BLASTX nr result
ID: Paeonia23_contig00021452
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00021452
(1754 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 575 e-161
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 556 e-155
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 522 e-145
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 509 e-141
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 497 e-138
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 486 e-134
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 486 e-134
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 486 e-134
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no... 477 e-132
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas... 467 e-129
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas... 461 e-127
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 453 e-124
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 453 e-124
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 449 e-123
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 449 e-123
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su... 448 e-123
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 448 e-123
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 439 e-120
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 439 e-120
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 439 e-120
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 575 bits (1483), Expect = e-161
Identities = 278/459 (60%), Positives = 347/459 (75%), Gaps = 1/459 (0%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFHVC+EI K+R LK HSIID+LYMKCN AR ESK+NLP LQITSK+C +D M+KE++D
Sbjct: 1027 HFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVD-MEKEDSDC 1085
Query: 183 ICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKSTGLFG 362
CITV+ N K SC+Q +T RDLVIPF LG V+KG +KKVDILWND G
Sbjct: 1086 FCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPDSDVLKSSSG 1145
Query: 363 ELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFVK 542
LYL+V++S DC + W L++ C+QIMDMIDW+RSHPDNI+ +F YGID W +F+
Sbjct: 1146 RLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLN 1205
Query: 543 NLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSNP 722
+LKSAISDIGKT+LPEHLLL A+ LS+TGEFVGLNAKGMA QKE TS+SSP MQ CFS+P
Sbjct: 1206 SLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSP 1265
Query: 723 SACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLGS 902
+CFIKA K AV DNL GSLDALAWG PS+G+ G F+++YS KG+ELA+P D+Y LLGS
Sbjct: 1266 GSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGS 1325
Query: 903 QISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYISLNDV 1079
Q S EQ ++ +P +C + KCG + +Y GDS KG K+ E K++ R+++SLND+
Sbjct: 1326 QTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDI 1385
Query: 1080 QNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKHPTS 1259
Q LS K IL+KYP+NHQL+E DK+TL++ L HPRRDEKIG G Q IKV YH K+ +
Sbjct: 1386 QKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNT 1445
Query: 1260 TCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 1376
CF +VRTDGT EDFSYHKCV G LE+I PR+ +SY+S+
Sbjct: 1446 RCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1484
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 556 bits (1432), Expect = e-155
Identities = 275/459 (59%), Positives = 345/459 (75%), Gaps = 1/459 (0%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFHVC+EI K+R LK HSIID+LYMKCN AR ESK+NLP LQITSK+C +D M+KE++D
Sbjct: 896 HFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVD-MEKEDSDC 954
Query: 183 ICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKSTGLFG 362
CITV+ N K SC+Q +T RDLVIPF LG V+KG IK D+L KS+ G
Sbjct: 955 FCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKG-CCIKNSDVL--------KSSS--G 1003
Query: 363 ELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFVK 542
LYL+V++S DC + W L++ C+QIMDMIDW+RSHPDNI+ +F YGID W +F+
Sbjct: 1004 RLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLN 1063
Query: 543 NLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSNP 722
+LKSAISDIGKT+LPEHLLL A+ LS+TGEFVGLNAKGMA QKE TS+SSP MQ CFS+P
Sbjct: 1064 SLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSP 1123
Query: 723 SACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLGS 902
+CFIKA K AV DNL GSLDALAWG PS+G+ G F+++YS KG+ELA+P D+Y LLGS
Sbjct: 1124 GSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGS 1183
Query: 903 QISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYISLNDV 1079
Q S EQ ++ +P +C + KCG + +Y GDS KG K+ E K++ R+++SLND+
Sbjct: 1184 QTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDI 1243
Query: 1080 QNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKHPTS 1259
Q LS K IL+KYP+NHQL+E DK+TL++ L HPRRDEKIG G Q IKV YH K+ +
