BLASTX nr result
ID: Paeonia23_contig00019762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00019762
(755 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera] 437 e-120
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi... 435 e-120
ref|XP_006423034.1| hypothetical protein CICLE_v10030202mg [Citr... 426 e-117
ref|XP_006487095.1| PREDICTED: pentatricopeptide repeat-containi... 423 e-116
ref|XP_004245911.1| PREDICTED: pentatricopeptide repeat-containi... 420 e-115
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,... 420 e-115
ref|XP_007014264.1| Pentatricopeptide repeat-containing protein,... 419 e-115
ref|XP_006352878.1| PREDICTED: pentatricopeptide repeat-containi... 417 e-114
ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containi... 417 e-114
ref|XP_004301520.1| PREDICTED: pentatricopeptide repeat-containi... 415 e-113
ref|XP_004508428.1| PREDICTED: pentatricopeptide repeat-containi... 406 e-111
ref|XP_007141459.1| hypothetical protein PHAVU_008G197500g [Phas... 401 e-109
ref|XP_003518493.2| PREDICTED: pentatricopeptide repeat-containi... 401 e-109
ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ... 401 e-109
ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containi... 395 e-107
ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containi... 395 e-107
ref|XP_006380898.1| hypothetical protein POPTR_0006s01700g [Popu... 385 e-105
ref|XP_002866609.1| pentatricopeptide repeat-containing protein ... 382 e-104
ref|XP_006279545.1| hypothetical protein CARUB_v10028516mg [Caps... 382 e-104
ref|NP_201237.1| pentatricopeptide repeat-containing protein [Ar... 376 e-102
>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 437 bits (1125), Expect = e-120
Identities = 211/251 (84%), Positives = 228/251 (90%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPTSME+F+WAG QKGY H FDVYY+LIDKLG A EF ID LL+QMK+EGIV
Sbjct: 84 LLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIV 143
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRESLFILIMK+YGRA LPGQATRLLLDMRG YSCEPTFRSYNV LD+L+AG+CPKV PN
Sbjct: 144 FRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPN 203
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFYEML+KGISPTVYTF VVMKALCLVNEVDSAC+LL+DMT+HGCVPN+IVYQTLIHAL
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
KV RV+E LKLLEEM LMGC PDV+TFND IHGLCK RIHEAAKLVDRMLLRGFTPN+
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323
Query: 723 TYGVLMHALCR 755
TYGVLMH LCR
Sbjct: 324 TYGVLMHGLCR 334
Score = 108 bits (269), Expect = 3e-21
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
+G+ + Y VL+ L + + LL ++ +V +L I Y R L +
Sbjct: 316 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL---INGYVSRGRLD-E 371
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTF 413
A ++ + + C P +YN L+ G C K A + EM KG P V T+
Sbjct: 372 AKAVMHESMLSVGCGPDIFTYNT----LILGLCKKGYLVSARELMNEMQIKGCEPNVITY 427
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ C ++ A ++L +M+ G N++ Y LI AL K +V +AL + +M
Sbjct: 428 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 487
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC PD+ TFN +I GLCK N+ EA L MLL G N +TY L+HA R
Sbjct: 488 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 541
Score = 107 bits (266), Expect = 6e-21
Identities = 53/150 (35%), Positives = 83/150 (55%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A N+F +M +KG P ++TF ++ LC VN+ + A L +DM
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + N+I Y TLIHA + + EALKL+ +M GC D T+N +I LC+ I
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L + M+ +G PN ++ +L++ LCR
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCR 611
Score = 101 bits (252), Expect = 2e-19
Identities = 57/170 (33%), Positives = 89/170 (52%)
Frame = +3
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
+ R L++ CEP +Y + +D + A NV EM KG++ + ++
Sbjct: 407 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
ALC +V A ++ DM+ GC P+ + +LI L KVN+ +EAL L ++M L G
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ T+N +IH + + EA KLV+ ML RG + +TY L+ ALCR
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576
Score = 93.6 bits (231), Expect = 7e-17
Identities = 48/151 (31%), Positives = 78/151 (51%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + + A + +ML +G T+ ++KALC ++ +L DM
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
G PN+I LI+ L + + AL+ L +M G TPD+ T+N +I+GLCK R
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
EA L D++ + G P+A+TY L+ C+
Sbjct: 651 QEALNLFDKLQVEGICPDAITYNTLISWHCK 681
Score = 93.2 bits (230), Expect = 9e-17
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Frame = +3
Query: 81 SFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLL 260
+F Y V++D L V+ + +M +GI F ++MK A LL
Sbjct: 181 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 240
Query: 261 LDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCL 440
DM + C P Y + L + EML G P V TF + LC
Sbjct: 241 KDMT-RHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299
Query: 441 VNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLL-------------- 578
+ + A L+ M G PNS Y L+H L ++ +VDEA LL
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL 359
Query: 579 ------------------EEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRG 704
E M +GC PD+ T+N +I GLCK + A +L++ M ++G
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419
Query: 705 FTPNAVTYGVLMHALCR 755
PN +TY +L+ C+
Sbjct: 420 CEPNVITYTILIDRFCK 436
Score = 92.0 bits (227), Expect = 2e-16
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Frame = +3
Query: 60 AQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALP 239
+ KG + + LI L + +F L M EG++ + ++ + R
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545
Query: 240 GQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTF 413
+A +L+ DM RG C +YN + L + +F +M++KG++P +
Sbjct: 546 QEALKLVNDMLFRG---CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ LC + A LRDM G P+ + Y +LI+ L K R EAL L +++ +
Sbjct: 603 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLM 740
G PD T+N +I CK +A L+ R + GF PN VT+ +L+
Sbjct: 663 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 435 bits (1119), Expect = e-120
Identities = 210/251 (83%), Positives = 227/251 (90%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPTSME+F+WAG QKGY H FDVYY+LIDKLG A EF D LL+QMK+EGIV
Sbjct: 102 LLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIV 161
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRESLFILIMK+YGRA LPGQATRLLLDMRG YSCEPTFRSYNV LD+L+AG+CPKV PN
Sbjct: 162 FRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPN 221
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFYEML+KGISPTVYTF VVMKALCLVNEVDSAC+LL+DMT+HGCVPN+IVYQTLIHAL
Sbjct: 222 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
KV RV+E LKLLEEM LMGC PDV+TFND IHGLCK RIHEAAKLVDRMLLRGFTPN+
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341
Query: 723 TYGVLMHALCR 755
TYGVLMH LCR
Sbjct: 342 TYGVLMHGLCR 352
Score = 108 bits (269), Expect = 3e-21
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
+G+ + Y VL+ L + + LL ++ +V +L I Y R L +
Sbjct: 334 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL---INGYVSRGRLD-E 389
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTF 413
A ++ + + C P +YN L+ G C K A + EM KG P V T+
Sbjct: 390 AKAVMHESMLSVGCGPDIFTYNT----LILGLCKKGYLVSARELMNEMQIKGCEPNVITY 445
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ C ++ A ++L +M+ G N++ Y LI AL K +V +AL + +M
Sbjct: 446 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC PD+ TFN +I GLCK N+ EA L MLL G N +TY L+HA R
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 559
Score = 107 bits (266), Expect = 6e-21
Identities = 53/150 (35%), Positives = 83/150 (55%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A N+F +M +KG P ++TF ++ LC VN+ + A L +DM
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + N+I Y TLIHA + + EALKL+ +M GC D T+N +I LC+ I
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L + M+ +G PN ++ +L++ LCR
Sbjct: 600 KGLALFEDMMSKGLNPNNISCNILINGLCR 629
Score = 101 bits (252), Expect = 2e-19
Identities = 57/170 (33%), Positives = 89/170 (52%)
Frame = +3
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
+ R L++ CEP +Y + +D + A NV EM KG++ + ++
Sbjct: 425 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 484
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
ALC +V A ++ DM+ GC P+ + +LI L KVN+ +EAL L ++M L G
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ T+N +IH + + EA KLV+ ML RG + +TY L+ ALCR
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594
Score = 93.6 bits (231), Expect = 7e-17
Identities = 48/151 (31%), Positives = 78/151 (51%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + + A + +ML +G T+ ++KALC ++ +L DM
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
G PN+I LI+ L + + AL+ L +M G TPD+ T+N +I+GLCK R
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
EA L D++ + G P+A+TY L+ C+
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLISWHCK 699
Score = 92.8 bits (229), Expect = 1e-16
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Frame = +3
Query: 81 SFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLL 260
+F Y V++D L V+ + +M +GI F ++MK A LL
Sbjct: 199 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 258
Query: 261 LDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCL 440
DM + C P Y + L + EML G P V TF + LC
Sbjct: 259 KDMT-RHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317
Query: 441 VNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLL-------------- 578
+ + A L+ M G PNS Y L+H L ++ +VDEA LL
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL 377
Query: 579 ------------------EEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRG 704
E M +GC PD+ T+N +I GLCK + A +L++ M ++G
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437
Query: 705 FTPNAVTYGVLMHALCR 755
PN +TY +L+ C+
Sbjct: 438 CEPNVITYTILIDRFCK 454
Score = 92.0 bits (227), Expect = 2e-16
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Frame = +3
Query: 60 AQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALP 239
+ KG + + LI L + +F L M EG++ + ++ + R
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563
Query: 240 GQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTF 413
+A +L+ DM RG C +YN + L + +F +M++KG++P +
Sbjct: 564 QEALKLVNDMLFRG---CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 620
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ LC + A LRDM G P+ + Y +LI+ L K R EAL L +++ +
Sbjct: 621 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 680
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLM 740
G PD T+N +I CK +A L+ R + GF PN VT+ +L+
Sbjct: 681 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
>ref|XP_006423034.1| hypothetical protein CICLE_v10030202mg [Citrus clementina]
gi|557524968|gb|ESR36274.1| hypothetical protein
CICLE_v10030202mg [Citrus clementina]
Length = 728
Score = 426 bits (1094), Expect = e-117
Identities = 204/251 (81%), Positives = 225/251 (89%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLDV TSME+F WAG+Q+GY H+FDVYYV IDKLG +EF VID +L+QMKEEGI+
Sbjct: 87 LLRLPLDVDTSMELFTWAGSQEGYCHTFDVYYVFIDKLGANKEFKVIDSVLLQMKEEGII 146
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRESLFILIMKYYGR +PGQATRLLLDM+ Y C+PTFRSYNVALD+LVAG+C KVAPN
Sbjct: 147 FRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVALDVLVAGNCHKVAPN 206
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
+FY+ML+KGISPTVYTF VVMKALC+VNEVDSACSLLRDMTKHGCVPNS+VYQTLIHAL
Sbjct: 207 LFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALS 266
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV EAL LLEEM LMGCT DV TFNDVIHGLCK NRIHEAAKLVDRML+RGFTP+ +
Sbjct: 267 KSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDI 326
Query: 723 TYGVLMHALCR 755
TYGVLMH LCR
Sbjct: 327 TYGVLMHGLCR 337
Score = 108 bits (271), Expect = 2e-21
