BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00021868
         (1576 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   744   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              734   0.0  
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...   721   0.0  
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   719   0.0  
ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prun...   719   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   717   0.0  
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   710   0.0  
ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phas...   709   0.0  
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   708   0.0  
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   705   0.0  
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   704   0.0  
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           702   0.0  
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           702   0.0  
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   692   0.0  
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   692   0.0  
gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Mimulus...   688   0.0  
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   687   0.0  
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   675   0.0  
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   674   0.0  
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   672   0.0  

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  744 bits (1920), Expect = 0.0
 Identities = 364/479 (75%), Positives = 414/479 (86%), Gaps = 11/479 (2%)
 Frame = -3

Query: 1493 MRKKVLHRC--VFLGARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPP 1320
            M K VLH C  +F   R+YSRI PP PA  A VIRVSNN+A+LG PKEGPKPRQLLSLPP
Sbjct: 1    MWKNVLHECQGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPP 60

Query: 1319 FPAHPLPGKE-------GTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFV 1161
            FPAHPLPGK         THVTAISWIKYYF +I    +QSHFNKGLV ME  NLD+S +
Sbjct: 61   FPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSL 120

Query: 1160 GKEGQIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRL 981
             KEGQIK +RKIKP+EVMEAG R++VPVSV E RIS+RFDTIPSGTL+PNADEI YLQRL
Sbjct: 121  EKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRL 180

Query: 980  VMYKDSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLL 801
            V YKD AI+VLNKPPK+P+KGNLPVHNS+D LAAAAL++DY+EGPKLVHRLDRESSGLLL
Sbjct: 181  VTYKDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLL 240

Query: 800  MGRTKDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSK 621
            MGRTK+SVA+L WLF  +N AK+  K W+DACEAT  +YWALVIGSP++KEG+I APLSK
Sbjct: 241  MGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSK 300

Query: 620  VLLNDGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAE 441
            VLL+DGKTERVILA  S LE SQ+AITEYRVLGPMINGCSWIEL P TSRKHQLR+HCAE
Sbjct: 301  VLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAE 360

Query: 440  ALGTPIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHL 261
            ALGTPIVGDYKYGWF H++WKQMP+VD+EPT+GKPYK+RRP+GLDVQKGSVLSKVPLLHL
Sbjct: 361  ALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHL 420

Query: 260  HCREVVLPNISKFQKVLD--QQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            HCRE++LPNI+KF  +LD   +++ +YP+LS KPDILRFVASMP+HMKISWNLMSSYLV
Sbjct: 421  HCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  734 bits (1896), Expect = 0.0
 Identities = 361/481 (75%), Positives = 414/481 (86%), Gaps = 13/481 (2%)
 Frame = -3

Query: 1493 MRKKVLHRC--VFLGARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPP 1320
            M K VLH C  +F   R+YSRI PP PA  A VIRVSNN+A+LG PKEGPKPRQLLSLPP
Sbjct: 1    MWKNVLHECQGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPP 60

Query: 1319 FPAHPLPGKE-------GTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFV 1161
            FPAHPLPGK         THVTAISWIKYYF +I    +QSHFNKGLV ME  NLD+S +
Sbjct: 61   FPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSL 120

Query: 1160 GKEGQIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRL 981
             KEGQIK +RKIKP+EVMEAG R++VPVSV E RIS+RFDTIPSGTL+PNADEI YLQRL
Sbjct: 121  EKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRL 180

Query: 980  --VMYKDSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGL 807
              + ++D AI+VLNKPPK+P+KGNLPVHNS+D LAAAAL++DY+EGPKLVHRLDRESSGL
Sbjct: 181  WLLKFQDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGL 240

Query: 806  LLMGRTKDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPL 627
            LLMGRTK+SVA+L WLF  +N AK+  K W+DACEAT  +YWALVIGSP++KEG+I APL
Sbjct: 241  LLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPL 300

Query: 626  SKVLLNDGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHC 447
            SKVLL+DGKTERVILA  S LE SQ+AITEYRVLGPMINGCSWIEL P TSRKHQLR+HC
Sbjct: 301  SKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHC 360

Query: 446  AEALGTPIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLL 267
            AEALGTPIVGDYKYGWF H++WKQMP+VD+EPT+GKPYK+RRP+GLDVQKGSVLSKVPLL
Sbjct: 361  AEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLL 420

Query: 266  HLHCREVVLPNISKFQKVLD--QQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYL 93
            HLHCRE++LPNI+KF  +LD   +++ +YP+LS KPDILRFVASMP+HMKISWNLMSSYL
Sbjct: 421  HLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYL 480

Query: 92   V 90
            V
Sbjct: 481  V 481


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508779021|gb|EOY26277.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 471

 Score =  721 bits (1861), Expect = 0.0
 Identities = 348/457 (76%), Positives = 397/457 (86%), Gaps = 3/457 (0%)
 Frame = -3

Query: 1451 RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKE--GT-H 1281
            R+YSR+ PPPPA    V+RVSN++A LG PK+GPKPRQLLSLPPFP +PLPGK   GT  
Sbjct: 15   RHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGYPLPGKNPGGTAR 74

Query: 1280 VTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPSEVMEA 1101
            VTAISW+KYYF +I   AIQSHFNKGLVQME  N  ++ + ++G +K +RKIK +EVME 
Sbjct: 75   VTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRKIKHNEVMEV 134

Query: 1100 GVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPPKLPVK 921
            G RV+VPVS+ ETRIS+RFD IPSGTLYPN DEI YLQRLV YKD AI+VLNKPPKLPVK
Sbjct: 135  GTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVLNKPPKLPVK 194

Query: 920  GNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLFGGVNV 741
            G+LPVHNS+D LAAAALSYD+DEGPKLVHRLDRESSGLLLMGRTK+SVA+L WLF  +N 
Sbjct: 195  GSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFNDLNT 254