Sbjct: 1244 QKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNT 1303
Query: 1260 TCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 1376
CF +VRTDGT EDFSYHKCV G LE+I PR+ +SY+S+
Sbjct: 1304 RCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1342
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 522 bits (1344), Expect = e-145
Identities = 267/463 (57%), Positives = 337/463 (72%), Gaps = 5/463 (1%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS--KECSMDEMQKENN 176
HFHVCK+ +KRR+LKV SIIDSL+M C A+ K++LP +QITS + CS +M E+
Sbjct: 1016 HFHVCKDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHIDMPNED- 1074
Query: 177 DMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-T 350
D CITVT E K+S ++ + RD+VIP+ L VIKGF IKKVDILW DR V K
Sbjct: 1075 DTFCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRLKVSKPHK 1134
Query: 351 GLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWT 530
GELYL+VF+S D TK+W L+N+C+QIMDMIDW RSHPDNIN + AYGID W
Sbjct: 1135 SSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWK 1194
Query: 531 FFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQAC 710
FF+ NLKSAISD GKTIL EHLL+ AN LS+TGEFVGLN+KG+ Q+E VSSP MQAC
Sbjct: 1195 FFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQREHAYVSSPFMQAC 1254
Query: 711 FSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYS 890
FSNPSA F+KAAK+ D+LQG++DALAWG P +GT G F+++YS K LA+P+DVY
Sbjct: 1255 FSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLAEPVDVYK 1314
Query: 891 LLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYIS 1067
LLGS ISSQ+Q VEF++P + + +K G + GDS + K E ++I R ++
Sbjct: 1315 LLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELKKIETKRRSIWRELLT 1374
Query: 1068 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 1247
L+D+Q LS +NIL KYP++H+L+E D +TL++ L HPRRDEKIG G QEIKVGYHP+
Sbjct: 1375 LDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEIKVGYHPE 1434
Query: 1248 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 1376
H + CF +VRTDGTI DFSYHKCV+G LE+IAP + KSY+SK
Sbjct: 1435 HANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSYKSK 1477
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 509 bits (1311), Expect = e-141
Identities = 255/460 (55%), Positives = 328/460 (71%), Gaps = 2/460 (0%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFH+CKEIV++R+LKVHS++DSLY +CN AR E K+ L +L ITSK CS + ++D
Sbjct: 899 HFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAAQTCNGDDDT 958
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDR-RGVQKSTGL 356
CITVT EN KNS Q + ARDLVIPF LGTV+KGF +KKVDILWND R +K G
Sbjct: 959 FCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESKKIHGS 1018
Query: 357 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 536
GELYL+V MS R ++W+ L++NC+QIMD+IDW RSHPDN++ AYGID W +F
Sbjct: 1019 SGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDNVHDYCIAYGIDAGWKYF 1078
Query: 537 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 716
+ NL++A +DIGK ILP+HL+L A+ LS+TGEFVGLNAKG+A QK TSVSSP +QACFS
Sbjct: 1079 LNNLETAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIAQQKGHTSVSSPFVQACFS 1138
Query: 717 NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 896
+P ACFIKAAK VVD L GS++ALAWG+TP GT F+++YS++G L+KPL+ Y LL
Sbjct: 1139 SPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILYSKEGLNLSKPLNPYDLL 1198
Query: 897 GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRNYISLND 1076
GSQISS + F+ + + LDKC V + + K+ +F IR Y+++ND
Sbjct: 1199 GSQISSSRENA-FETSKAWNNTLDKCDV--------TSIGLEKSESVFKSVIRKYLTIND 1249
Query: 1077 VQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKHPT 1256
+Q + T K ILRKY +N L E DKS L + L HP + +K+G GVQ+IKVG HPKH
Sbjct: 1250 IQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSGVQDIKVGQHPKHEN 1309
Query: 1257 STCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 1376
+ CF +VR D T EDFSYHKCV+G LE++AP + KSY SK
Sbjct: 1310 ARCFMLVRIDRTEEDFSYHKCVLGALEIVAPERAKSYRSK 1349
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 497 bits (1280), Expect = e-138
Identities = 245/460 (53%), Positives = 332/460 (72%), Gaps = 2/460 (0%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFHVCKEI+K+R+LK++S+I SL M+C+ R E ++NLP+LQI +++C + + E+ D
Sbjct: 1005 HFHVCKEILKKRRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTEDGDT 1064
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKSTGLF 359
+C+TVT EN KNS LQ + +DL+I F LGTVI+GF+ I +VDI WNDR V K
Sbjct: 1065 VCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPKPRCSH 1124
Query: 360 GELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFV 539
GELYL+V MS + ++ W L+NNC+ IMD+IDW RSHPDN +++ AYGID W +F+
Sbjct: 1125 GELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1183
Query: 540 KNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSN 719
+L+SA D+GKTI EHLLL +N LS+TGEFVGLN KG+ HQ+E V +P MQACFS+