Identities = 80/261 (30%), Positives = 109/261 (41%), Gaps = 32/261 (12%)
Frame = +3
Query: 69 GYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQA 248
G + +F Y V +D L V L M +GI F ++MK A
Sbjct: 180 GCQPTFRSYNVALDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
Query: 249 TRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMK 428
LL DM + C P Y + L + A + EM+ G + V TF V+
Sbjct: 240 CSLLRDMT-KHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIH 298
Query: 429 ALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLL---------- 578
LC VN + A L+ M G P+ I Y L+H L + RVDEA LL
Sbjct: 299 GLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVL 358
Query: 579 ----------------------EEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRM 692
+ M +GC PDV TFN +IHGLCK R+ A +LV+ M
Sbjct: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCNPDVFTFNILIHGLCKQRRLGSALELVNAM 418
Query: 693 LLRGFTPNAVTYGVLMHALCR 755
++G PN VTY +L+ C+
Sbjct: 419 AVKGCEPNIVTYTILVDGFCK 439
Score = 103 bits (257), Expect = 6e-20
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Frame = +3
Query: 243 QATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLN----KGISPTVYT 410
+A + D + C P ++N IL+ G C + E++N KG P + T
Sbjct: 374 EAKAIFYDSMLSVGCNPDVFTFN----ILIHGLCKQRRLGSALELVNAMAVKGCEPNIVT 429
Query: 411 FAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMF 590
+ +++ C +++ A ++ +M G N++ Y LIHAL ++ EA+++ EM
Sbjct: 430 YTILVDGFCKEGQLEKANIIVNEMLSKGLSLNTVGYNCLIHALCSAGKILEAMEIFGEMP 489
Query: 591 LMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC D+ TFN +I GLCK + I EA L MLL G T N VTY L+HA R
Sbjct: 490 SKGCKRDIYTFNSIISGLCKGDHIEEALGLYQDMLLEGVTANTVTYNTLIHAFLR 544
Score = 95.1 bits (235), Expect = 2e-17
Identities = 47/150 (31%), Positives = 78/150 (52%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A +F EM +KG +YTF ++ LC + ++ A L +DM
Sbjct: 465 YNCLIHALCSAGKILEAMEIFGEMPSKGCKRDIYTFNSIISGLCKGDHIEEALGLYQDML 524
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G N++ Y TLIHA + + EA KL+ +M GC D T+N +I LC +
Sbjct: 525 LEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVD 584
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L + M+ +G P++++ +L++ LCR
Sbjct: 585 KGLGLFEEMMRKGIKPSSISCNILINGLCR 614
Score = 92.8 bits (229), Expect = 1e-16
Identities = 51/165 (30%), Positives = 85/165 (51%)
Frame = +3
Query: 258 LLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALC 437
L++ CEP +Y + +D + A + EML+KG+S + ++ ALC
Sbjct: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIVNEMLSKGLSLNTVGYNCLIHALC 473
Query: 438 LVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVD 617
++ A + +M GC + + ++I L K + ++EAL L ++M L G T +
Sbjct: 474 SAGKILEAMEIFGEMPSKGCKRDIYTFNSIISGLCKGDHIEEALGLYQDMLLEGVTANTV 533
Query: 618 TFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALC 752
T+N +IH + +HEA KLV+ ML RG + +TY L+ ALC
Sbjct: 534 TYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALC 578
Score = 89.0 bits (219), Expect = 2e-15
Identities = 49/146 (33%), Positives = 75/146 (51%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + A + +ML +G T+ ++KALC VD L +M
Sbjct: 534 TYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEM 593
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G P+SI LI+ L + + + AL+ L +M G TPD+ T+N +I+GLCK I
Sbjct: 594 MRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCI 653
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLM 740
EA L D++ G P+AVTY L+
Sbjct: 654 REALNLFDKLQAEGIYPDAVTYNTLI 679
Score = 87.8 bits (216), Expect = 4e-15
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Frame = +3
Query: 54 AGAQKGYRHSFDVYYVLID---KLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYG 224
A A KG + Y +L+D K G+ + N+I + +M +G+ + ++
Sbjct: 417 AMAVKGCEPNIVTYTILVDGFCKEGQLEKANII---VNEMLSKGLSLNTVGYNCLIHALC 473
Query: 225 RAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTV 404
A +A + +M C+ ++N + L G + A ++ +ML +G++
Sbjct: 474 SAGKILEAMEIFGEMPSK-GCKRDIYTFNSIISGLCKGDHIEEALGLYQDMLLEGVTANT 532
Query: 405 YTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEE 584
T+ ++ A + A L+ DM GC + I Y LI AL VD+ L L EE
Sbjct: 533 VTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEE 592
Query: 585 MFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
M G P + N +I+GLC+ + + A + + M+ RG TP+ VTY L++ LC+
Sbjct: 593 MMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCK 649
Score = 82.0 bits (201), Expect = 2e-13
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Frame = +3
Query: 33 SMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIM 212
+MEIF + KG + + +I L + L M EG+ + ++
Sbjct: 481 AMEIFGEMPS-KGCKRDIYTFNSIISGLCKGDHIEEALGLYQDMLLEGVTANTVTYNTLI 539
Query: 213 KYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNK 386
+ R +A +L+ DM RG E T YN + L +F EM+ K
Sbjct: 540 HAFLRRGSLHEAHKLVNDMLFRGCPLDEIT---YNGLIKALCNAGAVDKGLGLFEEMMRK 596
Query: 387 GISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEA 566
GI P+ + +++ LC + ++A LRDM G P+ + Y +LI+ L K+ + EA
Sbjct: 597 GIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIREA 656
Query: 567 LKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHA 746
L L +++ G PD T+N +I K +A ++ + + GF PN T+ +L+
Sbjct: 657 LNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRN 716
Query: 747 LCR 755
L +
Sbjct: 717 LVK 719
>ref|XP_006487095.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568867543|ref|XP_006487096.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 728
Score = 423 bits (1088), Expect = e-116
Identities = 204/251 (81%), Positives = 224/251 (89%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLDV TSMEIF WAG+Q+GY H+FDVYYVLIDKLG +EF VID +L+QMKEEGI+
Sbjct: 87 LLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGII 146
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
RESLFILIMKYYGR +PGQATRLLLDM+ Y C+PTFRSYNV LD+LVAG+C KVAPN
Sbjct: 147 CRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPN 206
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
+FY+ML+KGISPTVYTF VVMKALC+VNEVDSACSLLRDMTKHGCVPNS+VYQTLIHAL
Sbjct: 207 LFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALS 266
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV EAL LLEEM LMGCT DV TFNDVIHGLCK NRIHEAAKLVDRML+RGFTP+ +
Sbjct: 267 KSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDI 326
Query: 723 TYGVLMHALCR 755
TYGVLMH LCR
Sbjct: 327 TYGVLMHGLCR 337
Score = 108 bits (270), Expect = 2e-21
Identities = 80/261 (30%), Positives = 109/261 (41%), Gaps = 32/261 (12%)
Frame = +3
Query: 69 GYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQA 248
G + +F Y V++D L V L M +GI F ++MK A
Sbjct: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
Query: 249 TRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMK 428
LL DM + C P Y + L + A + EM+ G + V TF V+
Sbjct: 240 CSLLRDMT-KHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIH 298
Query: 429 ALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLL---------- 578
LC VN + A L+ M G P+ I Y L+H L + RVDEA LL
Sbjct: 299 GLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVL 358
Query: 579 ----------------------EEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRM 692
+ M +GC PDV TFN +IHGLCK R A +LV+ M
Sbjct: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
Query: 693 LLRGFTPNAVTYGVLMHALCR 755
++G PN VTY +L+ C+
Sbjct: 419 AVKGCEPNIVTYTILVDGFCK 439
Score = 104 bits (259), Expect = 4e-20
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Frame = +3
Query: 243 QATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLN----KGISPTVYT 410
+A + D + C P ++N IL+ G C + E++N KG P + T
Sbjct: 374 EAKAIFYDSMLSVGCIPDVFTFN----ILIHGLCKQRRFGSALELVNAMAVKGCEPNIVT 429
Query: 411 FAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMF 590
+ +++ C +++ A ++ +M G N++ Y LIHAL ++ EA+++ EM
Sbjct: 430 YTILVDGFCKEGQLEKANIIINEMLAKGLSLNTVGYNCLIHALCSAGKIIEAMEIFGEMP 489
Query: 591 LMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC D+ TFN +I GLCK +RI EA L MLL G T N VTY L+HA R
Sbjct: 490 SKGCKRDIYTFNSIISGLCKGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLR 544
Score = 94.7 bits (234), Expect = 3e-17
Identities = 47/150 (31%), Positives = 78/150 (52%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A +F EM +KG +YTF ++ LC + ++ A L +DM
Sbjct: 465 YNCLIHALCSAGKIIEAMEIFGEMPSKGCKRDIYTFNSIISGLCKGDRIEEALGLYQDML 524
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G N++ Y TLIHA + + EA KL+ +M GC D T+N +I LC +
Sbjct: 525 LEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVD 584
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L + M+ +G P++++ +L++ LCR
Sbjct: 585 KGLGLFEEMMRKGIKPSSISCNILINGLCR 614
Score = 94.4 bits (233), Expect = 4e-17
Identities = 52/165 (31%), Positives = 85/165 (51%)
Frame = +3
Query: 258 LLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALC 437
L++ CEP +Y + +D + A + EML KG+S + ++ ALC
Sbjct: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTVGYNCLIHALC 473
Query: 438 LVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVD 617
++ A + +M GC + + ++I L K +R++EAL L ++M L G T +
Sbjct: 474 SAGKIIEAMEIFGEMPSKGCKRDIYTFNSIISGLCKGDRIEEALGLYQDMLLEGVTANTV 533
Query: 618 TFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALC 752
T+N +IH + +HEA KLV+ ML RG + +TY L+ ALC
Sbjct: 534 TYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALC 578
Score = 89.0 bits (219), Expect = 2e-15
Identities = 49/146 (33%), Positives = 75/146 (51%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + A + +ML +G T+ ++KALC VD L +M
Sbjct: 534 TYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEM 593
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G P+SI LI+ L + + + AL+ L +M G TPD+ T+N +I+GLCK I
Sbjct: 594 MRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCI 653
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLM 740
EA L D++ G P+AVTY L+
Sbjct: 654 QEALNLFDKLQAEGIYPDAVTYNTLI 679
Score = 87.8 bits (216), Expect = 4e-15
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Frame = +3
Query: 54 AGAQKGYRHSFDVYYVLID---KLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYG 224
A A KG + Y +L+D K G+ + N+I + +M +G+ + ++
Sbjct: 417 AMAVKGCEPNIVTYTILVDGFCKEGQLEKANII---INEMLAKGLSLNTVGYNCLIHALC 473
Query: 225 RAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTV 404
A +A + +M C+ ++N + L G + A ++ +ML +G++
Sbjct: 474 SAGKIIEAMEIFGEMPSK-GCKRDIYTFNSIISGLCKGDRIEEALGLYQDMLLEGVTANT 532
Query: 405 YTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEE 584
T+ ++ A + A L+ DM GC + I Y LI AL VD+ L L EE
Sbjct: 533 VTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEE 592
Query: 585 MFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
M G P + N +I+GLC+ + + A + + M+ RG TP+ VTY L++ LC+
Sbjct: 593 MMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCK 649
Score = 82.8 bits (203), Expect = 1e-13
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Frame = +3
Query: 33 SMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIM 212
+MEIF + KG + + +I L + L M EG+ + ++
Sbjct: 481 AMEIFGEMPS-KGCKRDIYTFNSIISGLCKGDRIEEALGLYQDMLLEGVTANTVTYNTLI 539
Query: 213 KYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNK 386
+ R +A +L+ DM RG E T YN + L +F EM+ K
Sbjct: 540 HAFLRRGSLHEAHKLVNDMLFRGCPLDEIT---YNGLIKALCNAGAVDKGLGLFEEMMRK 596
Query: 387 GISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEA 566
GI P+ + +++ LC + ++A LRDM G P+ + Y +LI+ L K+ + EA
Sbjct: 597 GIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEA 656
Query: 567 LKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHA 746
L L +++ G PD T+N +I K +A ++ + + GF PN T+ +L+
Sbjct: 657 LNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRN 716
Query: 747 LCR 755
L +
Sbjct: 717 LVK 719
>ref|XP_004245911.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Solanum lycopersicum]
Length = 720
Score = 420 bits (1080), Expect = e-115
Identities = 197/251 (78%), Positives = 231/251 (92%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLDVPTSME+F+WAG+Q Y HSFDVY+ LIDKLG A+EF +IDRLL++MK+EG V