Query: 740  AKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAYPSSLE 561
             K+SCK WNDAC+  Y ++WALVIG+P+EKEGLICAPLSK+LL+DGKTERVILA    LE
Sbjct: 255  VKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQNVGLE 314

Query: 560  PSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWFAHQKW 381
             SQ+AITEYRVLGPMINGCSWIELRP TSRKHQLR+HCAEALGTPIVGDYKYGWF H++W
Sbjct: 315  ASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRW 374

Query: 380  KQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQKVLDQQ 201
            KQMP+VDIEPT+GKPYKLRRP+GLDVQKGSVLSKVPLLHLHCRE+VLPNI+KF  VL++ 
Sbjct: 375  KQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVLNKN 434

Query: 200  SEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            +E   P LS KPD+LRFVA+MP HMKISWNLMSSYLV
Sbjct: 435  TETLPPALSMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform X1
            [Cicer arietinum]
          Length = 479

 Score =  719 bits (1855), Expect = 0.0
 Identities = 344/461 (74%), Positives = 397/461 (86%), Gaps = 7/461 (1%)
 Frame = -3

Query: 1451 RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKEGT---- 1284
            R+YSRIRPP P    +VIRVSNNIA+L +PKEGPKPRQLLSLPPFP HPLPGK  T    
Sbjct: 19   RHYSRIRPPKPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPCHPLPGKNSTSAPG 78

Query: 1283 ---HVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPSE 1113
               HVTA++WIKYYF       I+SHF +GLVQME   +D+SF  K+  +K MRKI+P+E
Sbjct: 79   KRDHVTAVNWIKYYFKGTSGSVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRKIRPNE 138

Query: 1112 VMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPPK 933
            VM+ G RV V VS+ ET+IS+RFD IPSGTL PNADEI YLQRLV+YKDSAII+LNKPPK
Sbjct: 139  VMKPGARVHVSVSMAETKISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIMLNKPPK 198

Query: 932  LPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLFG 753
            LPVKGNLPVHNS+D LAAAALSYDYD+GPKLVHRLDRESSG+LL+GRTKDSV++LQWLF 
Sbjct: 199  LPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFS 258

Query: 752  GVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAYP 573
             +N  K+SCK WNDACE+TY +YWALVIG+P+EKEG+I APLSKVLLNDGKTERVILA+ 
Sbjct: 259  NINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERVILAHE 318

Query: 572  SSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWFA 393
            SS+EP Q+A+TEYRVLGP INGCSW+ELRP T RKHQLR+HCAEALGTPIVGDYKYGWF 
Sbjct: 319  SSIEPHQEAVTEYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFV 378

Query: 392  HQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQKV 213
            H +WKQMP+VDIEPT+GKPYKLRRP+GLDVQKGSVLSKVPLLHLHCRE+ LPNI+KF  V
Sbjct: 379  HSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIAKFLNV 438

Query: 212  LDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            L++ S+   P LS +PD+LRFVA+MP+HM+ISWNLMSSYLV
Sbjct: 439  LEKSSQQLDPSLSLQPDVLRFVATMPNHMRISWNLMSSYLV 479


>ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
            gi|462405724|gb|EMJ11188.1| hypothetical protein
            PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  719 bits (1855), Expect = 0.0
 Identities = 352/475 (74%), Positives = 397/475 (83%), Gaps = 6/475 (1%)
 Frame = -3

Query: 1496 MMRKKVLHRCVFLGARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPF 1317
            M R+     C  +  R YSR+ PPP      +IRVSN++A+LG PKEGPKPRQLLSLPPF
Sbjct: 1    MWRRSTRVLCRHVARREYSRVCPPPAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPF 60

Query: 1316 PAHPLPGKEG------THVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGK 1155
            P HPLPGK        + VTA+SW+KYYF  I    IQSHF +GLVQMEC  + E    K
Sbjct: 61   PGHPLPGKRSHEGGVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMECPGMIE----K 116

Query: 1154 EGQIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVM 975
            EGQ+K MRKI+PSEVME G RV+VPVSVVE+R+SRRFD IPSGTLYPNADEI Y+QR V 
Sbjct: 117  EGQMKPMRKIRPSEVMEVGARVYVPVSVVESRVSRRFDCIPSGTLYPNADEIEYMQRRVK 176

Query: 974  YKDSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMG 795
            YKDSAIIVLNKPPKLPVKGNLPVHNS+D LAAAALSY  ++GPKLVHRLDRESSGL LMG
Sbjct: 177  YKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYGNNKGPKLVHRLDRESSGLHLMG 236

Query: 794  RTKDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVL 615
            RTK+SV+ LQWL+   N  K+SC+ W+DACEA Y +YWALVIGSP+EKEGLICAPLSKVL
Sbjct: 237  RTKESVSLLQWLYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVL 296

Query: 614  LNDGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEAL 435
            L++GKTERVILA+ S LE SQKAIT+YRVLGP INGCSWIELRP TSRKHQLR+HCAEAL
Sbjct: 297  LDNGKTERVILAHQSGLEASQKAITQYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEAL 356

Query: 434  GTPIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHC 255
            GTPIVGDYKYGWF H++WKQMP VD+EPTSG PYKLRRP GLDVQKGSVLSKVPLLHLHC
Sbjct: 357  GTPIVGDYKYGWFVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHC 416

Query: 254  REVVLPNISKFQKVLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            RE+VLPNI+KF  +LDQ+ +  +P +S+KPDILRFVASMPSHMKISWNLMSSYLV
Sbjct: 417  RELVLPNIAKFLLILDQKLDSLHPAVSSKPDILRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  717 bits (1850), Expect = 0.0
 Identities = 356/470 (75%), Positives = 395/470 (84%), Gaps = 2/470 (0%)
 Frame = -3

Query: 1493 MRKKVLHRCVFLGARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFP 1314
            M K +  R V    R+YSRI PPPPA    VIRVSNN+A LG PK+GPKPRQLLSLPPFP
Sbjct: 1    MWKNIYCRRVVSQGRSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFP 60