Sbjct: 1184 NSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSS 1243
Query: 720 PSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLG 899
P AC IKAAK+ + DNL GSLDALAWG PSLGT G F+++YS KG+EL KP+DVY+LLG
Sbjct: 1244 PGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLG 1303
Query: 900 SQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYISLND 1076
Q + ++Q + + + + + +K + + G S +KG K + K+I R +++LND
Sbjct: 1304 GQSTCEKQNTKIESLDK-NTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTLND 1362
Query: 1077 VQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKHPT 1256
+Q LS + IL KY +N +LNE DKSTL++ L HP RDEKIGVG Q+IKVG H K+
Sbjct: 1363 IQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQN 1422
Query: 1257 STCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 1376
+ CF ++R+DGT EDFSYHKCV+G LE+IAP +VK Y+SK
Sbjct: 1423 TRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSK 1462
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 486 bits (1252), Expect = e-134
Identities = 252/467 (53%), Positives = 327/467 (70%), Gaps = 5/467 (1%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFHV KEI+KR LK HSIIDSLY +C AR E K+++P + I++K+CS MQKE ND
Sbjct: 979 HFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDA 1038
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TGL 356
C+TV EN K + + ET + V+PF L TV+KGF IKKVDILW D++ KS
Sbjct: 1039 FCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDS 1098
Query: 357 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 536
FGELYL+V MS C T +W+AL+N+C QIMDMIDW RSHPDNI + AYGID FF
Sbjct: 1099 FGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFF 1158
Query: 537 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 716
+ NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA FS
Sbjct: 1159 LTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFS 1218
Query: 717 NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 896
NP A FIKAAK+ VDNLQGS+DAL WG PS+GT G F+++YS +G L+KP+DVY+LL
Sbjct: 1219 NPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLL 1278
Query: 897 GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYIS 1067
+ +SS +Q + + + + DKCG K +GD KG N + I +R +
Sbjct: 1279 STPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWT 1333
Query: 1068 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 1247
NDV LS+ K IL KY + +L+E+DK+T++ L HPRR+EK+G+ +I+V YHP+
Sbjct: 1334 YNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPE 1393
Query: 1248 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 1388
H S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1394 HQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1440
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 486 bits (1252), Expect = e-134
Identities = 252/467 (53%), Positives = 327/467 (70%), Gaps = 5/467 (1%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFHV KEI+KR LK HSIIDSLY +C AR E K+++P + I++K+CS MQKE ND
Sbjct: 1017 HFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDA 1076
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TGL 356
C+TV EN K + + ET + V+PF L TV+KGF IKKVDILW D++ KS
Sbjct: 1077 FCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDS 1136
Query: 357 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 536
FGELYL+V MS C T +W+AL+N+C QIMDMIDW RSHPDNI + AYGID FF
Sbjct: 1137 FGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFF 1196
Query: 537 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 716
+ NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA FS
Sbjct: 1197 LTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFS 1256
Query: 717 NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 896
NP A FIKAAK+ VDNLQGS+DAL WG PS+GT G F+++YS +G L+KP+DVY+LL
Sbjct: 1257 NPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLL 1316
Query: 897 GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYIS 1067
+ +SS +Q + + + + DKCG K +GD KG N + I +R +
Sbjct: 1317 STPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWT 1371
Query: 1068 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 1247
NDV LS+ K IL KY + +L+E+DK+T++ L HPRR+EK+G+ +I+V YHP+
Sbjct: 1372 YNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPE 1431
Query: 1248 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 1388
H S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1432 HQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1478
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 486 bits (1252), Expect = e-134
Identities = 252/467 (53%), Positives = 327/467 (70%), Gaps = 5/467 (1%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFHV KEI+KR LK HSIIDSLY +C AR E K+++P + I++K+CS MQKE ND
Sbjct: 979 HFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDA 1038
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TGL 356