Sbjct: 78 LLALPLDVPTSMELFQWAGSQTSYCHSFDVYFTLIDKLGAAKEFKIIDRLLLRMKDEGTV 137
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFI+IM++YGRA LPGQATR+LLDM +SCEPTF+SYN ALDIL+AG+CPKVAPN
Sbjct: 138 FKESLFIMIMRHYGRAGLPGQATRILLDMWNTFSCEPTFKSYNQALDILLAGNCPKVAPN 197
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFYEML KGISP+V+TFA V++ALC+VNEVDSACSLLRDMTKHGCVPNS++YQ LIHAL
Sbjct: 198 VFYEMLGKGISPSVFTFARVIQALCIVNEVDSACSLLRDMTKHGCVPNSVIYQILIHALS 257
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV++ALKLLEEMFLMGC PDV+TFND+IHGLC+ +RIHEAAKLVDRMLLRGFTP+A+
Sbjct: 258 KSNRVNDALKLLEEMFLMGCMPDVNTFNDIIHGLCRADRIHEAAKLVDRMLLRGFTPDAI 317
Query: 723 TYGVLMHALCR 755
TYG+LMHALCR
Sbjct: 318 TYGILMHALCR 328
Score = 116 bits (290), Expect = 1e-23
Identities = 66/230 (28%), Positives = 111/230 (48%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KGY+ Y +LI L + + + +M +GI + ++ + +A +
Sbjct: 377 KGYQPDVYTYNILIRGLCKKGILSSAHEAVSEMSSQGIQPNAITYTTLIDGFSKAGRLQE 436
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
A L+ +M A S YN + L + A +F +M N G P ++TF ++
Sbjct: 437 AYDLVTEM-SAKSLSLNIMGYNSLISALSKQGMIQQALEIFGDMSNNGCKPDIFTFNALI 495
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
C ++++D A + RDM + G + N++ Y TLIHA + + EALKL+ +M GC
Sbjct: 496 LGFCKIDKMDEALGIYRDMFQEGVIVNTVTYNTLIHAFLRKGKTQEALKLVNDMLFRGCP 555
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
D T+N +I LC + A L + M+ +G PN VT +L++ CR
Sbjct: 556 LDEITYNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCR 605
Score = 96.3 bits (238), Expect = 1e-17
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 2/219 (0%)
Frame = +3
Query: 105 IDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDM--RGA 278
IDK+ EA + M +EG++ + ++ + R +A +L+ DM RG
Sbjct: 501 IDKMDEALG------IYRDMFQEGVIVNTVTYNTLIHAFLRKGKTQEALKLVNDMLFRGC 554
Query: 279 YSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDS 458
E T YN + L + A +F EM+ KG P T +++ C + +V +
Sbjct: 555 PLDEIT---YNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCRIGKVQN 611
Query: 459 ACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIH 638
A LRD+ + G P+ + Y +LI+ L R+ EA L E++ L G PD T+N +I
Sbjct: 612 ALEFLRDLIQRGLTPDIVTYNSLINGLCNNGRIREAQNLFEKLELEGVCPDTITYNTLIS 671
Query: 639 GLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
CK + +A L R + GF PN+VT+ +L+ R
Sbjct: 672 SYCKMRMLDDAYTLFTRGIAVGFIPNSVTWYILVRNFVR 710
Score = 91.3 bits (225), Expect = 3e-16
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KG S + +I L E + LL M + G V ++ +++ ++
Sbjct: 205 KGISPSVFTFARVIQALCIVNEVDSACSLLRDMTKHGCVPNSVIYQILIHALSKSNRVND 264
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
A +LL +M C P ++N + L A + ML +G +P T+ ++M
Sbjct: 265 ALKLLEEMF-LMGCMPDVNTFNDIIHGLCRADRIHEAAKLVDRMLLRGFTPDAITYGILM 323
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEE-MFLMGC 602
ALC VD A LL + N++++ TLI+ RVDEA +L E M + G
Sbjct: 324 HALCRTGRVDEAKVLLNKAPEQ----NNVLFNTLINGYVTNGRVDEAKTILNENMLIKGY 379
Query: 603 TPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLM 740
PDV T+N +I GLCK + A + V M +G PNA+TY L+
Sbjct: 380 QPDVYTYNILIRGLCKKGILSSAHEAVSEMSSQGIQPNAITYTTLI 425
Score = 82.0 bits (201), Expect = 2e-13
Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 35/162 (21%)
Frame = +3
Query: 375 MLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNR 554
ML KG P VYT+ ++++ LC + SA + +M+ G PN+I Y TLI K R
Sbjct: 374 MLIKGYQPDVYTYNILIRGLCKKGILSSAHEAVSEMSSQGIQPNAITYTTLIDGFSKAGR 433
Query: 555 VDEALKLLEEMFLM-----------------------------------GCTPDVDTFND 629
+ EA L+ EM GC PD+ TFN
Sbjct: 434 LQEAYDLVTEMSAKSLSLNIMGYNSLISALSKQGMIQQALEIFGDMSNNGCKPDIFTFNA 493
Query: 630 VIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+I G CK +++ EA + M G N VTY L+HA R
Sbjct: 494 LILGFCKIDKMDEALGIYRDMFQEGVIVNTVTYNTLIHAFLR 535
>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 774
Score = 420 bits (1080), Expect = e-115
Identities = 202/251 (80%), Positives = 226/251 (90%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLDV TSM IF+WAG+QKGY H+FDVY+VLIDKLG A+EF VID+LL+Q+KEEGI
Sbjct: 75 LLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIA 134
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRESLFI IMKYYGRA LPGQATR+LLDM+G Y CEPTF+SYNV LDILV+ +CP VA N
Sbjct: 135 FRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAAN 194
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFYEML+KG+ PTVYTF VVMKALC+VNEVD+ACSLLRDMTKHGCVPNS+VYQTLIHAL
Sbjct: 195 VFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALS 254
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K +RV+EALKLLEEMFLMGC PDVDTFNDVI+GLC+ NRIHE AKLVDRML RGFTPN +
Sbjct: 255 KRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDI 314
Query: 723 TYGVLMHALCR 755
TYGVLM+ LCR
Sbjct: 315 TYGVLMNGLCR 325
Score = 103 bits (256), Expect = 8e-20
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
Frame = +3
Query: 258 LLDMRGAYSCEPTFRSYNVALDILVA-GHCPKVAPNVFYEMLNKGISPTVYTFAVVMKAL 434
+L+ A E YNV L L G PK A ++ EM +KG P ++TF ++ L
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPK-ALDMLGEMSDKGCKPDIFTFNTLIFGL 495
Query: 435 CLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDV 614
C V+ + A +L RDM G + N++ Y TLIHA + + EALKL+ +M GC D
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555
Query: 615 DTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
T+N +I CK +A L D M+ + P+ ++ +L++ LCR
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCR 602
Score = 101 bits (252), Expect = 2e-19
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Frame = +3
Query: 198 FILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEM 377
F +++ Y ++ +A L D C P ++N L+ G C K +M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNT----LIHGLCKKGLMGSAVDM 402
Query: 378 LN----KGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYK 545
+N G +P + T+ ++ C N+++ A +L +M+ G N + Y L+ AL K
Sbjct: 403 VNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCK 462
Query: 546 VNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVT 725
+V +AL +L EM GC PD+ TFN +I GLCK +R +A L MLL G N VT
Sbjct: 463 NGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522
Query: 726 YGVLMHALCR 755
Y L+HA R
Sbjct: 523 YNTLIHAFLR 532
Score = 100 bits (249), Expect = 5e-19
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Frame = +3
Query: 96 YVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYG--RAALPGQATRLLLDM 269
YV +L EA F L +M + G R +F +G + L G A ++ DM
Sbjct: 354 YVKSGRLDEANAF-----LYDKMIKNGC--RPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 270 RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNE 449
A C P +Y LD + + A V EM KG + + V+++ALC +
Sbjct: 407 -SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 450 VDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFND 629
V A +L +M+ GC P+ + TLI L KV+R ++AL L +M L G + T+N
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525
Query: 630 VIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+IH + I EA KLV+ ML RG + +TY L+ A C+
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCK 567
Score = 99.8 bits (247), Expect = 9e-19
Identities = 75/257 (29%), Positives = 106/257 (41%), Gaps = 32/257 (12%)
Frame = +3
Query: 81 SFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLL 260
+F Y V++D L A +V + +M +G++ F ++MK A LL
Sbjct: 172 TFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLL 231
Query: 261 LDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCL 440
DM + C P Y + L A + EM G P V TF V+ LC
Sbjct: 232 RDMT-KHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 441 VNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLL-------------- 578
+N + L+ M G PN I Y L++ L +V +VDEA LL
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTIL 350
Query: 579 ------------------EEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRG 704
++M GC PDV TFN +IHGLCK + A +V+ M G
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410
Query: 705 FTPNAVTYGVLMHALCR 755
TPN +TY L+ C+
Sbjct: 411 CTPNLITYTTLLDGFCK 427
Score = 91.3 bits (225), Expect = 3e-16
Identities = 50/151 (33%), Positives = 80/151 (52%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + G + A + +ML +G T+ ++KA C + + A L +M
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ VP++I LI+ L +V +V AL+LL +M G PDV T+N +I+GLCK I
Sbjct: 582 VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
EA L +++ G P+A+TY L+ CR
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTLICWHCR 672
Score = 77.8 bits (190), Expect = 4e-12
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Frame = +3
Query: 171 EGIVFRESLFILIMKYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHC 344
+G++ + ++ + R +A +L+ DM RG E T YN +
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEIT---YNGLIKAFCKLGA 570
Query: 345 PKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQT 524
+ A +F EM+ K + P+ + +++ LC V +V +A LLRDM G P+ + Y +
Sbjct: 571 TEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNS 630
Query: 525 LIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRG 704
LI+ L K+ + EA L ++ G PD T+N +I C+ +A L+ R +
Sbjct: 631 LINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENA 690
Query: 705 FTPNAVTYGVLM 740
F PN VT+ +L+
Sbjct: 691 FIPNDVTWYILV 702
>ref|XP_007014264.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|590581139|ref|XP_007014265.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
gi|590581142|ref|XP_007014266.1| Pentatricopeptide
repeat-containing protein, putative isoform 1 [Theobroma
cacao] gi|508784627|gb|EOY31883.1| Pentatricopeptide
repeat-containing protein, putative isoform 1 [Theobroma
cacao] gi|508784628|gb|EOY31884.1| Pentatricopeptide
repeat-containing protein, putative isoform 1 [Theobroma
cacao] gi|508784629|gb|EOY31885.1| Pentatricopeptide
repeat-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 716
Score = 419 bits (1078), Expect = e-115
Identities = 201/251 (80%), Positives = 224/251 (89%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPTS+++F WAG+QKGY H+FDVYYVLIDKLG A+EF VID LL+QMKEEG+V
Sbjct: 71 LLELPLDVPTSLKLFHWAGSQKGYCHTFDVYYVLIDKLGAAKEFKVIDSLLMQMKEEGVV 130
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFILIMKYYG A PGQATRLLLD++ YSCEPT RS+NV LDILVAG+C KVAPN
Sbjct: 131 FKESLFILIMKYYGTAGFPGQATRLLLDIKSVYSCEPTVRSFNVVLDILVAGNCHKVAPN 190
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+MLNKGISP VYTF +VMKALC+VNEVDSACSLLRDMTKHGCVPNS+VY TLIHAL
Sbjct: 191 VFYDMLNKGISPNVYTFGLVMKALCIVNEVDSACSLLRDMTKHGCVPNSVVYNTLIHALS 250
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV+EALKLLEEMFLMGC+PDV TFNDVIHGLCK RIHEA K+VDRMLLRGF P+ +
Sbjct: 251 KSNRVNEALKLLEEMFLMGCSPDVQTFNDVIHGLCKLYRIHEAVKVVDRMLLRGFIPDEL 310
Query: 723 TYGVLMHALCR 755
TYG LM LC+
Sbjct: 311 TYGFLMQGLCK 321
Score = 105 bits (263), Expect = 1e-20
Identities = 51/150 (34%), Positives = 83/150 (55%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A + EM +KG P ++TF ++ LC V+++++A L RDM
Sbjct: 449 YNTLISALCRNGKIREAREMLGEMSSKGCKPDIFTFNSLIFGLCKVDQMEAAMGLYRDML 508
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + N + Y TLIHA + + EALKL+ EM GC D T+N +I LCK I
Sbjct: 509 VVGVIANKVTYNTLIHAFLRNGEIQEALKLVNEMLFRGCLLDAITYNGLIKALCKAGAID 568
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L + M+ +G P++++ +L++ LC+
Sbjct: 569 KGLGLFEEMIRKGLVPSSISCNILVNGLCK 598
Score = 103 bits (256), Expect = 8e-20
Identities = 60/187 (32%), Positives = 97/187 (51%)
Frame = +3
Query: 195 LFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYE 374
LF ++ Y + +A ++ D+ + C+P ++N+ + L C A + E
Sbjct: 342 LFNTLINGYVASGRFDEAKAVVYDIMLSIGCKPDVFTFNILIHGLCKKGCLGSALELVNE 401
Query: 375 MLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNR 554
M KG P V T+++++ LC + A +L +M+ N++ Y TLI AL + +
Sbjct: 402 MEGKGCKPNVITYSILIDGLCKEGRLLEAGDVLNEMSAKEVSLNTVGYNTLISALCRNGK 461
Query: 555 VDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGV 734
+ EA ++L EM GC PD+ TFN +I GLCK +++ A L ML+ G N VTY
