BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00017201
         (495 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   137   4e-42
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    98   2e-31
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        105   3e-31
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    96   1e-30
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   102   2e-30
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   102   2e-30
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                102   2e-30
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               102   2e-30
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     102   4e-30
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   102   6e-30
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    93   7e-30
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    96   9e-30
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    93   9e-30
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...    95   9e-30
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   100   1e-29
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     100   1e-29
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   102   2e-29
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     101   3e-29
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         103   3e-29
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           103   3e-29

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  137 bits (344), Expect(2) = 4e-42
 Identities = 64/104 (61%), Positives = 77/104 (74%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRGVRERNLYYLKGNAVLGDIPTTNSFAK---DTTRLWHMFLAHAGEKSLYALVK 133
           G LV+++GV + NLYY +G+ V+G +    S +K   + T+LWHM L HAGEKSL    K
Sbjct: 319 GALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTK 378

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           QGLLKG   CKL+FCEHCVLGKQ RVKFGTAIH T+G LDYVHS
Sbjct: 379 QGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHS 422



 Score = 60.5 bits (145), Expect(2) = 4e-42
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +GNDNP + VGIG+I+ + HDG  R L +V +VP +  NLISLG LESKG
Sbjct: 255 MGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKG 304


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 98.2 bits (243), Expect(2) = 2e-31
 Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAKDT---TRLWHMFLAHAGEKSLYALV 136
           G+LV M G +   NLY L+G+ + G + T  + +KD    T LWHM L H  E  +  L+
Sbjct: 387 GSLVYMIGDMNSANLYVLRGSTLHGSV-TAAAVSKDEPIKTNLWHMRLGHMSELGMAELM 445

Query: 135 KQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           K+ LL G T  K+ FCEHCV GK  RVKF T++HRT+G LDYVH+
Sbjct: 446 KRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHT 490



 Score = 63.2 bits (152), Expect(2) = 2e-31
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +G+DNPR IVGIG+++ K HDGM R L +V H+P +  NLISL  L+++G
Sbjct: 323 MGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEG 372


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  105 bits (262), Expect(2) = 3e-31
 Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++ T +      D T LWHM L H  E  L  L K
Sbjct: 394 GSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 453

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 454 RGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 497



 Score = 55.5 bits (132), Expect(2) = 3e-31
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 329 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 379


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score = 95.9 bits (237), Expect(2) = 1e-30
 Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAKDT---TRLWHMFLAHAGEKSLYALV 136
           G+LV M G +   NLY L+G+ + G + T  +  KD    T LWHM L H  E  +  L+
Sbjct: 387 GSLVYMIGDMNSANLYVLRGSTLHGSV-TAAAVTKDEPSKTNLWHMRLGHMSELGMAELM 445

Query: 135 KQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           K+ LL G T   + FCEHCV GK  RVKF T++HRT+G LDYVH+
Sbjct: 446 KRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHA 490



 Score = 63.2 bits (152), Expect(2) = 1e-30
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +G+DNPR IVGIG+++ K HDGM R L +V H+P +  NLISL  L+++G
Sbjct: 323 MGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEG 372


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  102 bits (254), Expect(2) = 2e-30
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 601 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSK 660

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 661 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 704



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 536 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 586


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  102 bits (254), Expect(2) = 2e-30
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 394 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSK 453

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 454 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 497



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 329 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 379


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  102 bits (254), Expect(2) = 2e-30
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++ T +      D T LWHM L H  E  L  L  
Sbjct: 379 GSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSM 438

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 439 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 482



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 314 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 364


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  102 bits (254), Expect(2) = 2e-30
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++ T +      D T LWHM L H  E  L  L  
Sbjct: 211 GSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSM 270

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 271 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 314



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 146 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 196


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  102 bits (254), Expect(2) = 4e-30
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 303 GSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 362

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 363 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 406



 Score = 54.7 bits (130), Expect(2) = 4e-30
 Identities = 24/51 (47%), Positives = 36/51 (70%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L +V H+P++  +LISL  L+ KG
Sbjct: 238 LMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKG 288


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  102 bits (255), Expect(2) = 6e-30
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 360 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 419

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 420 RGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 463



 Score = 53.9 bits (128), Expect(2) = 6e-30
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LIS   L+ KG
Sbjct: 295 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKG 345


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score = 92.8 bits (229), Expect(2) = 7e-30
 Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAKDT---TRLWHMFLAHAGEKSLYALV 136
           G+LV M G +   NLY L+G+ + G + T  +  KD    T LWHM L H  E  +  L+
Sbjct: 387 GSLVYMIGDMNSANLYVLRGSTLHGSV-TAAAVTKDEPNKTNLWHMRLGHMSELGMAELM 445

Query: 135 KQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           K+ LL G T   + FCE CV GK  RVKF T++HRT+G LDYVH+
Sbjct: 446 KRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHA 490



 Score = 63.5 bits (153), Expect(2) = 7e-30
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +GNDNPR IVGIG+++ K HDG+ R L +V H+P +  NLISL  L+++G
Sbjct: 323 MGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEG 372


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score = 95.9 bits (237), Expect(2) = 9e-30
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAKDT---TRLWHMFLAHAGEKSLYALV 136
           G+LV M G +   NLY L+G+ + G + T  + +KD    T LWHM L H  E  +  L+
Sbjct: 384 GSLVYMIGDMNSANLYVLRGSTLHGSL-TAAAVSKDEPSKTNLWHMRLGHMSELGMAELM 442

