BLASTX nr result
ID: Paeonia23_contig00017939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00017939
(569 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 311 8e-83
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 308 9e-82
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 304 1e-80
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 303 3e-80
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 302 4e-80
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 302 4e-80
gb|ACQ99762.1| RNA polymerase IV, partial [Heliosperma veselskyi... 301 8e-80
gb|ACQ99761.1| RNA polymerase IV, partial [Heliosperma pusillum] 301 8e-80
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 301 1e-79
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 301 1e-79
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum... 301 1e-79
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob... 300 2e-79
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob... 300 2e-79
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 300 2e-79
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 299 4e-79
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub... 296 2e-78
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a... 296 3e-78
gb|ACQ99759.1| RNA polymerase IV, partial [Heliosperma macranthum] 295 6e-78
gb|ACQ99760.1| RNA polymerase IV, partial [Heliosperma macranthum] 295 7e-78
gb|ACP41914.1| RNA polymerase IV, partial [Heliosperma macranthum] 291 6e-77
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 311 bits (797), Expect = 8e-83
Identities = 153/197 (77%), Positives = 169/197 (85%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ K+++FKG D+TFQSLLDKG+ EDC TAWGIKYL ++ +P
Sbjct: 649 PLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL-LKGHDDPPV 707
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ
Sbjct: 708 KYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 767
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTMI+DCLGKP + P+PE+FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 768 LYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMN 827
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEHIRSY
Sbjct: 828 RASLERGMFRSEHIRSY 844
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 308 bits (788), Expect = 9e-82
Identities = 149/189 (78%), Positives = 165/189 (87%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI++FKGG+Y F SLLDKG+ EDCCTAWGIK+L + +G
Sbjct: 642 PLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPM 701
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KY+HCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQAIGFSTTNPNIRVDTLSHQ
Sbjct: 702 KYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 761
Query: 208 LYYPQRPLFRTMIADCLGKPLTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGM 29
L+YPQRPLFRTMI+DCL + PKPE FNGQNAIVAVNVHLGYNQEDSLVMNR+SLERGM
Sbjct: 762 LHYPQRPLFRTMISDCL---VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGM 818
Query: 28 FRSEHIRSY 2
FRSEHIRSY
Sbjct: 819 FRSEHIRSY 827
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 304 bits (778), Expect = 1e-80
Identities = 149/197 (75%), Positives = 163/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV+N+ KI +FKGG+ TFQSLLDKG+ EDC TAWGIK+L G
Sbjct: 653 PLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSL 712
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQAIGF TTNPNIRVDTLSHQ
Sbjct: 713 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQ 772
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRT+ +DCLGKP + PKPE +NGQNAIVAVNVHLGYNQEDSLVMN
Sbjct: 773 LYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMN 832
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEHIRSY
Sbjct: 833 RASLERGMFRSEHIRSY 849
>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
gi|462422378|gb|EMJ26641.1| hypothetical protein
PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 303 bits (775), Expect = 3e-80
Identities = 144/194 (74%), Positives = 165/194 (85%), Gaps = 5/194 (2%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ K+++ KGG +FQ LD G+ EDC TAWGIKYLFME KG
Sbjct: 653 PLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAT 712
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
K+THCELD+SFLLGLSCGIIP+ANHDHARRVLYQ++KHSQQAIGFSTTNPN+RVDTLSHQ
Sbjct: 713 KFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQ 772