Sbjct: 462 IREAREMLGEMSSKGCKPDIFTFNSLIFGLCKVDQMEAAMGLYRDMLVVGVIANKVTYNT 521
Query: 735 LMHALCR 755
L+HA R
Sbjct: 522 LIHAFLR 528
Score = 100 bits (249), Expect = 5e-19
Identities = 53/151 (35%), Positives = 81/151 (53%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + + A + EML +G T+ ++KALC +D L +M
Sbjct: 518 TYNTLIHAFLRNGEIQEALKLVNEMLFRGCLLDAITYNGLIKALCKAGAIDKGLGLFEEM 577
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G VP+SI L++ L K +V AL+ L EM G TPD+ T+N +I+GLCK RI
Sbjct: 578 IRKGLVPSSISCNILVNGLCKARKVHNALEFLREMIHRGLTPDIVTYNSLINGLCKAGRI 637
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
EA L D++ + G P+A+TY L+ C+
Sbjct: 638 REALSLFDKLKVEGIYPDAITYNTLISWHCK 668
Score = 87.0 bits (214), Expect = 6e-15
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Frame = +3
Query: 60 AQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALP 239
+ KG + + LI L + + L M G++ + + ++ + R
Sbjct: 473 SSKGCKPDIFTFNSLIFGLCKVDQMEAAMGLYRDMLVVGVIANKVTYNTLIHAFLRNGEI 532
Query: 240 GQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTF 413
+A +L+ +M RG C +YN + L +F EM+ KG+ P+ +
Sbjct: 533 QEALKLVNEMLFRG---CLLDAITYNGLIKALCKAGAIDKGLGLFEEMIRKGLVPSSISC 589
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ LC +V +A LR+M G P+ + Y +LI+ L K R+ EAL L +++ +
Sbjct: 590 NILVNGLCKARKVHNALEFLREMIHRGLTPDIVTYNSLINGLCKAGRIREALSLFDKLKV 649
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLM 740
G PD T+N +I CK EA L+ R + GF PN VT+ +L+
Sbjct: 650 EGIYPDAITYNTLISWHCKEGVFDEACLLLHRGVEYGFVPNDVTWFILV 698
>ref|XP_006352878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 612
Score = 417 bits (1071), Expect = e-114
Identities = 196/251 (78%), Positives = 229/251 (91%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLDVPTSME+F+WA +Q Y HSFDVYY LIDKLG A+EF +IDRLL+QMK+EG V
Sbjct: 78 LLALPLDVPTSMELFQWASSQTSYCHSFDVYYTLIDKLGAAKEFKIIDRLLLQMKDEGAV 137
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFI+IM++YGRA LPGQATR+LLDM +SC+PTF+SYN ALDIL+AG+CPKVAPN
Sbjct: 138 FKESLFIMIMRHYGRAGLPGQATRILLDMWNTFSCKPTFKSYNQALDILLAGNCPKVAPN 197
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFYEML K ISP+V+TFA V++ALC+VNEVDSACSLLRDMTKHGCVPNS++YQ LIHAL
Sbjct: 198 VFYEMLGKDISPSVFTFARVIQALCIVNEVDSACSLLRDMTKHGCVPNSVIYQILIHALS 257
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV++ALKLLEEMFLMGC PDV+TFND+IHGLC+ +RIHEAAKLVDRMLLRGFTP+A+
Sbjct: 258 KSNRVNDALKLLEEMFLMGCIPDVNTFNDIIHGLCRADRIHEAAKLVDRMLLRGFTPDAI 317
Query: 723 TYGVLMHALCR 755
TYG+LMHALCR
Sbjct: 318 TYGILMHALCR 328
Score = 113 bits (283), Expect = 6e-23
Identities = 64/230 (27%), Positives = 112/230 (48%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KGY+ Y +LI L + + ++ +M +GI + ++ + +A +
Sbjct: 377 KGYQPDVYTYNILIRGLCKKGILSSAHEVVNEMSSKGIQPNAITYTTLIDGFSKAGRLQE 436
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
A L+ +M A + YN + L + A +F +M + G P ++TF ++
Sbjct: 437 AHDLVTEM-SAKNLSLNIMGYNSLISALSKQGMIQQALEIFGDMSSNGCKPDIFTFNALI 495
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
C ++++D A + RDM + G + N++ Y TLIHA + + EALKL+ +M GC
Sbjct: 496 LGFCKIDKMDEALGIYRDMFQEGVIANTVTYNTLIHAFLRKGKTQEALKLVNDMLFRGCP 555
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
D T+N +I LC + A L + M+ +G PN VT +L++ CR
Sbjct: 556 LDEITYNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCR 605
Score = 90.5 bits (223), Expect = 6e-16
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Frame = +3
Query: 150 LLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDIL 329
LL M + G V ++ +++ ++ A +LL +M C P ++N + L
Sbjct: 233 LLRDMTKHGCVPNSVIYQILIHALSKSNRVNDALKLLEEMF-LMGCIPDVNTFNDIIHGL 291
Query: 330 VAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNS 509
A + ML +G +P T+ ++M ALC VD A LL + N+
Sbjct: 292 CRADRIHEAAKLVDRMLLRGFTPDAITYGILMHALCRTGRVDEAKVLLNKAPEQ----NN 347
Query: 510 IVYQTLIHALYKVNRVDEALKLLEE-MFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVD 686
+++ TLI+ RVDEA +L E M + G PDV T+N +I GLCK + A ++V+
Sbjct: 348 VLFNTLINGYVTNGRVDEAKTILNENMLIKGYQPDVYTYNILIRGLCKKGILSSAHEVVN 407
Query: 687 RMLLRGFTPNAVTYGVLM 740
M +G PNA+TY L+
Sbjct: 408 EMSSKGIQPNAITYTTLI 425
Score = 82.4 bits (202), Expect = 2e-13
Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 35/162 (21%)
Frame = +3
Query: 375 MLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNR 554
ML KG P VYT+ ++++ LC + SA ++ +M+ G PN+I Y TLI K R
Sbjct: 374 MLIKGYQPDVYTYNILIRGLCKKGILSSAHEVVNEMSSKGIQPNAITYTTLIDGFSKAGR 433
Query: 555 VDE-----------------------------------ALKLLEEMFLMGCTPDVDTFND 629
+ E AL++ +M GC PD+ TFN
Sbjct: 434 LQEAHDLVTEMSAKNLSLNIMGYNSLISALSKQGMIQQALEIFGDMSSNGCKPDIFTFNA 493
Query: 630 VIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+I G CK +++ EA + M G N VTY L+HA R
Sbjct: 494 LILGFCKIDKMDEALGIYRDMFQEGVIANTVTYNTLIHAFLR 535
>ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565372595|ref|XP_006352877.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 720
Score = 417 bits (1071), Expect = e-114
Identities = 196/251 (78%), Positives = 229/251 (91%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLDVPTSME+F+WA +Q Y HSFDVYY LIDKLG A+EF +IDRLL+QMK+EG V
Sbjct: 78 LLALPLDVPTSMELFQWASSQTSYCHSFDVYYTLIDKLGAAKEFKIIDRLLLQMKDEGAV 137
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFI+IM++YGRA LPGQATR+LLDM +SC+PTF+SYN ALDIL+AG+CPKVAPN
Sbjct: 138 FKESLFIMIMRHYGRAGLPGQATRILLDMWNTFSCKPTFKSYNQALDILLAGNCPKVAPN 197
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFYEML K ISP+V+TFA V++ALC+VNEVDSACSLLRDMTKHGCVPNS++YQ LIHAL
Sbjct: 198 VFYEMLGKDISPSVFTFARVIQALCIVNEVDSACSLLRDMTKHGCVPNSVIYQILIHALS 257
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV++ALKLLEEMFLMGC PDV+TFND+IHGLC+ +RIHEAAKLVDRMLLRGFTP+A+
Sbjct: 258 KSNRVNDALKLLEEMFLMGCIPDVNTFNDIIHGLCRADRIHEAAKLVDRMLLRGFTPDAI 317
Query: 723 TYGVLMHALCR 755
TYG+LMHALCR
Sbjct: 318 TYGILMHALCR 328
Score = 113 bits (283), Expect = 6e-23
Identities = 64/230 (27%), Positives = 112/230 (48%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KGY+ Y +LI L + + ++ +M +GI + ++ + +A +
Sbjct: 377 KGYQPDVYTYNILIRGLCKKGILSSAHEVVNEMSSKGIQPNAITYTTLIDGFSKAGRLQE 436
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
A L+ +M A + YN + L + A +F +M + G P ++TF ++
Sbjct: 437 AHDLVTEM-SAKNLSLNIMGYNSLISALSKQGMIQQALEIFGDMSSNGCKPDIFTFNALI 495
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
C ++++D A + RDM + G + N++ Y TLIHA + + EALKL+ +M GC
Sbjct: 496 LGFCKIDKMDEALGIYRDMFQEGVIANTVTYNTLIHAFLRKGKTQEALKLVNDMLFRGCP 555
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
D T+N +I LC + A L + M+ +G PN VT +L++ CR
Sbjct: 556 LDEITYNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCR 605
Score = 95.1 bits (235), Expect = 2e-17
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Frame = +3
Query: 105 IDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDM--RGA 278
IDK+ EA + M +EG++ + ++ + R +A +L+ DM RG
Sbjct: 501 IDKMDEALG------IYRDMFQEGVIANTVTYNTLIHAFLRKGKTQEALKLVNDMLFRGC 554
Query: 279 YSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDS 458
E T YN + L + A +F EM+ KG P T +++ C + +V +
Sbjct: 555 PLDEIT---YNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCRIGKVQN 611
Query: 459 ACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIH 638
A LRD+ G P+ + Y +LI+ L R+ EA L E++ L G PD T+N +I
Sbjct: 612 ALEFLRDLIHRGLTPDIVTYNSLINGLCNNGRIREAQNLFEKLELEGVCPDTITYNTLIS 671
Query: 639 GLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
CK + +A L R + GF PN+VT+ +L+ R
Sbjct: 672 SYCKMRMLDDAYTLFTRGIAVGFIPNSVTWYILVRNFVR 710
Score = 90.5 bits (223), Expect = 6e-16
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Frame = +3
Query: 150 LLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDIL 329
LL M + G V ++ +++ ++ A +LL +M C P ++N + L
Sbjct: 233 LLRDMTKHGCVPNSVIYQILIHALSKSNRVNDALKLLEEMF-LMGCIPDVNTFNDIIHGL 291
Query: 330 VAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNS 509
A + ML +G +P T+ ++M ALC VD A LL + N+
Sbjct: 292 CRADRIHEAAKLVDRMLLRGFTPDAITYGILMHALCRTGRVDEAKVLLNKAPEQ----NN 347
Query: 510 IVYQTLIHALYKVNRVDEALKLLEE-MFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVD 686
+++ TLI+ RVDEA +L E M + G PDV T+N +I GLCK + A ++V+
Sbjct: 348 VLFNTLINGYVTNGRVDEAKTILNENMLIKGYQPDVYTYNILIRGLCKKGILSSAHEVVN 407
Query: 687 RMLLRGFTPNAVTYGVLM 740
M +G PNA+TY L+
Sbjct: 408 EMSSKGIQPNAITYTTLI 425
Score = 82.4 bits (202), Expect = 2e-13
Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 35/162 (21%)
Frame = +3
Query: 375 MLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNR 554
ML KG P VYT+ ++++ LC + SA ++ +M+ G PN+I Y TLI K R
Sbjct: 374 MLIKGYQPDVYTYNILIRGLCKKGILSSAHEVVNEMSSKGIQPNAITYTTLIDGFSKAGR 433
Query: 555 VDE-----------------------------------ALKLLEEMFLMGCTPDVDTFND 629
+ E AL++ +M GC PD+ TFN
Sbjct: 434 LQEAHDLVTEMSAKNLSLNIMGYNSLISALSKQGMIQQALEIFGDMSSNGCKPDIFTFNA 493
Query: 630 VIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+I G CK +++ EA + M G N VTY L+HA R
Sbjct: 494 LILGFCKIDKMDEALGIYRDMFQEGVIANTVTYNTLIHAFLR 535
>ref|XP_004301520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 711
Score = 415 bits (1066), Expect = e-113
Identities = 199/251 (79%), Positives = 226/251 (90%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPTS+E+FE GAQ+GYRHSFDVY VLIDKLG A EF IDRLL+Q+K EG+V
Sbjct: 69 LLELPLDVPTSLEVFEMVGAQRGYRHSFDVYCVLIDKLGAAGEFKAIDRLLMQIKAEGMV 128
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRESLFI+IMK+YGRA LPGQATRLLLDMRG YS EPTF+SYN LD+LVAG+CPKVAPN
Sbjct: 129 FRESLFIMIMKHYGRAGLPGQATRLLLDMRGFYSFEPTFKSYNAVLDVLVAGNCPKVAPN 188
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++G+SP VYTF +V+KA C+VNEVDSACSLLRDMTKHGCVPNS+VYQTLIHAL
Sbjct: 189 VFYDMLSRGVSPNVYTFGLVLKAFCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALC 248
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ RV+EAL+LLEEMFLMGCTPDV TFNDVIHGLCK R+ EAAKLVDRMLLRGF+P+ +
Sbjct: 249 RNERVNEALRLLEEMFLMGCTPDVQTFNDVIHGLCKAKRMPEAAKLVDRMLLRGFSPDEI 308
Query: 723 TYGVLMHALCR 755
TYGVLM+ LCR
Sbjct: 309 TYGVLMNGLCR 319
Score = 105 bits (262), Expect = 2e-20
Identities = 74/230 (32%), Positives = 110/230 (47%), Gaps = 4/230 (1%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
+G+ Y VL++ L A + + LL ++ V LF ++ Y + +
Sbjct: 301 RGFSPDEITYGVLMNGLCRAGQVDEARALLDKVPSPNAV----LFNTLINGYVTSGRFDE 356
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTF 413
A + D C+ ++N IL+ G C K A + EM KG P V T+
Sbjct: 357 AKAVYRDSMLGNGCDLDVYTFN----ILIRGLCKKGSLASARELVSEMETKGCKPNVITY 412
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ LC ++ A +L +M+ G N + Y +LI AL K +V EALKL E+
Sbjct: 413 TILVDGLCKEGQLQEASDVLNEMSYKGLGLNIVGYNSLISALCKDGKVHEALKLFREISS 472
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMH 743
GC D+ TFN +I GLCK +R+ EA L MLL G N VTY L+H
Sbjct: 473 KGCKADIYTFNSLIFGLCKVDRMEEALGLYHDMLLEGVIANTVTYNTLIH 522
Score = 97.1 bits (240), Expect = 6e-18
Identities = 54/151 (35%), Positives = 82/151 (54%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + G K A + EML++G T+ ++KALC V+ A L +M
Sbjct: 516 TYNTLIHGYLTGGAIKEALKLVNEMLSRGCPLDKITYNGLVKALCRAGLVEKARGLFEEM 575
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G P+SI LI+ L + +V+EAL+ L +M G PD+ T+N +I+GLCK I
Sbjct: 576 MRTGLHPDSISCNILINGLCRSGKVNEALEFLRDMIHRGLMPDIVTYNSLINGLCKMGHI 635
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
EA L DR+ G P+A+TY L+ C+
Sbjct: 636 WEALNLFDRLQAEGVYPDAITYNTLISWHCK 666
Score = 96.3 bits (238), Expect = 1e-17
Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
Frame = +3
Query: 150 LLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDIL 329
LL M + G V ++ ++ R +A RLL +M C P +++N + L
Sbjct: 224 LLRDMTKHGCVPNSVVYQTLIHALCRNERVNEALRLLEEMF-LMGCTPDVQTFNDVIHGL 282
Query: 330 VAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNS 509
A + ML +G SP T+ V+M LC +VD A +LL + PN+
Sbjct: 283 CKAKRMPEAAKLVDRMLLRGFSPDEITYGVLMNGLCRAGQVDEARALLDKVPS----PNA 338
Query: 510 IVYQTLIHALYKVNRVDEALKLLEEMFL-MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVD 686
+++ TLI+ R DEA + + L GC DV TFN +I GLCK + A +LV
