BLASTX nr result
ID: Paeonia23_contig00017656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00017656
(777 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Th... 350 4e-94
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 350 4e-94
ref|XP_007212150.1| hypothetical protein PRUPE_ppa012276mg [Prun... 347 3e-93
ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep... 347 4e-93
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ... 346 6e-93
ref|XP_007209677.1| hypothetical protein PRUPE_ppa012285mg [Prun... 345 8e-93
ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II su... 345 1e-92
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su... 345 1e-92
ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II su... 344 2e-92
ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II su... 344 2e-92
ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polype... 344 2e-92
ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 ... 344 2e-92
gb|AFK39298.1| unknown [Lotus japonicus] 342 7e-92
ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citr... 342 1e-91
ref|XP_007016301.1| DNA-directed RNA polymerase II isoform 5 [Th... 341 2e-91
ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Th... 338 1e-90
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 337 2e-90
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 337 2e-90
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 337 2e-90
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g... 337 3e-90
>ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
gi|508786660|gb|EOY33916.1| DNA-directed RNA polymerase
II isoform 1 [Theobroma cacao]
Length = 176
Score = 350 bits (897), Expect = 4e-94
Identities = 170/176 (96%), Positives = 173/176 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLVSKLMKDVEGTCSGRHGFVVAITGIEN+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP TA
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA 176
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449518487|ref|XP_004166273.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 176
Score = 350 bits (897), Expect = 4e-94
Identities = 171/176 (97%), Positives = 172/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAA 176
>ref|XP_007212150.1| hypothetical protein PRUPE_ppa012276mg [Prunus persica]
gi|462408015|gb|EMJ13349.1| hypothetical protein
PRUPE_ppa012276mg [Prunus persica]
Length = 176
Score = 347 bits (890), Expect = 3e-93
Identities = 169/176 (96%), Positives = 173/176 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLV+KLMKDVEGTCSG+HGFVVAITGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFV+FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP TA
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176
>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223540340|gb|EEF41911.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 347 bits (889), Expect = 4e-93
Identities = 169/176 (96%), Positives = 173/176 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPR+FGR LRENLVSKLMKDVEGTCSGRHGFVVAITGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP TA
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176
>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform X1 [Glycine
max] gi|502141876|ref|XP_004504682.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum] gi|571455285|ref|XP_006580040.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Glycine max] gi|593791778|ref|XP_007158928.1|
hypothetical protein PHAVU_002G193600g [Phaseolus
vulgaris] gi|593791780|ref|XP_007158929.1| hypothetical
protein PHAVU_002G193600g [Phaseolus vulgaris]
gi|593791782|ref|XP_007158930.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|1173137|sp|P46279.1|RPB7_SOYBN RecName:
Full=DNA-directed RNA polymerase II subunit RPB7;
Short=RNA polymerase II subunit B7
gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
gi|255626843|gb|ACU13766.1| unknown [Glycine max]
gi|558695762|gb|AHA84235.1| DNA-directed RNA polymerase
II subunit RPB7 [Phaseolus vulgaris]
gi|561032343|gb|ESW30922.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032344|gb|ESW30923.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032345|gb|ESW30924.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
Length = 176
Score = 346 bits (887), Expect = 6e-93
Identities = 168/175 (96%), Positives = 172/175 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPR+FGR LR+NLVSKLMKDVEGTCSGRHGFVVA+TGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGT 77
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAT 175
>ref|XP_007209677.1| hypothetical protein PRUPE_ppa012285mg [Prunus persica]
gi|462405412|gb|EMJ10876.1| hypothetical protein
PRUPE_ppa012285mg [Prunus persica]
Length = 176
Score = 345 bits (886), Expect = 8e-93
Identities = 169/176 (96%), Positives = 172/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLV+KLMKDVEGTCSG+HGFVVAITGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD P YTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP TA
Sbjct: 121 SGDMPYYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176
>ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum]
Length = 176
Score = 345 bits (885), Expect = 1e-92
Identities = 167/175 (95%), Positives = 172/175 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPR+FGR LR+NLVSKLMKDVEGTCSGRHGFVVA+TGIENIGKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGT 77
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAT 175
>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147841138|emb|CAN75204.1| hypothetical
protein VITISV_042914 [Vitis vinifera]
gi|297745997|emb|CBI16053.3| unnamed protein product
[Vitis vinifera]
Length = 176
Score = 345 bits (884), Expect = 1e-92
Identities = 167/176 (94%), Positives = 173/176 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LR+NLV+KL+KDVEGTCSGRHGFVVAITGIEN+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T+
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVTS 176
>ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Fragaria vesca subsp. vesca]
Length = 176
Score = 344 bits (882), Expect = 2e-92
Identities = 167/175 (95%), Positives = 172/175 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLV+KLMKDVEGTCSG+HGFVVAITGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFV+FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGT 77
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP +
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAS 175
>ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Solanum lycopersicum] gi|565385656|ref|XP_006358706.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Solanum tuberosum]
Length = 177
Score = 344 bits (882), Expect = 2e-92
Identities = 166/175 (94%), Positives = 172/175 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRE LVSKLMKDVEGTCSGRHGF+VAITGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGT 77
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGT
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGT 175
>ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polypeptide family protein
[Populus trichocarpa] gi|222846170|gb|EEE83717.1|
DNA-directed RNA polymerase II 19 kDa polypeptide family
protein [Populus trichocarpa]
Length = 176
Score = 344 bits (882), Expect = 2e-92
Identities = 168/176 (95%), Positives = 171/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPR FGR LREN+VSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
+GD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 TGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPANA 176
>ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 [Medicago truncatula]
gi|217071674|gb|ACJ84197.1| unknown [Medicago
truncatula] gi|355509557|gb|AES90699.1| DNA-directed RNA
polymerase II subunit RPB7 [Medicago truncatula]
gi|388514911|gb|AFK45517.1| unknown [Medicago
truncatula]
Length = 176
Score = 344 bits (882), Expect = 2e-92
Identities = 166/175 (94%), Positives = 172/175 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPR+FGR LR+NLVSKLMKDVEGTCSGRHGFVVA+TGIENIGKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGT 77
+GD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T
Sbjct: 121 TGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAT 175
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 342 bits (878), Expect = 7e-92
Identities = 165/173 (95%), Positives = 171/173 (98%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPR+FGR LR+NLV+KLMKDVEGTCSGRHGFVVA+TGIEN+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 83
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citrus clementina]
gi|568870408|ref|XP_006488396.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Citrus sinensis]
gi|557526854|gb|ESR38160.1| hypothetical protein
CICLE_v10029380mg [Citrus clementina]
Length = 176
Score = 342 bits (876), Expect = 1e-91
Identities = 165/175 (94%), Positives = 171/175 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRE+++SKLMKDVEGTCSGRHGFVVAIT +ENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLREHIISKLMKDVEGTCSGRHGFVVAITSVENIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGEILEAVV+MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVSMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGT 77
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP T
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTT 175
>ref|XP_007016301.1| DNA-directed RNA polymerase II isoform 5 [Theobroma cacao]
gi|508786664|gb|EOY33920.1| DNA-directed RNA polymerase
II isoform 5 [Theobroma cacao]
Length = 174
Score = 341 bits (875), Expect = 2e-91
Identities = 168/176 (95%), Positives = 171/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLVSKLMKDVEGTCSGRHGFVVAITGIEN+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGS IQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP TA
Sbjct: 121 SGDMPNYTTSDGS--IQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA 174
>ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Theobroma cacao]
gi|508786662|gb|EOY33918.1| DNA-directed RNA polymerase
II isoform 3 [Theobroma cacao]
Length = 173
Score = 338 bits (868), Expect = 1e-90
Identities = 167/176 (94%), Positives = 170/176 (96%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFGR LRENLVSKLMKDVEGTCSGRHGFVVAITGIEN+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
DGTGFVTFPVKYQCVVFRPFKGE+LEAVVTM MGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTM---MGFFAEAGPVQIFVSNHLIPDDMEFQ 117
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP TA
Sbjct: 118 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA 173
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 337 bits (865), Expect = 2e-90
Identities = 163/176 (92%), Positives = 171/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFG LR+ LVSKL+KDVEGTCSGRHGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
+GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 177
Score = 337 bits (865), Expect = 2e-90
Identities = 163/176 (92%), Positives = 171/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFG LR+ LV+KLMKDVEGTCSGRHGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
+GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 337 bits (865), Expect = 2e-90
Identities = 163/182 (89%), Positives = 174/182 (95%)
Frame = -3
Query: 619 QSQVAKMFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENI 440
+ + +MFFHI+LERNMQLHPRHFG LR+ LV+KLMKDVEGTCSGRHGFVVAITG+E+I
Sbjct: 54 EEEEEEMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDI 113
Query: 439 GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 260
GKGLIR+GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP
Sbjct: 114 GKGLIREGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 173
Query: 259 DDMEFQSGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 80
DDMEFQSGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 174 DDMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 233
Query: 79 TA 74
A
Sbjct: 234 GA 235
>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
gi|50878367|gb|AAT85142.1| putative RNA polymerase II
subunit 5 [Oryza sativa Japonica Group]
gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
protein OsI_19896 [Oryza sativa Indica Group]
gi|215704281|dbj|BAG93121.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218196761|gb|EEC79188.1| hypothetical protein
OsI_19893 [Oryza sativa Indica Group]
gi|222631528|gb|EEE63660.1| hypothetical protein
OsJ_18478 [Oryza sativa Japonica Group]
Length = 177
Score = 337 bits (864), Expect = 3e-90
Identities = 162/176 (92%), Positives = 171/176 (97%)
Frame = -3
Query: 601 MFFHIILERNMQLHPRHFGRQLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 422
MFFHI+LERNMQLHPRHFG LR+ LVSKL+KDVEGTCSGRHGFVVAITG+E++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIR 60
Query: 421 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 242
+GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 241 SGDAPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGTA 74
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176