Query: 208 LYYPQRPLFRTMIADCLGKP-----LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMNRSS 44
L+YPQRPLF+TM +DCLGKP + PKPE++NGQNAIVAVNVHLG+NQEDS+VMNR+S
Sbjct: 773 LHYPQRPLFQTMTSDCLGKPGRHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRAS 832
Query: 43 LERGMFRSEHIRSY 2
LERGMFRSEHIRSY
Sbjct: 833 LERGMFRSEHIRSY 846
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus sinensis]
gi|557545145|gb|ESR56123.1| hypothetical protein
CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 302 bits (774), Expect = 4e-80
Identities = 147/195 (75%), Positives = 164/195 (84%), Gaps = 6/195 (3%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVENM KI+S +G +YTFQ+LLD G+ EDCCTAWGIKYL + +
Sbjct: 644 PLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPI 703
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
K+THCELD+SFLLGLSCGIIPFANHDHARRVLYQS+KHS QAIGF TTNP+IRVDTLSHQ
Sbjct: 704 KFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQ 763
Query: 208 LYYPQRPLFRTMIADCLGKP------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMNRS 47
L+YPQRPLFRTMI+DCLGKP + P+PE +NGQNAIVAVNVHLGYNQEDSLVMNR+
Sbjct: 764 LFYPQRPLFRTMISDCLGKPGYGHNHILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRA 823
Query: 46 SLERGMFRSEHIRSY 2
SLERGMFRSEHIRSY
Sbjct: 824 SLERGMFRSEHIRSY 838
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 302 bits (774), Expect = 4e-80
Identities = 149/197 (75%), Positives = 164/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI++ KGGDY+FQSLLDKGV EDC TAWGI YLFME +
Sbjct: 469 PLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKATV 528
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLS IIPFANHDHARRVLYQSEKHSQQA+GF+TTNPNIRVDT +HQ
Sbjct: 529 KYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQ 588
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM++DCLGKP + P+ E+FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 589 LYYPQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMN 648
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEHIRSY
Sbjct: 649 RASLERGMFRSEHIRSY 665
>gb|ACQ99762.1| RNA polymerase IV, partial [Heliosperma veselskyi subsp. veselskyi]
Length = 474
Score = 301 bits (771), Expect = 8e-80
Identities = 147/197 (74%), Positives = 164/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI+ KG DY+FQ+LLDKG+ EDCCTAW IKYLFM KG
Sbjct: 91 PLLVVENLRKIKLLKGDDYSFQTLLDKGILELIGVEEEEDCCTAWEIKYLFMGDKGKGLE 150
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG+++TNPNIR+DTLSHQ
Sbjct: 151 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTNPNIRIDTLSHQ 210
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
+YYPQRPLFR++IAD LGKP PK EFFNGQNAIVAVNVHLGYNQEDS+VMN
Sbjct: 211 MYYPQRPLFRSVIADALGKPDHTLGRNQRLPKSEFFNGQNAIVAVNVHLGYNQEDSIVMN 270
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFR+EHIRSY
Sbjct: 271 RASLERGMFRTEHIRSY 287
>gb|ACQ99761.1| RNA polymerase IV, partial [Heliosperma pusillum]
Length = 443
Score = 301 bits (771), Expect = 8e-80
Identities = 147/197 (74%), Positives = 164/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI+ KG DY+FQ+LLDKG+ EDCCTAW IKYLFM KG
Sbjct: 59 PLLVVENLRKIKLLKGDDYSFQTLLDKGILELIGVEEEEDCCTAWEIKYLFMGDKGKGLE 118
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG+++TNPNIR+DTLSHQ
Sbjct: 119 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTNPNIRIDTLSHQ 178
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
+YYPQRPLFR++IAD LGKP PK EFFNGQNAIVAVNVHLGYNQEDS+VMN
Sbjct: 179 MYYPQRPLFRSVIADALGKPDHTLGRNQRLPKSEFFNGQNAIVAVNVHLGYNQEDSIVMN 238
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFR+EHIRSY
Sbjct: 239 RASLERGMFRTEHIRSY 255
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 301 bits (770), Expect = 1e-79
Identities = 147/197 (74%), Positives = 162/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV N+ KI++ KGGDY FQSLLD G+ EDC TAWG++Y+ K NP A
Sbjct: 668 PLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKADKENPPA 727
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NPN RVDT +HQ
Sbjct: 728 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQ 787
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM+AD LGKP + P+PE+FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 788 LYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMN 847
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEH+RSY
Sbjct: 848 RASLERGMFRSEHVRSY 864