Sbjct: 339 VLFNTLINGYVTSGRFDEAKAVYRDSMLGNGCDLDVYTFNILIRGLCKKGSLASARELVS 398
Query: 687 RMLLRGFTPNAVTYGVLMHALCR 755
M +G PN +TY +L+ LC+
Sbjct: 399 EMETKGCKPNVITYTILVDGLCK 421
Score = 95.9 bits (237), Expect = 1e-17
Identities = 57/170 (33%), Positives = 88/170 (51%)
Frame = +3
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
+ R L+ C+P +Y + +D L + A +V EM KG+ + + ++
Sbjct: 392 SARELVSEMETKGCKPNVITYTILVDGLCKEGQLQEASDVLNEMSYKGLGLNIVGYNSLI 451
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
ALC +V A L R+++ GC + + +LI L KV+R++EAL L +M L G
Sbjct: 452 SALCKDGKVHEALKLFREISSKGCKADIYTFNSLIFGLCKVDRMEEALGLYHDMLLEGVI 511
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ T+N +IHG I EA KLV+ ML RG + +TY L+ ALCR
Sbjct: 512 ANTVTYNTLIHGYLTGGAIKEALKLVNEMLSRGCPLDKITYNGLVKALCR 561
Score = 95.1 bits (235), Expect = 2e-17
Identities = 48/150 (32%), Positives = 78/150 (52%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L A +F E+ +KG +YTF ++ LC V+ ++ A L DM
Sbjct: 447 YNSLISALCKDGKVHEALKLFREISSKGCKADIYTFNSLIFGLCKVDRMEEALGLYHDML 506
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + N++ Y TLIH + EALKL+ EM GC D T+N ++ LC+ +
Sbjct: 507 LEGVIANTVTYNTLIHGYLTGGAIKEALKLVNEMLSRGCPLDKITYNGLVKALCRAGLVE 566
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+A L + M+ G P++++ +L++ LCR
Sbjct: 567 KARGLFEEMMRTGLHPDSISCNILINGLCR 596
Score = 90.9 bits (224), Expect = 4e-16
Identities = 56/195 (28%), Positives = 95/195 (48%)
Frame = +3
Query: 171 EGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK 350
EG++ + ++ Y +A +L+ +M C +YN + L +
Sbjct: 508 EGVIANTVTYNTLIHGYLTGGAIKEALKLVNEMLSR-GCPLDKITYNGLVKALCRAGLVE 566
Query: 351 VAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLI 530
A +F EM+ G+ P + +++ LC +V+ A LRDM G +P+ + Y +LI
Sbjct: 567 KARGLFEEMMRTGLHPDSISCNILINGLCRSGKVNEALEFLRDMIHRGLMPDIVTYNSLI 626
Query: 531 HALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFT 710
+ L K+ + EAL L + + G PD T+N +I CK RI +A L+ R + GF
Sbjct: 627 NGLCKMGHIWEALNLFDRLQAEGVYPDAITYNTLISWHCKEGRISDACLLLHRGVTNGFI 686
Query: 711 PNAVTYGVLMHALCR 755
PN VT+ +L+ L +
Sbjct: 687 PNHVTWYILVSNLSK 701
Score = 81.6 bits (200), Expect = 3e-13
Identities = 43/127 (33%), Positives = 66/127 (51%)
Frame = +3
Query: 375 MLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNR 554
ML G VYTF ++++ LC + SA L+ +M GC PN I Y L+ L K +
Sbjct: 365 MLGNGCDLDVYTFNILIRGLCKKGSLASARELVSEMETKGCKPNVITYTILVDGLCKEGQ 424
Query: 555 VDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGV 734
+ EA +L EM G ++ +N +I LCK ++HEA KL + +G + T+
Sbjct: 425 LQEASDVLNEMSYKGLGLNIVGYNSLISALCKDGKVHEALKLFREISSKGCKADIYTFNS 484
Query: 735 LMHALCR 755
L+ LC+
Sbjct: 485 LIFGLCK 491
>ref|XP_004508428.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X1 [Cicer arietinum]
gi|502151414|ref|XP_004508429.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X2 [Cicer arietinum]
gi|502151416|ref|XP_004508430.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X3 [Cicer arietinum]
gi|502151418|ref|XP_004508431.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like isoform X4 [Cicer arietinum]
Length = 712
Score = 406 bits (1044), Expect = e-111
Identities = 194/251 (77%), Positives = 223/251 (88%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLD+PTSME+FE AG+Q+GY HSF VYY+LIDKLG EF ID+LL QMKEEG+V
Sbjct: 75 LLELPLDIPTSMELFEKAGSQRGYCHSFHVYYLLIDKLGAVGEFKTIDKLLKQMKEEGVV 134
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFILIM+ YG+A PGQATRLLLDM G YSCEPTF+SYNV L+ILVAG+CPKVAPN
Sbjct: 135 FKESLFILIMRCYGKAGFPGQATRLLLDMWGVYSCEPTFKSYNVVLEILVAGNCPKVAPN 194
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++GISPTV+TF VVMKA C++NEVDSACSLLRDMTK+GCVPNSI+YQTLIHAL
Sbjct: 195 VFYDMLSRGISPTVHTFGVVMKAFCMINEVDSACSLLRDMTKYGCVPNSIIYQTLIHALS 254
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ NRV++A+KLLEEMFLMGC PDV TFNDVIHGLC+ RIHEAAKL+DRMLLRGF +A+
Sbjct: 255 ENNRVNDAMKLLEEMFLMGCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFAADAL 314
Query: 723 TYGVLMHALCR 755
YG LMH LCR
Sbjct: 315 IYGYLMHGLCR 325
Score = 104 bits (260), Expect = 3e-20
Identities = 54/156 (34%), Positives = 84/156 (53%)
Frame = +3
Query: 288 EPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACS 467
EP ++N+ +D L A EM+ KG P V T+ +++ C ++ A
Sbjct: 377 EPDAFTFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKQGRLEEAAE 436
Query: 468 LLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLC 647
++ +M+ G N++ Y LI AL K ++ +AL++ +EM GC PD+ TFN +I+GLC
Sbjct: 437 VVNNMSAKGLSLNTVGYNCLICALCKDGKIQDALQMYDEMSSKGCKPDIYTFNSLIYGLC 496
Query: 648 KYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
K +++ EA L M L G N VTY L+HA R
Sbjct: 497 KTDKMEEALGLYRDMFLEGVIANTVTYNTLIHAFLR 532
Score = 100 bits (248), Expect = 7e-19
Identities = 62/229 (27%), Positives = 111/229 (48%)
Frame = +3
Query: 69 GYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQA 248
GY + ++ID L + L +M E+G + +++ + + +A
Sbjct: 375 GYEPDAFTFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKQGRLEEA 434
Query: 249 TRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMK 428
++ +M A YN + L + A ++ EM +KG P +YTF ++
Sbjct: 435 AEVVNNM-SAKGLSLNTVGYNCLICALCKDGKIQDALQMYDEMSSKGCKPDIYTFNSLIY 493
Query: 429 ALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTP 608
LC ++++ A L RDM G + N++ Y TLIHA + + + +A KL++EM GC
Sbjct: 494 GLCKTDKMEEALGLYRDMFLEGVIANTVTYNTLIHAFLRGDSIQQAYKLVDEMIFRGCPL 553
Query: 609 DVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
D T+N +I LCK I + L++ ML +G P+ + +L+++ CR
Sbjct: 554 DNITYNGLIKALCKTGAIEKGLGLLEEMLGKGIFPSINSCNILINSFCR 602
Score = 92.4 bits (228), Expect = 1e-16
Identities = 49/150 (32%), Positives = 80/150 (53%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + G + A + EM+ +G T+ ++KALC ++ LL +M
Sbjct: 522 TYNTLIHAFLRGDSIQQAYKLVDEMIFRGCPLDNITYNGLIKALCKTGAIEKGLGLLEEM 581
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
G P+ LI++ ++ +V+EAL+ L +M G TPD+ T+N +I+GLCK R+
Sbjct: 582 LGKGIFPSINSCNILINSFCRIGKVNEALQFLRDMIHRGLTPDIVTYNCLINGLCKTGRV 641
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALC 752
EA L +R+ G P+AVTY L+ C
Sbjct: 642 QEALNLFNRLQAEGTRPDAVTYNTLISRYC 671
Score = 88.2 bits (217), Expect = 3e-15
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Frame = +3
Query: 171 EGIVFRESLFILIMKYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHC 344
EG++ + ++ + R QA +L+ +M RG C +YN + L
Sbjct: 514 EGVIANTVTYNTLIHAFLRGDSIQQAYKLVDEMIFRG---CPLDNITYNGLIKALCKTGA 570
Query: 345 PKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQT 524
+ + EML KGI P++ + +++ + C + +V+ A LRDM G P+ + Y
Sbjct: 571 IEKGLGLLEEMLGKGIFPSINSCNILINSFCRIGKVNEALQFLRDMIHRGLTPDIVTYNC 630
Query: 525 LIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRG 704
LI+ L K RV EAL L + G PD T+N +I C +EA L+ + + G
Sbjct: 631 LINGLCKTGRVQEALNLFNRLQAEGTRPDAVTYNTLISRYCYEGLFNEACLLLYKGVNNG 690
Query: 705 FTPNAVTYGVLM 740
F PN +T+ +L+
Sbjct: 691 FIPNEITWSILI 702
>ref|XP_007141459.1| hypothetical protein PHAVU_008G197500g [Phaseolus vulgaris]
gi|561014592|gb|ESW13453.1| hypothetical protein
PHAVU_008G197500g [Phaseolus vulgaris]
Length = 721
Score = 401 bits (1031), Expect = e-109
Identities = 190/251 (75%), Positives = 222/251 (88%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LL LPLD+PTSME+F+ AGAQKGY H+FD YY+LIDKLG +F V++ LL QMK+EG+V
Sbjct: 76 LLVLPLDIPTSMELFQRAGAQKGYCHTFDAYYLLIDKLGAVGDFKVVENLLKQMKDEGVV 135
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFILIMKYYG+A LPGQATRLLLDM G YSC+PTF+SYNV L ILV G+CP+VAPN
Sbjct: 136 FKESLFILIMKYYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLQILVDGNCPRVAPN 195
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++G+SPTV+TFAVVMKALC+VNEVDSACSLLRDM KHGCVPNS++YQTLIHAL
Sbjct: 196 VFYDMLSRGVSPTVHTFAVVMKALCMVNEVDSACSLLRDMAKHGCVPNSVIYQTLIHALC 255
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ NRV EA++LLE+MFLM C PDV TFNDVIHGLC+ RIHEAAKL+DRMLLRGF+ +A
Sbjct: 256 ENNRVSEAMRLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSADAR 315
Query: 723 TYGVLMHALCR 755
TYG LMH LCR
Sbjct: 316 TYGYLMHGLCR 326
Score = 100 bits (250), Expect = 4e-19
Identities = 51/134 (38%), Positives = 76/134 (56%)
Frame = +3
Query: 354 APNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIH 533
A +F+EM +KG P +YTF ++ LC ++++ A SL DM G + N++ Y TLI
Sbjct: 470 ALQLFHEMSSKGCKPDIYTFNSLIHGLCRNDKMEHALSLYHDMFLEGVIANTVTYNTLIS 529
Query: 534 ALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTP 713
A + V +A KL++EM GC D T+N +I LCK + + L + ML RG P
Sbjct: 530 AFLMRDSVQQAFKLVDEMLFRGCPLDSITYNGLIKVLCKTGSVEKGLGLFEEMLGRGIFP 589
Query: 714 NAVTYGVLMHALCR 755
+T +L+ ALCR
Sbjct: 590 TIITCNILISALCR 603
Score = 95.9 bits (237), Expect = 1e-17
Identities = 52/168 (30%), Positives = 83/168 (49%)
Frame = +3
Query: 243 QATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVV 422
+A LL + EP ++N+ +D L A +++ KG P V T+ ++
Sbjct: 363 EAKGLLYNSMVTAGYEPDAYTFNIMIDGLCKQGYLVSALGFLSDVVAKGFEPNVITYTIL 422
Query: 423 MKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGC 602
+ C ++ ++ M+ G ++ Y LI AL K +++EAL+L EM GC
Sbjct: 423 INGFCKQGRLEEVTGIVNSMSAKGLSLTTVGYNCLICALSKDGKIEEALQLFHEMSSKGC 482
Query: 603 TPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHA 746
PD+ TFN +IHGLC+ +++ A L M L G N VTY L+ A
Sbjct: 483 KPDIYTFNSLIHGLCRNDKMEHALSLYHDMFLEGVIANTVTYNTLISA 530
Score = 94.0 bits (232), Expect = 5e-17
Identities = 58/230 (25%), Positives = 111/230 (48%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KG+ + Y +LI+ + + ++ M +G+ + ++ + +
Sbjct: 410 KGFEPNVITYTILINGFCKQGRLEEVTGIVNSMSAKGLSLTTVGYNCLICALSKDGKIEE 469
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVM 425
A +L +M + C+P ++N + L + A +++++M +G+ T+ ++
Sbjct: 470 ALQLFHEM-SSKGCKPDIYTFNSLIHGLCRNDKMEHALSLYHDMFLEGVIANTVTYNTLI 528
Query: 426 KALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCT 605
A + + V A L+ +M GC +SI Y LI L K V++ L L EEM G
Sbjct: 529 SAFLMRDSVQQAFKLVDEMLFRGCPLDSITYNGLIKVLCKTGSVEKGLGLFEEMLGRGIF 588
Query: 606 PDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
P + T N +I LC+ ++++A K + M+ RG TPN V+Y L++ LC+
Sbjct: 589 PTIITCNILISALCRTGKVNDALKFLRDMIHRGLTPNIVSYNCLINGLCK 638
Score = 74.7 bits (182), Expect = 3e-11
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYE-MLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
YN ++ V+ + A + Y M+ G P YTF +++ LC + SA L D+
Sbjct: 348 YNTLINGYVSSGRFEEAKGLLYNSMVTAGYEPDAYTFNIMIDGLCKQGYLVSALGFLSDV 407
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
G PN I Y LI+ K R++E ++ M G + +N +I L K +I
Sbjct: 408 VAKGFEPNVITYTILINGFCKQGRLEEVTGIVNSMSAKGLSLTTVGYNCLICALSKDGKI 467
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
EA +L M +G P+ T+ L+H LCR
Sbjct: 468 EEALQLFHEMSSKGCKPDIYTFNSLIHGLCR 498
Score = 72.8 bits (177), Expect = 1e-10
Identities = 40/130 (30%), Positives = 65/130 (50%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + + A + EML +G T+ ++K LC V+ L +M
Sbjct: 523 TYNTLISAFLMRDSVQQAFKLVDEMLFRGCPLDSITYNGLIKVLCKTGSVEKGLGLFEEM 582
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
G P I LI AL + +V++ALK L +M G TP++ ++N +I+GLCK I
Sbjct: 583 LGRGIFPTIITCNILISALCRTGKVNDALKFLRDMIHRGLTPNIVSYNCLINGLCKMGHI 642
Query: 663 HEAAKLVDRM 692
EA + +R+
Sbjct: 643 QEALNIFNRL 652
>ref|XP_003518493.2| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 739
Score = 401 bits (1030), Expect = e-109
Identities = 190/251 (75%), Positives = 223/251 (88%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLD+PTSME+F+ AGAQKGY H+FD Y+LIDKLG +F VI++LL QMK+EG++
Sbjct: 86 LLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLL 145
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFILIMK+YG+A LPGQATRLLLDM G YSC+PTF+SYNV LDILV G CP+VAPN
Sbjct: 146 FKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPN 205
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++G+SPTVYTF VVMKALC+V+EVDSACSLLRDM KHGCVPNS++YQTLIHAL
Sbjct: 206 VFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALC 265