Query: 1313 AHPLPGKEG--THVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIK 1140
              PLPG+    +HVTAISW+KYYF +I   AIQSHFNKGL  +EC N   S   + G   
Sbjct: 61   GLPLPGRNSMASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSI--EYGGQM 118

Query: 1139 SMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSA 960
            S+RKIK +++MEAG RV V VSV ETRIS+RFDTIPSGTLYPNADEI YLQRLV YKDSA
Sbjct: 119  SLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSA 178

Query: 959  IIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDS 780
            IIVLNKPP+LPVKGNLP+HNS+D LAAAALSYDYDEGPKLV RLDRESSGLLLMGRTK+S
Sbjct: 179  IIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKES 238

Query: 779  VAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGK 600
            + +LQWLF  VN + + CK WNDAC+ATY +YWALVIGSP+EKEGLI APLSKVLLNDGK
Sbjct: 239  IDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGK 298

Query: 599  TERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIV 420
            TERV+LA  S LE SQ+A+TEYRVLGP INGCSWIELRP TSRKHQLR+HCAEALGTPIV
Sbjct: 299  TERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 358

Query: 419  GDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVL 240
            GDYKYGW  HQ+WKQMP+VDIEP SGKPYKLRRP GLDVQKGSVLSKVPLLHLHCRE VL
Sbjct: 359  GDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVL 418

Query: 239  PNISKFQKVLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            PNI+KF  VL+++SE  +P L  KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 419  PNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 476

 Score =  710 bits (1832), Expect = 0.0
 Identities = 345/462 (74%), Positives = 392/462 (84%), Gaps = 7/462 (1%)
 Frame = -3

Query: 1454 ARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKEGT--- 1284
            AR+YSRI+PP P     VI VSNNIA+L  PKEGPKPRQLLSLPPFP HPLP K      
Sbjct: 18   ARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSISGS 77

Query: 1283 ----HVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPS 1116
                +VTA++WIKYYF       I+SHF +GLVQME    D+S   KE Q+K MRKI+P+
Sbjct: 78   RQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEA---DDSSTQKEEQMKPMRKIRPN 134

Query: 1115 EVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPP 936
            EVM+ G RV VPVS+ ETRIS+R+D IPSGTLYPNADEI YLQRLV+YKDSAIIVLNKPP
Sbjct: 135  EVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPP 194

Query: 935  KLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLF 756
            KLPVKG+LPVHNS+D LAAAALSYDYDEGPKLVHRLDRESSG+LL+GRTKDSV++LQWLF
Sbjct: 195  KLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLF 254

Query: 755  GGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAY 576
              +N AK+SCK WN+ACEATY +YWALVIG+P+EKEG+I APLSKVLLNDGKTER+ILA+
Sbjct: 255  SNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAH 314

Query: 575  PSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWF 396
             SS+EP Q+A+TEYRVLGP INGCSW+ELRP T RKHQLR+HCAEALGTPIVGDYKYGWF
Sbjct: 315  HSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWF 374

Query: 395  AHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQK 216
             H +WKQMP+VDIEPT+GKPYKLRRP+GLDVQKGSVLSKVPLLHLHCRE+VLPNI KF  
Sbjct: 375  VHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMH 434

Query: 215  VLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            VL+  SE     L  +PD+LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 435  VLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 476


>ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
            gi|561034434|gb|ESW32964.1| hypothetical protein
            PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  709 bits (1829), Expect = 0.0
 Identities = 338/461 (73%), Positives = 392/461 (85%), Gaps = 7/461 (1%)
 Frame = -3

Query: 1451 RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKEGT---- 1284
            R+YSRI+PP P     VIRVSNN+A+L  PKEGPKPRQLLSLPPFP HPLP K  T    
Sbjct: 20   RHYSRIQPPRPVSVEPVIRVSNNVARLDAPKEGPKPRQLLSLPPFPGHPLPAKSSTSDPG 79

Query: 1283 ---HVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPSE 1113
               +VTA++WIKYYF       I+SHF +GLVQME     +S+  KE  +K MRKI+P+E
Sbjct: 80   QRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEDEVTADSYTQKENLMKPMRKIRPNE 139

Query: 1112 VMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPPK 933
            VM+ G RV VPVS+ ETR+S+R+D IP GTLYPNADEI YLQRLV+YKDSAIIVLNKPPK
Sbjct: 140  VMKHGARVHVPVSIAETRVSKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPK 199

Query: 932  LPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLFG 753
            LPVKGNLPVHNS+D LAAAALSYDYDEGPKLVHRLDRE+SG+LL+GRTKDS ++LQWLF 
Sbjct: 200  LPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETSGILLLGRTKDSASHLQWLFT 259

Query: 752  GVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAYP 573
             +N AK+SCK WNDACEATY +YWALVIG+P+EKEG+I APLSKVLLNDGKTER+ILA  
Sbjct: 260  NINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILANH 319

Query: 572  SSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWFA 393
            SS+EP Q+A+TE+RVLGP INGCSW+ELRP T RKHQLR+HCAEALGTPIVGDYKYGWF 
Sbjct: 320  SSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFV 379

Query: 392  HQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQKV 213
            H +WKQMP++DIEPT+GKPYKLRRP+GLDVQKGSVLSKVPLLHLHCRE+VLPNI+KF  V
Sbjct: 380  HSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLHV 439

Query: 212  LDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            L+  SE  +  L+ +P++LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 440  LNNSSEELHSSLNQQPEVLRFVATMPSHMRISWNLMSSYLV 480


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
            gi|557538602|gb|ESR49646.1| hypothetical protein
            CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  708 bits (1827), Expect = 0.0
 Identities = 352/476 (73%), Positives = 404/476 (84%), Gaps = 7/476 (1%)
 Frame = -3