C+TV EN K + + ET + V+PF L TV+KGF IKKVDILW D++ KS
Sbjct: 1039 FCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDS 1098
Query: 357 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 536
FGELYL+V MS C T +W+AL+N+C QIMDMIDW RSHPDNI + AYGID FF
Sbjct: 1099 FGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFF 1158
Query: 537 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 716
+ NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA FS
Sbjct: 1159 LTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFS 1218
Query: 717 NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 896
NP A FIKAAK+ VDNLQGS+DAL WG PS+GT G F+++YS +G L+KP+DVY+LL
Sbjct: 1219 NPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLL 1278
Query: 897 GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYIS 1067
+ +SS +Q + + + + DKCG K +GD KG N + I +R +
Sbjct: 1279 STPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWT 1333
Query: 1068 LNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPK 1247
NDV LS+ K IL KY + +L+E+DK+T++ L HPRR+EK+G+ +I+V YHP+
Sbjct: 1334 YNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPE 1393
Query: 1248 HPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 1388
H S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1394 HQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1440
>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
Length = 1410
Score = 477 bits (1227), Expect = e-132
Identities = 243/463 (52%), Positives = 320/463 (69%), Gaps = 1/463 (0%)
Frame = +3
Query: 21 EIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDMICITVT 200
EI++RR+L V S+I+SLY + + +R SKV LP L+I SK+CS+ ++E+ND CITV+
Sbjct: 942 EILRRRRLTVQSVINSLYERHSTSRKGSKVKLPNLRIRSKDCSVPATREEDNDTCCITVS 1001
Query: 201 FENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKST-GLFGELYLK 377
E KNS +Q T +DL+IPF L T++KGF I+KVDILW+DR K+T GELYLK
Sbjct: 1002 IECSKNSVIQLITVQDLLIPFLLETIVKGFREIEKVDILWSDRSNTSKATRDSSGELYLK 1061
Query: 378 VFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFVKNLKSA 557
V MS D W+ L+N+C++IMD+IDW RSHP+N+N + YGID W FF+ NL+SA
Sbjct: 1062 VSMSGDSGVKSYWSTLMNDCLRIMDLIDWSRSHPENVNEFCSVYGIDSGWKFFLNNLESA 1121
Query: 558 ISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSNPSACFI 737
+SD+GKTILPEHLLL AN LS TG FVGL KG+A Q+E SV++P QACFSNP+ACFI
Sbjct: 1122 VSDVGKTILPEHLLLVANTLSVTGNFVGLTPKGLARQREHASVATPFSQACFSNPAACFI 1181
Query: 738 KAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLGSQISSQ 917
KAAK+ V D L G+LDALAWG+ P LGT G FELV+S KG+E+ KP++VY +L + IS
Sbjct: 1182 KAAKAEVTDGLHGTLDALAWGNIPPLGTGGQFELVFSGKGHEVDKPINVYDMLATGISPD 1241
Query: 918 EQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRNYISLNDVQNLSHT 1097
Q V + P++ + K G L Y S +G K I I+ L+D+ LS+
Sbjct: 1242 VQGVN-ETPDAKNHRSVKFGA--LLLYDKSVSQGLKKLGISKDRIKKLFKLDDIWILSNA 1298
Query: 1098 WKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKHPTSTCFFVV 1277
IL KYP+N L+ +DKSTL++ L HPR DEKIG G Q+IKV YHPKH +S CF +V
Sbjct: 1299 LAKILNKYPINQSLDHKDKSTLMIALYFHPRIDEKIGTGFQDIKVAYHPKHQSSRCFVLV 1358
Query: 1278 RTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVR 1406
R DGT+EDFSY KCV+G LE+I P+ + Y+S ++ + VR
Sbjct: 1359 RADGTVEDFSYRKCVLGALEIIDPQAAEIYKSNMRYDGNDQVR 1401
>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031868|gb|ESW30447.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 467 bits (1202), Expect = e-129
Identities = 244/488 (50%), Positives = 328/488 (67%), Gaps = 9/488 (1%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFH+ KEI+ RRKLKVHSIID LY + E KV L+I+SK+CS+D KE D+
Sbjct: 987 HFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSKKCSVDSTAKEGEDI 1046
Query: 183 I--------CITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDR-RG 335
CITVT + +Q + RDL+IPFFLGT IKGF IKKVDILWN++ +G
Sbjct: 1047 CIDKEDSDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSKG 1106
Query: 336 VQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGI 515
G GELYL+V +++ + + W LVN+C +IM +IDW RSHPDNIN + +AYGI
Sbjct: 1107 TNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGI 1166
Query: 516 DIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSP 695
D+AW ++ K+L SAISD GK+ILP+HL L AN +S++GEFVGLNAKGMA Q++ SVSSP
Sbjct: 1167 DVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHASVSSP 1226
Query: 696 LMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKP 875
+QACFSNP FIKAAKS + DNLQGSLDALAWG+ PS+GT+G F+++YSEKG+E+ K
Sbjct: 1227 FVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKA 1286
Query: 876 LDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIR 1055
+DVY LL + + F N+ S KCG + + G + +G++ + +R
Sbjct: 1287 VDVYKLLEASFDKPNNKIGFHAHNNSS---GKCGSEFRHKNGYAFKEGKQ----WKNILR 1339
Query: 1056 NYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVG 1235
N++++ND+Q L+ + IL KY ++ L+E D+ST+L L HPRR EK+G+G Q+IKVG