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ NRV EAL+LLE+MFLM C PDV TFNDVIHGLC+ RIHEAAKL+DRMLLRGF+ +A+
Sbjct: 266 ENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDAL 325
Query: 723 TYGVLMHALCR 755
TYG LMH LCR
Sbjct: 326 TYGYLMHGLCR 336
Score = 103 bits (256), Expect = 8e-20
Identities = 55/153 (35%), Positives = 82/153 (53%)
Frame = +3
Query: 288 EPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACS 467
EP ++N+ +D LV A + EM+ K P V T+ +++ C ++ A
Sbjct: 388 EPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAE 447
Query: 468 LLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLC 647
++ M+ G N++ Y LI AL K ++EAL+L EM GC PD+ TFN +I+GLC
Sbjct: 448 IVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLC 507
Query: 648 KYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHA 746
K +++ EA L M L G N VTY L+HA
Sbjct: 508 KNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 540
Score = 99.0 bits (245), Expect = 2e-18
Identities = 50/150 (33%), Positives = 79/150 (52%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A +F EM KG P +YTF ++ LC ++++ A SL DM
Sbjct: 464 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 523
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + N++ Y TL+HA + + +A KL++EM GC D T+N +I LCK +
Sbjct: 524 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 583
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L + ML +G P ++ +L+ LCR
Sbjct: 584 KGLGLFEEMLGKGIFPTIISCNILISGLCR 613
Score = 97.1 bits (240), Expect = 6e-18
Identities = 52/171 (30%), Positives = 94/171 (54%)
Frame = +3
Query: 243 QATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVV 422
+A +L +M G C+P ++N ++ L H + A +++++M +G+ T+ +
Sbjct: 479 EALQLFGEMSGK-GCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 537
Query: 423 MKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGC 602
+ A + + + A L+ +M GC ++I Y LI AL K V++ L L EEM G
Sbjct: 538 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 597
Query: 603 TPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
P + + N +I GLC+ ++++A K + M+ RG TP+ VTY L++ LC+
Sbjct: 598 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 648
Score = 92.8 bits (229), Expect = 1e-16
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Frame = +3
Query: 96 YVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRG 275
YV + EA++ + ++ + + F + L+ K Y +AL LL+
Sbjct: 365 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE------LLNEMV 418
Query: 276 AYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTFAVVMKALCLV 443
A EP +Y IL+ G C + A + M KG+S + ++ ALC
Sbjct: 419 AKRFEPNVITYT----ILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 474
Query: 444 NEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTF 623
++ A L +M+ GC P+ + +LI+ L K ++++EAL L +MFL G + T+
Sbjct: 475 GNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTY 534
Query: 624 NDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
N ++H + I +A KLVD ML RG + +TY L+ ALC+
Sbjct: 535 NTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCK 578
Score = 89.4 bits (220), Expect = 1e-15
Identities = 48/150 (32%), Positives = 77/150 (51%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN + + + A + EML +G T+ ++KALC V+ L +M
Sbjct: 533 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 592
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
G P I LI L + +V++ALK L++M G TPD+ T+N +I+GLCK +
Sbjct: 593 LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHV 652
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALC 752
EA+ L +++ G P+A+TY L+ C
Sbjct: 653 QEASNLFNKLQSEGIRPDAITYNTLISRHC 682
Score = 86.7 bits (213), Expect = 8e-15
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Frame = +3
Query: 21 DVPTSMEIF-EWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESL 197
++ ++++F E +G KG + + LI+ L + + L M EG++
Sbjct: 476 NIEEALQLFGEMSG--KGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 533
Query: 198 FILIMKYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFY 371
+ ++ + QA +L+ +M RG C +YN + L + +F
Sbjct: 534 YNTLVHAFLMRDSIQQAFKLVDEMLFRG---CPLDNITYNGLIKALCKTGAVEKGLGLFE 590
Query: 372 EMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVN 551
EML KGI PT+ + +++ LC +V+ A L+DM G P+ + Y +LI+ L K+
Sbjct: 591 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 650
Query: 552 RVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYG 731
V EA L ++ G PD T+N +I C ++A L+ + + GF PN VT+
Sbjct: 651 HVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 710
Query: 732 VLMHALCR 755
+L++ + +
Sbjct: 711 ILINYIVK 718
>ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor
[Medicago truncatula]
Length = 948
Score = 401 bits (1030), Expect = e-109
Identities = 196/251 (78%), Positives = 219/251 (87%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPTSM++FE AG Q+GY HSF VYY+LIDKLG EF +ID+LL QMK+EG V
Sbjct: 67 LLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCV 126
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFILIM+YYG+A LPGQATRLLLDM G Y EPTF+SYNV L+ILVAG+CPKVAPN
Sbjct: 127 FKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPN 186
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++GISPTVYTF VVMKA C+VNEVDSACSLLRDMTKHGCVPNSI+YQ LIHAL
Sbjct: 187 VFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALS 246
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ NRV+EA+KLLEEMFLMGC PDV TFNDVIHGLCK RIHEAAKL DRMLLR FT +A+
Sbjct: 247 ENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADAL 306
Query: 723 TYGVLMHALCR 755
G LMH LCR
Sbjct: 307 IQGYLMHGLCR 317
Score = 102 bits (255), Expect = 1e-19
Identities = 55/156 (35%), Positives = 82/156 (52%)
Frame = +3
Query: 288 EPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACS 467
EP ++N+ +D L A EM+ KG P V T+ +++ C + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASK 428
Query: 468 LLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLC 647
++ M+ G N++ Y LI AL K ++ +AL++ EM GC PD+ TFN +I+GLC
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLC 488
Query: 648 KYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
K +++ EA L MLL G N VTY L+HA R
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524
Score = 89.4 bits (220), Expect = 1e-15
Identities = 47/150 (31%), Positives = 79/150 (52%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L + A ++ EM +KG P +YTF ++ LC ++++ A L RDM
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + N++ Y TLIHA ++ + +A KL+ EM GC D T+N +I LCK
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ L+++M P+ + +L+++ CR
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCR 594
Score = 85.1 bits (209), Expect = 2e-14
Identities = 50/191 (26%), Positives = 94/191 (49%)
Frame = +3
Query: 171 EGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK 350
EG++ + ++ + R L QA +L+ +MR C +YN + L +
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFR-GCPLDNITYNGLIKALCKTGATE 564
Query: 351 VAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLI 530
+ +M + I P++ + +++ + C +V+ A LRDM + G P+ + Y +LI
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 531 HALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFT 710
+ L K+ R EAL L + G PD T+N +I C ++A +L+ + + GF
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 711 PNAVTYGVLMH 743
PN +T+ +L++
Sbjct: 685 PNEITWSILIN 695
Score = 82.8 bits (203), Expect = 1e-13
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Frame = +3
Query: 63 QKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPG 242
+KG+ + Y +LID + F +++ M +G+ + ++ +
Sbjct: 400 KKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQ 459
Query: 243 QATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVV 422
A ++ +M + C+P ++N + L + A ++ +ML +G+ T+ +
Sbjct: 460 DALQMYGEM-SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 423 MKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVN----------------- 551
+ A + + A L+ +M GC ++I Y LI AL K
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578
Query: 552 ------------------RVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAK 677
+V++AL+ L +M G TPD+ T+N +I+GLCK R EA
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638
Query: 678 LVDRMLLRGFTPNAVTYGVLMHALC 752
L + + +G P+AVTY L+ C
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYC 663
>ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 395 bits (1014), Expect = e-107
Identities = 187/251 (74%), Positives = 219/251 (87%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPT +EIFE G QKGY H+FDVYYV I+KLG +F +ID+LL+QMKEEGIV
Sbjct: 85 LLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIV 144
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRES+F++IMK+YG+A PGQA RLLLDMR Y CEPTF+SY++ L+ILV G+CP+VA N
Sbjct: 145 FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATN 204
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML+KG+SPTV+TF +VMKALC+ NEVDSACSLLRDMTKHGCVPNSIVYQTLIHAL
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ N+V EALKLLEEMF+MGC PDV TFNDVIHGLCK N+IH+A KLVDRMLLRGF P+ +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324
Query: 723 TYGVLMHALCR 755
TYG L+H LCR
Sbjct: 325 TYGFLLHGLCR 335
Score = 114 bits (285), Expect = 4e-23
Identities = 61/159 (38%), Positives = 89/159 (55%)
Frame = +3
Query: 279 YSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDS 458
+ +P +YN+ + L A ++ EM +G P V T+A+++ LC ++
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 459 ACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIH 638
A +L +M+ G NS++Y LI AL + +V AL LL EM GC PD+ T+N +I+
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503
Query: 639 GLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GLCK +RI EA +L MLL G N VTY L+HAL R
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542
Score = 100 bits (248), Expect = 7e-19
Identities = 61/229 (26%), Positives = 109/229 (47%)
Frame = +3
Query: 69 GYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQA 248
G++ Y +L+ L + + L+ +M G + +++ +A L +A
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444
Query: 249 TRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMK 428
+L +M A YN + L VA N+ EM KG P ++T+ ++
Sbjct: 445 GLVLHEM-SARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503
Query: 429 ALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTP 608
LC V+ +D A L +M G V N++ Y TLIHAL + +AL L+ +M GCT
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTL 563
Query: 609 DVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
D T+N +I CK I + +L ++M++ G + ++ ++++ LC+
Sbjct: 564 DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Score = 89.4 bits (220), Expect = 1e-15
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Frame = +3
Query: 90 VYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALP--GQATRLLL 263
+Y LI L + +V LL +M +G + LF YG + +A RL
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGC--KPDLFTYNSLIYGLCKVDRIDEAFRLFH 519
Query: 264 DMR--GAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALC 437
+M GA + T YN + L+ + A + +ML +G + T+ ++KA C
Sbjct: 520 NMLLDGAVANNVT---YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFC 576
Query: 438 LVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVD 617
V ++ L M G ++I +I+ L KV +VD A + L + G PD+
Sbjct: 577 KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636
Query: 618 TFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
T+N V++GLCK RI EA L DR+ + G P+A TY + C+
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682
Score = 84.3 bits (207), Expect = 4e-14
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KG + Y LI L + + RL M +G V + ++ R +
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548
Query: 246 ATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAV 419
A L+ DM RG C +YN + + ++ +M+ G+ + +
Sbjct: 549 ALTLVNDMLFRG---CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNI 605
Query: 420 VMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMG 599
++ LC V +VD+A LRD G VP+ + Y ++++ L KV R+ EAL L + + + G