Query: 1496 MMRKKVLHRCVFLGARNYSRIRPPPPACGAQVIRVSNN-IAKLGLPKEGPKPRQLLSLPP 1320
            MM KK          R+YSRI PP PA    VIRVS   +A LG PK GPKPRQLLSLPP
Sbjct: 1    MMWKKQAEFIWLSSIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPP 56

Query: 1319 FPAHPLPGKEG---THVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEG 1149
            FP H LPGK      HVTA+SW+KYYF +++   IQSHFNKGLVQMEC N+ +SFV ++G
Sbjct: 57   FPGHNLPGKHWGRQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFV-EQG 115

Query: 1148 QIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYK 969
            Q+K +RKIK +EVME G R+F+PVS+VE RIS+R+DTIPSGTL PNADEI YL+RLV Y+
Sbjct: 116  QMKPIRKIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYR 175

Query: 968  DSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 789
            DSAI+VLNKPPK+P+KG+LPVHNS+D LAAAALSYDY+EGPKLVHRLDRESSGLLLMGRT
Sbjct: 176  DSAILVLNKPPKVPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRT 235

Query: 788  KDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLN 609
            K+SV+ L WLF  VN +K+  K WNDACEA Y +YWALVIGSP+EK+G+I APLSKVLL+
Sbjct: 236  KESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLD 295

Query: 608  DGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGT 429
            DGKTER+ILA  S LE SQ+A+TEYRVLGPMINGCSWIELRP T RKHQLR+HCAEALGT
Sbjct: 296  DGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGT 355

Query: 428  PIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 249
            PIVGDYKYGWF H++WKQMP+VDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE
Sbjct: 356  PIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 415

Query: 248  VVLPNISKFQKVLDQQSEYKYPELSTK---PDILRFVASMPSHMKISWNLMSSYLV 90
            +VLPNI+KF+ VL+Q+S+  +P LS+K   PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 416  LVLPNIAKFRNVLNQKSDNLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
            sinensis]
          Length = 471

 Score =  705 bits (1819), Expect = 0.0
 Identities = 353/476 (74%), Positives = 402/476 (84%), Gaps = 7/476 (1%)
 Frame = -3

Query: 1496 MMRKKVLHRCVFLGARNYSRIRPPPPACGAQVIRVSNN-IAKLGLPKEGPKPRQLLSLPP 1320
            MM KK          R+YSRI PP PA    VIRVS   +A LG PK GPKPRQLLSLPP
Sbjct: 1    MMWKKQAEFIWLSSIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPP 56

Query: 1319 FPAHPLPGKEGT---HVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEG 1149
            FP H LPGK      HVTA+SW+KYYF +++   IQSHFNKGLVQMEC N+ +SFV ++G
Sbjct: 57   FPGHNLPGKHWGRQGHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFV-EQG 115

Query: 1148 QIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYK 969
            Q+K +RKIK +EVME G R+F+PVS+VE RIS+R+DTIPSGTL PNADEI YL+RLV Y+
Sbjct: 116  QMKPIRKIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYR 175

Query: 968  DSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 789
            DSAI+VLNKPPK+P+KGNLPVHNS+D LAAAALSYD +EGPKLVHRLDRESSGLLLMGRT
Sbjct: 176  DSAILVLNKPPKVPLKGNLPVHNSMDALAAAALSYDNNEGPKLVHRLDRESSGLLLMGRT 235

Query: 788  KDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLN 609
            K+SV+ L WLF  VN +K+  K WNDACEA Y +YWALVIGSPREK+G+I APLSKVLL+
Sbjct: 236  KESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLD 295

Query: 608  DGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGT 429
            DGKTER+ILA  S LE SQ+A+TEYRVLGPMINGCSWIELRP T RKHQLR+HCAEALGT
Sbjct: 296  DGKTERIILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGT 355

Query: 428  PIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 249
            PIVGDYKYGWF H++WKQMP+VDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE
Sbjct: 356  PIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 415

Query: 248  VVLPNISKFQKVLDQQSEYKYPELSTK---PDILRFVASMPSHMKISWNLMSSYLV 90
            +VLPNI+KF  VL+Q+S+  +P LS+K   PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 416  LVLPNIAKFINVLNQKSDNLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
            gi|550341843|gb|ERP62872.1| hypothetical protein
            POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  704 bits (1817), Expect = 0.0
 Identities = 349/473 (73%), Positives = 401/473 (84%), Gaps = 4/473 (0%)
 Frame = -3

Query: 1496 MMRKKVLHRCVFLGARNYSRIRPPPPACGAQVIRVS-NNIAKLGLPKEGPKPRQLLSLPP 1320
            M R++VL   V  G R YSR+ P       QV+RV+  N+AKLG PKEGPKPRQLLSLPP
Sbjct: 1    MWRQRVL---VSSGVRLYSRVAP-------QVVRVTAKNVAKLGSPKEGPKPRQLLSLPP 50

Query: 1319 FPAHPLPGKEGT---HVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEG 1149
            FP  PLPGK+     HVTAISW+KYYF +I+   IQSHFNK LVQ+EC +  +S V  EG
Sbjct: 51   FPGFPLPGKKSLNACHVTAISWVKYYFDEIQDSVIQSHFNKSLVQIECPSSSDS-VEMEG 109

Query: 1148 QIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYK 969
              K MRKIKPS+VME G R+ +PVSV ET IS+RFDTIPSGTLYPNADEI YLQRLV YK
Sbjct: 110  LGKPMRKIKPSDVMEVGARIHIPVSVAETAISKRFDTIPSGTLYPNADEIEYLQRLVKYK 169

Query: 968  DSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 789
            DSA++VLNKPPK+PVKGN+P+HNS+D LAAAALSY YDEGPKLVHRLDRESSGLLLMGRT
Sbjct: 170  DSALLVLNKPPKVPVKGNMPIHNSMDALAAAALSYGYDEGPKLVHRLDRESSGLLLMGRT 229