Sbjct: 1340 NFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKVG 1399
Query: 1236 YHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVREKK 1415
+HPK S CF +VRTDGT+EDFSY KC++ LE++ P+ SK+QK KK
Sbjct: 1400 WHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKM-----SKIQK--------KK 1446
Query: 1416 WDWEVDSQ 1439
W D+Q
Sbjct: 1447 WSARDDAQ 1454
>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031869|gb|ESW30448.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 461 bits (1187), Expect = e-127
Identities = 243/489 (49%), Positives = 328/489 (67%), Gaps = 10/489 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEMQKENND 179
HFH+ KEI+ RRKLKVHSIID LY + E KV L+I+S ++CS+D KE D
Sbjct: 987 HFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSNRKCSVDSTAKEGED 1046
Query: 180 MI--------CITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDR-R 332
+ CITVT + +Q + RDL+IPFFLGT IKGF IKKVDILWN++ +
Sbjct: 1047 ICIDKEDSDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSK 1106
Query: 333 GVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYG 512
G G GELYL+V +++ + + W LVN+C +IM +IDW RSHPDNIN + +AYG
Sbjct: 1107 GTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYG 1166
Query: 513 IDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSS 692
ID+AW ++ K+L SAISD GK+ILP+HL L AN +S++GEFVGLNAKGMA Q++ SVSS
Sbjct: 1167 IDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHASVSS 1226
Query: 693 PLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAK 872
P +QACFSNP FIKAAKS + DNLQGSLDALAWG+ PS+GT+G F+++YSEKG+E+ K
Sbjct: 1227 PFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDK 1286
Query: 873 PLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI 1052
+DVY LL + + F N+ S KCG + + G + +G++ + +
Sbjct: 1287 AVDVYKLLEASFDKPNNKIGFHAHNNSS---GKCGSEFRHKNGYAFKEGKQ----WKNIL 1339
Query: 1053 RNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKV 1232
RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HPRR EK+G+G Q+IKV
Sbjct: 1340 RNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKV 1399
Query: 1233 GYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVREK 1412
G+HPK S CF +VRTDGT+EDFSY KC++ LE++ P+ SK+QK K
Sbjct: 1400 GWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKM-----SKIQK--------K 1446
Query: 1413 KWDWEVDSQ 1439
KW D+Q
Sbjct: 1447 KWSARDDAQ 1455
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 453 bits (1166), Expect = e-124
Identities = 246/490 (50%), Positives = 322/490 (65%), Gaps = 11/490 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFH+ KE V RR L+VHSIIDSLY + + R SKV LP L+I++K+CS+ M KE +
Sbjct: 996 HFHLDKENVTRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTKKCSVHYMAKEGGET 1055
Query: 183 I---------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWND-R 329
CITVT EN NS +Q + R+++IPF L T IKG IKKVDILW D
Sbjct: 1056 SVDKEIDGEDCITVTIVENYMNS-VQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLS 1114
Query: 330 RGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAY 509
+G + G GELYL+V MS+D R W AL+N+C +IM MIDW RSHPDNI+ +A+
Sbjct: 1115 KGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAF 1174
Query: 510 GIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVS 689
GID W F+ NL SA SD G +ILP+HL L AN LS++GEFVGLN+KGMA Q+ SVS
Sbjct: 1175 GIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHASVS 1234
Query: 690 SPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELA 869
SP +QACFSNP + F+KAAKS VVDNLQG+LD LAWG+ S+GT+G F+++YSEK ELA
Sbjct: 1235 SPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELA 1294
Query: 870 KPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKA 1049
K +DVY LL + +Q + N+ S DKC + + G K K ++
Sbjct: 1295 KSVDVYDLLETSFDQLDQEINTSQSNNYSS--DKCNSQFRHKKGRYAPKEPKQWK---SV 1349
Query: 1050 IRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIK 1229
IRN+++ ND+Q L+ + IL KYP++ L+ERDK T++ L HPRR+EK+G G Q IK
Sbjct: 1350 IRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIK 1409
Query: 1230 VGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVRE 1409
VG+HPK S CFF++RTDGT+EDFSY KC++G L+++ P K SK+QK
Sbjct: 1410 VGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEK-----SKIQK-------- 1456
Query: 1410 KKWDWEVDSQ 1439
KKW D++
Sbjct: 1457 KKWSGHDDTE 1466
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 453 bits (1165), Expect = e-124
Identities = 242/488 (49%), Positives = 322/488 (65%), Gaps = 10/488 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S++CS D M KE D
Sbjct: 991 HFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCSADSMVKEGEDT 1050
Query: 183 I--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRG 335
CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDILWN++
Sbjct: 1051 SIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSK 1109
