BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00021610
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN88405.1| polyprotein, partial [Strawberry latent ringspot ...    68   1e-09
gb|ADN88403.1| polyprotein, partial [Strawberry latent ringspot ...    68   1e-09
gb|ADN88404.1| polyprotein, partial [Strawberry latent ringspot ...    66   4e-09
gb|ADN88406.1| polyprotein, partial [Strawberry latent ringspot ...    66   6e-09
gb|ADN88402.1| polyprotein, partial [Strawberry latent ringspot ...    66   6e-09
ref|YP_227376.1| small coat protein [Strawberry latent ringspot ...    65   7e-09
ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot...    65   7e-09
gb|AAY56484.1| unknown [Strawberry latent ringspot virus]              61   1e-07

>gb|ADN88405.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
           L VRDVSLWVEP+I YRH +GGFP+  P P PA  Y++ENTF VG
Sbjct: 668 LGVRDVSLWVEPNISYRHAVGGFPILKPTPPPAIDYYYENTFPVG 712


>gb|ADN88403.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
           L VRDVSLWVEP+I YRH +GGFP+  P P PA  Y++ENTF VG
Sbjct: 668 LGVRDVSLWVEPNISYRHAVGGFPILKPTPPPAIDYYYENTFPVG 712


>gb|ADN88404.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
           L VRDVSLWVEP+I +RH +GGFP+  P P+P+  Y++ENTF VG
Sbjct: 668 LGVRDVSLWVEPNISFRHAVGGFPILKPTPAPSIDYYYENTFPVG 712


>gb|ADN88406.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
           L VRD+SLWVEP+I +RH +GGFP+  P P+P+  Y++ENTF VG
Sbjct: 668 LGVRDISLWVEPNISFRHAVGGFPILKPTPAPSIDYYYENTFPVG 712


>gb|ADN88402.1| polyprotein, partial [Strawberry latent ringspot virus]
          Length = 712

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
           L +RDVSLWVEP+I +RH +GGFP+  P P+P+  Y++ENTF VG
Sbjct: 668 LGIRDVSLWVEPNISFRHAVGGFPILKPTPAPSIDYYYENTFPVG 712


>ref|YP_227376.1| small coat protein [Strawberry latent ringspot virus]
          Length = 235

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
           L VRD+SLWVEP + +RH +GGFP+  P P+PA  Y++ENTF VG
Sbjct: 191 LGVRDISLWVEPKVTFRHAVGGFPILKPTPAPAIDYYYENTFPVG 235


>ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot virus]
            gi|58040999|gb|AAW63129.1| 109 kDa polyprotein
            [Strawberry latent ringspot virus]
          Length = 989

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +2

Query: 2    LHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFIVG 136
            L VRD+SLWVEP + +RH +GGFP+  P P+PA  Y++ENTF VG
Sbjct: 945  LGVRDISLWVEPKVTFRHAVGGFPILKPTPAPAIDYYYENTFPVG 989


>gb|AAY56484.1| unknown [Strawberry latent ringspot virus]
          Length = 173

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +2

Query: 146 FSS*AFLSKNIPGPDGH*SGKPVNSVCHYHGSTW--LFSFSV 265
           F S  FL +NIPGPDGH  GKPVN VCHYHG+TW  +F++S+
Sbjct: 132 FFSYVFLKENIPGPDGHLLGKPVNFVCHYHGTTWFRVFNYSL 173