Query: 788  KDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLN 609
            K+S+A+LQ LF  +N A++ C  WNDACEATY +YWALVIGSP++KEGLI A LSKVLL+
Sbjct: 230  KESIAHLQLLFSYINKAQSKCHAWNDACEATYQRYWALVIGSPKDKEGLISARLSKVLLD 289

Query: 608  DGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGT 429
            DGKTERV+LA  SSLEPS+ A+TEYRVLGP INGCSWIELRP TSRKHQLR+HCAEALGT
Sbjct: 290  DGKTERVVLAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGT 349

Query: 428  PIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 249
            PIVGDYKYGWF H++WKQMP+VDIEP+SGKPYKLR P+G+D+QKGSVL+KVPLLHLHCRE
Sbjct: 350  PIVGDYKYGWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDIQKGSVLAKVPLLHLHCRE 409

Query: 248  VVLPNISKFQKVLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            +VLPNI+KF  VLD +SE  +P LST+PD+LRFVASMPSHMKISWNLMSS+LV
Sbjct: 410  LVLPNIAKFLDVLDGKSENVHPALSTRPDLLRFVASMPSHMKISWNLMSSFLV 462


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  702 bits (1813), Expect = 0.0
 Identities = 337/454 (74%), Positives = 389/454 (85%)
 Frame = -3

Query: 1451 RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKEGTHVTA 1272
            R YSRIRPP  A    VIRVSNN+A+LG PKEGPKPRQLLSLPPFP  PLPGK+   VTA
Sbjct: 7    RQYSRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGLPLPGKKSERVTA 66

Query: 1271 ISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPSEVMEAGVR 1092
            I+W+KYYF ++    IQSHFNK LVQMEC N  +    ++ ++K MRKIKP+EVM  G R
Sbjct: 67   ITWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPNEVMVEGTR 126

Query: 1091 VFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPPKLPVKGNL 912
            ++VPVSV E+RIS+RFD IPSGTL+PNADEIAYLQRL    DSAI+VLNKPP+LPVKG+L
Sbjct: 127  IYVPVSVAESRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNKPPRLPVKGHL 182

Query: 911  PVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLFGGVNVAKT 732
            PVHNS+D LAAAALSYDY EGPKLVHRLDR+SSGLLLMGRTK+S+++L+WLF  +     
Sbjct: 183  PVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEWLFSNI----- 237

Query: 731  SCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAYPSSLEPSQ 552
              K WNDACEA Y KYWALVIGSP+EKEG+ICAPLSKVLLNDGKTERVILA+ +  + SQ
Sbjct: 238  --KAWNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQ 295

Query: 551  KAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWFAHQKWKQM 372
            +AITEYRVLGPMINGCSW+ELRP TSRKHQLR+HCAEALGTPIVGDYKYGWF H++WKQM
Sbjct: 296  EAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQM 355

Query: 371  PQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQKVLDQQSEY 192
            PQV+IEPT+GKPYKLRRP+GLDVQKGSV+SKVPLLHL CRE+VLPNI+KF +V D++S+ 
Sbjct: 356  PQVNIEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSQN 415

Query: 191  KYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            + P L +KPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 416  QDPALESKPDLLRFVARMPSHMKISWNLMSSYLV 449


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  702 bits (1812), Expect = 0.0
 Identities = 338/454 (74%), Positives = 387/454 (85%)
 Frame = -3

Query: 1451 RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKEGTHVTA 1272
            R YSRIRPP  A    VIRVSNN+A+LG PKEGPKPRQLLSLPPFP  PLPGK    VTA
Sbjct: 7    RQYSRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGLPLPGKNSERVTA 66

Query: 1271 ISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPSEVMEAGVR 1092
            ISW+KYYF ++    IQSHFNK LVQMEC N  +    ++ ++K MRKIKP+EVM  G R
Sbjct: 67   ISWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPNEVMVEGTR 126

Query: 1091 VFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPPKLPVKGNL 912
            ++VPVSV E+RIS+RFD IPSGTL+PNADEIAYLQRL    DSAI+VLNKPP+LPVKG+L
Sbjct: 127  IYVPVSVAESRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNKPPRLPVKGHL 182

Query: 911  PVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLFGGVNVAKT 732
            PVHNS+D LAAAALSYDY EGPKLVHRLDR+SSGLLLMGRTK+S+++L+WLF  +     
Sbjct: 183  PVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEWLFSNI----- 237

Query: 731  SCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAYPSSLEPSQ 552
              K WNDACEA Y KYWALVIGSP+EKEG+ICAPLSKVLLNDGKTERVILA+ +  + SQ
Sbjct: 238  --KAWNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQ 295

Query: 551  KAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWFAHQKWKQM 372
            +AITEYRVLGPMINGCSW+ELRP TSRKHQLR+HCAEALGTPIVGDYKYGW  H++WKQM
Sbjct: 296  EAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWLVHKRWKQM 355

Query: 371  PQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQKVLDQQSEY 192
            PQV+IEPT+GKPYKLRRP+GLDVQKGSV+SKVPLLHL CRE+VLPNI+KF +V D++SE 
Sbjct: 356  PQVNIEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSEN 415

Query: 191  KYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            + P L +KPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 416  QDPALESKPDLLRFVARMPSHMKISWNLMSSYLV 449


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  692 bits (1786), Expect = 0.0
 Identities = 340/473 (71%), Positives = 388/473 (82%), Gaps = 7/473 (1%)
 Frame = -3

Query: 1487 KKVLHRCVFLGARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAH 1308
            ++ + R + L  R YSRI PPPPA    +IRVSNNIA+LG PKEGPK RQLLSLPPFP +
Sbjct: 2    QRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY 61

Query: 1307 PLPGK-------EGTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEG 1149
            PLPGK       E THVTAI W+KYYF +I+   IQSHF KGLVQ+EC  L    + ++G
Sbjct: 62   PLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGG--LDEKG 119