Query: 336 VQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYG 512
V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN +AYG
Sbjct: 1110 VTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYG 1169
Query: 513 IDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSS 692
ID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q++ SVSS
Sbjct: 1170 IDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSS 1229
Query: 693 PLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAK 872
P +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSEKG+++AK
Sbjct: 1230 PFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAK 1289
Query: 873 PLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI 1052
+DVY LL + + + S DKCG + + G + LK K ++ L
Sbjct: 1290 SVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQWKTIL--- 1342
Query: 1053 RNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKV 1232
RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+G Q+IKV
Sbjct: 1343 RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKV 1402
Query: 1233 GYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVREK 1412
G+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K ++EK
Sbjct: 1403 GWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK-------------IQEK 1449
Query: 1413 KWDWEVDS 1436
KW D+
Sbjct: 1450 KWSGHGDT 1457
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 449 bits (1156), Expect = e-123
Identities = 247/475 (52%), Positives = 322/475 (67%), Gaps = 17/475 (3%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEMQKENND 179
HFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M KE D
Sbjct: 905 HFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSNRKCSADSMAKEGED 964
Query: 180 MI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRR 332
CITVT EN KN +Q ++ RDLVIPF LGT IKGF +KKVD+LWN++
Sbjct: 965 TSIDKKEGDDCITVTIVENSKNP-IQLDSVRDLVIPFLLGTAIKGFLDVKKVDVLWNNQS 1023
Query: 333 GVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAY 509
V+ S G GELYL+V +S++ SR + W L+N C +IM +IDW RSHPDNIN +AY
Sbjct: 1024 KVKNSCNGFSGELYLRVTLSSEGSRGRFWGVLLNLCHKIMHIIDWTRSHPDNINHFSSAY 1083
Query: 510 GIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVS 689
GID W +F +L SA SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q++ SVS
Sbjct: 1084 GIDAGWQYFFNSLASATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVS 1143
Query: 690 SPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELA 869
SP +QACF+NP +CFIKAAKS V DNLQGSLDALAWG+ S+GT+G F+++YSEK +A
Sbjct: 1144 SPFVQACFANPGSCFIKAAKSGVTDNLQGSLDALAWGNCLSMGTSGMFDIIYSEK---VA 1200
Query: 870 KPLDVYSLLGSQISSQEQIVEFDIPNSCS------RMLDKCGVKPLYTYGDSPLKGRKNY 1031
K +VY LL + FD PN+ + DKCG + + G + LK K +
Sbjct: 1201 KSGNVYELLEA---------SFDKPNNKAGTHLHKYSSDKCGSEFRHKNGYA-LKEGKQW 1250
Query: 1032 EIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGV 1211
+ L RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HPR+ EK G+
Sbjct: 1251 KTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPRKSEKFGI 1307
Query: 1212 GVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 1376
G Q+IKVG+HPK+ S CF +VR DGT+EDFSY KC++G L+++ P+K K E K
Sbjct: 1308 GPQDIKVGWHPKYKDSRCFHIVRIDGTVEDFSYRKCILGALDIVDPKKSKIQEKK 1362
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 449 bits (1155), Expect = e-123
Identities = 246/491 (50%), Positives = 322/491 (65%), Gaps = 12/491 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQI-TSKECSMDEMQKENND 179
HFH+ KE V RR L+VHSIIDSLY + + R SKV LP L+I T+++CS+ M KE +
Sbjct: 996 HFHLDKENVTRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTNRKCSVHYMAKEGGE 1055
Query: 180 MI---------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWND- 326
CITVT EN NS +Q + R+++IPF L T IKG IKKVDILW D
Sbjct: 1056 TSVDKEIDGEDCITVTIVENYMNS-VQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDL 1114
Query: 327 RRGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAA 506
+G + G GELYL+V MS+D R W AL+N+C +IM MIDW RSHPDNI+ +A
Sbjct: 1115 SKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSA 1174
Query: 507 YGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSV 686
+GID W F+ NL SA SD G +ILP+HL L AN LS++GEFVGLN+KGMA Q+ SV
Sbjct: 1175 FGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHASV 1234
Query: 687 SSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYEL 866
SSP +QACFSNP + F+KAAKS VVDNLQG+LD LAWG+ S+GT+G F+++YSEK EL
Sbjct: 1235 SSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQEL 1294
Query: 867 AKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLK 1046
AK +DVY LL + +Q + N+ S DKC + + G K K ++
Sbjct: 1295 AKSVDVYDLLETSFDQLDQEINTSQSNNYSS--DKCNSQFRHKKGRYAPKEPKQWK---S 1349
Query: 1047 AIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEI 1226
IRN+++ ND+Q L+ + IL KYP++ L+ERDK T++ L HPRR+EK+G G Q I
Sbjct: 1350 VIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHI 1409