>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
lycopersicum]
Length = 1217
Score = 301 bits (770), Expect = 1e-79
Identities = 147/197 (74%), Positives = 162/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV N+ KI++ KGGDY FQSLLD G+ EDC TAWG++Y+ K NP A
Sbjct: 668 PLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKENPPA 727
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NPN RVDT +HQ
Sbjct: 728 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQ 787
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM+AD LGKP + P+PE+FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 788 LYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMN 847
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEH+RSY
Sbjct: 848 RASLERGMFRSEHVRSY 864
>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
Length = 1123
Score = 301 bits (770), Expect = 1e-79
Identities = 147/197 (74%), Positives = 162/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV N+ KI++ KGGDY FQSLLD G+ EDC TAWG++Y+ K NP A
Sbjct: 662 PLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKENPPA 721
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NPN RVDT +HQ
Sbjct: 722 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQ 781
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM+AD LGKP + P+PE+FNGQ AIVAVNVHLGYNQEDSLVMN
Sbjct: 782 LYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMN 841
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEH+RSY
Sbjct: 842 RASLERGMFRSEHVRSY 858
>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 1073
Score = 300 bits (767), Expect = 2e-79
Identities = 148/197 (75%), Positives = 165/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV+N+ +I++FKG +YTFQ+LL+ G+ EDC TAW IKYL + +G
Sbjct: 634 PLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPV 693
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQAIGFSTTNPNIRVDTLSHQ
Sbjct: 694 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 753
Query: 208 LYYPQRPLFRTMIADCLGK---PL-----TPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM +DCLGK PL PKPE +NGQNAIVAVNVHLGYNQEDSLVMN
Sbjct: 754 LYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMN 813
Query: 52 RSSLERGMFRSEHIRSY 2
RSSLERGMFRSEH+RSY
Sbjct: 814 RSSLERGMFRSEHVRSY 830
>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
isoform 2 [Theobroma cacao]
Length = 961
Score = 300 bits (767), Expect = 2e-79
Identities = 148/197 (75%), Positives = 165/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV+N+ +I++FKG +YTFQ+LL+ G+ EDC TAW IKYL + +G
Sbjct: 407 PLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPV 466
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQAIGFSTTNPNIRVDTLSHQ
Sbjct: 467 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 526
Query: 208 LYYPQRPLFRTMIADCLGK---PL-----TPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM +DCLGK PL PKPE +NGQNAIVAVNVHLGYNQEDSLVMN
Sbjct: 527 LYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMN 586
Query: 52 RSSLERGMFRSEHIRSY 2
RSSLERGMFRSEH+RSY
Sbjct: 587 RSSLERGMFRSEHVRSY 603
>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1184
Score = 300 bits (767), Expect = 2e-79
Identities = 148/197 (75%), Positives = 165/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV+N+ +I++FKG +YTFQ+LL+ G+ EDC TAW IKYL + +G
Sbjct: 634 PLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPV 693
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQAIGFSTTNPNIRVDTLSHQ
Sbjct: 694 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQ 753
Query: 208 LYYPQRPLFRTMIADCLGK---PL-----TPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
LYYPQRPLFRTM +DCLGK PL PKPE +NGQNAIVAVNVHLGYNQEDSLVMN
Sbjct: 754 LYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMN 813
Query: 52 RSSLERGMFRSEHIRSY 2
RSSLERGMFRSEH+RSY
Sbjct: 814 RSSLERGMFRSEHVRSY 830
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 299 bits (765), Expect = 4e-79
Identities = 148/189 (78%), Positives = 163/189 (86%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ K+++FKG D+TFQSLLDKG+ EDC TAWGIKYL ++ +P
Sbjct: 685 PLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL-LKGHDDPPV 743
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ
Sbjct: 744 KYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 803
Query: 208 LYYPQRPLFRTMIADCLGKPLTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGM 29
LYYPQRPLFRTMI+D P+PE+FNGQ AIVAVNVHLGYNQEDSLVMNR+SLERGM