Query: 1148 QIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYK 969
             +K MRKI+  E+ME G R+ +PVSV E +++RRFDTIPSGTLYPNADEI YLQRLV YK
Sbjct: 120  NLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYK 179

Query: 968  DSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 789
            DSAIIVLNKPPKLPVKG LPVHNS+D LA AALSYDYD+GPKLVHRLDRESSG+LLMGRT
Sbjct: 180  DSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRT 239

Query: 788  KDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLN 609
            K+SV +LQWLF  +  AK +CK W +AC ATY KYWALVIG PRE+EG+I APLSKVLL+
Sbjct: 240  KESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLD 299

Query: 608  DGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGT 429
            DGKTERVILA  +S+E SQ+AITEYRVLGP INGCSWIEL P TSRKHQLRIHCAEALGT
Sbjct: 300  DGKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGT 359

Query: 428  PIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 249
            PIVGDYKYGWF H++WKQMP+VD+EP SG+PYKLRRP+GLDVQKGSVLSKVPLLHLHCRE
Sbjct: 360  PIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRE 419

Query: 248  VVLPNISKFQKVLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            +VLPNI+KF  V   +   + P  S   D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 420  LVLPNIAKFLNVFYGKGPNR-PVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  692 bits (1785), Expect = 0.0
 Identities = 339/473 (71%), Positives = 388/473 (82%), Gaps = 7/473 (1%)
 Frame = -3

Query: 1487 KKVLHRCVFLGARNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAH 1308
            ++ + R + L  R YSRI PPPPA    +IRVSNNIA+LG PKEGPK RQLLSLPPFP +
Sbjct: 2    QRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY 61

Query: 1307 PLPGK-------EGTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEG 1149
            PLPGK       E THVTAI W+KYYF +I+   IQSHF KGLVQ+EC  L    + ++G
Sbjct: 62   PLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGG--LDEKG 119

Query: 1148 QIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYK 969
             +K MRKI+  E+ME G R+ +PVSV E +++RRFDTIPSGTLYPNADEI YLQRLV YK
Sbjct: 120  NLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYK 179

Query: 968  DSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRT 789
            DSAIIVLNKPPKLPVKG LPVHNS+D LA AALSYDYD+GPKLVHRLDRESSG+LLMGRT
Sbjct: 180  DSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRT 239

Query: 788  KDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLN 609
            K+SV +LQWLF  +  AK +CK W +AC ATY KYWALVIG PRE+EG+I APLSKVLL+
Sbjct: 240  KESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLD 299

Query: 608  DGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGT 429
            DGKTERV+LA  +S+E SQ+AITEYRVLGP INGCSWIEL P TSRKHQLRIHCAEALGT
Sbjct: 300  DGKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGT 359

Query: 428  PIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRE 249
            PIVGDYKYGWF H++WKQMP+VD+EP SG+PYKLRRP+GLDVQKGSVLSKVPLLHLHCRE
Sbjct: 360  PIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRE 419

Query: 248  VVLPNISKFQKVLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            +VLPNI+KF  V   +   + P  S   D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 420  LVLPNIAKFLNVFYGKGPNR-PVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Mimulus guttatus]
          Length = 460

 Score =  688 bits (1776), Expect = 0.0
 Identities = 337/456 (73%), Positives = 376/456 (82%), Gaps = 5/456 (1%)
 Frame = -3

Query: 1442 SRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAHPLPGKEGT---HVTA 1272
            S+IRPPPPA    V+RVSNNIA LG PKEGPKPRQLLSLPPFP +PLPG+  T   HVTA
Sbjct: 5    SKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGNPLPGRNSTSVEHVTA 64

Query: 1271 ISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQIKSMRKIKPSEVMEAGVR 1092
            ISW+KYYF D+    IQ HFNKGLV+MEC N         GQ  S RKIKPSE++E G R
Sbjct: 65   ISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRGQTMSTRKIKPSEIVEEGDR 124

Query: 1091 VFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDSAIIVLNKPPKLPVKGNL 912
            V+VPVSV E ++S+RFD IPSGTL+PNADEI YLQRLV YKDSAI+VLNKPPKLPVKGNL
Sbjct: 125  VYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSAILVLNKPPKLPVKGNL 184

Query: 911  PVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKDSVAYLQWLFGGVNVAKT 732
            PVHNS+D LAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTK+S++YL WLF  V  A +
Sbjct: 185  PVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHWLFSDVRKAAS 244

Query: 731  SCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDGKTERVILAYPSSLEPSQ 552
              K W+DAC+A Y +YWALVIG P +KEG+ICAPL+KVLLNDGKTE VIL++ S LE SQ
Sbjct: 245  FSKEWSDACDAMYQRYWALVIGVPNQKEGVICAPLTKVLLNDGKTEMVILSHNSGLEASQ 304

Query: 551  KAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPIVGDYKYGWFAHQKWKQM 372
            +AIT YRVLGPMINGCSWIEL P T RKHQLR+HCAEALGTPIVGDYKYGWF H KWKQM
Sbjct: 305  EAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGTPIVGDYKYGWFVHSKWKQM 364

Query: 371  PQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVVLPNISKFQKVLDQQS-E 195
            P++D EPT+G+PYK+RRP+GLDVQKGSVLSKVPLLHLH RE+VLPNI KF ++    S  
Sbjct: 365  PRLDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSREMVLPNIEKFIELHKHMSGN 424

Query: 194  YKY-PELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            Y   PEL  KPDILRFV  MP HMKISWNLMSSYLV
Sbjct: 425  YNVDPELCAKPDILRFVVPMPKHMKISWNLMSSYLV 460


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
            vesca subsp. vesca]
          Length = 469

 Score =  687 bits (1773), Expect = 0.0
 Identities = 344/478 (71%), Positives = 395/478 (82%), Gaps = 10/478 (2%)
 Frame = -3