Query: 1227 KVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVR 1406
KVG+HPK S CFF++RTDGT+EDFSY KC++G L+++ P K SK+QK
Sbjct: 1410 KVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEK-----SKIQK------- 1457
Query: 1407 EKKWDWEVDSQ 1439
KKW D++
Sbjct: 1458 -KKWSGHDDTE 1467
>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
[Glycine max]
Length = 1381
Score = 448 bits (1153), Expect = e-123
Identities = 242/489 (49%), Positives = 322/489 (65%), Gaps = 11/489 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEMQKENND 179
HFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M KE D
Sbjct: 914 HFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGED 973
Query: 180 MI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRR 332
CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDILWN++
Sbjct: 974 TSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQS 1032
Query: 333 GVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAY 509
V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN +AY
Sbjct: 1033 KVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAY 1092
Query: 510 GIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVS 689
GID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q++ SVS
Sbjct: 1093 GIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVS 1152
Query: 690 SPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELA 869
SP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSEKG+++A
Sbjct: 1153 SPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVA 1212
Query: 870 KPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKA 1049
K +DVY LL + + + S DKCG + + G + LK K ++ L
Sbjct: 1213 KSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQWKTIL-- 1266
Query: 1050 IRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIK 1229
RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+G Q+IK
Sbjct: 1267 -RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIK 1325
Query: 1230 VGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVRE 1409
VG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K ++E
Sbjct: 1326 VGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK-------------IQE 1372
Query: 1410 KKWDWEVDS 1436
KKW D+
Sbjct: 1373 KKWSGHGDT 1381
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 448 bits (1153), Expect = e-123
Identities = 242/489 (49%), Positives = 322/489 (65%), Gaps = 11/489 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEMQKENND 179
HFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M KE D
Sbjct: 991 HFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGED 1050
Query: 180 MI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRR 332
CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDILWN++
Sbjct: 1051 TSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQS 1109
Query: 333 GVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAY 509
V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN +AY
Sbjct: 1110 KVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAY 1169
Query: 510 GIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVS 689
GID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q++ SVS
Sbjct: 1170 GIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVS 1229
Query: 690 SPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELA 869
SP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSEKG+++A
Sbjct: 1230 SPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVA 1289
Query: 870 KPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKA 1049
K +DVY LL + + + S DKCG + + G + LK K ++ L
Sbjct: 1290 KSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQWKTIL-- 1343
Query: 1050 IRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIK 1229
RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+G Q+IK
Sbjct: 1344 -RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIK 1402
Query: 1230 VGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVRE 1409
VG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K ++E
Sbjct: 1403 VGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK-------------IQE 1449
Query: 1410 KKWDWEVDS 1436
KKW D+
Sbjct: 1450 KKWSGHGDT 1458
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 439 bits (1129), Expect = e-120
Identities = 241/489 (49%), Positives = 319/489 (65%), Gaps = 11/489 (2%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEMQKENND 179
HFH+ KEIV RRKLKVHSIIDSLY + R +SKV L+I+S ++CS D M KE D
Sbjct: 991 HFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGED 1050
Query: 180 MI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRR 332
CI VT EN KN +Q ++ RDLVIPF LGT I+GF +KKVDILWN++
Sbjct: 1051 TSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQS 1109
Query: 333 GVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAY 509