Sbjct: 606 MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665
Query: 600 CTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
PD T+N I CK +++A R + GF P+ +T+ VL++ L +
Sbjct: 666 VRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717
>ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 395 bits (1014), Expect = e-107
Identities = 187/251 (74%), Positives = 219/251 (87%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDVPT +EIFE G QKGY H+FDVYYV I+KLG +F +ID+LL+QMKEEGIV
Sbjct: 85 LLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIV 144
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRES+F++IMK+YG+A PGQA RLLLDMR Y CEPTF+SY++ L+ILV G+CP+VA N
Sbjct: 145 FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATN 204
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML+KG+SPTV+TF +VMKALC+ NEVDSACSLLRDMTKHGCVPNSIVYQTLIHAL
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
+ N+V EALKLLEEMF+MGC PDV TFNDVIHGLCK N+IH+A KLVDRMLLRGF P+ +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324
Query: 723 TYGVLMHALCR 755
TYG L+H LCR
Sbjct: 325 TYGFLLHGLCR 335
Score = 114 bits (285), Expect = 4e-23
Identities = 61/159 (38%), Positives = 89/159 (55%)
Frame = +3
Query: 279 YSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDS 458
+ +P +YN+ + L A ++ EM +G P V T+A+++ LC ++
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 459 ACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIH 638
A +L +M+ G NS++Y LI AL + +V AL LL EM GC PD+ T+N +I+
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503
Query: 639 GLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GLCK +RI EA +L MLL G N VTY L+HAL R
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542
Score = 100 bits (248), Expect = 7e-19
Identities = 61/229 (26%), Positives = 109/229 (47%)
Frame = +3
Query: 69 GYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQA 248
G++ Y +L+ L + + L+ +M G + +++ +A L +A
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444
Query: 249 TRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMK 428
+L +M A YN + L VA N+ EM KG P ++T+ ++
Sbjct: 445 GLVLHEM-SARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503
Query: 429 ALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTP 608
LC V+ +D A L +M G V N++ Y TLIHAL + +AL L+ +M GCT
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTL 563
Query: 609 DVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
D T+N +I CK I + +L ++M++ G + ++ ++++ LC+
Sbjct: 564 DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Score = 89.4 bits (220), Expect = 1e-15
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Frame = +3
Query: 90 VYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALP--GQATRLLL 263
+Y LI L + +V LL +M +G + LF YG + +A RL
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGC--KPDLFTYNSLIYGLCKVDRIDEAFRLFH 519
Query: 264 DMR--GAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALC 437
+M GA + T YN + L+ + A + +ML +G + T+ ++KA C
Sbjct: 520 NMLLDGAVANNVT---YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFC 576
Query: 438 LVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVD 617
V ++ L M G ++I +I+ L KV +VD A + L + G PD+
Sbjct: 577 KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636
Query: 618 TFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
T+N V++GLCK RI EA L DR+ + G P+A TY + C+
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682
Score = 83.6 bits (205), Expect = 7e-14
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Frame = +3
Query: 66 KGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQ 245
KG + Y LI L + + RL M +G V + ++ R +
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548
Query: 246 ATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAV 419
A L+ DM RG C +YN + + ++ +M+ G+ + +
Sbjct: 549 ALTLVNDMLFRG---CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNI 605
Query: 420 VMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMG 599
++ LC V +VD+A LRD G VP+ + Y ++++ L KV R+ EAL L + + + G
Sbjct: 606 MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665
Query: 600 CTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
PD T+N I CK +++A R + GF P+ +T+ VL++ L +
Sbjct: 666 VRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717
>ref|XP_006380898.1| hypothetical protein POPTR_0006s01700g [Populus trichocarpa]
gi|550335238|gb|ERP58695.1| hypothetical protein
POPTR_0006s01700g [Populus trichocarpa]
Length = 576
Score = 385 bits (990), Expect = e-105
Identities = 185/236 (78%), Positives = 208/236 (88%)
Frame = +3
Query: 36 MEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMK 215
MEIF+WAGAQKGY HSF VYY+LIDKLG A F VIDRLL+QMKEEGIVFRESLFILIMK
Sbjct: 1 MEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMK 60
Query: 216 YYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGIS 395
YYGRA LPGQATRLLLDM+G Y CEP+FRSYNV LD+LV G+CP VA NVFY+ML+KG+S
Sbjct: 61 YYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVS 120
Query: 396 PTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKL 575
P YTF +VMKALC+VNEVD+AC LLRDMTKHGCVPNS++YQTLI AL K +RVDEALKL
Sbjct: 121 PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKL 180
Query: 576 LEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMH 743
LEEMFLMGC PDV+TFN VI+G C+ NR+ E AKLVDRM+L+GFTPN +TYG LMH
Sbjct: 181 LEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMH 236
Score = 107 bits (267), Expect = 4e-21
Identities = 52/149 (34%), Positives = 83/149 (55%)
Frame = +3
Query: 306 YNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMT 485
YN + L A ++F EM +KG P ++TF ++ LC V+E++ A +L RDM
Sbjct: 307 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 366
Query: 486 KHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIH 665
G + NS+ + TLIHA + + EALKL+ +M GC D T+N +I LCK +
Sbjct: 367 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 426
Query: 666 EAAKLVDRMLLRGFTPNAVTYGVLMHALC 752
+ L + M+ +G TP+ +T +L++ C
Sbjct: 427 KGLGLFEEMIRKGLTPSIITCNILINGFC 455
Score = 97.1 bits (240), Expect = 6e-18
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Frame = +3
Query: 60 AQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALP 239
+ KG + + LI L E L M EG++ F ++ + R
Sbjct: 331 SSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEI 390
Query: 240 GQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTF 413
+A +L+ DM RG E T YN + L + +F EM+ KG++P++ T
Sbjct: 391 QEALKLVNDMLFRGCPLDEIT---YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITC 447
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ C +V +A +RDM G P+ + Y +LI+ L K R+ EAL L E++
Sbjct: 448 NILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQA 507
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMH 743
G PD T+N +I LC+ +A L+ R + GF PN VT+ +L++
Sbjct: 508 EGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVY 557
Score = 95.9 bits (237), Expect = 1e-17
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 6/228 (2%)
Frame = +3
Query: 90 VYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLL--L 263
+Y LID L + + +LL +M G + F ++ + R + +L+ +
Sbjct: 160 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 219
Query: 264 DMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLN----KGISPTVYTFAVVMKA 431
++G + T+ Y + LV G C K E++N KG P + T+ +++
Sbjct: 220 ILKGFTPNDMTY-GYLMHGFTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 278
Query: 432 LCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPD 611
C +++ A +LR+M G N++ Y LI AL K ++ EAL + EM GC PD
Sbjct: 279 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 338
Query: 612 VDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ TFN +I GLC+ + + +A L M+L G N+VT+ L+HA R
Sbjct: 339 IFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLR 386
Score = 86.7 bits (213), Expect = 8e-15
Identities = 43/128 (33%), Positives = 69/128 (53%)
Frame = +3
Query: 372 EMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVN 551
+ML +G T+ ++KALC V+ L +M + G P+ I LI+
Sbjct: 399 DMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG 458
Query: 552 RVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYG 731
+V AL+ + +M G +PD+ T+N +I+GLCK RI EA L +++ G P+++TY
Sbjct: 459 KVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYN 518
Query: 732 VLMHALCR 755
L+ LCR
Sbjct: 519 TLICWLCR 526
>ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312444|gb|EFH42868.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 724
Score = 382 bits (981), Expect = e-104
Identities = 182/251 (72%), Positives = 217/251 (86%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDV TSME+F W G+QKGYRHSFDVY VLI KLG EF IDRLL+QMK+EGIV
Sbjct: 78 LLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIV 137
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFI IM+ Y +A PGQ TRL+L+MR YSCEPTF+SYNV L+ILV+G+C KVA N
Sbjct: 138 FKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAAN 197
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++ I PT++TF VVMKALC VNEVDSA S+LRDMTKHGCVPNS++YQTLIH+L
Sbjct: 198 VFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLS 257
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV+EAL+LLEEMFLMGC PD +TFNDVI GLCK++RI+EAAK+V+RML+RGFTP+ +
Sbjct: 258 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDI 317
Query: 723 TYGVLMHALCR 755
TYG LM+ LC+
Sbjct: 318 TYGYLMNGLCK 328
Score = 111 bits (278), Expect = 2e-22
Identities = 59/166 (35%), Positives = 88/166 (53%)
Frame = +3
Query: 258 LLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALC 437
LL+ A +P +N + H A +F EM KG P VYTF ++ LC
Sbjct: 440 LLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499
Query: 438 LVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVD 617
V+E+ A LLRDM G V N++ Y TLI+A + + EA KL+ EM G D
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI 559
Query: 618 TFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
T+N +I GLC+ + +A L ++ML G P++++ +L++ LCR
Sbjct: 560 TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCR 605
Score = 110 bits (274), Expect = 7e-22
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
Frame = +3
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTF 413
A +L DM +Y P +YN L+ G+ K +A V +M NKG P VY++
Sbjct: 366 AKAVLSDMVTSYGIVPDVCTYNS----LIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSY 421
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ C + ++D A +LL +M+ G PN++ + LI A K +R+ EA+++ EM
Sbjct: 422 TILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 481
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC PDV TFN +I GLC+ + I A L+ M+ G N VTY L++A R
Sbjct: 482 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535
Score = 97.8 bits (242), Expect = 4e-18
Identities = 54/151 (35%), Positives = 82/151 (54%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN ++ + K A + EM+ +G T+ ++K LC EVD A SL M
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G VP+SI LI+ L + V+EA++ +EM L G TPD+ TFN +I+GLC+ RI
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ + ++ G P+ VTY LM LC+
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675
Score = 95.1 bits (235), Expect = 2e-17
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Frame = +3
Query: 219 YGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNK---- 386
Y + L G A +L DMR C+P SY ILV G C + Y +LN+
Sbjct: 393 YWKKGLVGLALEVLRDMRNK-GCKPNVYSYT----ILVDGFCKLGKIDEAYNLLNEMSAD 447
Query: 387 GISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEA 566
G+ P F ++ A C + + A + R+M + GC P+ + +LI L +V+ + A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507
Query: 567 LKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHA 746
L LL +M G + T+N +I+ + I EA KLV+ M+ +G + +TY L+
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567
Query: 747 LCR 755
LCR
Sbjct: 568 LCR 570
Score = 90.5 bits (223), Expect = 6e-16
Identities = 64/244 (26%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Frame = +3