Sbjct: 804 LYYPQRPLFRTMISD------LPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGM 857
Query: 28 FRSEHIRSY 2
FRSEHIRSY
Sbjct: 858 FRSEHIRSY 866
>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
vesca subsp. vesca]
Length = 1201
Score = 296 bits (759), Expect = 2e-78
Identities = 147/197 (74%), Positives = 164/197 (83%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV+ + KI++ KG +TFQ LDKG+ EDC TAW IKYLFME++G+
Sbjct: 652 PLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKYLFMEEQGSV-V 710
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSCGIIPFANHDHARRVLYQS+KHSQQAIG+STTNPN+RVDTLSH
Sbjct: 711 KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTNPNLRVDTLSHN 770
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
L+YPQRPLFRTMIAD LGKP PKPE+FNGQNAIVAVNVHLGYNQEDS+VMN
Sbjct: 771 LHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHLGYNQEDSIVMN 830
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFRSEHIRSY
Sbjct: 831 RASLERGMFRSEHIRSY 847
>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Glycine max]
Length = 1205
Score = 296 bits (757), Expect = 3e-78
Identities = 145/197 (73%), Positives = 163/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVV N+ KI+ FK Y+FQSLLDKGV EDCCTAWG++YLF ++ G
Sbjct: 656 PLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKE-GKRSV 714
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QAIGFSTTNPNIRVDTLSHQ
Sbjct: 715 KYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQ 774
Query: 208 LYYPQRPLFRTMIADCLGKP--------LTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
L+YPQ+PLFRTM +DCLGKP + PK EF+NGQNAIVAVNVHLGYNQEDSLVMN
Sbjct: 775 LHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMN 834
Query: 52 RSSLERGMFRSEHIRSY 2
R+SL+RGMFRSEHIRSY
Sbjct: 835 RASLQRGMFRSEHIRSY 851
>gb|ACQ99759.1| RNA polymerase IV, partial [Heliosperma macranthum]
Length = 479
Score = 295 bits (755), Expect = 6e-78
Identities = 144/197 (73%), Positives = 163/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI+ KG D++FQ+LLDKG+ EDCCTAW IKYLF+ KG
Sbjct: 91 PLLVVENLRKIKLLKGDDFSFQTLLDKGILELIGVEEEEDCCTAWEIKYLFVGDKGKGLE 150
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG+++TNPNIR+DTLSHQ
Sbjct: 151 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTNPNIRIDTLSHQ 210
Query: 208 LYYPQRPLFRTMIADCLGK--------PLTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
+YYPQRPLFR++IAD LGK PK EFFNGQNAIVAVNVHLGYNQEDS+VMN
Sbjct: 211 MYYPQRPLFRSVIADALGKSDYTLGRNQRLPKSEFFNGQNAIVAVNVHLGYNQEDSIVMN 270
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFR+EHIRSY
Sbjct: 271 RASLERGMFRTEHIRSY 287
>gb|ACQ99760.1| RNA polymerase IV, partial [Heliosperma macranthum]
Length = 479
Score = 295 bits (754), Expect = 7e-78
Identities = 143/197 (72%), Positives = 163/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI+ KG D++FQ+LLDKG+ EDCCTAW IKYLF+ KG
Sbjct: 91 PLLVVENLRKIKLLKGDDFSFQTLLDKGILELIGVEEEEDCCTAWEIKYLFVGDKGKGLE 150
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG+++TNPNIR+DTLSHQ
Sbjct: 151 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTNPNIRIDTLSHQ 210
Query: 208 LYYPQRPLFRTMIADCLGK--------PLTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
+YYP+RPLFR++IAD LGK PK EFFNGQNAIVAVNVHLGYNQEDS+VMN
Sbjct: 211 MYYPZRPLFRSVIADALGKSDYTLGRNQRLPKSEFFNGQNAIVAVNVHLGYNQEDSIVMN 270
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFR+EHIRSY
Sbjct: 271 RASLERGMFRTEHIRSY 287
>gb|ACP41914.1| RNA polymerase IV, partial [Heliosperma macranthum]
Length = 475
Score = 291 bits (746), Expect = 6e-77
Identities = 143/197 (72%), Positives = 163/197 (82%), Gaps = 8/197 (4%)
Frame = -2
Query: 568 PLLVVENMPKIRSFKGGDYTFQSLLDKGVXXXXXXXXXEDCCTAWGIKYLFMEQKGNPQA 389
PLLVVEN+ KI+ KG +++FQ+LLDKG+ EDC TAW IKYLF +KG
Sbjct: 91 PLLVVENLRKIKLLKGDEFSFQTLLDKGILELIGVEEEEDCRTAWEIKYLFTGEKGKGLE 150
Query: 388 KYTHCELDVSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQ 209
KYTHCELD+SFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG++TTNPNIR+DTLSHQ
Sbjct: 151 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYATTNPNIRIDTLSHQ 210
Query: 208 LYYPQRPLFRTMIADCLGK--------PLTPKPEFFNGQNAIVAVNVHLGYNQEDSLVMN 53
+YYPQRPLFR++IAD LGK + PK EFFNGQNAIVAVNVHLGYNQEDS+VMN
Sbjct: 211 MYYPQRPLFRSVIADSLGKAGHPLGRNQILPKAEFFNGQNAIVAVNVHLGYNQEDSIVMN 270
Query: 52 RSSLERGMFRSEHIRSY 2
R+SLERGMFR+EHIRSY
Sbjct: 271 RASLERGMFRTEHIRSY 287