct: 1446 LWFFPEFVRLYNAYKMKPWVIPSKLLLLNWNRNENVGANKNINGKQRVDFFISSNKKIKH 1505

Query: 259  XXXXXXXXXXXXXXETAGQGDVRLVLSNQEKGIEKDYTRS---XXXXXXXXKSNTEIELN 89
                              QG+   VL+NQ+K IE+DY  S           KSNTE EL+
Sbjct: 1506 RNQEEPIDQGDLGSNVQNQGNFGSVLANQQKDIEEDYVGSAMKKGKKKKQYKSNTEAELD 1565

Query: 88   FLLKKYLLFQLRWDDSVNQRILNNIKVYC 2
              LK+YLLFQLRWDDS+NQR++NNIKVYC
Sbjct: 1566 IFLKRYLLFQLRWDDSLNQRMINNIKVYC 1594