Query: 135 KQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           K+ LL G T   + FCEHCV GK  RVKF T++HRT+G LDYVH+
Sbjct: 443 KRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHA 487



 Score = 60.1 bits (144), Expect(2) = 9e-30
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +G++NPR I+GIG+++ K HDGM R L +V H+P +  NLISL  L+++G
Sbjct: 320 MGDNNPREIMGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEG 369


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score = 93.2 bits (230), Expect(2) = 9e-30
 Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAKDT---TRLWHMFLAHAGEKSLYALV 136
           G+LV M G +   NLY L+G+ + G + T    +KD    T +WHM L H  E  +  L+
Sbjct: 282 GSLVYMIGDMNSANLYVLRGSTLHGYV-TAAVVSKDEPSKTNMWHMRLGHMSELGMAELM 340

Query: 135 KQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           K+ LL G T   + FCEHCV GK  RVKF T++HRT+G LDYVH+
Sbjct: 341 KRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHA 385



 Score = 62.8 bits (151), Expect(2) = 9e-30
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +G+DNPR IVGIG+++ K HDGM R L +V H+P +  NLISL  L+++G
Sbjct: 218 MGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEG 267


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score = 95.1 bits (235), Expect(2) = 9e-30
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAKDT---TRLWHMFLAHAGEKSLYALV 136
           G+LV M G +   NLY L+G+ + G I T  + +KD    T LWHM L H  E  +  L+
Sbjct: 327 GSLVYMIGDMNSTNLYVLRGSTLHGSI-TAAAVSKDEPSKTNLWHMRLGHMSELGMAELM 385

Query: 135 KQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           K+ LL G T   + FCEHCV GK  RVKF T++HR++G LDYVH+
Sbjct: 386 KRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRSKGILDYVHA 430



 Score = 60.8 bits (146), Expect(2) = 9e-30
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           +G+DNPR IVGI +++ K HDGM R L +V H+P +  NLISL  L+++G
Sbjct: 263 MGDDNPREIVGISSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEG 312


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  100 bits (248), Expect(2) = 1e-29
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 429 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 488

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           + LL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 489 RELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 532



 Score = 55.5 bits (132), Expect(2) = 1e-29
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 364 LMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKG 414


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  100 bits (248), Expect(2) = 1e-29
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 429 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 488

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           + LL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 489 RELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 532



 Score = 55.5 bits (132), Expect(2) = 1e-29
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL  L+ KG
Sbjct: 364 LMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKG 414


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  102 bits (255), Expect(2) = 2e-29
 Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = -1

Query: 315 RFFIGTLVVMRGVRERNLYYLKGNAVLGDIPTTNS--FAKDTTRLWHMFLAHAGEKSLYA 142
           R + G+ ++++GV    LY+L+G+ V G     +S    KD T+LWH+ L H GE+ +  
Sbjct: 369 RVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLGHMGERGMQI 428

Query: 141 LVKQGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           L K+ LL G     L+FCEHCV GK  R KF  AIHRT+GTLDY+HS
Sbjct: 429 LSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHS 475



 Score = 52.0 bits (123), Expect(2) = 2e-29
 Identities = 25/52 (48%), Positives = 35/52 (67%)
 Frame = -2

Query: 491 VGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKGSS 336
           + N +  ++VG G+I+ + HDG    L EV HVP +T NLISL +L+SKG S
Sbjct: 309 MANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFS 360


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  101 bits (252), Expect(2) = 3e-29
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMR-GVRERNLYYLKGNAVLGDIPTT--NSFAKDTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++     +    D T LWHM L H  E  L  L K
Sbjct: 366 GSLVVMKVDIKSANLYHLRGTTILGNVAAVFDSLSNSDATNLWHMRLGHMSEIGLAELSK 425

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 426 RGLLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 469



 Score = 52.8 bits (125), Expect(2) = 3e-29
 Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISL-GMLE-SKGSSI 333
           L+G+D P  + GIGT++ K+ DG IR L++V H+P++  +LISL G+L+ +KGS +
Sbjct: 314 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVQHIPNLKRSLISLYGILKVTKGSLV 369


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  103 bits (256), Expect(2) = 3e-29
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 226 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 285

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 286 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 329



 Score = 50.8 bits (120), Expect(2) = 3e-29
 Identities = 22/51 (43%), Positives = 35/51 (68%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIG ++ K+ DG I  L++V H+P++  +LISL  L+ KG
Sbjct: 161 LMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKG 211


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  103 bits (256), Expect(2) = 3e-29
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -1

Query: 303 GTLVVMRG-VRERNLYYLKGNAVLGDIPTTNSFAK--DTTRLWHMFLAHAGEKSLYALVK 133
           G+LVVM+  ++  NLY+L+G  +LG++   +      D T LWHM L H  E  L  L K
Sbjct: 226 GSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSK 285

Query: 132 QGLLKGATTCKLDFCEHCVLGKQTRVKFGTAIHRTRGTLDYVHS 1
           +GLL G +  KL FCEHC+ GK  RVKF T+ H T G LDYVHS
Sbjct: 286 RGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 329



 Score = 50.8 bits (120), Expect(2) = 3e-29
 Identities = 22/51 (43%), Positives = 35/51 (68%)
 Frame = -2

Query: 494 LVGNDNPRRIVGIGTIRFKLHDGMIRELTEVIHVPDITHNLISLGMLESKG 342
           L+G+D P  + GIG ++ K+ DG I  L++V H+P++  +LISL  L+ KG
Sbjct: 161 LMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKG 211