V S G GELYL+V +S++ SR + W L+ C +IM +IDW RSH DNIN +AY
Sbjct: 1110 KVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAY 1169
Query: 510 GIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVS 689
GID W +F +L A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q++ SVS
Sbjct: 1170 GIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVS 1229
Query: 690 SPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELA 869
SP +QACF+NP +CFIKAAKS DNLQGSLD LAWG+ S+GT+G F+++YSEK +A
Sbjct: 1230 SPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEK---VA 1286
Query: 870 KPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKA 1049
K +DVY LL + + + S DKCG + + G + LK K ++ L
Sbjct: 1287 KSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQWKTIL-- 1340
Query: 1050 IRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIK 1229
RN++++ND+Q L+ + IL KY ++ L+E D+ST+L L HP + EK G+G Q+IK
Sbjct: 1341 -RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIK 1399
Query: 1230 VGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVRE 1409
VG+HPK+ S CF ++RTDGT+EDFSY KC++G L+++ P+K K ++E
Sbjct: 1400 VGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK-------------IQE 1446
Query: 1410 KKWDWEVDS 1436
KKW D+
Sbjct: 1447 KKWSGHGDT 1455
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 439 bits (1128), Expect = e-120
Identities = 229/457 (50%), Positives = 316/457 (69%), Gaps = 3/457 (0%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFH+ KE VK R+LK+ SI+D+L M+ A + +LP L IT K+CS+ E +KE ++
Sbjct: 771 HFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSE- 829
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKST-GL 356
ICITV+ E K+ +T RD+VIPF L TVIKGFS KKVDILW + KS+ G
Sbjct: 830 ICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGS 889
Query: 357 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 536
GELYL+VFMS C R K WNALV++C+QI D+IDW+RS+PD+++ + AYGID+AW +F
Sbjct: 890 TGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYF 949
Query: 537 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 716
+ L SA+S+ GK ILPEHL+L A+ L++TGEFV L+AKG+ Q++ V SP MQACFS
Sbjct: 950 LCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFS 1009
Query: 717 NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 896
NP F++AAK + DNLQGSL++LAWG TPS+GT F+++YS KGYE A+P+DVY+LL
Sbjct: 1010 NPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLL 1069
Query: 897 GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRNYISLND 1076
+ ++S V+ + M K + L D K K+ E + +R++IS ND
Sbjct: 1070 QNHVTSGTPKVKVTLDED-GGMDGKSLARRLDRLDDLNKKSCKS-EWSITKLRSFISFND 1127
Query: 1077 VQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGV-QEIKVGYHPKHP 1253
++ LS + K +L KY ++ +LNE DK ++ L+ HPRR+EKIG G QEIK+GYH ++
Sbjct: 1128 IKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYE 1187
Query: 1254 TSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKS 1364
S CF +VR+DG++EDFSY KC+ LELIAP+K K+
Sbjct: 1188 DSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKT 1224
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 439 bits (1128), Expect = e-120
Identities = 229/457 (50%), Positives = 316/457 (69%), Gaps = 3/457 (0%)
Frame = +3
Query: 3 HFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDM 182
HFH+ KE VK R+LK+ SI+D+L M+ A + +LP L IT K+CS+ E +KE ++
Sbjct: 984 HFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSE- 1042
Query: 183 ICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKST-GL 356
ICITV+ E K+ +T RD+VIPF L TVIKGFS KKVDILW + KS+ G
Sbjct: 1043 ICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGS 1102
Query: 357 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 536
GELYL+VFMS C R K WNALV++C+QI D+IDW+RS+PD+++ + AYGID+AW +F
Sbjct: 1103 TGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYF 1162
Query: 537 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 716
+ L SA+S+ GK ILPEHL+L A+ L++TGEFV L+AKG+ Q++ V SP MQACFS
Sbjct: 1163 LCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFS 1222
Query: 717 NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 896
NP F++AAK + DNLQGSL++LAWG TPS+GT F+++YS KGYE A+P+DVY+LL
Sbjct: 1223 NPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLL 1282
Query: 897 GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRNYISLND 1076
+ ++S V+ + M K + L D K K+ E + +R++IS ND
Sbjct: 1283 QNHVTSGTPKVKVTLDED-GGMDGKSLARRLDRLDDLNKKSCKS-EWSITKLRSFISFND 1340
Query: 1077 VQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGV-QEIKVGYHPKHP 1253
++ LS + K +L KY ++ +LNE DK ++ L+ HPRR+EKIG G QEIK+GYH ++
Sbjct: 1341 IKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYE 1400
Query: 1254 TSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKS 1364
S CF +VR+DG++EDFSY KC+ LELIAP+K K+
Sbjct: 1401 DSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKT 1437