Query: 1493 MRKKVLHRC-VFLGARNYSRIRPPPPACGAQ--VIRVSNNIAKLGLPKEGPKPRQLLSLP 1323
            MR+  +  C V L  R YS   PPPPA  A   +IRVSN++AKLG PK GPKPRQLLSLP
Sbjct: 1    MRRTTIRLCHVSLSTRQYSSTSPPPPASAAPPPLIRVSNHVAKLGPPKAGPKPRQLLSLP 60

Query: 1322 PFPA-HPLPGKEG------THVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESF 1164
            PFPA   LPGK+       +HVTA+SW++YYF +I   AI+SHFNKGLVQMEC    ES 
Sbjct: 61   PFPAGRHLPGKKSYHDGAVSHVTAVSWLRYYFHEIDDAAIRSHFNKGLVQMEC----ESS 116

Query: 1163 VGKEGQIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQR 984
            +GK      MRKI+PSEVME G RV+V VS+ E+++SRRFD IPS TLYPNADEI YLQR
Sbjct: 117  IGKH-----MRKIRPSEVMEEGARVYVAVSIAESKVSRRFDCIPSETLYPNADEIDYLQR 171

Query: 983  LVMYKDSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLL 804
            LV YKDSAIIVLNKPPKLPVKGN+PVHNS+D LAAAALSYDYDEGPKLVHRLDRESSG+L
Sbjct: 172  LVKYKDSAIIVLNKPPKLPVKGNVPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGIL 231

Query: 803  LMGRTKDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLS 624
            LMGRTK+S+  LQ L+  +NV K+SC+ WNDAC A   +YWALVIGSP+EKEGLICAPL+
Sbjct: 232  LMGRTKESLYLLQSLYTDINVGKSSCRAWNDACRAKCQRYWALVIGSPKEKEGLICAPLT 291

Query: 623  KVLLNDGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCA 444
            KVLL+DGKTERVILA+ S LE SQ A+T+YRVLGP INGCSWIEL+P TSRKHQLR+HCA
Sbjct: 292  KVLLDDGKTERVILAHQSGLEASQPALTQYRVLGPTINGCSWIELQPLTSRKHQLRVHCA 351

Query: 443  EALGTPIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLH 264
            EALGTPIVGDYKYGWF H++WKQMP +DIEP +G  YKLRRP GLDVQKGSV+SKVPLLH
Sbjct: 352  EALGTPIVGDYKYGWFVHRRWKQMPHIDIEPATGLQYKLRRPAGLDVQKGSVVSKVPLLH 411

Query: 263  LHCREVVLPNISKFQKVLDQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            LHCRE+VLPNI+KF  +LDQ+ + +Y   S+KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 412  LHCRELVLPNIAKFLCLLDQKLDNRYTVDSSKPDVLRFVASMPTHMKISWNLMSSYLV 469


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
            gi|557086377|gb|ESQ27229.1| hypothetical protein
            EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  675 bits (1741), Expect = 0.0
 Identities = 330/472 (69%), Positives = 394/472 (83%), Gaps = 8/472 (1%)
 Frame = -3

Query: 1481 VLHRCVFLGA--RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLPPFPAH 1308
            V  R V+L A  R YSR+ PPP    + VIRV+NNIA+LG PK+GP PRQL+SLPPFP H
Sbjct: 11   VSFRQVYLAAVTRRYSRVAPPP----STVIRVTNNIAQLGPPKKGPLPRQLMSLPPFPGH 66

Query: 1307 PLPGK-----EGTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDESFVGKEGQI 1143
            PLPGK     E  HVTAISW+KYY  +I   AIQSHF KGLVQME R   ++   K+  +
Sbjct: 67   PLPGKNAGVDEDGHVTAISWVKYYLEEIHDKAIQSHFTKGLVQMEFRGRRDASREKQDGV 126

Query: 1142 KSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYLQRLVMYKDS 963
            + ++K+K +EVM+ G ++++PVS+ ETRIS+R+DTIPSGTLYPNADEIAYLQRLV +KDS
Sbjct: 127  RPIKKVKHNEVMQIGDKIWLPVSIAETRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDS 186

Query: 962  AIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKD 783
            AIIVLNKPPKLPVKGN+P+HNS+D LAAAALS+  DEGP+L+HRLDRE+SGLL+MGRTK+
Sbjct: 187  AIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGKDEGPRLLHRLDRETSGLLVMGRTKE 246

Query: 782  SVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAPLSKVLLNDG 603
            S+ +L  +F       + CK WN ACEA Y +YWALVIGSP++KEG+I AP+SKVLL+DG
Sbjct: 247  SIDHLHSVFSDFKGRDSRCKAWNKACEAMYQQYWALVIGSPKDKEGVISAPISKVLLDDG 306

Query: 602  KTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIHCAEALGTPI 423
            KT+RV+LA  S  E SQ+AITEYRVLGPMINGCSW+ELRP TSRKHQLR+HCAEALGTPI
Sbjct: 307  KTDRVVLARGSGFEASQEAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPI 366

Query: 422  VGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCREVV 243
            VGDYKYGWF H+KWKQMPQVDIEPTSGKPYKLRRP+GLD+QKGSVLSKVPLLHLHCRE+V
Sbjct: 367  VGDYKYGWFVHKKWKQMPQVDIEPTSGKPYKLRRPEGLDIQKGSVLSKVPLLHLHCREMV 426

Query: 242  LPNISKFQKVL-DQQSEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYLV 90
            LPNI+KF  VL +Q+ +  +P + +KPD+LRFVASMPSHMKISWN+MSSYLV
Sbjct: 427  LPNIAKFLHVLNNQEIDSLHPGIISKPDLLRFVASMPSHMKISWNIMSSYLV 478


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
            gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
            pseudouridine synthase 3, mitochondrial; AltName:
            Full=RNA pseudouridylate synthase 3; AltName:
            Full=RNA-uridine isomerase 3; Flags: Precursor
            gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
            thaliana] gi|56790228|gb|AAW30031.1| At1g78910
            [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
            pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  674 bits (1740), Expect = 0.0
 Identities = 335/482 (69%), Positives = 390/482 (80%), Gaps = 13/482 (2%)
 Frame = -3