Query: 24 VPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFI 203
+P ++EIF +KG + + LI L E E LL M EG+V +
Sbjct: 469 IPEAVEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527
Query: 204 LIMKYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEM 377
++ + R +A +L+ +M +G+ E T+ S + + AG K A ++F +M
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS--LIKGLCRAGEVDK-ARSLFEKM 584
Query: 378 LNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRV 557
L G+ P+ + +++ LC V+ A ++M G P+ + + +LI+ L + R+
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644
Query: 558 DEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVL 737
++ L + ++ G PD T+N ++ LCK +++A L+D + GF PN T+ +L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704
Query: 738 MHAL 749
+ +L
Sbjct: 705 LQSL 708
Score = 78.2 bits (191), Expect = 3e-12
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 32/251 (12%)
Frame = +3
Query: 99 VLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGA 278
V++ L E + +L M + G V ++ ++ + +A +LL +M
Sbjct: 216 VVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF-L 274
Query: 279 YSCEPTFRSYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDS 458
C P ++N + L A + ML +G +P T+ +M LC + VD+
Sbjct: 275 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDA 334
Query: 459 ACSL-------------------------------LRDM-TKHGCVPNSIVYQTLIHALY 542
A L L DM T +G VP+ Y +LI+ +
Sbjct: 335 AKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 394
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K V AL++L +M GC P+V ++ ++ G CK +I EA L++ M G PN V
Sbjct: 395 KKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTV 454
Query: 723 TYGVLMHALCR 755
+ L+ A C+
Sbjct: 455 GFNCLISAFCK 465
>ref|XP_006279545.1| hypothetical protein CARUB_v10028516mg [Capsella rubella]
gi|482548249|gb|EOA12443.1| hypothetical protein
CARUB_v10028516mg [Capsella rubella]
Length = 728
Score = 382 bits (980), Expect = e-104
Identities = 180/251 (71%), Positives = 216/251 (86%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPLDV TSME+F W G+QKGYRHSFDVY VLI KLG EF +DRLL+QMK+EGIV
Sbjct: 82 LLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLISKLGANGEFKTVDRLLMQMKDEGIV 141
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
FRESLFI IM+ YG+A PGQ TRL+L+MR +SCEPTF+SYNV L+ILVAG+C KVA N
Sbjct: 142 FRESLFISIMRDYGKAGFPGQTTRLMLEMRSVFSCEPTFKSYNVVLEILVAGNCHKVAAN 201
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++ I PT++TF VVMKA C VNE+DS SLLRDMTKHGCVPNS++YQTLIH+L
Sbjct: 202 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSVLSLLRDMTKHGCVPNSVIYQTLIHSLS 261
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV+E+L+LLEEMFLMGCTPD +TFNDVI GLCK++RI+EAAK+V+RML+RGF P+ +
Sbjct: 262 KCNRVNESLQLLEEMFLMGCTPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDI 321
Query: 723 TYGVLMHALCR 755
TYG LM+ LC+
Sbjct: 322 TYGYLMNGLCK 332
Score = 109 bits (272), Expect = 1e-21
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 4/174 (2%)
Frame = +3
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTF 413
A +L DM +Y +P ++N L+ G+ K +A V +M NKG P VY++
Sbjct: 370 AKAILSDMVSSYGIDPDVCTFNS----LIYGYWKKGLVGIALEVLRDMRNKGCKPNVYSY 425
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ C + ++D A ++L DM+ G N++ Y LI A K +R+ EA+++ EM
Sbjct: 426 TILVDGFCKLGKIDEAYNVLNDMSADGLKLNTVGYNCLISAFCKEHRIPEAVEIFREMPR 485
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC PDV TFN +I GLC+ + I A L M+ G N VTY L++A R
Sbjct: 486 KGCKPDVYTFNSLISGLCEVDEIEHALWLQRDMISEGVVANTVTYNTLINAFLR 539
Score = 108 bits (271), Expect = 2e-21
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Frame = +3
Query: 219 YGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALD------------------------- 323
Y + L G A +L DMR C+P SY + +D
Sbjct: 397 YWKKGLVGIALEVLRDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNDMSADGLKL 455
Query: 324 ------ILVAGHCPK----VAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLL 473
L++ C + A +F EM KG P VYTF ++ LC V+E++ A L
Sbjct: 456 NTVGYNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIEHALWLQ 515
Query: 474 RDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKY 653
RDM G V N++ Y TLI+A + + EA KL+ EM G D T+N +I GLC+
Sbjct: 516 RDMISEGVVANTVTYNTLINAFLRRGDIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 575
Query: 654 NRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ +A L ++ML G P++++ +L++ LCR
Sbjct: 576 GEVDKARSLFEKMLRDGLVPSSISCNILINGLCR 609
Score = 98.2 bits (243), Expect = 3e-18
Identities = 53/151 (35%), Positives = 82/151 (54%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN ++ + K A + EM+ +G T+ ++K LC EVD A SL M
Sbjct: 529 TYNTLINAFLRRGDIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 588
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G VP+SI LI+ L + V+EA++ +EM L G TPD+ T+N +I+GLC+ RI
Sbjct: 589 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTYNSLINGLCRAGRI 648
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ + ++ G P+ VTY LM LC+
Sbjct: 649 EDGVAMFKKLQAEGIKPDTVTYNTLMSWLCK 679
Score = 89.4 bits (220), Expect = 1e-15
Identities = 64/244 (26%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Frame = +3
Query: 24 VPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFI 203
+P ++EIF +KG + + LI L E E L M EG+V +
Sbjct: 473 IPEAVEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIEHALWLQRDMISEGVVANTVTYN 531
Query: 204 LIMKYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEM 377
++ + R +A +L+ +M +G+ E T+ S + + AG K A ++F +M
Sbjct: 532 TLINAFLRRGDIKEARKLVNEMVFQGSPLDEITYNS--LIKGLCRAGEVDK-ARSLFEKM 588
Query: 378 LNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRV 557
L G+ P+ + +++ LC V+ A ++M G P+ + Y +LI+ L + R+
Sbjct: 589 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTYNSLINGLCRAGRI 648
Query: 558 DEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVL 737
++ + + +++ G PD T+N ++ LCK ++EA L+D + GF PN T+ +L
Sbjct: 649 EDGVAMFKKLQAEGIKPDTVTYNTLMSWLCKGGYVYEACLLLDEGIEDGFVPNDRTWSIL 708
Query: 738 MHAL 749
+ +L
Sbjct: 709 LRSL 712
Score = 69.7 bits (169), Expect = 1e-09
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Frame = +3
Query: 129 EFNVIDRLLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSY 308
E + + LL M + G V ++ ++ + ++ +LL +M C P ++
Sbjct: 230 EIDSVLSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNESLQLLEEMF-LMGCTPDAETF 288
Query: 309 NVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTK 488
N + L A + ML +G +P T+ +M LC + VD+A L + K
Sbjct: 289 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFFRVPK 348
Query: 489 HGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLM-GCTPDVDTFNDVIHG-------- 641
PN +++ TLIH +R+D+A +L +M G PDV TFN +I+G
Sbjct: 349 ----PNVLIFNTLIHGFVTHDRLDDAKAILSDMVSSYGIDPDVCTFNSLIYGYWKKGLVG 404
Query: 642 ---------------------------LCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLM 740
CK +I EA +++ M G N V Y L+
Sbjct: 405 IALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNDMSADGLKLNTVGYNCLI 464
Query: 741 HALCR 755
A C+
Sbjct: 465 SAFCK 469
>ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product
[Arabidopsis thaliana] gi|332010486|gb|AED97869.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 730
Score = 376 bits (965), Expect = e-102
Identities = 178/251 (70%), Positives = 214/251 (85%)
Frame = +3
Query: 3 LLELPLDVPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIV 182
LLELPL+V TSME+F W G+Q GYRHSFDVY VLI KLG EF IDRLL+QMK+EGIV
Sbjct: 84 LLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIV 143
Query: 183 FRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPKVAPN 362
F+ESLFI IM+ Y +A PGQ TRL+L+MR YSCEPTF+SYNV L+ILV+G+C KVA N
Sbjct: 144 FKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAAN 203
Query: 363 VFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALY 542
VFY+ML++ I PT++TF VVMKA C VNE+DSA SLLRDMTKHGCVPNS++YQTLIH+L
Sbjct: 204 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLS 263
Query: 543 KVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAV 722
K NRV+EAL+LLEEMFLMGC PD +TFNDVI GLCK++RI+EAAK+V+RML+RGF P+ +
Sbjct: 264 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDI 323
Query: 723 TYGVLMHALCR 755
TYG LM+ LC+
Sbjct: 324 TYGYLMNGLCK 334
Score = 109 bits (272), Expect = 1e-21
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 35/214 (16%)
Frame = +3
Query: 219 YGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALD------------------------- 323
Y + L G A +L DMR C+P SY + +D
Sbjct: 399 YWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 324 ------ILVAGHCPK----VAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLL 473
L++ C + A +F EM KG P VYTF ++ LC V+E+ A LL
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 474 RDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKY 653
RDM G V N++ Y TLI+A + + EA KL+ EM G D T+N +I GLC+
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 654 NRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ +A L ++ML G P+ ++ +L++ LCR
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Score = 108 bits (271), Expect = 2e-21
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Frame = +3
Query: 246 ATRLLLDMRGAYSCEPTFRSYNVALDILVAGHCPK----VAPNVFYEMLNKGISPTVYTF 413
A +L DM +Y P +YN L+ G+ + +A V ++M NKG P VY++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNS----LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 414 AVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
+++ C + ++D A ++L +M+ G PN++ + LI A K +R+ EA+++ EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC PDV TFN +I GLC+ + I A L+ M+ G N VTY L++A R
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Score = 93.2 bits (230), Expect = 9e-17
Identities = 51/151 (33%), Positives = 81/151 (53%)
Frame = +3
Query: 303 SYNVALDILVAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDM 482
+YN ++ + K A + EM+ +G T+ ++K LC EVD A SL M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 483 TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRI 662
+ G P++I LI+ L + V+EA++ +EM L G TPD+ TFN +I+GLC+ RI
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 663 HEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
+ + ++ G P+ VT+ LM LC+
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 89.0 bits (219), Expect = 2e-15
Identities = 64/244 (26%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Frame = +3
Query: 24 VPTSMEIFEWAGAQKGYRHSFDVYYVLIDKLGEAREFNVIDRLLVQMKEEGIVFRESLFI 203
+P ++EIF +KG + + LI L E E LL M EG+V +
Sbjct: 475 IPEAVEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 204 LIMKYYGRAALPGQATRLLLDM--RGAYSCEPTFRSYNVALDILVAGHCPKVAPNVFYEM 377
++ + R +A +L+ +M +G+ E T+ S + + AG K A ++F +M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS--LIKGLCRAGEVDK-ARSLFEKM 590
Query: 378 LNKGISPTVYTFAVVMKALCLVNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALYKVNRV 557
L G +P+ + +++ LC V+ A ++M G P+ + + +LI+ L + R+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 558 DEALKLLEEMFLMGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVL 737
++ L + ++ G PD TFN ++ LCK +++A L+D + GF PN T+ +L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 738 MHAL 749
+ ++
Sbjct: 711 LQSI 714
Score = 77.8 bits (190), Expect = 4e-12
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 32/234 (13%)
Frame = +3
Query: 150 LLVQMKEEGIVFRESLFILIMKYYGRAALPGQATRLLLDMRGAYSCEPTFRSYNVALDIL 329
LL M + G V ++ ++ + +A +LL +M C P ++N + L
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF-LMGCVPDAETFNDVILGL 297
Query: 330 VAGHCPKVAPNVFYEMLNKGISPTVYTFAVVMKALCLVNEVDSACSL------------- 470
A + ML +G +P T+ +M LC + VD+A L
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 471 ------------------LRDM-TKHGCVPNSIVYQTLIHALYKVNRVDEALKLLEEMFL 593
L DM T +G VP+ Y +LI+ +K V AL++L +M
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 594 MGCTPDVDTFNDVIHGLCKYNRIHEAAKLVDRMLLRGFTPNAVTYGVLMHALCR 755
GC P+V ++ ++ G CK +I EA +++ M G PN V + L+ A C+
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471