Query: 1496 MMRKKVLHRCVFLGA--RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLP 1323
            M + K   R ++L    R YSR+ PPP    + VIRV+NN+A LG PK+GP PRQL+SLP
Sbjct: 1    MWKAKTCFRQIYLTVLIRRYSRVAPPP----SSVIRVTNNVAHLGPPKQGPLPRQLISLP 56

Query: 1322 PFPAHPLPGKE----------GTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLD 1173
            PFP HPLPGK           G HVTAISW+KYYF +I   AIQ+HF KGLVQME R   
Sbjct: 57   PFPGHPLPGKNAGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRR 116

Query: 1172 ESFVGKEGQIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAY 993
            ++   KE     MRKIK +EVM+ G ++++PVS+ E RIS+R+DTIPSGTLYPNADEIAY
Sbjct: 117  DASREKEDGAIPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAY 176

Query: 992  LQRLVMYKDSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESS 813
            LQRLV +KDSAIIVLNKPPKLPVKGN+P+HNS+D LAAAALS+  DEGP+LVHRLDRE+S
Sbjct: 177  LQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETS 236

Query: 812  GLLLMGRTKDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICA 633
            GLL+MGRTK+S+ YL  +F       +SCK WN ACEA Y +YWALVIGSP+EKEGLI A
Sbjct: 237  GLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISA 296

Query: 632  PLSKVLLNDGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRI 453
            PLSKVLL+DGKT+RV+LA  S  E SQ AITEY+VLGP INGCSW+ELRP TSRKHQLR+
Sbjct: 297  PLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRV 356

Query: 452  HCAEALGTPIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVP 273
            HCAEALGTPIVGDYKYGWF H++WKQMPQVDIEPT+GKPYKLRRP+GLDVQKGSVLSKVP
Sbjct: 357  HCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVP 416

Query: 272  LLHLHCREVVLPNISKFQKVLDQQ-SEYKYPELSTKPDILRFVASMPSHMKISWNLMSSY 96
            LLHLHCRE+VLPNI+KF  V++QQ +E  +  +  KPD+LRFVASMPSHMKISWNLMSSY
Sbjct: 417  LLHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSY 476

Query: 95   LV 90
            LV
Sbjct: 477  LV 478


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
            lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
            ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  672 bits (1733), Expect = 0.0
 Identities = 335/481 (69%), Positives = 390/481 (81%), Gaps = 12/481 (2%)
 Frame = -3

Query: 1496 MMRKKVLHRCVFLGA--RNYSRIRPPPPACGAQVIRVSNNIAKLGLPKEGPKPRQLLSLP 1323
            M + K   R +FLG   R YSR+ PPP    + V+RV+NNIA LG PK+GP PRQL+SLP
Sbjct: 1    MWKAKTCFRQIFLGVVTRRYSRVAPPP----SSVLRVTNNIAHLGPPKQGPLPRQLISLP 56

Query: 1322 PFPAHPLPGK---------EGTHVTAISWIKYYFSDIRSLAIQSHFNKGLVQMECRNLDE 1170
            PFP +PLPGK         +  HVTAISW+K+YF +I   AIQ+HF KGLVQME R   +
Sbjct: 57   PFPGYPLPGKNAGVDGDEGDSGHVTAISWVKFYFEEIHDKAIQTHFTKGLVQMEFRGRRD 116

Query: 1169 SFVGKEGQIKSMRKIKPSEVMEAGVRVFVPVSVVETRISRRFDTIPSGTLYPNADEIAYL 990
            +    E     MRKIK +EVME G ++++PVS+ E RIS+R+DTIPSGTLYPNADEIAYL
Sbjct: 117  ASRENEDGAIPMRKIKHNEVMEIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYL 176

Query: 989  QRLVMYKDSAIIVLNKPPKLPVKGNLPVHNSLDVLAAAALSYDYDEGPKLVHRLDRESSG 810
            QRLV +KDSAIIVLNKPPKLPVKGN+P+HNS+D LAAAALS+  DEGP+LVHRLDRE+SG
Sbjct: 177  QRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGKDEGPRLVHRLDRETSG 236

Query: 809  LLLMGRTKDSVAYLQWLFGGVNVAKTSCKVWNDACEATYHKYWALVIGSPREKEGLICAP 630
            LL+MGR+K+S+ YL  +F       +SCK WN ACEA Y +YWALVIGSP+EKEGLI AP
Sbjct: 237  LLVMGRSKESIHYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAP 296

Query: 629  LSKVLLNDGKTERVILAYPSSLEPSQKAITEYRVLGPMINGCSWIELRPHTSRKHQLRIH 450
            LSKVLL+DGKT+RV+LA  S  E SQ+AITEYRVLGPMINGCSW+ELRP TSRKHQLR+H
Sbjct: 297  LSKVLLDDGKTDRVVLAQGSGFEASQEAITEYRVLGPMINGCSWLELRPITSRKHQLRVH 356

Query: 449  CAEALGTPIVGDYKYGWFAHQKWKQMPQVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPL 270
            CAEALGT IVGDYKYGWF H++WKQMPQVDIEPT+GKPYKLRRP+GLDVQKGSVLSKVPL
Sbjct: 357  CAEALGTSIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 416

Query: 269  LHLHCREVVLPNISKFQKVLDQQ-SEYKYPELSTKPDILRFVASMPSHMKISWNLMSSYL 93
            LHLHCRE+VLPNI+KF  VL+QQ +E     +  KPD+LRFVASMPSHMKISWNLMSSYL
Sbjct: 417  LHLHCREMVLPNIAKFLHVLNQQETEPLRTGIIDKPDLLRFVASMPSHMKISWNLMSSYL 476

Query: 92   V 90
            V
Sbjct: 477  V 477